Essays in Biochemistry

Article	Citations
Long non-coding RNAs and splicing	369
So you want to express your protein in Escherichia coli?	107
Mannuronate C-5 epimerases and their use in alginate modification	99
3D bioprinted and integrated platforms for cardiac tissue modeling and drug testing	93
Nanopores: a versatile tool to study protein dynamics	86
3D Bioprinting for fabrication of tissue models of COVID-19 infection	82
Perspectives for the application of Ustilaginaceae as biotech cell factories	73
Ligands and DNA in the allosteric control of retinoid receptors function	73
Laser-based bioprinting for multilayer cell patterning in tissue engineering and cancer research	64
Harnessing the yeast Saccharomyces cerevisiae for the production of fungal secondary metabolites	61
Use of electroconductive biomaterials for engineering tissues by 3D printing and 3D bioprinting	58
Towards bioengineered skeletal muscle: recent developmentsin vitroandin vivo	55
Long non-coding RNAs associated with infection and vaccine-induced immunity	53
Glucocerebrosidase dysfunction in neurodegenerative disease	53
New molecules in plant defence against pathogens	52
Mechanisms of resistance to tyrosine kinase inhibitors in liver cancer stem cells and potential therapeutic approaches	51
Coordinative regulation of ERAD and selective autophagy in plants	47
Unconventional R proteins in the botanical tribe Triticeae	43
Evolution of resistance (R) gene specificity	43
RNA-binding proteins and their role in translational regulation in plants	42
What’s new in protein kinase/phosphatase signalling in the control of plant immunity?	39
Understanding SUMO-mediated adaptive responses in plants to improve crop productivity	39
CRISPR screening in cancer stem cells	38
Astrocyte adaptation in Alzheimer’s disease: a focus on astrocytic P2X7R	37
Phase separation of the microtubule-associated protein tau	37

Evolution of SLiM-mediated hijack functions in intrinsically disordered viral proteins	36
CaMKK2: bridging the gap between Ca2+ signaling and energy-sensing	35
Roles of the oncometabolite enantiomers of 2-hydroxyglutarate and their metabolism by diverse dehydrogenases	35
Catalytic mechanism and kinetics of malate dehydrogenase	35
Does AMPK bind glycogen in skeletal muscle or is the relationship correlative?	33
Genetics of MDH in humans	33
Enzymatic systems for carbohydrate utilization and biosynthesis in Xanthomonas and their role in pathogenesis and tissue specificity	32
A special issue ofEssays in Biochemistryon structural mass spectrometry	31
How viral proteins bind short linear motifs and intrinsically disordered domains	30
Harnessing neutrophil plasticity for HCC immunotherapy	30
Astroglial CB1 receptors, energy metabolism, and gliotransmission: an integrated signaling system?	30
Is the TCA cycle malate dehydrogenase-citrate synthase metabolon an illusion?	29
Modelling single-molecule kinetics of helicase translocation using high-resolution nanopore tweezers (SPRNT)	27
Butyrate-producing colonic clostridia: picky glycan utilization specialists	26
Kinetic modelling of glycolytic oscillations	26
Fungal siderophore metabolism with a focus on Aspergillus fumigatus: impact on biotic interactions and potential translational applications	26
NLR receptor networks in plants	25
Challenges of analysing stochastic gene expression in bacteria using single-cell time-lapse experiments	25
Harnessing adult-plant resistance genes to deploy durable disease resistance in crops	24
Uncovering protein function: from classification to complexes	24
Ubiquitination of the ubiquitin-binding machinery: how early ESCRT components are controlled	24
Plant immunity by damage-associated molecular patterns (DAMPs)	24
Cryo-EM structures of τ filaments from human brain	24
Functional annotation of lncRNA in high-throughput screening	24
Gut bacterial alginate degrading enzymes	24
Astrocyte heterogeneity and interactions with local neural circuits	23
Recombinant protein secretion by Bacillus subtilis and Lactococcus lactis: pathways, applications, and innovation potential	23
Mechanisms of bioleaching: iron and sulfur oxidation by acidophilic microorganisms	23
Salicylic acid and jasmonic acid crosstalk in plant immunity	23
Cross-linking mass spectrometry for mapping protein complex topologies in situ	23
