OOIR: Observatory of International Research

Papers

(The TQCC of Bulletin of Mathematical Biology is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-08-01 to 2025-08-01.)

Article	Citations
Special Tributes	43
From Policy to Prediction: Forecasting COVID-19 Dynamics Under Imperfect Vaccination	35
Measles Infection Dose Responses: Insights from Mathematical Modeling	28
Effect of Population Partitioning on the Probability of Silent Circulation of Poliovirus	26
Statistical Mobility of Multicellular Colonies of Flagellated Swimming Cells	26
Modeling and Evaluation of the Joint Prevention and Control Mechanism for Curbing COVID-19 in Wuhan	25
A Data-Informed Mathematical Model of Microglial Cell Dynamics During Ischemic Stroke in the Middle Cerebral Artery	24
Noise-Driven Transitions in Collective Foraging of Ant Colonies	22
Modelling Radiation Cancer Treatment with a Death-Rate Term in Ordinary and Fractional Differential Equations	21
Range Shifts Under Constant-Speed and Accelerated Climate Warming	18
A SIMPL Model of Phage-Bacteria Interactions Accounting for Mutation and Competition	17
A Mathematical Study of the Role of tBregs in Breast Cancer	17
Assessing the Role of Patient Generation Techniques in Virtual Clinical Trial Outcomes	16
Theoretical Study of Retinoblastoma in the Hereditary and Non-hereditary Processes Including the Cancer Growth	16
Mathematical Models of Early Hepatitis B Virus Dynamics in Humanized Mice	16
Computational Model of the Effect of Mitochondrial Dysfunction on Excitation–Contraction Coupling in Skeletal Muscle	16
A Hypothesis-Free Bridging of Disease Dynamics and Non-pharmaceutical Policies	15
Autopolyploidy, Allopolyploidy, and Phylogenetic Networks with Horizontal Arcs	15
Transition Therapy: Tackling the Ecology of Tumor Phenotypic Plasticity	15
Modeling the Development of Cellular Exhaustion and Tumor-Immune Stalemate	15
A Framework for Parameter Estimation and Uncertainty Quantification in Systems Biology Using Quantile Regression and Physics-Informed Neural Networks	15
Orchard Networks are Trees with Additional Horizontal Arcs	15
0–1 Laws for Pattern Occurrences in Phylogenetic Trees and Networks	14
Host Diversification May Split Epidemic Spread into Two Successive Fronts Advancing at Different Speeds	14
Maximum Likelihood Estimation for Unrooted 3-Leaf Trees: An Analytic Solution for the CFN Model	14

