OOIR: Observatory of International Research

Papers

(The TQCC of Canadian Journal of Microbiology is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-05-01 to 2024-05-01.)

Article	Citations
Dengue virus: epidemiology, biology, and disease aetiology	102
It takes three to tango: the importance of microbes, host plant, and soil management to elucidate manipulation strategies for the plant microbiome	48
Antibacterial and antibiofilm effects of α-humulene against Bacteroides fragilis	38
Functional potential differences between Firmicutes and Proteobacteria in response to manure amendment in a reclaimed soil	34
d-Amino acids in antimicrobial peptides: a potential approach to treat and combat antimicrobial resistance	33
A review of the taxonomy, genetics, and biology of the genus Escherichia and the type species Escherichia coli	28
Crop, genotype, and field environmental conditions shape bacterial and fungal seed epiphytic microbiomes	27
Organic acids and root exudates of Brachypodium distachyon: effects on chemotaxis and biofilm formation of endophytic bacteria	24
In vitro degradation of low-density polyethylene by new bacteria from larvae of the greater wax moth, Galleria mellonella	24
Preliminary screening of rhizobacteria for biocontrol of little seed canary grass (Phalaris minor Retz.) and wild oat (Avena fatua L.) in wheat	20
Potential impact of SARS-CoV-2 infection on the thymus	17
Keeping the microbiology lab alive: essential microbiology lab skill development in the wake of COVID-19	16
Proteomics of host–bacterial interactions: new insights from dual perspectives	15
The yeast, the antifungal, and the wardrobe: a journey into antifungal resistance mechanisms ofCandida tropicalis	15
Recombinase polymerase amplification in the molecular diagnosis of microbiological targets and its applications	14
Understanding connections and roles of gut microbiome in cardiovascular diseases	14
Microorganisms that participate in biochemical cycles in wetlands	14
Evaluating the risks associated with Shiga-toxin-producing Escherichia coli (STEC) in private well waters in Canada	13
Fungal endophyte diversity in table grapes	13
Rates of fluoroquinolone resistance in domestically acquiredCampylobacter jejuniare increasing in people living within a model study location in Canada	13
A short overview of the CRISPR-Cas adaptation stage	12
Isolation of lipopeptide antibiotics from Bacillus siamensis: a potential biocontrol agent for Fusarium graminearum	11
Characterization of a plant-growth-promoting non-nodulating endophytic bacterium (Stenotrophomonas maltophilia) from the root nodules of Mucuna utilis var. capitata L. (Safed Kaun	11
Volatile organic compounds kill the white-nose syndrome fungus, Pseudogymnoascus destructans, in hibernaculum sediment	11
Frontrunners in the race to develop a SARS-CoV-2 vaccine	11

