SIAM Journal on Applied Mathematics

Article	Citations
Vaccinating According to the Maximal Endemic Equilibrium Achieves Herd Immunity	58
Addressing Complex Boundary Conditions of Miscible Flow and Transport in Two and Three Dimensions with Application to Optimal Control	42
Dissipation of Traffic Jams Using a Single Autonomous Vehicle on a Ring Road	41
A Diffuse Interface Model for Cell Blebbing Including Membrane-Cortex Coupling with Linker Dynamics	30
A Stochastic Framework for Atomistic Fracture	27
Diffraction by a Right-Angled No-Contrast Penetrable Wedge Revisited: A Double Wiener--Hopf Approach	27
Construction and Numerical Assessment of Local Absorbing Boundary Conditions for Heterogeneous Time-Harmonic Acoustic Problems	20
Modelling of Initially Stressed Solids: Structure of the Energy Density in the Incompressible Limit	19
Detecting and Resetting Tipping Points to Create More HIV Post-Treatment Controllers with Bifurcation and Sensitivity Analysis	18
Fast Solver for Diffusive Transport Times on Dynamic Intracellular Networks	16
A New Monotonicity for Principal Eigenvalues with Applications to Time-Periodic Patch Models	16
Analysis and Simulation of a Nonlocal Gray–Scott Model	16
Qualitative and Numerical Aspects of a Motion of a Family of Interacting Curves in Space	16
Wobbling of Pedestrian Bridges	16
Generalized Schwarz Integral Formulas for Multiply Connected Domains	15
Analysis of a Toy Model for Optimal Crop Protection	15
High Spots for the Ice-Fishing Problem with Surface Tension	15
Reconstruction of an Interface Between the Fluid and Piezoelectric Solid by Acoustic Measurements	14
Nonlinear Monotone Energy Stability of Plane Shear Flows: Joseph or Orr Critical Thresholds?	13
Spectral Diffusion of MMT Model with Condensate in Two or Higher Dimensions	12
Acoustics of a Partially Partitioned Narrow Slit Connected to a Half-Plane: Case Study for Exponential Quasi-Bound States in the Continuum and their Resonant Excitation	12
Optimizing Noisy Complex Systems Liable to Failure	11
Bound-Preserving Finite-Volume Schemes for Systems of Continuity Equations with Saturation	11
Robustness of Solutions of Almost Every System of Equations	11
Applications of Mathematical Programming to Genetic Biocontrol	11

Localization and Delocalization of Ground States of Bose--Einstein Condensates Under Disorder	11
Wave Propagation On a String Resting on a General Nonlinear Substrate	11
Phase Transition in a Periodic Tubular Structure	11
Phase Reduction of Waves, Patterns, and Oscillations Subject to Spatially Extended Noise	10
Critical Patch Size of a Two-Population Reaction Diffusion Model Describing Brain Tumor Growth	10
Maxwell’s Equations with Nonlinear Inhomogeneous Constitutive Relation: Guided Waves in a Film Filled with Inhomogeneous Kerr Medium	10
Pseudodifferential Models for Ultrasound Waves with Fractional Attenuation	10
Large Deviations for Additive Functionals of Reflected Jump-Diffusions	10
Existence and Stability of a Boundary Layer with an Interior Spike in the Singularly Perturbed Shadow Gierer–Meinhardt System	10
Modeling Spatial Waves of Wolbachia Invasion for Controlling Mosquito-Borne Diseases	9
Fixation Dynamics on Multilayer Networks	9
Selection Mechanism in Non-Newtonian Saffman–Taylor Fingers	9
Bifurcation Analysis in a Tumor-Immune System Interaction Model with Dendritic Cell Therapy and Immune Response Delay	9
A Two-Way Coupled Model of Visco-Thermo-Acoustic Effects in Photoacoustic Trace Gas Sensors	9
On a Spatial Mosquito-Borne Disease Model with Density-Dependent Dispersal	9
An Exact Stochastic Simulation Method for Fractional Order Compartment Models	9
