SIAM Journal on Applied Mathematics

Article	Citations
Detecting and Resetting Tipping Points to Create More HIV Post-Treatment Controllers with Bifurcation and Sensitivity Analysis	66
A Diffuse Interface Model for Cell Blebbing Including Membrane-Cortex Coupling with Linker Dynamics	47
Diffraction by a Right-Angled No-Contrast Penetrable Wedge Revisited: A Double Wiener--Hopf Approach	46
A Stochastic Framework for Atomistic Fracture	35
Construction and Numerical Assessment of Local Absorbing Boundary Conditions for Heterogeneous Time-Harmonic Acoustic Problems	34
Modelling of Initially Stressed Solids: Structure of the Energy Density in the Incompressible Limit	32
Qualitative and Numerical Aspects of a Motion of a Family of Interacting Curves in Space	22
Vaccinating According to the Maximal Endemic Equilibrium Achieves Herd Immunity	22
Dissipation of Traffic Jams Using a Single Autonomous Vehicle on a Ring Road	21
An Integro-Differential Model of Cadmium Yellow Photodegradation	19
A New Monotonicity for Principal Eigenvalues with Applications to Time-Periodic Patch Models	19
Addressing Complex Boundary Conditions of Miscible Flow and Transport in Two and Three Dimensions with Application to Optimal Control	19
High Spots for the Ice-Fishing Problem with Surface Tension	18
Wobbling of Pedestrian Bridges	18
Reconstruction of an Interface Between the Fluid and Piezoelectric Solid by Acoustic Measurements	18
Mean-Field Approximation of Dynamics on Networks	17
Bound-Preserving Finite-Volume Schemes for Systems of Continuity Equations with Saturation	17
Spectral Diffusion of MMT Model with Condensate in Two or Higher Dimensions	17
Analysis and Simulation of a Nonlocal Gray–Scott Model	16
Fast Solver for Diffusive Transport Times on Dynamic Intracellular Networks	16
Acoustics of a Partially Partitioned Narrow Slit Connected to a Half-Plane: Case Study for Exponential Quasi-Bound States in the Continuum and their Resonant Excitation	14
Analysis of a Toy Model for Optimal Crop Protection	13
Nonlinear Monotone Energy Stability of Plane Shear Flows: Joseph or Orr Critical Thresholds?	13
Generalized Schwarz Integral Formulas for Multiply Connected Domains	13
Localization and Delocalization of Ground States of Bose--Einstein Condensates Under Disorder	13

Maxwell’s Equations with Nonlinear Inhomogeneous Constitutive Relation: Guided Waves in a Film Filled with Inhomogeneous Kerr Medium	12
Critical Patch Size of a Two-Population Reaction Diffusion Model Describing Brain Tumor Growth	12
Robustness of Solutions of Almost Every System of Equations	12
Optimizing Noisy Complex Systems Liable to Failure	12
Large Deviations for Additive Functionals of Reflected Jump-Diffusions	12
Wave Propagation On a String Resting on a General Nonlinear Substrate	12
Phase Transition in a Periodic Tubular Structure	12
Fixation Dynamics on Multilayer Networks	11
Phase Reduction of Waves, Patterns, and Oscillations Subject to Spatially Extended Noise	11
Applications of Mathematical Programming to Genetic Biocontrol	11
Linear and Nonlinear Speed Selection for Traveling Waves in Quadratic Autocatalytic Systems with Complexing Agents	11
Bifurcation Analysis in a Tumor-Immune System Interaction Model with Dendritic Cell Therapy and Immune Response Delay	10
A Two-Way Coupled Model of Visco-Thermo-Acoustic Effects in Photoacoustic Trace Gas Sensors	10
Incorporating Drug Adherence Stochasticity Into Pharmacokinetics and Pharmacodynamics to Understand the HIV Transmission Dynamics Through a MultiScale System	10
Pseudodifferential Models for Ultrasound Waves with Fractional Attenuation	10
Existence and Stability of a Boundary Layer with an Interior Spike in the Singularly Perturbed Shadow Gierer–Meinhardt System	10
Multiwindow Approaches for Direct and Stable STFT Phase Retrieval	10
Averaging of a Stochastic Slow-Fast Model for Population Dynamics: Application to the Development of Ovarian Follicles	9
Modeling Spatial Waves of Wolbachia Invasion for Controlling Mosquito-Borne Diseases	9
Ellipsoidal Embeddings of Graphs	9
Singularities of Capillary-Gravity Waves on Dielectric Fluid Under Normal Electric Fields	9
