Journal of Medical Microbiology

Papers
(The TQCC of Journal of Medical Microbiology is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-06-01 to 2025-06-01.)
ArticleCitations
An end-point multiplex RT-PCR for SARS-CoV-2, Influenza A and B detection, including simultaneous RNAse P amplification: a timely tool for more accessible differential diagnosis100
Clinical efficacy and safety of antifungal drugs for the treatment of Candida parapsilosis infections: a systematic review and network meta-analysis67
Identification of consensus head and neck cancer-associated microbiota signatures: a systematic review and meta-analysis of 16S rRNA and The Cancer Microbiome Atlas datasets34
Evaluation of anti-biofilm effect of antimicrobial sonodynamic therapy-based periodontal ligament stem cell-derived exosome-loaded kojic acid on Enterococcus faecalis biofilm34
Adaptation of gltA and ssrA assays for diversity profiling by Illumina sequencing to identify Bartonella henselae, B. clarridgeiae and B. koehlerae32
In vitro activity of bedaquiline against Mycobacterium avium complex27
Hospital transmission of borderline oxacillin-resistant Staphylococcus aureus evaluated by whole-genome sequencing24
Evaluation of the World Health Organization Global Invasive Bacterial Vaccine-Preventable Disease (IB-VPD) Surveillance Network’s Laboratory External Quality Assessment Programme, 2014–201923
Changes in the expression of miR-103a and miR-21: a functional diagnosis of toxocariasis in rats23
Class 1 integrons in clinical and swine industry isolates of Salmonella Typhimurium from Colombia, dating 1997 to 201721
Changes in serum amyloid A, plasma high-density lipoprotein cholesterol and apolipoprotein A-I as useful biomarkers for Mycobacterium tuberculosis infection21
In vitro and in silico assessment of anti-biofilm and anti-quorum sensing properties of 2,4-Di-tert butylphenol against Acinetobacter baumannii20
Serum biomarkers to differentiate Gram-negative, Gram-positive and fungal infection in febrile patients20
Erratum: Dysbiosis–epigenetics–immune system interaction and ageing health problems19
CXCR2 perturbation promotes Staphylococcus aureus implant-associated infection19
Effector genes of type III secretion system and biofilm formation in virulent Pseudomonas aeruginosa isolates carrying bla KPC-2 and bla PDC-5 genes in hospital environment19
Clinical and public health implications of increasing notifications of LEE-negative Shiga toxin-producing Escherichia coli in England, 2014–202219
Targeted ‘knock out’ therapy with a combination antimicrobial regimen restores treatment options in the management of extensively drug-resistant carbapenemase-producing organisms19
Novel automated antifungal susceptibility testing system for yeasts based on dual-detection algorithm of turbidimetry and colorimetry19
Localized outbreaks of Pseudomonas aeruginosa belonging to international high-risk clones in a south Indian hospital18
Sertraline has in vitro activity against both mature and forming biofilms of different Candida species18
The human bile salt sodium deoxycholate induces metabolic and cell envelope changes in Salmonella Typhi leading to bile resistance17
Gut microbiota associated with the mitigation effect of synbiotics on adverse events of neoadjuvant chemotherapy in patients with esophageal cancer: A retrospective exploratory study17
Complete genome sequence and probiotic properties of Lactococcus petauri LZys1 isolated from healthy human gut17
Technologies to decontaminate bacterial biofilm on hospital surfaces: a potential new role for cold plasma?16
Genetic association of gut microbiota with osteoarthritis: a multivariable Mendelian randomization study considering medication use15
Utility of in-house and commercial PCR assay in diagnosis of Covid-19 associated mucormycosis in an emergency setting in a tertiary care center15
Delays to treatment initiation and emergence of drug resistance among new adult tuberculosis patients in Tigray, Northern Ethiopia15
Antifungal activity and potential mechanism of action of Huangqin decoction against Trichophyton rubrum15