Geometry-Based Approximation of Waves in Complex Domains	8
Dynamics of a Reaction-Diffusion SIS Epidemic Model with a Control Zone	8
Iteratively Adaptive Identification of Parameters Solely Using Short-Term Data of Transient Dynamics	8
Extreme First Passage Times for Populations of Identical Rare Events	8
Recovery of the Order of Derivation for Fractional Diffusion Equations in an Unknown Medium	8
Evolution of Derivative Singularities in Hyperbolic Quasilinear Systems of Conservation Laws	8
Averaging of a Stochastic Slow-Fast Model for Population Dynamics: Application to the Development of Ovarian Follicles	8
Dynamic Behaviors of a Periodic System with Threshold Policy-Guided Periodic and Intermittent Therapy of Tumor	8
Ellipsoidal Embeddings of Graphs	8
A Novel Derivation of Rigorous Macroscopic Limits from a Micro-Meso Description of Signal-Triggered Cell Migration in Fibrous Environments	7
Asymptotic and Transient Dynamics of a Stoichiometric Algal Growth Model with Two-Stage Phosphate Uptake	7
Parametric Resonance for Enhancing the Rate of Metastable Transition	7
Wasserstein Hamiltonian Flow with Common Noise on Graph	7
Singularities of Capillary-Gravity Waves on Dielectric Fluid Under Normal Electric Fields	7
Conservation Laws with Nonlocal Velocity: The Singular Limit Problem	7
Modeling Electrode Heterogeneity in Lithium-Ion Batteries: Unimodal and Bimodal Particle-Size Distributions	7
Jacobi Processes with Jumps as Neuronal Models: A First Passage Time Analysis	7
Computation of Riesz \(\boldsymbol{\alpha }\)-Capacity \(\boldsymbol{\textrm{C}}_{\boldsymbol{\alpha}}\) of General Sets in \(\boldsymbol{\mathbb{R}}^{\boldsymbol{d}}\) Using Stable Random Walks	7
Slow Migration of Brine Inclusions in First-Year Sea Ice	6
Wearable Data Assimilation to Estimate the Circadian Phase	6
The Impact of Fear and Behavior Response to Established and Novel Diseases	6
Classifying Minimum Energy States for Interacting Particles: Spherical Shells	6
Quasi-three-dimensional Viscous Steady Streaming in a Rectangular Channel past a Cylinder	6
Fourier Representation of the Diffusion MRI Signal Using Layer Potentials	6
Tristability and Elite Control in an HIV Infection Model with Natural Killer Cells Effect and Immune Impairment	6
Accumulation Time of Diffusion in a 3D Singularly Perturbed Domain	6
Constitutive Relations for Granular Flow That Include the Three Flow Regimes of Chialvo et al.	6
Mathematical Models for Nonlinear Ultrasound Contrast Imaging with Microbubbles	6
Calculation of Expected Reward Rate in a Two-Alternative Decision Process	6
Linearized Calderón Problem: Reconstruction of Unbounded Perturbations in Three Dimensions	6
Dirac Points for the Honeycomb Lattice with Impenetrable Obstacles	6
Mean Field Analysis of Hypergraph Contagion Models	5
Fractal and Hurst Effects in Solenoidal and Irrotational Vector Random Fields	5
Asymptotic Relaxation of Moment Equations for a Multi-species, Homogeneous BGK Model	5

Dissipative Dynamics of Volterra Disclinations	5
Frame Hydrodynamics of Biaxial Nematics from Molecular-Theory-Based Tensor Models	5
Contact Adapting Electrode Model for Electrical Impedance Tomography	5
Signal Reconstruction from Phase-Only Measurements: Uniqueness Condition, Minimal Measurement Number and Beyond	5
Bifurcation-Induced Species Coexistence in a Stage-Structured Intraguild Predation Model	5
Tangential Cone Condition for the Full Waveform Forward Operator in the Viscoelastic Regime: The Nonlocal Case	5
Continuous and Discrete Baroclinic Modes in Continuously Varying Stratification	5
Viscous Regularization of the MHD Equations	5