Interplay between phytohormone signalling pathways in plant defence – other than salicylic acid and jasmonic acid	22
Phage-specific antibodies: are they a hurdle for the success of phage therapy?	21
Steroid metabolism and hormonal dynamics in normal and malignant ovaries	21
Saccharomyces cerevisiae strains used industrially for bioethanol production	21
Diverse mycotoxin threats to safe food and feed cereals	21
Correction: Uncovering protein structure	20
Comparative genomics in the search for conserved long noncoding RNAs	20
Sulphotransferase-mediated toxification of chemicals in mouse models: effect of knockout or humanisation of SULT genes	20
Studying chromosome biology with single-molecule resolution in Xenopus laevis egg extracts	20
Engineered bacteria and bacterial derivatives as advanced therapeutics for inflammatory bowel disease	20
Mineralocorticoid receptor actions in cardiovascular development and disease	20
The new age of the phage	20
The evolutionary acquisition and mode of functions of promoter-associated non-coding RNAs (pancRNAs) for mammalian development	19
Rab GTPases in Parkinson's disease: a primer	19
Plant long non-coding RNAs in the regulation of transcription	19
Inflammasome activation in neurodegenerative diseases	18
Towards robust Pseudomonas cell factories to harbour novel biosynthetic pathways	18
Activation and turnover of the plant immune signaling kinase BIK1: a fine balance	18
PINK1 signalling in neurodegenerative disease	17
Can changes in 3D genome architecture create new regulatory landscapes that contribute to phenotypic evolution?	17

Targeting protein kinases in cancer stem cells	17
Evo-devo perspectives on cancer	17
HECT ubiquitin ligases as accessory proteins of the plant proteasome	17
De novo priming: driver of immunotherapy responses or epiphenomenon?	16
Structural mass spectrometry approaches to understand multidrug efflux systems	16
Crossroads between copper ions and amyloid formation in Parkinson’s disease	16
Panoramic view of microRNAs in regulating cancer stem cells	16
Apoplastic and vascular defences	16
Sulfate: a neglected (but potentially highly relevant) anion	16
Unravelling the microscopic characteristics of intrinsically disordered proteins upon liquid–liquid phase separation	16
Electrospray ion beam deposition plus low-energy electron holography as a tool for imaging individual biomolecules	16
Effect of multimodularity and spatial organization of glycoside hydrolases on catalysis	16
Exploring the uncharted territory of the potential protein–protein interactions of cytosolic malate dehydrogenase	15
Understanding biochemistry: basic aspects of statistics for life sciences	15
Computational models as catalysts for investigating redoxin systems	15
Malate dehydrogenase: a story of diverse evolutionary radiation	15
Acetylation, ADP-ribosylation and methylation of malate dehydrogenase	15
DNA sensing in cancer: Pro-tumour and anti-tumour functions of cGAS–STING signalling	15
Understanding metabolic plasticity at single cell resolution	14
NUAK: never underestimate a kinase	14
Characteristics of phage-plasmids and their impact on microbial communities	14
The role of methionine synthases in fungal metabolism and virulence	14
Phage diversity in One Health	14
Principles of synthetic biology	13
Nuclear receptors: from molecular mechanisms to therapeutics	13
Biological soft matter: intrinsically disordered proteins in liquid–liquid phase separation and biomolecular condensates	13
Astrocytes in memory formation and maintenance	13
Tumour-associated macrophages as a potential target to improve natural killer cell-based immunotherapies	13
Knowing me, knowing you: Self and non-self recognition in plant immunity	13
In silicomodelling of the function of disease-related CAZymes	13
Developments in rapid hydrogen–deuterium exchange methods	13
Estrogen receptor actions in colitis	13
Advances in metabolic engineering of Corynebacterium glutamicum to produce high-value active ingredients for food, feed, human health, and well-being	13
The non-coding genome in genetic brain disorders: new targets for therapy?	12
Perspective on pros and cons of microlearning in health education	12
Non-coding RNA in cancer	12
How phosphorylation impacts intrinsically disordered proteins and their function	11
Mass spectrometric insights into protein aggregation	11