In vitro activity of imipenem/relebactam against piperacillin/tazobactam-resistant and meropenem-resistant non-Morganellaceae Enterobacterales and Pseudomonas aeruginosa collected from patients with b14
Genomic insights into extended-spectrum β-lactamase- and plasmid-borne AmpC-producing Escherichia coli transmission between humans and livestock in rural Cambodia14
Chronic Strongyloides stercoralis infection in Fijian migrants to the UK14
Launching the Clostridioides difficile collection14
Fluoroquinolone resistance in non-typhoidal Salmonella enterica isolated from slaughtered pigs in Thailand13
In vitro antifungal effect of a plant-based product, CIN-102, on antifungal resistant filamentous fungi and their biofilms13
Genetic characteristics of azithromycin-resistant Neisseria gonorrhoeae collected in Hyogo, Japan during 2015–201913
MARGINAL NOTES, June 2023 – running on empty13
The emerging threat of Japanese encephalitis in Australia: is it the time to worry?13
SARS-CoV-2 in outdoor air following the third wave lockdown release, Portugal, 202113
Development of multiplex real-time PCR for detection of clarithromycin resistance genes for the Mycobacterium abscessus group13
Multicenter evaluation of the FilmArray Meningitis/Encephalitis assay in a routine setting13
Identification & correlation of bacterial diversity in oral cancer and long-term tobacco chewers- A case-control pilot study13
Comparison of the bacterial microbiome in the pharynx and nasal cavity of persistent, intermittent carriers and non-carriers of Staphylococcus aureus12
Protein expression profiling, in silico classification and pathway analysis of cariogenic bacteria Streptococcus mutans under bacitracin stress conditions12
Evaluation of the combined use of the Sepsityper Kit with the Clearview PBP2a assay for identification of staphylococci strains and detection of their methicillin resistance directly from positive blo12
Evaluation of in vitro activity of fosfomycin, and synergy in combination, in Gram-negative bloodstream infection isolates in a UK teaching hospital12
Lessons learned: drive-through COVID-19 clinic testing during an adaptive epidemic response and a point-of-care test assessment of a computer-read rapid lateral flow immunoassay with fluorescence-base12
Chitosan propolis nanocomposite alone or in combination with apramycin: an alternative therapy for multidrug-resistant Salmonella Typhimurium in rabbits: in vitro and in vivo study12
The Apoprotein E4 isotype does not affect the severity of COVID-19 infection and other flu-like syndromes12
Introducing biomarkers for invasive fungal disease in haemato-oncology patients: a single-centre experience12
The microbiome of the nasopharynx12
Mycoplasma genitalium molecular typing in men with non-gonococcal urethritis discriminates between phylogenetic clusters based on sexual preference and antibiotic resistance11
Quantifying patient- and hospital-level antimicrobial resistance dynamics in Staphylococcus aureus from routinely collected data11
Interpreting diagnosis outcomes for tuberculosis to timely and reliably predict non-tuberculosis mycobacteria isolation11
Towards an update on the antimicrobial use in Adult Care Units in Brazil: insights from multi-hospital prevalence study10
Whole-genome analysis of Haemophilus influenzae strains isolated from persons with cystic fibrosis10
A comparison of culture methods and polymerase chain reaction in detecting Clostridioides difficile from hospital surfaces10
MARGINAL NOTES, August, 2023. Something in the air10
Multi-drug-resistant tuberculosis and its associated factors among pulmonary tuberculosis patients linked to first-line anti-tuberculosis drugs in north-west Ethiopia10
Corynebacterium kroppenstedtii breast abscesses in context, a retrospective cohort study10
Expansion of hantavirus infection during the SARS-CoV-2 pandemic in Bosnia and Herzegovina, 202110
Mucormycosis-causing fungi in humans: a meta-analysis establishing the phylogenetic relationships using internal transcribed spacer (ITS) sequences10
Phenotypic diversity of type III secretion system activity in enteropathogenic Escherichia coli clinical isolates10
