OOIR: Observatory of International Research

Papers

(The TQCC of Folia Microbiologica is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-07-01 to 2025-07-01.)

Article	Citations
Fine-scale mapping of the microbiome on phylloplane and spermoplane of aromatic and non-aromatic rice genotypes	62
First isolation of Arcanobacterium pinnipediorum from a grey seal pup (Halichoerus grypus) in the UK	48
Correction to: Molecular chaperone Hsp90 protects KCBP from degradation by proteasome in Dunaliella salina cells	30
Re-discovery of Trichophyton bullosum in North Africa as a cause of severe dermatophytosis in donkeys	30
Gut microbiota composition in recurrent acute otitis media: a cross-sectional observational study	30
Transcriptional modulation of Porphyromonas gingivalis biofilms on titanium-copper implant surfaces	29
Macronutrients-availing microbiomes: biodiversity, mechanisms, and biotechnological applications for agricultural sustainability	28
Rhizobacterial community and growth-promotion trait characteristics of Zea mays L. inoculated with Pseudomonas fluorescens UM270 in three different soils	27
Genome sequence and comparative analysis of fungal antagonistic strain Bacillus velezensis LJBV19	27
Expanding the functional landscape of microbial entomopathogens in agriculture beyond pest management	26
A rare case report of tissue infection caused by Pantoea piersonii (basionym Kalamiella piersonii)	25
Gut microbiota in relationship to diabetes mellitus and its late complications with a focus on diabetic foot syndrome: A review	25
Use of pus metagenomic next-generation sequencing for efficient identification of pathogens in patients with sepsis	24
Decolorization and degradation of reactive orange 16 by Bacillus stratosphericus SCA1007	24
Actinobacillus seminis DnaK interacts with bovine transferrin, lactoferrin, and hemoglobin as a putative iron acquisition mechanism	23
Deletion of the cheZ gene results in the loss of swimming ability and the decrease of adhesion ability to Caco-2 cells in Escherichia coli Nissle 1917	23
Phosphonium chloride–based deep eutectic solvents inhibit pathogenic Acanthamoeba castellanii belonging to the T4 genotype	22
Alteration of the intestinal microbiota associated with the development of nonalcoholic steatohepatitis and sarcopenia in SHRSP5/Dmcr	22
Phenotypic variability, race profiling and molecular diversity analysis of Indian populations of Fusarium oxysporum f. sp. lentis causing lentil wilt	21
Mining the diversity and functional profile of bacterial symbionts from the larvae of Chironomus circumdatus (bloodworms)	21
Early and on-site detection of Ganoderma-induced basal stem rot in oil palm: using recombinase polymerase amplification–lateral flow assay	20
A finding of potential coexisting bacteria and characterization of the bacterial communities in the fruiting body of Sarcodon aspratus	20
Disease-associated dysbiosis and potential therapeutic role of Akkermansia muciniphila, a mucus degrading bacteria of gut microbiome	19
Anti-inflammatory effects of extracellular vesicles and cell-free supernatant derived from Lactobacillus crispatus strain RIGLD-1 on Helicobacter pylori-induced inflammatory response in gastric epithe	18
The secrets of environmental Pseudomonas aeruginosa in slaughterhouses: Antibiogram profile, virulence, and antibiotic resistance genes	17