Carbohydrate esterases involved in deacetylation of food components by the human gut microbiota	11
Surface-sampling mass spectrometry to study proteins and protein complexes	11
Perivascular tumor-associated macrophages and their role in cancer progression	11
The biophysics of disordered proteins from the point of view of single-molecule fluorescence spectroscopy	11
N-glycan breakdown by bacterial CAZymes	11
Oxysterol sulfates in fluids, cells and tissues: how much do we know about their clinical significance, biological relevance and biophysical implications?	11
Branched-chain amino acid biosynthesis in fungi	11
A special issue of Essays in Biochemistry on evolutionary developmental biology	11
Microbial xylanolytic carbohydrate esterases	11
O-Mucin-degrading carbohydrate-active enzymes and their possible implication in inflammatory bowel diseases	11
Understanding and computational design of genetic circuits of metabolic networks	11
AMPK and O-GlcNAcylation: interplay in cardiac pathologies and heart failure	11
Uncovering malate dehydrogenase: structure, function and role in disease	10
Physiology of malate dehydrogenase and how dysregulation leads to disease	10
Insights into the regulation of malate dehydrogenase: inhibitors, activators, and allosteric modulation by small molecules	10
A special issue of Essays in Biochemistry on AMPK and AMPK-related kinases	10
ATP-binding cassette transporters and neurodegenerative diseases	10
Analytical methods for quantitating sulfate in plasma and serum	10
Steroid sulfatase and sulfotransferases in the estrogen and androgen action of gynecological cancers: current status and perspectives	10
Introduction to bioprinting of in vitro cancer models	10
RNA:DNA triple helices: from peculiar structures to pervasive chromatin regulators	10
Malate dehydrogenase (MDH) in cancer: a promiscuous enzyme, a redox regulator, and a metabolic co-conspirator	10
Polysaccharide sulfotransferases: the identification of putative sequences and respective functional characterisation	10
How mass spectrometry can be exploited to study AMPK	10
Innovate and empower: the malate dehydrogenase course-based undergraduate research experiences and community of practice	10
Steroid receptor-coregulator transcriptional complexes: new insights from CryoEM	10
Retromer dependent changes in cellular homeostasis and Parkinson's disease	9
Uptake of formative feedback: perspective from a transnational education cohort	9
Harnessing the ubiquitin code to respond to environmental cues	9
The chameleonic behavior of p53 in health and disease: the transition from a client to an aberrant condensate scaffold in cancer	9
IDH mutation and cancer stem cell	9
Case study: Co-creating a flipped feed-in approach to a virtual biochemistry lab assessment: increasing student achievement and engagement in a large, diverse cohort	9
Controlling amyloid formation of intrinsically disordered proteins and peptides: slowing down or speeding up?	9
Plant peroxisome proteostasis—establishing, renovating, and dismantling the peroxisomal proteome	9
A special issue of Essays in Biochemistry on current educational developments in molecular bioscience	9
Ubiquitin ligases at the nexus of plant responses to biotic and abiotic stresses	9
A special issue of Essays in Biochemistry on cancer stem cells	9
On the impact of carbohydrate-binding modules (CBMs) in lytic polysaccharide monooxygenases (LPMOs)	8
Integrating single-molecule FRET and biomolecular simulations to study diverse interactions between nucleic acids and proteins	8
Fundamentals of HDX-MS	8
WNT signaling and cancer stemness	8
The cGAS-STING pathway in cancer immunity: dual roles, therapeutic strategies, and clinical challenges	8

Acinetobacter baylyi ADP1—naturally competent for synthetic biology	8
Concerted actions of PRR- and NLR-mediated immunity	8
T-cell response to checkpoint blockade immunotherapies: from fundamental mechanisms to treatment signatures	8
Hydrogen/deuterium exchange-mass spectrometry of integral membrane proteins in native-like environments: current scenario and the way forward	8
Glycosyltransferase family 47 (GT47) proteins in plants and animals	8
Charge detection mass spectrometry for the analysis of viruses and virus-like particles	8
Circular RNAs as microRNA sponges: evidence and controversies	8
Mammalian lipids: structure, synthesis and function	8