New generation fluoroquinolone sitafloxacin could potentially overcome the majority levofloxacin and moxifloxacin resistance in multidrug-resistant Mycobacterium tuberculosis10
Immunoassay-based evaluation of rOmp28 protein as a candidate for the identification of Brucella species10
JMM profile: Loop-mediated isothermal amplification (LAMP): for the rapid detection of nucleic acid targets in resource-limited settings9
Paecilomyces cicadae-fermented Radix astragali ameliorate diabetic nephropathy in mice by modulating the gut microbiota9
An isothermal amplification-coupled dipstick for the rapid detection of COVID-199
Deciphering the impact of Acinetobacter baumannii on human health, and exploration of natural compounds as efflux pump inhibitors to treat multidrug resistance9
Detection of IgM, IgG, IgA and neutralizing antibody responses to SARS-CoV-2 infection and mRNA vaccination9
Diagnostic yield of broad-range 16s rRNA gene PCR varies by sample type and is improved by the addition of qPCR panels targeting the most common causative organisms9
The changes of gut microbiota and metabolites in different drug-induced liver injuries9
Colistin utilization at a tertiary hospital in South Africa: an opportunity for antimicrobial stewardship practices9
Robust prediction of colorectal cancer via gut microbiome 16S rRNA sequencing data9
Clinical and microbiological investigation into mixed growth urine cultures9
Disinfection methods of dental unit waterlines contamination: a systematic review9
Long-term surveillance of group B Streptococcus strains isolated from infection and colonization in pregnant women and newborns9
Transient reemergence of Bordetella parapertussis in France in 20229
Group B streptococcal infections in infants in Iceland: clinical and microbiological factors9
Network-wide analysis of the Serosep EntericBio Gastro Panel 2 for the detection of enteric pathogens in Public Health Wales microbiology laboratories8
JMM Profile: Trichosporon yeasts: from superficial pathogen to threat for haematological-neutropenic patients8
Characterization of a Helicobacter pylori strain with high biofilm-forming ability8
Multiple mechanisms of linezolid resistance in Staphylococcus haemolyticus detected by whole-genome sequencing8
Evaluation of NG-Test CARBA 5 for the detection of carbapenemase-producing Gram-negative bacilli8
Exploring interspecies differences in ex vivo models of Pseudomonas aeruginosa keratitis: a comparative study of human, pig and sheep corneas8
Hidden bugs in a newly opened hospital: the distribution of skin microbiota among healthcare workers in a newly opened teaching hospital8
Emergence of carbapenem-resistant Pseudomonas alcaligenes and Pseudomonas paralcaligenes clinical isolates with plasmids harbouring bla IMP-1 in Japan8
Molecular tracking of carbapenem-resistant Acinetobacter baumannii clinical isolates: a multicentre study over a 4-year period across eastern China8
Increasingly limited options for the treatment of enteric fever in travellers returning to England, 2014–2019: a cross-sectional analytical study8
Dilemma and a way out for bacterial biofilm research8
The effect of daily usage of Listerine Cool Mint mouthwash on the oropharyngeal microbiome: a substudy of the PReGo trial8
Evaluation and validation of a commercial ELISA versus the in vitro toxin neutralization assay for determination of diphtheria anti-toxin in human serum7
Invasive Aggregatibacter infection: shedding light on a rare pathogen in a retrospective cohort analysis7
Repurposing the non-steroidal anti-inflammatory drug diflunisal as an adjunct therapy with amphotericin B against mucoralean fungi7
A systematic approach to microbial forensics7
In vitro activity of tubercidin against Mycobacterium tuberculosis and nontuberculosis Mycobacteria7
Genomic epidemiology of the opportunistic pathogen Staphylococcus coagulans from companion dogs7
Abf1 negatively regulates the expression of EPA1 and affects adhesion in Candida glabrata7
Clonal spread of ArmA- and OXA-23-coproducing Acinetobacter baumannii International Clone 2 in Brazil during the first wave of the COVID-19 pandemic7