Far-from-Equilibrium Traveling Pulses in Sloped Semiarid Environments Driven by Autotoxicity Effects	5
Uniform Asymptotic Approximations for the Phase Plane Trajectories of the SIR Model with Vital Dynamics	5
Simultaneous Reconstruction of Optical and Acoustical Properties in Photoacoustic Imaging Using Plasmonics	5
Resource-Driven Pattern Formation in Consumer-Resource Systems with Asymmetric Dispersal on a Plane	5
Defect Resonances of Truncated Crystal Structures	5
Modularity Maximization for Graphons	5
Optimal Epidemic Control by Social Distancing and Vaccination of an Infection Structured by Time Since Infection: The COVID-19 Case Study	5
Sliding-Mode Theory Under Feedback Constraints and the Problem of Epidemic Control	5
Apodizer Design to Efficiently Couple Light into a Fiber Bragg Grating	4
Local Bifurcation Analysis of Circular von-Kármán Plate with Kirchhoff Rod Boundary	4
Generic Convergence to Periodic Orbits for Monotone Flows with Respect to 2-Cones and Applications to SEIRS Models	4
Coarse-Grained Stochastic Model of Myosin-Driven Vesicles into Dendritic Spines	4
Pattern Formation and Oscillations in Nonlinear Random Walks on Networks	4
Analysis of the Lévy Flight Foraging Hypothesis in \(\mathbb{R}^{n}\) and Unreliability of the Most Rewarding Strategies	4
On Geometrical Properties of Electromagnetic Transmission Eigenfunctions and Artificial Mirage	4
Tipping Points in Seed Dispersal Mutualism Driven by Environmental Stochasticity	4
The KP Equation of Plane Elastodynamics	4
On A Transient Nonlinear One-Dimensional Reaction-Diffusion Equation with A Point-Source Initial Condition	4
An Inversion Scheme for Elastic Diffraction Tomography Based on Mode Separation	4
The Repulsion Property in Nonlinear Elasticity and a Numerical Scheme to Circumvent It	4
Instability of Hysteretic Phase Interfaces in a Mean-Field Model with Inhomogeneities	4
Modeling and Optimal Control of a Two-Species Bioproducing Microbial Consortium	4
Path Integration and the Structural Sensitivity Problem in Partially Specified Biological Models	4
On the Identifiability of Nonlocal Interaction Kernels in First-Order Systems of Interacting Particles on Riemannian Manifolds	4
Finite Amplitude Analysis of Poiseuille Flow in Fluid Overlying Porous Domain	4
Geometric Theory of Distribution Shapes for Autoregulatory Gene Circuits	3
Near-Exact Radiating Fins via Boundary Tracing	3
Realistic Pattern Formations on Surfaces by Adding Arbitrary Roughness	3
Periodic Dynamics of a Reaction-Diffusion-Advection Model with Michaelis–Menten Type Harvesting in Heterogeneous Environments	3
Local Perception and Learning Mechanisms in Resource-Consumer Dynamics	3
Mathematical Modeling and Solution Landscape Reveal Cancer Progression Dynamics in Tumor Ecological Microenvironment	3
Splitting Reactions Preserves Nondegenerate Behaviors in Chemical Reaction Networks	3
Global Dynamics and Pattern Formation in a Diffusive Population-Toxicant Model with Negative Toxicant-Taxis	3
Phase Separation in Systems of Interacting Active Brownian Particles	3
Multiplicity of Endemic Equilibria for a Diffusive SIS Epidemic Model with Mass-Action	3
Long-Time Dynamics of a Competition Model with Nonlocal Diffusion and Free Boundaries: Chances of Successful Invasion	3
Computational Translation Framework Identifies Biochemical Reaction Networks with Special Topologies and Their Long-Term Dynamics	3
On Spatial Cohesiveness of Second-Order Self-Propelled Swarming Systems	3
Normal Forms, Differentiable Conjugacies, and Elementary Bifurcations of Maps	3
Agro-Ecological Control of a Pest-Host System: Preventing Spreading	3
