OOIR: Observatory of International Research

Papers

(The TQCC of Journal of Heredity is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-05-01 to 2024-05-01.)

Article	Citations
A Fast and Efficient Single-stranded Genomic Library Preparation Method Optimized for Ancient DNA	72
Genomic Features of Parthenogenetic Animals	59
Landscape Genomics to Enable Conservation Actions: The California Conservation Genomics Project	54
What IsNe, Anyway?	43
Avian Coloration Genetics: Recent Advances and Emerging Questions	39
Consequences of Single-Locus and Tightly Linked Genomic Architectures for Evolutionary Responses to Environmental Change	35
Selective Interference and the Evolution of Sex	35
Sex Ratios in a Warming World: Thermal Effects on Sex-Biased Survival, Sex Determination, and Sex Reversal	30
Ultracontinuous Single Haplotype Genome Assemblies for the Domestic Cat (Felis catus) and Asian Leopard Cat (Prionailurus bengalensis)	30
Nile Tilapia: A Model for Studying Teleost Color Patterns	29
Implications of Large-Effect Loci for Conservation: A Review and Case Study with Pacific Salmon	28
A Reference Genome Assembly of Simmental Cattle, Bos taurus taurus	26
Extensive Linkage and Genetic Coupling of Song and Preference Loci Underlying Rapid Speciation inLaupalaCrickets	19
Extremely Widespread Parthenogenesis and a Trade-Off Between Alternative Forms of Reproduction in Mayflies (Ephemeroptera)	18
A Reference Genome Assembly of American Bison,Bison bison bison	17
Chromosome-Level Genome Assembly Reveals Dynamic Sex Chromosomes in Neotropical Leaf-Litter Geckos (Sphaerodactylidae:Sphaerodactylus)	17
CRISPR Knockouts of pmela and pmelb Engineered a Golden Tilapia by Regulating Relative Pigment Cell Abundance	16
Genome Assembly of SalicaceaePopulus deltoides(Eastern Cottonwood)I-69Based on Nanopore Sequencing and Hi-C Technologies	15
Genetic Diversity and Population Structure of Dromedary Camel-Types	14
Feather Gene Expression Elucidates the Developmental Basis of Plumage Iridescence in African Starlings	14
Low Persistence of Genetic Rescue Across Generations in the Arctic Fox (Vulpes lagopus)	13
Limited Evidence for Parallel Evolution Among Desert-AdaptedPeromyscusDeer Mice	13
The Combined Effect of Haplodiplonty and Partial Clonality on Genotypic and Genetic Diversity in a Finite Mutating Population	13
Powerful Identification of Large Quantitative Trait Loci Using Genome-Wide R/glmnet-Based Regression	13
Indirect Genetic Effects: A Cross-disciplinary Perspective on Empirical Studies	12