Wasserstein Hamiltonian Flow with Common Noise on Graph	9
Selection Mechanism in Non-Newtonian Saffman–Taylor Fingers	9
On a Spatial Mosquito-Borne Disease Model with Density-Dependent Dispersal	9
Dynamic Behaviors of a Periodic System with Threshold Policy-Guided Periodic and Intermittent Therapy of Tumor	9
Modeling Electrode Heterogeneity in Lithium-Ion Batteries: Unimodal and Bimodal Particle-Size Distributions	9
Dynamics of a Reaction-Diffusion SIS Epidemic Model with a Control Zone	9
An Exact Stochastic Simulation Method for Fractional Order Compartment Models	9
Geometry-Based Approximation of Waves in Complex Domains	9
Iteratively Adaptive Identification of Parameters Solely Using Short-Term Data of Transient Dynamics	9
Jacobi Processes with Jumps as Neuronal Models: A First Passage Time Analysis	9
Extreme First Passage Times for Populations of Identical Rare Events	8
A Novel Derivation of Rigorous Macroscopic Limits from a Micro-Meso Description of Signal-Triggered Cell Migration in Fibrous Environments	8
Recovery of the Order of Derivation for Fractional Diffusion Equations in an Unknown Medium	8
On an Inverse Problem of the Generalized Bathtub Model of Network Trip Flows	8
Mathematical Models for Nonlinear Ultrasound Contrast Imaging with Microbubbles	8
Asymptotic and Transient Dynamics of a Stoichiometric Algal Growth Model with Two-Stage Phosphate Uptake	8
Computation of Riesz \(\boldsymbol{\alpha }\)-Capacity \(\boldsymbol{\textrm{C}}_{\boldsymbol{\alpha}}\) of General Sets in \(\boldsymbol{\mathbb{R}}^{\boldsymbol{d}}\) Using Stable Random Walks	8
Calculation of Expected Reward Rate in a Two-Alternative Decision Process	8
Electromagnetic Waves Generated by a Hybrid Dielectric-Plasmonic Dimer	8
Evolution of Derivative Singularities in Hyperbolic Quasilinear Systems of Conservation Laws	8
Slow Migration of Brine Inclusions in First-Year Sea Ice	8
Conservation Laws with Nonlocal Velocity: The Singular Limit Problem	8
Fourier Representation of the Diffusion MRI Signal Using Layer Potentials	8
Quasi-three-dimensional Viscous Steady Streaming in a Rectangular Channel past a Cylinder	7
Classifying Minimum Energy States for Interacting Particles: Spherical Shells	7
Evolutionary Attractors in the Chemostat Model	7
Fractal and Hurst Effects in Solenoidal and Irrotational Vector Random Fields	7
Constitutive Relations for Granular Flow That Include the Three Flow Regimes of Chialvo et al.	7
Tristability and Elite Control in an HIV Infection Model with Natural Killer Cells Effect and Immune Impairment	7

Accumulation Time of Diffusion in a 3D Singularly Perturbed Domain	7
The Impact of Fear and Behavior Response to Established and Novel Diseases	7
Parametric Resonance for Enhancing the Rate of Metastable Transition	7
First Passage Time of Loop Formation in Chromatin Chains	6
A Conservation Law for Evolving Borehole Geometry in Drilling	6
Tangential Cone Condition for the Full Waveform Forward Operator in the Viscoelastic Regime: The Nonlocal Case	6
Asymptotic Relaxation of Moment Equations for a Multi-species, Homogeneous BGK Model	6
Passive Inverse Obstacle Scattering Problems for the Helmholtz Equation	6
Simultaneous Reconstruction of Optical and Acoustical Properties in Photoacoustic Imaging Using Plasmonics	6
Resource-Driven Pattern Formation in Consumer-Resource Systems with Asymmetric Dispersal on a Plane	6
Wearable Data Assimilation to Estimate the Circadian Phase	6
Dirac Points for the Honeycomb Lattice with Impenetrable Obstacles	6
Linearized Calderón Problem: Reconstruction of Unbounded Perturbations in Three Dimensions	6
Optimal Epidemic Control by Social Distancing and Vaccination of an Infection Structured by Time Since Infection: The COVID-19 Case Study	6
Generic Convergence to Periodic Orbits for Monotone Flows with Respect to 2-Cones and Applications to SEIRS Models	5
Path Integration and the Structural Sensitivity Problem in Partially Specified Biological Models	5
Tipping Points in Seed Dispersal Mutualism Driven by Environmental Stochasticity	5
