Canadian Journal of Microbiology

Article	Citations
Phenanthrene-degrading Sphingobium xenophagum are widely distributed in the western Pacific Ocean	41
Investigating the spatiotemporal dynamics of apple tree phyllosphere bacterial and fungal communities across cultivars in orchards	39
Potential selection and maintenance of manure-originated multi-drug resistant plasmids at sub-clinical concentrations for tetracycline family antibiotics	28
Evidence that nano-TiO2 induces acute cytotoxicity to the agronomically beneficial nitrogen-fixing bacteria Sinorhizobium meliloti	20
Spatial arrangement and density variations in the cell envelope of Deinococcus radiodurans	18
Distribution of corrosive microbial communities in rust layers of steel immersed in seawater	18
LuxS modulates motility and secretion of extracellular protease in fish pathogen Vibrio harveyi	16
High-throughput sequencing reveals microbial community dynamics in two treatment systems for oil field-produced water	14
Regulation of virulence mechanisms in plant-pathogenic Streptomyces	14
What in Earth? Analyses of Canadian soil populations of Aspergillus fumigatus	13
Naming new taxa of prokaryotes in the 21st century	12
Update on the genus Robertmurraya: a bacterial genus honoring Dr. Robert G.E. Murray (with some personal reminiscences)	12
Surveillance of Clostridioides difficile in Canadian retail meat and genomic linkages to community-associated human clinical infections in Canada	12
Microbial biodiversity of agricultural surface waters in Ontario, Canada	11
A duplex real-time NASBA assay targeting a serotype-specific gene for rapid detection of viable Salmonella Paratyphi C in retail foods of animal origin	11
Unveiling the fungal color palette: pigment analysis of Fusarium solani species complex and Curvularia verruculosa clinical isolates	11
Analysis of bacterioplankton genes in an impaired Great Lakes harbour reveals seasonal metabolic shifts and a previously undetected cyanobacterium	10
Cecal microbiome in broiler chicken related to antimicrobial feeding and bird’s sex	10
Examination of the horizontal gene transfer dynamics of an integrative and conjugative element encoding multidrug resistance in Histophilus somni	10
A metagenomic study of the bacteria in snow algae microbiomes	9
Proceedings of the Dual Use Research of Concern Panel Discussion: challenges and perspectives	9
Diversity and distribution characteristics of myxobacteria in the rhizosphere and nonrhizosphere soils of the halophyte Haloxylon ammodendron in the high saline-alkaline Ebinur Lake Wetland	9
A β-amino-ketone that disrupts the fungal plasma membrane exhibits potent activity against pathogenic Trichophyton species	8
M13 bacteriophage as a versatile platform for the creation of new materials via genetic engineering	8
Rapid identification of Fusarium species causing head blight in Canada using MALDI-TOF mass spectrometry	8

Exploring the Multifaceted Roles of Trichoderma Secondary Metabolites	8
Investigation of phage and molasses interactions for the biocontrol of E. coli O157:H7	8
Polymerase chain reaction-based typing methods and protein profiling analysis of Acinetobacter baumannii isolated from environmental and clinical sources from South India	8
Robert G.E. Murray: the consummate editor	8
Yeast communities before and after spontaneous fermentation of wine grapes: a case study from Nova Scotia	8
The application of shrub willow chip organic amendments impacts soil microbial community dynamics	7
Lettuce seed pelleting with Pseudomonas sp. 31-12: plant growth promotion under laboratory and greenhouse conditions	7
High prevalence of Candida species in the respiratory tract of patients diagnosed with SARS-CoV-2	7
The scientific revolution that unraveled the astonishing DNA repair capacity of the Deinococcaceae: 40 years on	7
Genomic analysis of a new type VI secretion system in Vibrio parahaemolyticus and its implications for environmental adaptation in shrimp ponds	7
Lactoferrin modulates the biofilm formation and bap gene expression of methicillin-resistant Staphylococcus epidermidis	6
Bacterial changes and quality deterioration of freshwater shellfish Hyriopsis cumingii meat under different temperature storage	6
New insights into endophytic fungi diversity and their potential correlation with polyphyllin levels of Paris polyphylla var. yunnanensis	6
Time to treat the climate and nature crisis as one indivisible global health emergency	6
Influence of central metabolism disruption on Escherichia coli biofilm formation	6
Bacterial community structure in the rhizosphere of fungi-infected Amorphophallus titanum	6
Regulation of pyrimidine ribonucleoside salvage metabolism in Pseudomonas putida ATCC 17536	6