Current research on simultaneous oxidation of aliphatic and aromatic hydrocarbons by bacteria of genus Pseudomonas	16
Effects of Bacillus in Pectobacterium quorum quenching: A survey of two different acyl-homoserine lactonases	15
The soil-borne fungal pathogen Athelia rolfsii: past, present, and future concern in legumes	15
The UPC2 gene in Kluyveromyces lactis stress adaptation	15
Bacterial diversity, community structure and function in association of potato scabby tubers during storage in northern Thailand	14
The two sRNAs OmrA and OmrB indirectly repress transcription from the LEE1 promoter of enteropathogenic Escherichia coli	14
Influence of codon optimization, promoter, and strain selection on the heterologous production of a β-fructofuranosidase from Aspergillus fijiensis ATCC 20611 in Pichia pastoris	14
Biological activity of volatiles produced by the strains of two Pseudomonas and two Serratia species	14
A comparative assessment of microbial biodiesel and its life cycle analysis	13
Biopriming with multifarious sulphur-oxidizing bacteria improve in vitro Vigna radiata L. (mung bean) and Brassica juncea L. (mustard) seed germination	13
Investigation of potential ascorbate peroxidase inhibitors for anti-leishmaniasis therapy	13
Industrial biotransformations catalyzed by microbial lipases: screening platform and commercial aspects	12
Functional validation of OsRPM1 as a positive regulator of bacterial blight resistance in rice via virus-induced gene silencing	12
Influence of a nanoscale coating on plucking fingers and stainless steel on attachment and detachment of Salmonella Enteritidis, Escherichia coli and Campylobacter jejuni	12
Construction of Pseudomonas aeruginosa SDK-6 with synthetic lipase gene cassette and optimization of different parameters using response surface methodology for over-expression of recombinant lipase	12
Composition of the colon microbiota in the individuals with inflammatory bowel disease and colon cancer	12
Correction to: Anti-inflammatory and wound healing properties of lactic acid bacteria and its peptides	12
Biotechnological production of ectoine: current status and prospects	12
Biocontrol potential of Botrytis fabiopsis against the weeds of agricultural fields in the Qing-Tibetan Plateau	12
Microbial consortium with multifunctional attributes for the plant growth of eggplant (Solanum melongena L.)	12
In vitro activity of carvacrol in combination with meropenem against carbapenem-resistant Klebsiella pneumoniae	12
Characterization of plant growth-promoting endophytic fungi from Aegle marmelos Corr. and their role in growth enhancement and yield in rice	12
Screening of endophytic fungi from Cremastra appendiculata and their potential for plant growth promotion and biological control	12
Isolation and genetic characterization of Staphylococcus aureus from wild animal feces and game meats	11
Construction of single, double, or triple mutants within kojic acid synthesis genes kojA, kojR, and kojT by the CRISPR/Cas9 tool in Aspergillus oryzae	11
Phylogenic diversity of bacteria associated with potentially toxic cyanobacteria Microcystis aeruginosa: a synthesis on its bloom dynamics	11
Activated mesenchymal stem cells increase drug susceptibility of methicillin-resistant Staphylococcus aureus and Pseudomonas aeruginosa	11
Harnessing nature’s defenders: unveiling the potential of microbial consortia for plant defense induction against Alternaria blight in cumin	11
Antimicrobial peptide in polymethylmethacrylate bone cement as a prophylaxis of infectious complications in orthopedics–an experiment in a murine model	11
The broad antibacterial activity of a small synthetic receptor for cellular phosphatidylglycerol lipids	11
Correction to: Traditional to technological advancements in Ganoderma detection methods in oil palm	11
Occurrence of biogenic amines and their correlation with bacterial communities in the Ivorian traditional fermented fish adjuevan during the storage	11
Microbial nanotechnology for agriculture, food, and environmental sustainability: Current status and future perspective	10
COVID-19-associated pulmonary aspergillosis (CAPA): identification of Aspergillus species and determination of antifungal susceptibility profiles	10
Anti-Candida activity and biocompatibility of silver nanoparticles associated with denture glaze: a new approach to the management of denture stomatitis	10
Comparative analyses of gut microbiota reveal ammonia detoxification and nitrogen assimilation in Cyprinus carpio var. specularis	10
Purification and characterization of catechol 1,2-dioxygenase (EC 1.13.11.1; catechol-oxygen 1,2-oxidoreductase; C12O) using the local isolate of phenol-degrading Pseudomonas putida	10
Medicines as an emergent contaminant: the review of microbial biodegration potential	10
New insights and perspectives on the virulence of hypervirulent Klebsiella pneumoniae	10
Antimicrobial resistance mechanisms in non-tuberculous mycobacteria	10
CRISPR-Cas systems: role in cellular processes beyond adaptive immunity	10
Upgrading the accumulation of ginsenoside Rd in Panax notoginseng by a novel glycosidase-producing endophytic fungus G11-7	10
Characterization of alkaline protease enzyme produced from marine yeast Candida orthopsilosis AKB-1 and its applications	9
Purification and activity enhancement of extracellular tyrosinase from a protease-silenced zygomycete Amylomyces rouxii strain	9
Effect of LuxS/AI-2-mediated quorum sensing system on bacteriocin production of Lactobacillus plantarum NMD-17	9
Characterization of heavy metal-associated bacteria from petroleum-contaminated soil and their resistogram and antibiogram analysis	9
Synergistic interaction of cuminaldehyde and tobramycin: a potential strategy for the efficient management of biofilm caused by Pseudomonas aeruginosa	9
Unveiling the microbial diversity of biofilms on titanium surfaces in full-scale water-cooling plants using metagenomics approach	9
The phosphate-solubilising fungi in sustainable agriculture: unleashing the potential of fungal biofertilisers for plant growth	9
Protein engineering of invertase for enhancing yeast dough fermentation under high-sucrose conditions	9

