Computers in Biology and Medicine

Article	Citations
Editorial Board	417
Editorial Board	368
Automatic segmentation of intraluminal thrombosis of abdominal aortic aneurysms from CT angiography using a mixed-scale-driven multiview perception network (M2Net) model	331
Diffuse tumors: Molecular determinants shared by different cancer types	282
Functional identification and prediction of lncRNAs in esophageal cancer	281
Artificial intelligence for identification of candidates for device-aided therapy in Parkinson's disease: DELIST-PD study	272
Counting on AR: EEG responses to incongruent information with real-world context	256
Assessing clinical utility of machine learning and artificial intelligence approaches to analyze speech recordings in multiple sclerosis: A pilot study	247
Identifying indications for novel drugs using electronic health records	232
Molecular modelling and experimental validation identified a new therapeutic inhibitor of toxoplasmosis	225
Hybrid offline and self-knowledge distillation for acute ischemic stroke lesion segmentation from non-contrast CT scans	220
Carotid single- and dual-layer stents reduce the wall adhesion of platelets by influencing flow and cellular transport	216
Identification of JUN as determinant of osteoarthritis and its inhibition by the Chinese herbal formulae Zhuanggu Huoxue Tang	206
Pathogenicity classification of missense mutations based on deep generative model	204
Pedicle drilling force control of a robotic surgical system via spine-soft tissue coupling model and parameters optimization	199
A partially shared joint clustering framework for detecting protein complexes from multiple state-specific signed interaction networks	198
S2FLNet: Hepatic steatosis detection network with body shape	195
Automated identification of patient subgroups: A case-study on mortality of COVID-19 patients admitted to the ICU	193
Contrastive learning based method for X-ray and CT registration under surgical equipment occlusion	189
Enhancing targeted tumor treatment: A novel fuzzy logic framework for precision drug delivery strategy selection	186
A computational model of the effects of macronutrients absorption and physical exercise on hormonal regulation and metabolic homeostasis	180
Analysis of COVID-19 pandemic in USA, using Topological Weighted Centroid	173
A self-supervised COVID-19 CT recognition system with multiple regularizations	173
Red blood cell passage through deformable interendothelial slits in the spleen: Insights into splenic filtration and hemodynamics	173
Adaptive nonlinear filtering algorithms for removal of non-stationary noise in electronystagmographic signals	169

Graph neural network-based subgraph analysis for predicting adverse drug events	167
Multiscale differential geometry learning of networks with applications to single-cell RNA sequencing data	166
Unraveling the complexities of pathological voice through saliency analysis	160
Non-same-scale feature attention network based on BPD for medical image segmentation	156
Class-Specific Distribution Alignment for semi-supervised medical image classification	150
Reversing skin cancer adversarial examples by multiscale diffusive and denoising aggregation mechanism	142
Discrete element method-based simulation system for predicting natural stone evacuation pathways in patients with urolithiasis	142
Evaluation of the mechanical behaviour of the expandable wedge locked nail fixation in retrograde use: A finite element study	138
A novel mobile phone and tablet application for automatized calculation of pain extent	138
An improved RIME optimization algorithm for lung cancer image segmentation	137
CauDR: A causality-inspired domain generalization framework for fundus-based diabetic retinopathy grading	136
Two-stage error detection to improve electron microscopy image mosaicking	135
Linear and nonlinear analysis of intrinsic mode function after facial stimuli presentation in children with autism spectrum disorder	134
A hybrid methodology for breast screening and cancer diagnosis using thermography	134
DrugormerDTI: Drug Graphormer for drug–target interaction prediction	133
IVD fibrosis and disc collapse comprehensively aggravate vertebral body disuse osteoporosis and zygapophyseal joint osteoarthritis by posteriorly shifting the load transmission pattern	133
Blood glucose detection based on Teager-Kaiser main energy of photoacoustic signal	133
Development and validation of a neutrophil extracellular traps-related gene signature for lower-grade gliomas	131