Identification of plasmids from Brazilian Chromobacterium violaceum strains	6
Lavandula angustifolia oil induces oxidative stress, stiffening of membranes, and cell wall in Cryptococcus spp.	6
Choice of cover crop influences soil fungal and bacterial communities in Prince Edward Island, Canada	6
Sequential markerless genetic manipulations of species from the Neisseria genus	6
Co-inoculation with novel nodule-inhabiting bacteria reduces the benefits of legume–rhizobium symbiosis	6
Prototaxites reinterpreted as mega-rhizomorphs, facilitating nutrient transport in early terrestrial ecosystems	6
Patterns of free-living and particle-attached bacteria along environmental gradients in Lake Taihu	6
Abundance of integrons in halophilic bacteria	6
Effects of Daqu properties on the microbial community and their metabolites in fermented grains in Baijiu fermentation system	6
A qualitative scan on the challenges of AMR in Canada and experts’ proposed solutions	5
Characterization and genome analysis of a broad host range lytic phage vB_SenS_TUMS_E19 against Salmonella enterica and its efficiency evaluation in the liquid egg	5
Variation in plasmid conjugation among nontyphoidal Salmonella enterica serovars	5
From patterns to prediction: machine learning and antifungal resistance biomarker discovery	5
Note of appreciation	5
Soil microbiomes from the groundnut basin of Senegal contain plant growth-promoting bacteria with potential for crop improvement in arid soils	5
Biological control of the soil-borne fungal pathogen Fusarium oxysporum f.sp. lycopersici ––a review	5
Note of appreciation	5
Computational studies on photolyase (Phr) proteins of cyanobacteria	5
Detection of the pathogenic fungus Cordyceps farinosa in the Thitarodes armoricanus soil-rearing environment based on nucleic acid targets	5
Crossing the streams: improving data quality and integration across the One Health genomics continuum with data standards and implementation strategies	5
Deep tillage reduces the dependence of tobacco (Nicotiana tabacum L.) on arbuscular mycorrhizal fungi and promotes the growth of tobacco in dryland farming	5
A graduate student's tribute to Dr. R.G.E. Murray	5
Correction: Characterization and whole-genome sequencing of an extreme arsenic tolerant Citrobacter freundii SRS1 strain isolated from Savar area in Bangladesh	5
Analysis of biofilm expansion rate of Bacillus subtilis (MTC871) on agar substrates with different stiffness	4
Isolation of lipopeptide antibiotics from Bacillus siamensis: a potential biocontrol agent for Fusarium graminearum	4
Comparative mitogenomics of Leptographium procerum, Leptographium terebrantis, and Leptographium wingfieldii, an invasive fungal species in Canadian forests	4
Deciphering the Interrelation of Gut Microbiota and BMI in Atherosclerosis: A Metagenomic Approach	4
Candidatus Thiovulum sp. strain imperiosus: the largest free-living Epsilonproteobacteraeota Thiovulum strain lives in a marine mangrove environment	4
A tail-specific protease is required for Legionella pneumophila intracellular multiplication	4
Transcriptomic analysis of iron transport mutants reveals serovar-specific adaptations in Salmonella enterica	4
Wild fish from a highly urbanized river (Orge, France) as vectors of culturable Enterobacterales resistant to antibiotics	4
Inhibition of the type IV secretion system from antibiotic-resistant Helicobacter pylori clinical isolates supports the potential of Cagα as an anti-virulence target	4
Streptococcus suis serovar 9 responses to elevated temperature and co-culture with Glaesserella parasuis	4

Somatic coliphages as bioindicators of contamination in Lake Guamuez, Colombia	4
Dr. Robert Murray: strong roots in Canadian microbiology—strong global leadership and vision	4
Overview of high pathogenicity avian influenza H5N1 clade 2.3.4.4b in wildlife from Central and South America, October 2022–September 2025	4
Three-dimensional buckling model reveals the evolution of energy-driven biofilm wrinkle morphologies	4
Microbial ecology and evolution	4
Marine-derived antimicrobial molecules from the sponges and their associated bacteria	3
Microbial communities in the Hudson Strait amidst rapid environmental change	3
Penicillium sanguifluum ( Penicillium section Citrina ) as a source of dehydroc	3
Plant seedlings of peas, tomatoes, and cucumbers exude compounds that are needed for growth and chemoattraction of Rhizobium leguminosarum bv. viciae 3841 and Azospirillum brasilense<	3
Role of the nonribosomal peptide synthetase siderophore enzyme (Rfs) of Mucor lusitanicus in controlling the growth of fungal phytopathogens	3
Development and evaluation of a sensitive approach for detection and recovery of third-generation cephalosporin- and carbapenem-resistant Enterobacterales from ready-to-eat frozen stone fruit	3