On Geometrical Properties of Electromagnetic Transmission Eigenfunctions and Artificial Mirage	5
Continuous and Discrete Baroclinic Modes in Continuously Varying Stratification	5
Dissipative Dynamics of Volterra Disclinations	5
Instability of Hysteretic Phase Interfaces in a Mean-Field Model with Inhomogeneities	5
Signal Reconstruction from Phase-Only Measurements: Uniqueness Condition, Minimal Measurement Number and Beyond	5
Modeling and Optimal Control of a Two-Species Bioproducing Microbial Consortium	5
Local Bifurcation Analysis of Circular von-Kármán Plate with Kirchhoff Rod Boundary	5
Modularity Maximization for Graphons	5
Apodizer Design to Efficiently Couple Light into a Fiber Bragg Grating	5
Frame Hydrodynamics of Biaxial Nematics from Molecular-Theory-Based Tensor Models	5
Defect Resonances of Truncated Crystal Structures	5
Contact Adapting Electrode Model for Electrical Impedance Tomography	5
Mean Field Analysis of Hypergraph Contagion Models	5
Coarse-Grained Stochastic Model of Myosin-Driven Vesicles into Dendritic Spines	5
The Repulsion Property in Nonlinear Elasticity and a Numerical Scheme to Circumvent It	5
Far-from-Equilibrium Traveling Pulses in Sloped Semiarid Environments Driven by Autotoxicity Effects	5
Viscous Regularization of the MHD Equations	5
Uniform Asymptotic Approximations for the Phase Plane Trajectories of the SIR Model with Vital Dynamics	5
Bifurcation-Induced Species Coexistence in a Stage-Structured Intraguild Predation Model	5
Sliding-Mode Theory Under Feedback Constraints and the Problem of Epidemic Control	5
The KP Equation of Plane Elastodynamics	5
Connecting GANs, Mean-Field Games, and Optimal Transport	4
Fast Anthropogenic Environmental Change Can Cause the Collapse of Fishery Ecosystems	4
Discrete Inverse Method for Extracting Disease Transmission Rates from Accessible Infection Data	4
Mathematical Modeling and Solution Landscape Reveal Cancer Progression Dynamics in Tumor Ecological Microenvironment	4
Phase Separation in Systems of Interacting Active Brownian Particles	4
Sparse Optimal Control of Pattern Formations for an SIR Reaction-Diffusion Epidemic Model	4
The Carleman Contraction Mapping Method for a Coefficient Inverse Problem of the Epidemiology	4
Finite Amplitude Analysis of Poiseuille Flow in Fluid Overlying Porous Domain	4
Agro-Ecological Control of a Pest-Host System: Preventing Spreading	4
On the Identifiability of Nonlocal Interaction Kernels in First-Order Systems of Interacting Particles on Riemannian Manifolds	4
Localization of Moving Sources: Uniqueness, Stability, and Bayesian Inference	4
Modeling Floral and Arthropod Electrostatics Using a Two-Domain AAA-Least Squares Algorithm	4
Appropriate State-Dependent Friction Coefficient Accelerates Kinetic Langevin Dynamics	4
Optimal Stochastic Control Problem for a Carbon Emission Reduction Process	4
Splitting Reactions Preserves Nondegenerate Behaviors in Chemical Reaction Networks	4
A Spatiotemporal Model for the Effects of Toxicants on Populations in a Polluted River	4
Analysis of the Lévy Flight Foraging Hypothesis in \(\mathbb{R}^{n}\) and Unreliability of the Most Rewarding Strategies	4
An Inversion Scheme for Elastic Diffraction Tomography Based on Mode Separation	4
On A Transient Nonlinear One-Dimensional Reaction-Diffusion Equation with A Point-Source Initial Condition	4
Inference of Interaction Kernels in Mean-Field Models of Opinion Dynamics	4
Multiplicity of Endemic Equilibria for a Diffusive SIS Epidemic Model with Mass-Action	4
A Continuous Integral Model for White Blood Cell Production	4
Local Perception and Learning Mechanisms in Resource-Consumer Dynamics	4
Bayesian Experimental Design for Head Imaging by Electrical Impedance Tomography	4
Global Dynamics and Pattern Formation in a Diffusive Population-Toxicant Model with Negative Toxicant-Taxis	4
Inverse Source Problems for the Stochastic Wave Equations: Far-Field Patterns	4
Pattern Formation and Oscillations in Nonlinear Random Walks on Networks	4
Near-Exact Radiating Fins via Boundary Tracing	3
A Matrix Basis Formulation for the Dyadic Green’s Functions of Maxwell’s Equations in Layered Media	3