Hemodynamic alternations following stent deployment and post-dilation in a heavily calcified coronary artery: In silico and ex-vivo approaches	130
KNU-DTI: KNowledge United Drug-Target Interaction prediction	129
JoCoRank: Joint correlation learning with ranking similarity regularization for imbalanced fetal brain age regression	129
Disclosing neonatal pain in real-time: AI-derived pain sign from continuous assessment of facial expressions	128
Editorial Board	128
Corrigendum to “Unraveling the molecular landscape of non-small cell lung cancer: Integrating bioinformatics and statistical approaches to identify biomarkers and drug repurposing” [Comput. Biol. Med.	128
Deep learning and machine learning approaches to classify stomach distant metastatic tumors using DNA methylation profiles	127
Drug repositioning for rosacea disease: Biological TARGET identification, molecular docking, pharmacophore mapping, and molecular dynamics analysis	126
Predictive modeling for early detection of biliary atresia in infants with cholestasis: Insights from a machine learning study	126
Modelling of thrombus formation, growth and embolisation in the left atrial appendage under atrial fibrillation	126
Conditional GAN based augmentation for predictive modeling of respiratory signals	126
You get the best of both worlds? Integrating deep learning and traditional machine learning for breast cancer risk prediction	124
Mass diffusion in multi-layer systems: an electrical analogue modelling approach	124
Prediction of colorectal cancer based on taxonomic levels of microorganisms and discovery of taxonomic biomarkers using the Grouping-Scoring-Modeling (G-S-M) approach	124
Automated mitral inflow Doppler peak velocity measurement using deep learning	121
Prediction of lung cancer metastasis by gene expression	121
Deep-learning-based real-time individualization for reduce-order haemodynamic model	121
Analysis of domain shift in whole prostate gland, zonal and lesions segmentation and detection, using multicentric retrospective data	117
Automated tool detection with deep learning for monitoring kinematics and eye-hand coordination in microsurgery	115
Uniqueness of inspiratory airflow patterns in a realistic rat nasal cavity	114
Identification of potential agonist-like molecules for α2-adrenergic receptor by multi-layer virtual screening to combat sinusitis	113
Multi-constraint point set registration with redundant point removal for the registration of coronary arteries	112
Electroanatomical mapping of the stomach with simultaneous biomagnetic measurements	112
Integrating biocomputational techniques for Breast cancer drug discovery via the HER-2, BCRA, VEGF and ER protein targets	111
Identification of anti-cancer organometallic compounds by inhibition of BCL-2/Bax interactions	111
Vectorial-based analysis of dual-tracer PET imaging: A proof of concept	109
Context encoder transfer learning approaches for retinal image analysis	109
ILSHIP: An interpretable and predictive model for hypothyroidism	108
CARES: A Corpus for classification of Spanish Radiological reports	107
Personalized brachytherapy dose reconstruction using deep learning	105
A general sample-weighted framework for epileptic seizure prediction	104
Dynamic topography analysis of the cornea and its application to the diagnosis of keratoconus	104

Performance of multilabel machine learning models and risk stratification schemas for predicting stroke and bleeding risk in patients with non-valvular atrial fibrillation	104
Screening of potent phytochemical inhibitors against SARS-CoV-2 protease and its two Asian mutants	103
Development of closed-loop modelling framework for adaptive respiratory pacemakers	103
Dual-Stream Subspace Clustering Network for revealing gene targets in Alzheimer's disease	103
A Three-branch Jointed Feature and Topology Decoder guided by game-theoretic interactions for temporomandibular joint segmentation	102
Triage and monitoring of COVID-19 patients in intensive care using unsupervised machine learning	102
In silico evaluation of lattice designs for additively manufactured total hip implants	102
Insights from explainable AI in oesophageal cancer team decisions	101
FCSU-Net: A novel full-scale Cross-dimension Self-attention U-Net with collaborative fusion of multi-scale feature for medical image segmentation	101
Gene-related Parkinson's disease diagnosis via feature-based multi-branch octave convolution network	100
Enhancing cell instance segmentation in scanning electron microscopy images via a deep contour closing operator	100