An epidemiological framework for improving the accuracy of whole-genome sequence-based antimicrobial resistance surveillance in Salmonella	3
Morchella capensis sp. nov., the Fynbos morel—the first description of an endemic Morchella species from Africa	3
High diversity within and low but significant genetic differentiation among geographic and temporal populations of the global Streptococcus pneumoniae	3
Chitin degradation and its effect on natural transformation: a systematic genetic study in Vibrio parahaemolyticus	3
Inhibition of Shiga Toxin-Producing Escherichia coli O157:H7 Attachment to Human Intestinal Cells by Single or Combined Lytic Bacteriophages	3
Food-borne microbes influence conjugative transfer of antimicrobial resistance plasmids in pre-disturbed gut microbiome	3
Responses of bacterial and three sub-microeukaryote communities in the water of white shrimp Penaeus vannamei aquaculture ponds in two polyculture models	3
Antimicrobial resistance in Klebsiella pneumoniae: an overview of common mechanisms and a current Canadian perspective	3
In situ biochemical characterization of Venus cloud particles using a life-signature detection microscope	3
Phenotypic and transcriptomic changes in Acinetobacter baumannii in rich and minimal growth mediums	3
Hydrogen sulfide regulates arsenic-induced cell death in yeast cells by modulating the antioxidative system	3
Assessment of viable Enterobacteriaceae and Enterococcus spp. across the agro-ecosystem of an antibiotic-free swine farm	3
The compact mitogenome of Ceratocystiopsis pallidobrunnea	3
Dr. RGE Murray: scientist, teacher, and mentor	3
VeA is involved in anti-tumor activity by regulating adenylosuccinate lyase to mediate the synthesis of Acadesine in endophytic Fusarium solani	3
Adhesion and biofilm formation by the opportunistic pathogen Candida tropicalis: what do we know?	3
Occurrence and characterization of plasmid-encoded qnr genes in quinolone-resistant bacteria across diverse aquatic environments in southern Ontario	3
Dedication of the 11th International Symposium on Avian Influenza: Dr. David Stallknecht	3
Virulence-associated genes and antimicrobial resistance patterns in bacteria isolated from pregnant and nonpregnant women with urinary tract infections: the risk of neonatal sepsis	2
Biogeochemical stability of organic covers and mine wastes under climate change simulated mesocosms	2
Engineering conjugative plasmids for inducible horizontal DNA transfer	2
Comparative lipidomics of Pichia pastoris using constitutive promoter reveals lipid diversity and variability at different growth phases	2
Phenotypic profiling supports that Listeria costaricensis lacks in vitro pathogenicity but exhibits persistence traits	2
Identification of iron-responsive genes in Proteus vulgaris	2
Needles in haystacks: monitoring the potential escape of bioaerosolised antibacterial resistance genes from wastewater treatment plants with air and phyllosphere sampling	2
Variability in biofilm formation dynamics by Salmonella enterica isolated from animal-origin foods, plant-based foods, environment, clinical, and unspecified food sources: a 3-day in vitro stud	2
Phylogenetic and genomic insights of Flavobacterium diversity in Quebec’s fish farms	2
Evaluation of transmission metrics in a slow-spreading highly pathogenic avian influenza (HPAI) outbreak in a commercial upland game bird system	2
Changes in the soil fungal communities of steppe grasslands at varying degradation levels in North China	2
RNA-seq analysis of transcription patterns during infection of Mesorhizobium japonicum by phage Cp1R7A-A1	2
Extracellular DNA enhances Pseudomonas aeruginosa biofilm resistance to sodium hypochlorite stress	2
Natural recovery from fire disturbance is more favorable than assisted recovery for the restoration of soil nematode-trapping fungi	2
Biological and genomic characteristics of three novel bacteriophages and a phage-plasmid of Klebsiella pneumoniae	2
Tracking the trajectory of frankia research through bibliometrics: trends and future directions	2
Re-evaluation of the nodulation capacity of Sphingomonas sediminicola DSM 18106 T indicates that this	2
Clinical evaluation of the GeneXpert ® Xpert ® Xpress SARS-CoV-2/Flu/RSV PLUS combination test	2
Longitudinal screening of retail milk from Canadian provinces reveals no detections of influenza A virus RNA (April–July 2024): leveraging a newly established pan-Canadian network for responding to em	2
Investigating the occurrence of antimicrobial resistance in the environment in Canada: a scoping review	2
Diversity of fungal assemblages in rhizosphere and endosphere of blueberry (Vaccinium spp.) under field conditions revealed by culturing and culture-independent molecular methods	1