Genetic diversity of oral streptococci in the guinea pig as assessed by sequence analysis of the 16S rRNA and groEL genes	9
Evaluation of inhibitory and probiotic properties of lactic acid bacteria isolated from vaginal microflora	9
Targeting virulence of resistant Escherichia coli by the FDA-approved drugs sitagliptin and nitazoxanide as an alternative antimicrobial approach	8
A pilot study on oral microbiome in electronic cigarettes consumers versus traditional cigarettes smokers	8
Anaerobic conditions are a major influence on Candida albicans chlamydospore formation	8
Characterization of Archaea membrane lipids in radioactive springs using shotgun lipidomics	8
Flagellimonas algarum sp. nov., isolated from dense mats of filamentous algae	8
Screening and identification of Paenibacillus polymyxa GRY-11 and its biological control potential against apple replant disease	8
The tellurite resistance gene cluster of pathogenic bacteria and its effect on oxidative stress response	8
Pichia Toolkit: Use of the combinatorial library screening system for expression of a marine laccase	8
Diversity and bioactive potential of Actinomycetia from the rhizosphere soil of Juniperus excelsa	8
Optimization of production conditions, isolation, purification, and characterization of tannase from filamentous fungi	7
Multifarious characteristics of sulfur-oxidizing bacteria residing in rice rhizosphere	7
Exploring the complex role of gut microbiome in the development of precision medicine strategies for targeting microbial imbalance-induced colon cancer	7
Astragalicola ephedrae sp. nov., isolated from the stem of Ephedra gerardiana in Ladakh, India	7
Correction to: The first case of Planococcus glaciei found in blood, a report from the Czech Republic	7
Evaluation of probiotic bifidobacteria strains from Iranian traditional dairy products for their anti-hyperlipidemic potential	7
Immobilization of microbial multienzyme preparation on calcium alginate beads as well as lyophilization with mosambi peel matrix improved its shelf-life and stability	7
Halophilic lactic acid bacteria — Play a vital role in the fermented food industry	7
Biodegradation of phthalic acid and terephthalic acid by Comamonas testosteroni strains	7
The CssRS two-component system of Bacillus subtilis contributes to teicoplanin and polymyxin B response	7
Virus removal by high-efficiency air (HEPA) filters and filtration capacity enhancement by nanotextiles: a pilot study	7
Positive effect of inoculation with an Aspergillus strain on phosphorus and iron nutrition plus volatile organic compounds in rice	7
Does ibuprofen affect the expression of alginate genes in pathogenic Pseudomonas aeruginosa strains?	6
Evaluation of the antifungal activity of α, β, and δ-damascone and inclusion complexes in β-cyclodextrin against Candida spp	6
Characterization and technological functions of different lactic acid bacteria from traditionally produced Kırklareli white brined cheese during the ripening period	6
Mini review: antimicrobial compounds produced by bacteria associated with marine invertebrates	6
Phyllobacteriaceae: a family of ecologically and metabolically diverse bacteria with the potential for different applications	6
Role of gut microbiome in developing necrotizing enterocolitis	6
Role of oral and gut microbiota in childhood obesity	6
Production of laccase enzyme from Curvularia lunata MY3: purification and characterization	6
Inability of Ogataea parapolymorpha pho91-Δ mutant to produce active methanol oxidase can be compensated by inactivation of the PHO87 gene	6
Inhibitory effects of Lactobacillus reuteri strain I300 against Helicobacter pylori adhesion, invasion, and inflammatory response in gastric epithelial cells in vitro	6
Catechin potentiates the antifungal effect of miconazole in Candida glabrata	6