Automatic eczema classification in clinical images based on hybrid deep neural network	100
Semi-empirical Anticoagulation Model (SAM): Dose prediction during warfarin therapy	99
LSDVvac: An immunoinformatics database for vaccine design against lumpy skin disease virus	99
Synergistic eigenanalysis of covariance and Hessian matrices for enhanced binary classification on health datasets	99
Identifying fetal status with fetal heart rate: Deep learning approach based on long convolution	98
Classical Simulations on Quantum Computers: Interface-Driven Peptide Folding on Simulated Membrane Surfaces	97
MulStack: An ensemble learning prediction model of multilabel mRNA subcellular localization	96
MCA-net: A multi-task channel attention network for Myocardial infarction detection and location using 12-lead ECGs	96
Insights into potential mechanisms of asthma patients with COVID-19: A study based on the gene expression profiling of bronchoalveolar lavage fluid	95
Enhanced depression detection from speech using Quantum Whale Optimization Algorithm for feature selection	94
Data-driven discovery of sparse dynamical model of cardiovascular system for model predictive control	94
Identification of lncRNA associated with the SERPINE1 gene in colorectal cancer through TGF-β pathway	94
An efficient model for extracting respiratory and blood oxygen saturation data from photoplethysmogram signals by removing motion artifacts using heuristic-aided ensemble learning model	94
DRBpred: A sequence-based machine learning method to effectively predict DNA- and RNA-binding residues	93
EpiTEAmDNA: Sequence feature representation via transfer learning and ensemble learning for identifying multiple DNA epigenetic modification types across species	92
AGNet: Automatic generation network for skin imaging reports	92
A mask R-CNN based automatic assessment system for nail psoriasis severity	92
Extinction and stationary distribution of a stochastic COVID-19 epidemic model with time-delay	92
COVID-19 diagnosis using state-of-the-art CNN architecture features and Bayesian Optimization	91
The role of mechano-electric feedbacks and hemodynamic coupling in scar-related ventricular tachycardia	91
Quantifying the influence of combined lung and kidney support using a cardiovascular model and sensitivity analysis-informed parameter identification	90
Multi-label classification of fundus images with graph convolutional network and LightGBM	90
DE-JANet: A unified network based on dual encoder and joint attention for Alzheimer’s disease classification using multi-modal data	90
Wearable-based human flow experience recognition enhanced by transfer learning methods using emotion data	90
AIScholar: An OpenFaaS-enhanced cloud platform for intelligent medical data analytics	89
Integrating CNN and Bi-LSTM for protein succinylation sites prediction based on Natural Language Processing technique	88
D-glucose-conjugated thioureas containing 2-aminopyrimidine as potential multitarget inhibitors for type 2 diabetes mellitus: Synthesis and biological activity study	88
Detecting IDH and TERTp mutations in diffuse gliomas using 1H-MRS with attention deep-shallow networks	88
Pharmacophore-guided computational modeling of quinolone-ATPase conjugate inhibitors targeting DNA GyrB subunit of Staphylococcus aureus	87
REDDA: Integrating multiple biological relations to heterogeneous graph neural network for drug-disease association prediction	87
Context-aggregator: An approach of loss- and class imbalance-aware aggregation in federated learning	87
Discrepancy-based diffusion models for lesion detection in brain MRI	86
Numerical analysis of coil designs to expedite fracture healing using dielectrophoresis with S method	86
Beyond accuracy: The need for explainable AI in biomedical voice technology	86
Predicting lung cancer survival based on clinical data using machine learning: A review	85
Artificial intelligence techniques for prediction of drug synergy in malignant diseases: Past, present, and future	85
A YOLO based software for automated detection and analysis of rodent behaviour in the open field arena	84
Potential inhibitors of the main protease of SARS-CoV-2 and modulators of arachidonic acid pathway: Non-steroidal anti-inflammatory drugs against COVID-19	84
A systematic review on the state-of-the-art strategies for protein representation	84
AELGNet: Attention-based Enhanced Local and Global Features Network for medicinal leaf and plant classification	84
Stack-AAgP: Computational prediction and interpretation of anti-angiogenic peptides using a meta-learning framework	84