Spurious Quasi-Resonances in Boundary Integral Equations for the Helmholtz Transmission Problem	3
Twisted TMDs in the Small-Angle Limit: Exponentially Flat and Trivial Bands	3
Standing Waves of Reaction-Diffusion Equations on an Unbounded Graph with Two Vertices	3
General Reconstruction of Elastic Strain Fields from their Longitudinal Ray Transform	3
Computational Translation Framework Identifies Biochemical Reaction Networks with Special Topologies and Their Long-Term Dynamics	3
A Stable Imaging Functional for Anisotropic Periodic Media in Electromagnetic Inverse Scattering	3
Exact Switching Time Distributions for Autoregulated Gene Expression Models with mRNA and Protein Descriptions	3
On Spatial Cohesiveness of Second-Order Self-Propelled Swarming Systems	3
The Beavers--Joseph Interface Boundary Condition is Well Approximated by the Beavers--Joseph--Saffman--Jones Interface Boundary Condition	3
An Efficient Model For Scaffold Mediated Bone Regeneration	3
Scaling Limit of the Kuramoto Model on Random Geometric Graphs	3
Inverse Source Problem for Acoustically-Modulated Electromagnetic Waves	3
Dynamics of an LPAA Model for Tribolium Growth: Insights into Population Chaos	3

Nontrivial Traveling Waves of Phage-Bacteria Models in Different Media Types	3
Modeling Electrode Heterogeneity in Lithium-Ion Batteries: Unimodal and Bimodal Particle-Size Distributions	3
Target Signatures for Anisotropic Screens in Electromagnetic Scattering	3
An Asymptotic Analysis of Space Charge Layers in a Mathematical Model of a Solid Electrolyte	3
Realistic Pattern Formations on Surfaces by Adding Arbitrary Roughness	3
Effective Medium Theory for Embedded Obstacles in Elasticity with Applications to Inverse Problems	3
The BCC Lattice in a Long-Range Interaction System	3
Infinite Energy Cavitating Solutions: A Variational Approach	3
Normal Forms, Differentiable Conjugacies, and Elementary Bifurcations of Maps	3
A Chemostat Model with Variable Dilution Rate Due to Biofilm Growth	3
Derivation and Stability Analysis of a Macroscopic Multilane Model for Traffic Flow	3
Periodic Dynamics of a Reaction-Diffusion-Advection Model with Michaelis–Menten Type Harvesting in Heterogeneous Environments	3
Power-Engine-Load Form for Dynamic Absolute Concentration Robustness	3
Asymptotic Modeling of a Skin Effect in Magnetic Conductors	3
Metropolized Forest Recombination for Monte Carlo Sampling of Graph Partitions	3
KP-II Approximation for a Scalar Fermi–Pasta–Ulam System on a 2D Square Lattice	3
Exponential Asymptotics and Higher-Order Stokes Phenomenon in Singularly Perturbed ODEs	3
A Homogenized Model for Dispersive Transport and Sorption in a Heterogeneous Porous Medium	3
Geometric Theory of Distribution Shapes for Autoregulatory Gene Circuits	3
Mathematical Analysis of a Subsurface Flow Model	3
Transport Models for Wave Propagation in Scattering Media with Nonlinear Absorption	3
Reconstruction of Multiscale Elastic Sources from Multifrequency Sparse Far Field Patterns	3
Long-Time Dynamics of a Competition Model with Nonlocal Diffusion and Free Boundaries: Chances of Successful Invasion	3
A Modified Landau–de Gennes Theory for Smectic Liquid Crystals: Phase Transitions and Structural Transitions	2
Time and Energy Costs for Synchronization of Kuramoto-Oscillator Networks With or Without Noise Perturbation	2
Finite Population Size Effects on Optimal Communication for Social Foragers	2
Why Increase of Heterogeneity Signals Pre-Deterioration During Tumor Progression: A Unified Mathematical Model	2
Global Dynamics of Reaction-Diffusion Systems with a Time-Varying Domain	2
The Combinatorial Code and the Graph Rules of Dale Networks	2
Time- Versus Frequency-Domain Inverse Elastic Scattering: Theory and Experiment	2
A Maxwell–Ampère Nernst–Planck Framework for Modeling Charge Dynamics	2
Erratum: Classical and Quantum Random-Walk Centrality Measures in Multilayer Networks	2
The Role of Clearance in Neurodegenerative Diseases	2
Analyzing and Mimicking the Optimized Flight Physics of Soaring Birds: A Differential Geometric Control and Extremum Seeking System Approach with Real Time Implementation	2