Lactiplantibacillus plantarum BW2013 protects mucosal integrity and modulates gut microbiota of mice with colitis	1
Lessons from the field: Trichoderma in agriculture and human health	1
Adaptive evolution of Clostridium thermocellum ATCC 27405 on alternate carbon sources leads to altered fermentation profiles	1
QsvR and OpaR coordinately regulate the transcription of cpsS and cpsR in Vibrio parahaemolyticus	1
Highly Pathogenic Avian Influenza (HPAI H5N1, Clade 2.3.4.4b, genotype C2.1) in Commercial Ring-Necked Pheasants During the 2022 Outbreak in the United States	1
Role of an antagonistic bacterium, Bacillus subtilis PE7, in growth promotion of netted melon (Cucumis melo L. var. reticulatus Naud.)	1
Ultra-performance liquid chromatography-tandem mass spectrometry revealed the significantly different metabolic profiles of Auricularia cornea growing on weakly acidic and weakly alkaline subst	1
Bradyrhizobium japonicum FN1 produces an inhibitory substance that affects competition for nodule occupancy	1
Microbiology of barrier component analogues of a deep geological repository	1
Disruption of MAPK signalling and amino acid biosynthesis underlies the antifungal biocontrol mechanism of Coniochaeta velutina against Colletotrichum gloeosporioides: a transcriptome an	1
Do we still need Illumina sequencing data? Evaluating Oxford Nanopore Technologies R10.4.1 flow cells and the Rapid v14 library prep kit for Gram negative bacteria whole genome assemblies	1
Osmotic stress tolerance and virulence of Salmonella enterica Tennessee and Serogroup B strains from low-moisture foods	1
Prairie soil improves wheat establishment and accelerates the developmental transition to flowering compared to agricultural soils	1
Microbiome profiling suggests novel endosymbiont associations of insect pests of stored grain	1
Effect of rapeseed straw-derived biochar on soil bacterial community structure at tillering stage of Oryza Sativa	1
How to teach life sciences students about dual-use research—a view from the field	1
When DNA writing is free: open tools and strategies to accelerate the bioeconomy	1
Spatial variability of bacterial community compositions in the Mariana Trench	1
A review of antimicrobial resistance in imported foods	1
Positive regulation of the MarR-type regulator slnO and improvement of salinomycin production by Streptomyces albus by multiple transcriptional regulation	1
Seasonal changes in the abundance and activity of bacterial and fungal denitrifying communities associated with different compost amendments	1
Inhibitory relationships of resident bacteria isolated from the mantle fluids of Crassostrea virginica	1
Enterococci as a One Health indicator of antimicrobial resistance	1
Loop-mediated isothermal amplification (LAMP) assay for rapid detection of viable but non-culturable Vibrio cholerae O1	1
Impact of inoculation of the sap collection system with three Pseudomonadota strains on maple syrup microbial and organoleptic quality	1
Functional profiles and organochlorine degradation potential in microbial communities of tropical epilithic biofilms: a case study in Guadeloupe (Lesser Antilles)	1
Avian influenza situation report—Africa	1
Requirements and considerations for effective implementation of integrated One Health antimicrobial resistance research	1
Identification, characterization and pathogenicity of Colletotrichum asianum, C. fructicola, and C. laticiphilum causing mango anthracnose in Vietnam	1
Constraint on boric acid resistance and tolerance evolvability in Candida albicans	1

Integrated genomic approaches improve Treponema pallidum phylogenetics and lineage classification	1
Isolation of Marine Bacteria through a “Bait” Approach	1
Salicylic acids and pathogenic bacteria: new perspectives on an old compound	1
Phosphatidylinositol-specific phospholipase C can decrease Müller cell viability and suppress its phagocytic activity by modulating PI3K/AKT signaling pathway	1
Effects of short-term exposure to simulated microgravity on the physiology of Bacillus subtilis and multiomic analysis	1
Metallo-beta-lactamase-producing Escherichia coli in the sewage of Mexico City: where do they come from?	1
Note of appreciation	1
Effect of cannabidiol (CBD), a cannabis plant derivative, against Candida albicans growth and biofilm formation	1
AcsS inhibits the hemolytic activity and thermostable direct hemolysin (TDH) gene expression in Vibrio parahaemolyticus	1
Neighbours in nodules: the interactions between Frankia sp. ACN10a and non-Frankia nodular endophytes of alder	1
Diversity of soil fungi in the vineyards of Changli region in China	1
DNA repair and oxidative stress defense systems in radiation-resistant Deinococcus murrayi	1