The role of the extracellular matrix in the reduction of lateral force transmission in muscle bundles: A finite element analysis	83
Prostate158 - An expert-annotated 3T MRI dataset and algorithm for prostate cancer detection	83
Towards a better understanding of TF-DNA binding prediction from genomic features	83
A novel hybrid ViT-LSTM model with explainable AI for brain stroke detection and classification in CT images: A case study of Rajshahi region	83
Computational prediction of protein folding rate using structural parameters and network centrality measures	82
How CLSPN could demystify its prognostic value and potential molecular mechanism for hepatocellular carcinoma: A crosstalk study	82
A transformer-based deep neural network for arrhythmia detection using continuous ECG signals	81
An efficient image segmentation method for skin cancer imaging using improved golden jackal optimization algorithm	81
GasHisSDB: A new gastric histopathology image dataset for computer aided diagnosis of gastric cancer	81
HOTGpred: Enhancing human O-linked threonine glycosylation prediction using integrated pretrained protein language model-based features and multi-stage feature selection approach	80
The role and potential of computer-aided drug discovery strategies in the discovery of novel antimicrobials	80
Estimation of BMI from facial images using semantic segmentation based region-aware pooling	79
Single-channel EEG based insomnia detection with domain adaptation	79
Simulated annealing aided genetic algorithm for gene selection from microarray data	79
A unique view of SARS-CoV-2 through the lens of ORF8 protein	79
Eye movement analysis for real-world settings using segmented linear regression	79
Novel ensemble of optimized CNN and dynamic selection techniques for accurate Covid-19 screening using chest CT images	78
Temporal relative transformer encoding cooperating with channel attention for EEG emotion analysis	78
Causal relationship between slow waves of arterial, intracranial pressures and blood velocity in brain	78
A method for predicting linear and conformational B-cell epitopes in an antigen from its primary sequence	78
Longitudinal dementia trajectories for Alzheimer’s Disease characterization and prediction	77
Deriving a suitable schedule through robust H	77
Fine-grained food image classification and recipe extraction using a customized deep neural network and NLP	76
Visual prior-based cross-modal alignment network for radiology report generation	76
Prediction of protein N-terminal acetylation modification sites based on CNN-BiLSTM-attention model	76
A review of deep learning-based information fusion techniques for multimodal medical image classification	76
Drug repurposing of triazoles against mucormycosis using molecular docking: A short communication	76
A robust drug recall supply chain management system using hyperledger blockchain ecosystem	76

Dynamic Statistical Attention-based lightweight model for Retinal Vessel Segmentation: DyStA-RetNet	76
Improved predictive diagnosis of diabetic macular edema based on hybrid models: An observational study	75
Effect of tumor heterogeneity on enhancing drug delivery to vascularized tumors using thermo-sensitive liposomes triggered by hyperthermia: A multi-scale and multi-physics computational model	74
Structure-based design of promising natural products to inhibit thymidylate kinase from Monkeypox virus and validation using free energy calculations	74
Sparse Dynamic Volume TransUNet with multi-level edge fusion for brain tumor segmentation	74
SURVS: A Swin-Unet and game theory-based unsupervised segmentation method for retinal vessel	74
Hierarchical cumulative network for unsupervised medical image registration	74
A deep learning based model using RNN-LSTM for the Detection of Schizophrenia from EEG data	74
Artificial vascular image generation using blood vessel texture maps	74
Thyroid region prior guided attention for ultrasound segmentation of thyroid nodules	73
Emotion recognition in EEG signals using deep learning methods: A review	73
Computer models evaluating hand tremors in Parkinson's disease patients	72
A comprehensive analysis of single-cell RNA transcriptome reveals unique SPP1+ chondrocytes in human osteoarthritis	72
Performance optimization of differential evolution with slime mould algorithm for multilevel breast cancer image segmentation	72
Quantitative computed tomography imaging-based classification of cement dust-exposed subjects with an artificial neural network technique	71