Genomic characterization of colistin resistance in Klebsiella spp. under the pressure of colistin7
Establishing breakpoints for amoxicillin/clavulanate and ampicillin/sulbactam for rapid antimicrobial susceptibility testing directly from positive blood culture bottles7
In vitro efficacy of antibiotic loaded calcium sulfate beads (Stimulan Rapid Cure) against polymicrobial communities and individual bacterial strains derived from diabetic foot infections7
JMM Profiles for the Journal of Medical Microbiology: an update7
Latroeggtoxin-VI improves depression by regulating the composition and function of gut microbiota in a mouse model of depression7
Development of novel broad-range pan-genus PCR assays for the detection of Tropheryma species7
Massive sequencing of the V3–V4 hypervariable region of bronchoalveolar lavage from patients with COVID-19 and VAP reveals the collapse of the pulmonary microbiota6
Antifungal potential of silver nanoparticles stabilized with the flavonoid naringenin6
Inactivation of Candida albicans, Staphylococcus aureus and multidrug-resistant Escherichia coli with dielectric barrier discharged cold atmospheric plasma: a comparative study with antimicrobial drug6
Combined oropharyngeal/nares and nasopharyngeal swab sampling remain effective for molecular detection of SARS-CoV-2 Omicron variant6
Comparative analyses of clinical features reveal the severity of human adenovirus type 55 and type 7 in acute respiratory tract infections6
Impact of extreme weather events on the occurrence of infectious diseases in Belgium from 2011 to 20216
mgpB genotyping and genetic diversity for antimicrobial resistance of Mycoplasma genitalium6
Integrated analysis of intestinal microbiota and host gene expression in colorectal cancer patients6
Predominance of community-associated, methicillin-susceptible Staphylococcus aureus infections among hospitalized children and adolescents6
Characterization of invasive meningococcal disease case isolates in Atlantic Canada, 2014 to 2020: spatial–temporal variations of clones and predicted meningococcal B vaccine coverage6
Clostridioides difficile detection and infection in children: are they just small adults?6
Surveillance of carbapenem-resistant Klebsiella pneumoniae in a paediatric hospital in China revealed the dynamics of carbapenemase and the prevalence of ST2735 K. pneumoniae6
In vitro synergistic activity of aztreonam (AZT) plus novel and old β-lactamase inhibitor combinations against metallo-β-lactamase-producing AZT-resistant Enterobacterales6
Network pharmacology and molecular docking analysis on mechanisms of Tibetan Hongjingtian (Rhodiola crenulata) in the treatment of COVID-196
Susceptibility of Gram-negative bacteria from blood cultures assessed by a rapid antimicrobial susceptibility assay, the VITEK® Reveal™: a preliminary study6
Altered intestinal Streptococcus anginosus and 5α-reductase gene levels in patients with hepatocellular carcinoma and elevated Bacteroides stercoris in atezolizumab/bevacizumab non-responders6
Population structure, antibiotic resistance and molecular characteristics of Streptococcus pneumoniae causing invasive disease in Hubei, China6
Efficacy of ceftobiprole in a murine model of bacteremia and disseminated infection6
JMM Profile: West Nile virus6
Next-generation sequencing for the diagnosis of Listeria monocytogenes meningoencephalitis: a case series of five consecutive patients6
Treating autism spectrum disorder by intervening with gut microbiota6
Antimicrobial spectrum against wound pathogens and cytotoxicity of star-arranged poly-l-lysine-based antimicrobial peptide polymers6
Sensitivity and specificity of DPP® Fever Panel II Asia in the diagnosis of malaria, dengue and melioidosis6
JMM Profile: Brachyspira species: the causative agent of Avian Intestinal Spirochaetosis6
Impact of the COVID-19 restrictions on the epidemiology of Cryptosporidium spp. in England and Wales, 2015–2021: a time series analysis6
Effect of proton pump inhibitors on susceptibility and melanogenesis of Sporothrix species5