Spatial Dynamics with Heterogeneity	2
Modeling, Inference, and Prediction in Mobility-Based Compartmental Models for Epidemiology	2
Diffraction and Interaction of Interfacial Solitons in a Two-Layer Fluid of Great Depth	2
A New Perfectly Matched Layer Method for the Helmholtz Equation in Nonconvex Domains	2
Combined Field-Only Boundary Integral Equations for PEC Electromagnetic Scattering Problem in Spherical Geometries	2
The Velocity Field and Birkhoff–Rott Integral for Nondecaying, Nonperiodic Vortex Sheets	2
On the Validity of the Tight-Binding Method for Describing Systems of Subwavelength Resonators	2
Linear Quadratic Regulation Control for Falling Liquid Films	2
A Hierarchy of Kinetic Discrete-Velocity Models for Traffic Flow Derived from a Nonlocal Prigogine–Herman Model	2
A Gaussian Process Model for Insulin Secretion Reconstruction with Uncertainty Quantification: Applications in Cystic Fibrosis	2
Two Novel proofs of Spectral Monotonicity of Perturbed Essentially Nonnegative Matrices with Applications in Population Dynamics	2
An Asymptotic Model for Gas-Solid Flow in a Countercurrent Moving Bed Reactor	2
A Stochastic Version of the Hopfield–Ninio Kinetic Proofreading Model	2
Diffraction of Acoustic Waves by a Wedge of Point Scatterers	2
A PML Method for Signal-Propagation Problems in Axon	2
On the Dynamics of a Diffusive Foot-and-Mouth Disease Model with Nonlocal Infections	2
Stability of a Nonlocal Traffic Flow Model for Connected Vehicles	2
Modified Sampling Method with Near Field Measurements	2
Soil Searching by an Artificial Root	2
Near-Collision Dynamics in a Noisy Car-Following Model	2
PB-Steric Equations: A General Model of Poisson–Boltzmann Equations	2
Probabilistic Modeling of Car Traffic Accidents	2
Identifying Active Anomalies in a Multilayered Medium by Passive Measurement in EIT	2
Generating Customized Field Concentration via Virtual Surface Transmission Resonance	2
A Domain Decomposition Method for Solution of a PDE-Constrained Generalized Nash Equilibrium Model of Biofilm Community Metabolism	2
One-Dimensional Ferronematics in a Channel: Order Reconstruction, Bifurcations, and Multistability	2
Targeting Influence in a Harmonic Opinion Model	2
Paraxial Wave Propagation in Random Media with Long-Range Correlations	2
Steady Wind-Generated Gravity-Capillary Waves on Viscous Liquid Film Flows	2
A Three-Dimensional Model of Skeletal Muscle Tissues	2
A Density Description of a Bounded-Confidence Model of Opinion Dynamics on Hypergraphs	2
First Hitting Time of a One-Dimensional Lévy Flight to Small Targets	2
Flow Measurement: An Inverse Problem Formulation	2
Radial Amplitude Equations for Fully Localized Planar Patterns	2
Hypernetworks: Cluster Synchronization Is a Higher-Order Effect	2
The Dynamics of a Collapsing Polyelectrolyte Gel	2
Optimal Intervention Strategies for Minimizing Total Incidence During an Epidemic	2
Stability and Eigenvalue Asymptotics of Multi-Dimensional Fully Magnetic Effected Piezoelectric System with Friction-Type Infinite Memory	2
An Axisymmetric Problem for a Patch Loaded Material Surface Attached to the Boundary of an Elastic Semi-space	2
Existence, Uniqueness, and Numerical Modeling of Wine Fermentation Based on Integro-Differential Equations	2
A Numerical Scheme and Validation of the Asymptotic Energy Release Rate Formula for a 2D Gel Thin-Film Debonding Problem	2
Cover Times of Many Diffusive or Subdiffusive Searchers	2
Localization of Defects Via Residence Time Measures	2
Density Fluctuations in Stochastic Kinematic Flows	2
Information-Open Electromagnetic Cloaks: Mathematical Analysis and Numerical Simulations	2
A Homogenized Model of Fluid-String Interaction	2
Equivalent Formulations of the Oxygen Depletion Problem, Other Implicit Moving Boundary Value Problems, and Implications for Numerical Approximation	2
Asymmetric Deformations of a Perturbed Spherical Bubble in an Incompressible Fluid	2
Maximizing Metapopulation Growth Rate and Biomass in Stream Networks	2
Topological Interface Modes in Systems with Damping	2