Mapping synthetic binding proteins epitopes on diverse protein targets by protein structure prediction and protein-protein docking	71
Dynamic modeling of antibody repertoire reshaping in response to viral infections	71
Identification of molecular and cellular infection response biomarkers associated with anthrax infection through comparative analysis of gene expression data	71
Exploring molecular mechanisms of diazinon toxicity in HT22 hippocampal neurons through integrated miRNA and mRNA profiling	70
Molecular hybridization assisted multi-technique approach for designing USP21 inhibitors to halt catalytic triad-mediated nucleophilic attack and suppress pancreatic ductal adenocarcinoma progression:	70
Torque modulation mechanism of the knee joint during balance recovery	70
Transcriptome analysis displays new molecular insights into the mechanisms of action of Mebendazole in gastric cancer cells	70
A robust time delay estimation method for ultrasonic echo signals and elastography	69
PEA-Net: A progressive edge information aggregation network for vessel segmentation	69
A computational framework to simulate the thermochemical process during thermochemical ablation of biological tissues	69
Effective fall detection and post-fall breath rate tracking using a low-cost CW Doppler radar sensor	69
Validation of fluid-structure interaction simulations of the opening phase of phantom mitral heart valves under physiologically inspired conditions	68
Intelligent tuberculosis activity assessment system based on an ensemble of neural networks	68
Interplay of mutations, alternate mechanisms, and treatment breaks in leukaemia: Understanding and implications studied with stochastic models	68
Impact of physiological loads of arterial wall on nucleus deformation in endothelial cells: A computational study	68
Smoke veil prior regularized surgical field desmoking without paired in-vivo data	68
FIM: A fatigued-injured muscle model based on the sliding filament theory	67
SNN6mA: Improved DNA N6-methyladenine site prediction using Siamese network-based feature embedding	67
PNMC: Four-dimensional conebeam CT reconstruction combining prior network and motion compensation	67
Privacy preserving distributed learning classifiers – Sequential learning with small sets of data	67
Analysis and design of antithetic proportional-integral-derivative biocontrol-systems with species dilution	67
Characterizing patients at higher cardiovascular risk for prescribed stimulants: Learning from health records data with predictive analytics and data mining techniques	66
Identification of a novel gene signature for the prognosis of sepsis	66
Enhanced single-cell RNA-seq embedding through gene expression and data-driven gene-gene interaction integration	66
Automated engineered-stone silicosis screening and staging using Deep Learning with X-rays	65
Deep learning image registration for cardiac motion estimation in adult and fetal echocardiography via a focus on anatomic plausibility and texture quality of warped image	65
Repeated measures analysis for steady-state evoked potentials	65
Atten-Nonlocal Unet: Attention and Non-local Unet for medical image segmentation	65
Ce	65
QMaxViT-Unet+: A query-based MaxViT-Unet with edge enhancement for scribble-supervised segmentation of medical images	65
A computational optimization study of a self-expandable transcatheter aortic valve	64
A modified reptile search algorithm for global optimization and image segmentation: Case study brain MRI images	64
A novel compartmental model to capture the nonlinear trend of COVID-19	64
Cross attention guided multi-scale feature fusion for false-positive reduction in pulmonary nodule detection	64
PrimePatNet87: Prime pattern and tunable q-factor wavelet transform techniques for automated accurate EEG emotion recognition	64
The detection of mild traumatic brain injury in paediatrics using artificial neural networks	64
Biochemical reaction network topology defines dose-dependent Drug–Drug interactions	63
A simplified method for relapsing-remitting multiple sclerosis detection: Insights from resting EEG signals	63
Genomic instability-related twelve-microRNA signatures for predicting the prognosis of gastric cancer	63
A fully-convolutional residual encoder-decoder neural network to localize breast cancer on histopathology images	62
Lung nodule diagnosis and cancer histology classification from computed tomography data by convolutional neural networks: A survey	62