Old problems and new solutions: antibiotic alternatives in food animal production	11
Bioprospection of native psychrotolerant plant-growth-promoting rhizobacteria from Peruvian Andean Plateau soils associated with Chenopodium quinoa	10
Community structure and diversity of the microbiomes of two microhabitats at the root–soil interface: implications of meta-analysis of the root-zone soil and root endosphere microbial communities in X	10
Isolation of Bacillus subtilis strain SEM-2 from silkworm excrement and characterisation of its antagonistic effect against Fusarium spp.	10
Evaluation of biochars as carriers for Rhizobium leguminosarum	10
Evolving the core microbial community in pit mud based on bioturbation of fortified Daqu	10
Administration of Enterococcus faecium HS-08 increases intestinal acetate and induces immunoglobulin A secretion in mice	9
Effects of Funneliformis mosseae on the utilization of organic phosphorus in Camellia oleifera Abel	9
Co-occurrence patterns among prokaryotes across an age gradient in pit mud of Chinese strong-flavor liquor	9
Variety features differentiate microbiota in the grape leaves	9
mfsQ encoding an MFS efflux pump mediates adaptive protection of Stenotrophomonas maltophilia against benzalkonium chloride	8
In situ biochemical characterization of Venus cloud particles using a life-signature detection microscope	8
Development of droplet digital PCR assays to quantify genes involved in nitrification and denitrification, comparison with quantitative real-time PCR and validation of assays in vineyard soil	8
Delineating the key virulence factors and intraspecies divergence of Vibrio harveyi via whole-genome sequencing	8
Biological characteristics and whole-genome analysis of the Enterococcus faecalis phage PEf771	8
Insights into irr and rirA gene regulation on the virulence of Brucella melitensis M5-90	8
Strain improvement of Trichoderma spp. through two-step protoplast fusion for cellulase production enhancement	7
Diversity and community structure of ammonia-oxidizing archaea in rhizosphere soil of four plant groups in Ebinur Lake wetland	7
Occurrence of Aspergillus niger strains on a polychrome cotton painting and their elimination by anoxic treatment	7
Close-up on a bacterial informational war in the geocaulosphere	7
Biofilm-forming ability of poultry Campylobacter jejuni strains in the presence and absence of Pseudomonas aeruginosa	7
Quantitative proteomic profiling of shake flask versus bioreactor growth reveals distinct responses of Agrobacterium tumefaciens for preparation in molecular pharming	7
Repurposing of escitalopram oxalate and clonazepam in combination with ciprofloxacin and sulfamethoxazole–trimethoprim for treatment of multidrug-resistant microorganisms and evaluation of the cleavag	7
Staphylococcus aureus grown in anaerobic conditions exhibits elevated glutamine biosynthesis and biofilm units	7
Advancing undergraduate synthetic biology education: insights from a Canadian iGEM student perspective	7
Rhizospheric soil fungal community patterns of Duchesnea indica in response to altitude gradient in Yunnan, southwest China	7
Interplay between stress and immunity triggers herpes zoster infection in COVID-19 patients: a review	6
Risk assessment of secondary metabolites produced by fungi in the genus Stemphylium	6
Exposure of Agrobacterium tumefaciens to agroinfiltration medium demonstrates cellular remodelling and may promote enhanced adaptability for molecular pharming	6
Finding the silver lining during a global pandemic: opportunities for curriculum innovation in microbiology education	6
Clinical evaluation of the GeneXpert^® Xpert^® Xpress SARS-CoV-2/Flu/RSV PLUS combination test	6
Effects of bioporous carriers on the performance and microbial community structure in side-stream anaerobic membrane bioreactors	6
Evaluation of the lignite biotransformation capacity of Fusarium sp. NF01 cultured on different growth substrates	6
Long-term nitrogen fertilization shaped the nifH, nirK, and nosZ gene community patterns in red paddy soil in south China	6
Aluminum induces oxidative damage in Saccharomyces cerevisiae	6
Diet and ontogeny drastically alter the larval microbiome of the invertebrate modelGalleria mellonella	6
Diversity of soil fungi in the vineyards of Changli region in China	6
Bacillus subtilis and Bacillus velezensis population dynamics and quantification of spores after inoculation on ornamental plants	6
Corn microbial diversity and its relationship to yield	5
Functional analysis of the ocnE gene involved in nicotine-degradation pathways in Ochrobactrum intermedium SCUEC4 and its enzymatic properties	5
Analysis of bacterial communities associated with Mountain Chickadees (Poecile gambeli) across urban and rural habitats	5
Contamination of hay and haylage with enteric bacteria and selected antibiotic resistance genes following fertilization with dairy manure or biosolids	5
Disinfection mechanism of the photocatalytic activity of SnO₂ thin films against Candida albicans, proposed from experimental and simulated perspectives	5
Soil microbial community composition in a paddy field with different fertilization managements	5
The mitochondrial genome of Ophiostoma himal-ulmi and comparison with other fungi causing Dutch elm disease	5
Lactobacillus rhamnosus cell-free extract targets virulence and antifungal drug resistance in Candida albicans	5
Analysis of microbial community diversity and physicochemical factors in pit mud of different ages based on high-throughput sequencing	5
Sequential markerless genetic manipulations of species from the Neisseria genus	5