Preliminary view of the distribution and spread of the plasmid-mediated resistance genes in Glaesserella parasuis5
16S rDNA analysis of osteoporotic rats treated with osteoking5
A comparative analysis of the second and third wave of the Covid-19 pandemic: an experience from a tertiary care hospital in Western India5
Rapid determination of antimicrobial susceptibility of Gram-negative bacteria from clinical blood cultures using a scattered light-integrated collection device5
Microbiological and molecular screening of Candida spp. isolated from genital tract of asymptomatic pregnant women5
Lower gastrointestinal tract dysbiosis in persistent critical illness: a systematic review5
Evaluation of antioxidant status and oxidative stress markers in HTLV-1 infected individuals: correlation with the severity of virus-induced complications5
A retrospective cross-sectional observational study of SARS-CoV-2 reinfection in La Ribera Health Department, Valencia, Spain5
Advancing rapid diagnostics for bloodstream infections: a perspective on scattered light integrated collection technology5
First identification of bla NDM-5 producing Escherichia coli from neonates and a HIV infected adult in Tanzania5
Molecular characterization of Pseudomonas aeruginosa from diabetic foot infections in Tunisia5
JMM Profile: Vibrio cholerae: an opportunist of human crises5
Complete genome identified of clinical isolate Prototheca5
Surveillance of invasive meningococcal disease in southern Brazil: considerations of an immunization programme5
PET-CT for characterising TB infection (TBI) in immunocompetent subjects: a systematic review5
Absence of SARS-CoV-2 in the air and on the surfaces within the school environment5
Commercial molecular diagnostic methods in infectious diseases: keeping up with the pathogens5
High seroprevalence of anti-DENV IgM in blood donors in an early outbreak in the Federal District of Brazil, 20195
Evaluation of the efficacy of tongue swab and saliva as samples for testing COVID-19 infection in symptomatic cases in comparison with nasopharyngeal swab5
Prediction of genome-wide imipenem resistance features in Klebsiella pneumoniae using machine learning5
Emergence of Neisseria meningitidis W South American sublineage strain variant in Brazil: disease and carriage5
JMM Profile: Sindbis virus, a cause of febrile illness and arthralgia5
Evaluation of GeneXpert MTB/Rif Ultra assay performance on formalin-fixed paraffin-embedded tissues for Mycobacterium tuberculosis detection5
Corrigendum: Lactobacillus fermentum strains of dairy product origin adhere to mucin and survive digestive juices5
Combining Gram stain and 16S qPCR improved diagnostic accuracy for suspected pneumonia and could become a new metric in the rapid diagnosis of lower respiratory tract infections5
Building an antimicrobial stewardship model for a public-sector hospital: a pre-implementation study5
Thrombotic storm in coronavirus disease 2019: from underlying mechanisms to its management5
Commercial farmed swine harbour a variety of pathogenic bacteria and antimicrobial resistance genes5
Evaluation of whole-genome sequencing protocols for detection of antimicrobial resistance, virulence factors and mobile genetic elements in antimicrobial-resistant bacteria5
Assessing antimicrobial resistance profiles of Salmonella enterica in the pork production system5
Clinically healthy household dogs and cats as carriers of multidrug-resistant Salmonella enterica with variable R plasmids5
Bone and joint tuberculosis in paediatrics: a 13-year retrospective study5
Bacteria associated with infectious keratoconjunctivitis outbreak in confined lambs5
Evaluating the accuracy of the MBT Lipid Xtract Kit for assessing colistin resistance in comparison to broth microdilution5
BCG and BCGΔBCG1419c transiently protect hypersusceptible I/St mice and induce different influx of macrophages and neutrophils during pulmonary tuberculosis5
Molecular typing of reduced susceptibility of Acinetobacter calcoaceticus–baumannii complex to Chlorhexidine in Turkey by pulsed-field gel electrophoresis5
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