Connecting GANs, Mean-Field Games, and Optimal Transport	3
The Carleman Contraction Mapping Method for a Coefficient Inverse Problem of the Epidemiology	3
Sparse Optimal Control of Pattern Formations for an SIR Reaction-Diffusion Epidemic Model	3
Localization of Moving Sources: Uniqueness, Stability, and Bayesian Inference	3
Inference of Interaction Kernels in Mean-Field Models of Opinion Dynamics	3
Reconstruction of Multiscale Elastic Sources from Multifrequency Sparse Far Field Patterns	3
An Efficient Model For Scaffold Mediated Bone Regeneration	3
Transport Models for Wave Propagation in Scattering Media with Nonlinear Absorption	3
Appropriate State-Dependent Friction Coefficient Accelerates Kinetic Langevin Dynamics	3
A Continuous Integral Model for White Blood Cell Production	3
Optimal Stochastic Control Problem for a Carbon Emission Reduction Process	3
A Spatiotemporal Model for the Effects of Toxicants on Populations in a Polluted River	3
Inverse Source Problems for the Stochastic Wave Equations: Far-Field Patterns	3
Bayesian Experimental Design for Head Imaging by Electrical Impedance Tomography	3
Modeling Floral and Arthropod Electrostatics Using a Two-Domain AAA-Least Squares Algorithm	3
An Asymptotic Model for Gas-Solid Flow in a Countercurrent Moving Bed Reactor	2
PB-Steric Equations: A General Model of Poisson–Boltzmann Equations	2
A Gaussian Process Model for Insulin Secretion Reconstruction with Uncertainty Quantification: Applications in Cystic Fibrosis	2
Modeling Electrode Heterogeneity in Lithium-Ion Batteries: Unimodal and Bimodal Particle-Size Distributions	2
Paraxial Wave Propagation in Random Media with Long-Range Correlations	2
Mathematical Analysis of a Subsurface Flow Model	2
Infinite Energy Cavitating Solutions: A Variational Approach	2
Stability and Eigenvalue Asymptotics of Multi-Dimensional Fully Magnetic Effected Piezoelectric System with Friction-Type Infinite Memory	2
Discrete Inverse Method for Extracting Disease Transmission Rates from Accessible Infection Data	2
Flow Measurement: An Inverse Problem Formulation	2
An Asymptotic Analysis of Space Charge Layers in a Mathematical Model of a Solid Electrolyte	2
Soil Searching by an Artificial Root	2
Spatial Dynamics with Heterogeneity	2
Dynamics of an LPAA Model for Tribolium Growth: Insights into Population Chaos	2
Why Increase of Heterogeneity Signals Pre-Deterioration During Tumor Progression: A Unified Mathematical Model	2
Standing Waves of Reaction-Diffusion Equations on an Unbounded Graph with Two Vertices	2
Time and Energy Costs for Synchronization of Kuramoto-Oscillator Networks With or Without Noise Perturbation	2

Cover Times of Many Diffusive or Subdiffusive Searchers	2
One-Dimensional Ferronematics in a Channel: Order Reconstruction, Bifurcations, and Multistability	2
Metropolized Forest Recombination for Monte Carlo Sampling of Graph Partitions	2
Existence, Uniqueness, and Numerical Modeling of Wine Fermentation Based on Integro-Differential Equations	2
A Stable Imaging Functional for Anisotropic Periodic Media in Electromagnetic Inverse Scattering	2
The Combinatorial Code and the Graph Rules of Dale Networks	2
Inverse Source Problem for Acoustically-Modulated Electromagnetic Waves	2
The BCC Lattice in a Long-Range Interaction System	2
Stability of a Nonlocal Traffic Flow Model for Connected Vehicles	2
Effective Medium Theory for Embedded Obstacles in Elasticity with Applications to Inverse Problems	2
Optimal Intervention Strategies for Minimizing Total Incidence During an Epidemic	2
Scaling Limit of the Kuramoto Model on Random Geometric Graphs	2