Genetic rescue remains underused for aiding recovery of federally listed vertebrates in the United States	12
Disentangling Complex Inheritance Patterns of Plant Organellar Genomes: An Example From Carrot	12
New Genetic Insights About Hybridization and Population Structure of Hawksbill and Loggerhead Turtles From Brazil	12
Seizing the moment: The opportunity and relevance of the California Conservation Genomics Project to state and federal conservation policy	12
Sequence Analysis and Ontogenetic Expression Patterns of Cone Opsin Genes in the Bluefin Killifish (Lucania goodei)	12
Chromosome-Level Reference Genome Assembly for the American Pika (Ochotona princeps)	11
Sex and Asex: A Clonal Lexicon	11
A Genome forBidens hawaiensis: A Member of a Hexaploid Hawaiian Plant Adaptive Radiation	10
A Chromosome-Level Genome Assembly of the Parasitoid Wasp,Cotesia glomerata(Hymenoptera: Braconidae)	10
Two Variants of KIT Causing White Patterning in Stock-Type Horses	10
Facultative Parthenogenesis in California Condors	10
Host, Microbiome, and Complex Space: Applying Population and Landscape Genetic Approaches to Gut Microbiome Research in Wild Populations	10
Mitochondria as environments for the nuclear genome in Drosophila: mitonuclear G×G×E	10
Genomic Assessment of Global Population Structure in a Highly Migratory and Habitat Versatile Apex Predator, the Tiger Shark (Galeocerdo cuvier)	10
Big Data in Conservation Genomics: Boosting Skills, Hedging Bets, and Staying Current in the Field	9
The phylogeny of California, and how it informs setting multispecies conservation priorities	9
Are Genomic Updates of Well-Studied Species Worth the Investment for Conservation? A Case Study of the Critically Endangered Magdalena River Turtle	9
The Influence of Environmental Variation on the Genetic Structure of a Poison Frog Distributed Across Continuous Amazonian Rainforest	9
Exploring the Genetic Consequences of Clonality in Haplodiplontic Taxa	9
Polygenic Basis and the Role of Genome Duplication in Adaptation to Similar Selective Environments	9
Relative Precision of the Sibship and LD Methods for Estimating Effective Population Size With Genomics-Scale Datasets	9
Where to draw the line? Expanding the delineation of conservation units to highly mobile taxa	9
Male Linked Genomic Region Determines Sex in DioeciousAmaranthus palmeri	8
The revised reference genome of the leopard gecko (Eublepharis macularius) provides insight into the considerations of genome phasing and assembly	8
Pervasive Genomic Signatures of Local Adaptation to Altitude Across Highland Specialist Andean Hummingbird Populations	8
Mitogenomes Reveal Multiple Colonization of Mountains by Rattus in Sundaland	8
Multi-Copy Gene Family Evolution on the Avian W Chromosome	8
Allele-Specific Expression and Evolution of Gene Regulation Underlying Acute Heat Stress Response and Local Adaptation in the Copepod Tigriopus californicus	8
Macroevolutionary Patterns of Sexual Size Dimorphism Among African Tree Frogs (Family: Hyperoliidae)	8
Avian Introgression Patterns are Consistent With Haldane’s Rule	8
Rapid Evolution of Seed Dormancy During Sunflower De-Domestication	7
Reference Genome Assembly of the Big Berry Manzanita (Arctostaphylos glauca)	7
On the Form and Origins of the Bizarre Sex Chromosomal System of the Mandarin Vole	7
A Unique Mitochondrial Gene Block Inversion in Antarctic Trematomin Fishes: A Cautionary Tale	7
On the Ecology and Distribution of Steelhead (Oncorhynchus mykiss) in California’s Eel River	7
Phylogeography of Cedros and Tiburón Island Mule Deer in North America’s Desert Southwest	7
Pleistocene Ice Ages Created New Evolutionary Lineages, but Limited Speciation in Northeast Pacific Winged Kelp	7
The Genetic Architecture of Plant Defense Trade-offs in a Common Monkeyflower	7
Prion Protein Gene (PRNP) Sequences Suggest Differing Vulnerability to Chronic Wasting Disease for Florida Key Deer (Odocoileus virginianus clavium) and Columbian White-Tailed Deer (O	7
Conservation Genomics of the Threatened Western Spadefoot,Spea hammondii, in Urbanized Southern California	7
Frequent Paternal Mitochondrial Inheritance and Rapid Haplotype Frequency Shifts in Copepod Hybrids	7
Opinion: Genetic Conflict With Mobile Elements Drives Eukaryotic Genome Evolution, and Perhaps Also Eukaryogenesis	7
Analysis of Genetic Diversity in the American Standardbred Horse Utilizing Short Tandem Repeats and Single Nucleotide Polymorphisms	6
Range-Wide Population Structure of 3 Deepwater Eteline Snappers Across the Indo-Pacific Basin	6
An Annotated Draft Genome for the Andean Bear,Tremarctos ornatus	6
Introgression ofASIPandTYRP1Alleles Explains Coat Color Variation in Valais Goats	6
High-Quality SNP Linkage Maps Improved QTL Mapping and Genome Assembly inPopulus	6
The Indirect Genetic Effect Interaction Coefficientψ: Theoretically Essential and Empirically Neglected	6
Population Genomics of New Zealand Pouched Lamprey (kanakana; piharau;Geotria australis)	6
Heritability Estimates of Antler and Body Traits in White-Tailed Deer (Odocoileus virginianus) From Genomic-Relatedness Matrices	6

Reference Genome of the Northwestern Pond Turtle,Actinemys marmorata	6
Social Selection and the Evolution of Maladaptation	6
Extremely Low mtDNA Diversity and High Genetic Differentiation Reveal the Precarious Genetic Status of Dugongs in New Caledonia, South Pacific	6