Parameter Estimation and Identifiability in Kinetic Flux Profiling Models of Metabolism	14
A Computational Framework for the Administration of 5-Aminovulinic Acid Before Glioblastoma Surgery	14
Bifurcation Analysis of a Heat-Sensitive Epigenetic Regulatory Network	13
Testing and Isolation Efficacy: Insights from a Simple Epidemic Model	13
The Effect of Harvesting Adults on the Evolution of Reproduction Age Via Density-Dependent Juvenile Mortality	13
Evolutionary Invasion Analysis of Modern Epidemics Highlights the Context-Dependence of Virulence Evolution	13
Pretty Darn Good Control: When are Approximate Solutions Better than Approximate Models	13
A Mean-Field Approximation of SIR Epidemics on an Erdös–Rényi Network Model	12
$$R_0$$ May Not Tell Us Everything: Transient Disease Dynamics of Some SIR Models Over Patchy Environments	12
Enumeration of Rooted Binary Unlabeled Galled Trees	12
Macrophage Anti-inflammatory Behaviour in a Multiphase Model of Atherosclerotic Plaque Development	12
Modelling Mucus Clearance in Sinuses: Thin-Film Flow Inside a Fluid-Producing Cavity Lined with an Active Surface	12
Effects of Heterogeneity on Cancer: A Game Theory Perspective	12
Mathematical Modelling Highlights the Potential for Genetic Manipulation as an Adjuvant to Counter Efflux-Mediated MDR in Salmonella	12
Modelling the Impact of HIF on Metabolism and the Extracellular Matrix: Consequences for Tumour Growth and Invasion	12
Differentiating Contact with Symptomatic and Asymptomatic Infectious Individuals in a SEIR Epidemic Model	11
A Kinetic Finite Volume Discretization of the Multidimensional PIDE Model for Gene Regulatory Networks	11
Designing Drug Regimens that Mitigate Nonadherence	11
Characterizing Long Transients in Consumer–Resource Systems With Group Defense and Discrete Reproductive Pulses	11
A Continuation Technique for Maximum Likelihood Estimators in Biological Models	11
Local Overfishing Patterns Have Regional Effects on Health of Coral, and Economic Transitions Can Promote Its Recovery	11
Make the Most of Your Society Journal	11
A Spatial Kinetic Model of Crowd Evacuation Dynamics with Infectious Disease Contagion	11
Statistical Analysis of Two-Compartment Pharmacokinetic Models with Drug Non-adherence	11
Exploring the Evolution of Altruistic Punishment with a PDE Model of Cultural Multilevel Selection	10
Transmission of Multiple Pathogens Across Species	10
Multi-layer Bundling as a New Approach for Determining Multi-scale Correlations Within a High-Dimensional Dataset	10
Fungal Parasite Transmission in a Planktonic Ecosystem Under Light and Nutrient Constraints	10
Convex Representation of Metabolic Networks with Michaelis–Menten Kinetics	10
Towards Building a Sustainable Future: Positioning Ecological Modelling for Impact in Ecosystems Management	10
p53 Orchestrates Cancer Metabolism: Unveiling Strategies to Reverse the Warburg Effect	10
Speed and Shape of Population Fronts with Density-Dependent Diffusion	10
On Modeling Ovarian Aging and Menopause Timing	10
Bounding the Softwired Parsimony Score of a Phylogenetic Network	10
Ecological Effects of Predator Harvesting and Environmental Noises on Oceanic Coral Reefs	10
Spreading Properties for SIR Models on Homogeneous Trees	10
A Comparison of the “Reduced Losses” and “Increased Production” Models for Mussel Bed Dynamics	10
Fixed and Distributed Gene Expression Time Delays in Reaction–Diffusion Systems	10
Pathophysiological Mechanisms of the Onset, Development, and Disappearance Phases of Skin Eruptions in Chronic Spontaneous Urticaria	10
Effect of Human Behavior on the Evolution of Viral Strains During an Epidemic	10
A Comparison of Deterministic and Stochastic Plant-Vector-Virus Models Based on Probability of Disease Extinction and Outbreak	10
Spaces of Phylogenetic Diversity Indices: Combinatorial and Geometric Properties	10
Relaxation and Noise-Driven Oscillations in a Model of Mitotic Spindle Dynamics	10
Modelling Oscillatory Patterns in the Bovine Estrous Cycle with Boolean Delay Equations	10
Integration of Immune Cell-Target Cell Conjugate Dynamics Changes the Time Scale of Immune Control of Cancer	10
Revisiting Fishery Sustainability Targets	10
Learning Biological Dynamics From Spatio-Temporal Data by Gaussian Processes	9
Optimality of Maximal-Effort Vaccination	9
Labellable Phylogenetic Networks	9
A 3D Computational Study on the Formation and Progression of Tumor Cells in Diffuse Gastric Cancer	9