Analyzing and Mimicking the Optimized Flight Physics of Soaring Birds: A Differential Geometric Control and Extremum Seeking System Approach with Real Time Implementation	2
An Axisymmetric Problem for a Patch Loaded Material Surface Attached to the Boundary of an Elastic Semi-space	2
Global Dynamics of Reaction-Diffusion Systems with a Time-Varying Domain	2
General Reconstruction of Elastic Strain Fields from their Longitudinal Ray Transform	2
A New Perfectly Matched Layer Method for the Helmholtz Equation in Nonconvex Domains	2
Twisted TMDs in the Small-Angle Limit: Exponentially Flat and Trivial Bands	2
Diffraction of Acoustic Waves by a Wedge of Point Scatterers	2
Nontrivial Traveling Waves of Phage-Bacteria Models in Different Media Types	2
A Density Description of a Bounded-Confidence Model of Opinion Dynamics on Hypergraphs	2
Power-Engine-Load Form for Dynamic Absolute Concentration Robustness	2
On the Validity of the Tight-Binding Method for Describing Systems of Subwavelength Resonators	2
KP-II Approximation for a Scalar Fermi–Pasta–Ulam System on a 2D Square Lattice	2
Hypernetworks: Cluster Synchronization Is a Higher-Order Effect	2
Derivation and Stability Analysis of a Macroscopic Multilane Model for Traffic Flow	2
Exponential Asymptotics and Higher-Order Stokes Phenomenon in Singularly Perturbed ODEs	2
A Maxwell–Ampère Nernst–Planck Framework for Modeling Charge Dynamics	2
The Beavers--Joseph Interface Boundary Condition is Well Approximated by the Beavers--Joseph--Saffman--Jones Interface Boundary Condition	2
Erratum: Classical and Quantum Random-Walk Centrality Measures in Multilayer Networks	2
Identifying Active Anomalies in a Multilayered Medium by Passive Measurement in EIT	2
Combined Field-Only Boundary Integral Equations for PEC Electromagnetic Scattering Problem in Spherical Geometries	2
The Velocity Field and Birkhoff–Rott Integral for Nondecaying, Nonperiodic Vortex Sheets	2
Density Fluctuations in Stochastic Kinematic Flows	2
A Matrix Basis Formulation for the Dyadic Green’s Functions of Maxwell’s Equations in Layered Media	2
Topological Interface Modes in Systems with Damping	2
On the Dynamics of a Diffusive Foot-and-Mouth Disease Model with Nonlocal Infections	2
Equivalent Formulations of the Oxygen Depletion Problem, Other Implicit Moving Boundary Value Problems, and Implications for Numerical Approximation	2
Spurious Quasi-Resonances in Boundary Integral Equations for the Helmholtz Transmission Problem	2
Diffraction and Interaction of Interfacial Solitons in a Two-Layer Fluid of Great Depth	1
The Impact of High-Frequency-Based Stability on the Onset of Action Potentials in Neuron Models	1
A Modified Landau–de Gennes Theory for Smectic Liquid Crystals: Phase Transitions and Structural Transitions	1
On the Convergence Analysis of One-Shot Inversion Methods	1
The Dynamics of a Collapsing Polyelectrolyte Gel	1
Analysis of a Reaction-Diffusion SIR Epidemic Model with Noncompliant Behavior	1
Piecewise Linear Model of Phytoplankton Wave Propagation in Periodical Vortex Flow	1
Front Propagation and Arrival Times in Networks with Application to Neurodegenerative Diseases	1
Tilt Grain Boundaries of Hexagonal Structures: A Spectral Viewpoint	1
A Novel Approach for Locating Point Sources in a Diffusive Medium	1
Stability of a Capillary Circular Cylinder between Two Parallel Cylinders	1
A Route to the Hydrodynamic Limit of a Reaction-Diffusion Master Equation Using Gradient Structures	1
Infinite-Thin Shock Layer Solutions for Stationary Compressible Conical Flows and Numerical Results via Fourier Spectral Method	1
Estimating the Shannon Entropy and (Un)certainty Relations for Design-Structured POVMs	1