Genetic algorithm based image reconstruction applying the digital holography process with the Discrete Orthonormal Stockwell Transform technique for diagnosis of COVID-19	61
SWTRU: Star-shaped Window Transformer Reinforced U-Net for medical image segmentation	61
Estimation of potassium levels in hemodialysis patients by T wave nonlinear dynamics and morphology markers	61
Deep networks for behavioral variant frontotemporal dementia identification from multiple acquisition sources	61
Three-dimensional morphology scoring of hepatocellular carcinoma stratifies prognosis and immune infiltration	61
CFD simulations of inhalation through a subject-specific human larynx – Impact of the unilateral vocal fold immobility	61
A novel mTOR-associated gene signature for predicting prognosis and evaluating tumor immune microenvironment in lung adenocarcinoma	61
Wearable multisource quantitative gait analysis of Parkinson's diseases	60
Editorial Board	60
Prediction of drug-target interactions via neural tangent kernel extraction feature matrix factorization model	60
Cancer-inspired genomics mapper model for the generation of synthetic DNA sequences with desired genomics signatures	60
Role of [18F]-PSMA-1007 PET radiomics for seminal vesicle invasion prediction in primary prostate cancer	60
Bone marrow sparing oriented multi-model image registration in cervical cancer radiotherapy	60
SPMLD: A skin pathological image dataset for non-melanoma with detailed lesion area annotation	60
Computationally efficient model to predict the deformations of a cellular foot orthotic	60
Evaluation of Cellpose segmentation with sequential thresholding for instance segmentation of cytoplasms within autofluorescence images	59
Enclosing 95% confidence area and volume to center of pressure and center of mass in posturography using optimization algorithm and coordinate ascent methods	59
A novel virtual robotic platform for controlling six degrees of freedom assistive devices with body-machine interfaces	59
An automated parametric ear model to improve frugal 3D scanning methods for the advanced manufacturing of high-quality prosthetic ears	59
A wrapper method for finding optimal subset of multimodal Magnetic Resonance Imaging sequences for ischemic stroke lesion segmentation	59
Respiratory modulation of the heart rate: A potential biomarker of cardiorespiratory function in human	58
A mathematical model of tissue axial and radial diffusion in the microvasculature for intravascular microscopy and phosphorescence quenching data	58
Metagenome comparison (MC): A new framework for detecting unique/enriched OMUs (operational metagenomic units) derived from whole-genome sequencing reads	58
MG-Net: Multi-level global-aware network for thymoma segmentation	58
Characterization of cancer subtypes associated with clinical outcomes by multi-omics integrative clustering	58
MOSDNET: A multi-omics classification framework using simplified multi-view deep discriminant representation learning and dynamic edge GCN with multi-task learning	58
recruIT: A cloud-native clinical trial recruitment support system based on Health Level 7 Fast Healthcare Interoperability Resources (HL7 FHIR) and the Observational Medical Outcomes Partnership Commo	57
DNA protein binding recognition based on lifelong learning	57
A bidirectional registration neural network for cardiac motion tracking using cine MRI images	56
Two-stage data augmentation for improved ASR performance for dysarthric speech	56
An unsupervised image registration method employing chest computed tomography images and deep neural networks	56
Hemodynamics indicates differences between patients with and without a stroke outcome after left ventricular assist device implantation	56
Attention2Minority: A salient instance inference-based multiple instance learning for classifying small lesions in whole slide images	56
Breast cancer detection and classification: A study on the specification and implementation of multilayer perceptron analog artificial neural networks	55
Integrating local and global attention mechanisms for enhanced oral cancer detection and explainability	55
PIPE-Net: A pyramidal-input-parallel-encoding network for the segmentation of corneal layer interfaces in OCT images	55
An adaptive language model-based intelligent medication assistant for the decision support of antidepressant prescriptions	55
Automatic segmentation and classification of Papanicolaou-stained cells and dataset for oral cancer detection	55
Energy consumption during insect flight and bioinspiration for MAV design: A review	54