Modeling Immunity to Malaria with an Age-Structured PDE Framework	1
A Novel Algebraic Approach to Time-Reversible Evolutionary Models	1
Global Dynamics of a Filippov SIQR Model with Delayed Relay Control	1
A Bimaterial Plane with a Nano-Sized Flexible Line Inclusion on the Interface	1
Mass Action Systems: Two Criteria for Hopf Bifurcation Without Hurwitz	1
Probabilistic Modeling of Car Traffic Accidents	1
Full Euler Equations for Waves Generated by Vertical Seabed Displacements	1
First Hitting Time of a One-Dimensional Lévy Flight to Small Targets	1
On the Riemann Problem for the Foam Displacement in Porous Media with Linear Adsorption	1
A Two-Dimensional Swarmalator Model with Higher-Order Interactions	1
Radial Amplitude Equations for Fully Localized Planar Patterns	1
The Diffusive Ultrasound-Modulated Bioluminescence Tomography with Partial Data and Uncertain Optical Parameters	1
Finite Population Size Effects on Optimal Communication for Social Foragers	1
Similarity Suppresses Cyclicity: Why Similar Competitors Form Hierarchies	1
Mathematical Analysis of Resonances for an Array of Subwavelength Annular Holes and Its Application in Superresolution Imaging	1
Theoretical Analysis of Rolling Fluid Turbines	1
Nematic Liquid Crystals in a Rectangular Confinement: Solution Landscape, and Bifurcation	1
Circadian Regulation of Electrolyte and Water Transport in the Rat Kidney	1
Two-Dimensional Sloshing: Domains with Interior “High Spots”	1
A Non-Local Kinetic Model for Cell Migration: A Study of the Interplay Between Contact Guidance and Steric Hindrance	1
Analysis on a Spatial SIS Epidemic Model with Saturated Incidence Function in Advective Environments: I. Conserved Total Population	1
Optimal Strategy for Trail Running with Nutrition and Fatigue Factors	1
Generating Customized Field Concentration via Virtual Surface Transmission Resonance	1
Interactions Between Pelagic and Benthic Producers: Asymmetric Competition for Light and Nutrients	1
A Stochastic Version of the Hopfield–Ninio Kinetic Proofreading Model	1
An Optimal Control Problem for the Wigner Equation	1
Two Novel proofs of Spectral Monotonicity of Perturbed Essentially Nonnegative Matrices with Applications in Population Dynamics	1
Random Walks of Swarming on Monotonic Resource Distribution in a Landscape	1
Minnaert Resonances for Bubbles in Soft Elastic Materials	1
Localization of Defects Via Residence Time Measures	1
Jump Conditions for Boussinesq Equations Due to an Abrupt Depth Transition	1
A Quantification of Long Transient Dynamics	1
Impact of Opinion Formation Phenomena in Epidemic Dynamics: Kinetic Modeling on Networks	1
Mechanisms for Producing Oscillatory Plane Waves in Discrete and Continuum Models	1
Neuronal Resilience and Calcium Signaling Pathways in the Context of Synapse Loss and Calcium Leaks: A Computational Modeling Study and Implications for Alzheimer’s Disease	1
Stable Determination of Time-Dependent Collision Kernel in the Nonlinear Boltzmann Equation	1
Reconstruction Formulae for 3D Field-Free Line Magnetic Particle Imaging	1
Electro-Osmotic Flow within Multilayer Microfluidic Structures and an Algebraic Framework for Hydrodynamic Cloaking and Shielding	1
Sensitivity of Steady States in Networks with Application to Markov Chains and Chemical Reaction Networks	1
Joint Impact of Maturation Delay and Fear Effect on the Population Dynamics of a Predator-Prey System	1
A Numerical Scheme and Validation of the Asymptotic Energy Release Rate Formula for a 2D Gel Thin-Film Debonding Problem	1
Bifurcation Analysis of a Stochastic Phytoplankton Growth Model Under Photoinhibition	1