Correction to: Computational Model of the Effect of Mitochondrial Dysfunction on Excitation–Contraction Coupling in Skeletal Muscle	9
Back to the Roots: A Discrete Kermack–McKendrick Model Adapted to Covid-19	9
Derivation and Analysis of a Discrete Predator–Prey Model	9
A Data-Validated Stoichiometric Model for the Priming Effect	9
The Impact of Quarantine and Medical Resources on the Control of COVID-19 in Wuhan based on a Household Model	9
Multiscale Asymptotic Analysis Reveals How Cell Growth and Subcellular Compartments Affect Tissue-Scale Hormone Transport	8
Mathematical Assessment of the Role of Intervention Programs for Malaria Control	8
Bounding Seed Loss from Isolated Habitat Patches	8
The Evolution of the Age of Onset of Resistance to Infectious Disease	8
Modeling Syphilis and HIV Coinfection: A Case Study in the USA	8
COVID-19 Vaccination and Healthcare Demand	8
Prevalence Estimation Methods for Time-Dependent Antibody Kinetics of Infected and Vaccinated Individuals: A Markov Chain Approach	8
A Countable-Type Branching Process Model for the Tug-of-War Cancer Cell Dynamics	8
A Risk-Structured Model of the Influence of Mental Health on Opioid Addiction	8
Analysis of War and Conflict Effect on the Transmission Dynamics of the Tenth Ebola Outbreak in the Democratic Republic of Congo	8
Nonlinear Regression Modelling: A Primer with Applications and Caveats	8
Targeting Cellular DNA Damage Responses in Cancer: An In Vitro-Calibrated Agent-Based Model Simulating Monolayer and Spheroid Treatment Responses to ATR-Inhibiting Drugs	8
Infectious Disease in the Workplace: Quantifying Uncertainty in Transmission	8
Inference of Pairwise Interactions from Strain Frequency Data Across Settings and Context-Dependent Mutual Invasibilities	7
Linking Spontaneous Behavioral Changes to Disease Transmission Dynamics: Behavior Change Includes Periodic Oscillation	7
Oscillations in a Spatial Oncolytic Virus Model	7
Optimization Therapy by Coupling Intermittent Androgen Suppression with Impulsive Chemotherapy for a Prostate Cancer Model	7
Modelling Immune Memory Development	7
Analysis of a COVID-19 Epidemic Model with Seasonality	7
Mathematical Modeling and Analysis of CD200–CD200R in Cancer Treatment	7
Correction to: Mathematical Modelling of Alternative Pathway of Complement System	7
Impacts of Tempo and Mode of Environmental Fluctuations on Population Growth: Slow- and Fast-Limit Approximations of Lyapunov Exponents for Periodic and Random Environments	7
Tissue Oxygenation Around Capillaries: Effects of Hematocrit and Arteriole Oxygen Condition	7
NIAID/SMB Workshop on Multiscale Modeling of Infectious and Immune-Mediated Diseases	7
Stochastic Modeling of In Vitro Bactericidal Potency	7
Towards Inferring Network Properties from Epidemic Data	7
Dynamics of Stoichiometric Autotroph–Mixotroph–Bacteria Interactions in the Epilimnion	6
Performance Study of Two Serial Interconnected Chemostats with Mortality	6
Bayesian Inference of Phylogenetic Distances: Revisiting the Eigenvalue Approach	6
Bifurcation and Pattern Formation in an Activator–Inhibitor Model with Non-local Dispersal	6
A Model for the Coexistence of Competing Mechanisms for $$\text {Ca}^{\text {2}+}$$ Oscillations in T-lymphocytes	6
Asymptotic Analysis of Optimal Vaccination Policies	6
A Stochastic Model of Cortical Microtubule Anchoring and Mechanics Provides Regulatory Control of Microtubule Shape	6
Targeting CD4+ T cell Exhaustion to Improve Future Immunotherapy Strategies	6
Designing Weights for Quartet-Based Methods When Data are Heterogeneous Across Lineages	6
Connecting Agent-Based Models with High-Dimensional Parameter Spaces to Multidimensional Data Using SMoRe ParS: A Surrogate Modeling Approach	6
Analysing the Effect of Test-and-Trace Strategy in an SIR Epidemic Model	6
Dynamical Differences in Respiratory Syncytial Virus	6
Source-Sink Dynamics in a Two-Patch SI Epidemic Model with Life Stages and No Recovery from Infection	6
A New Method for Low Density Distribution Modeling and Near Threatened Species: The Study Case of Plectrohyla Guatemalensis	6
Spatial Segregation Across Travelling Fronts in Individual-Based and Continuum Models for the Growth of Heterogeneous Cell Populations	6
Transmission Dynamics of Tuberculosis with Age-specific Disease Progression	6
Vaccination and Quarantine Effect on COVID-19 Transmission Dynamics Incorporating Chinese-Spring-Festival Travel Rush: Modeling and Simulations	6
Making Predictions Using Poorly Identified Mathematical Models	6
Invasiveness of a Growth-Migration System in a Two-dimensional Percolation cluster: A Stochastic Mathematical Approach	6
Predicting the Behavior of Sparsely-Sampled Systems Across Neurobiology and Epidemiology	6
Evolving Improved Sampling Protocols for Dose–Response Modelling Using Genetic Algorithms with a Profile-Likelihood Metric	6
The Effect of Antibodies in the Presence of Syncytia During Viral Infections	6
Intermittent Hormone Therapy Models Analysis and Bayesian Model Comparison for Prostate Cancer	6
Whole-Colony Dynamic Energy Budget Model for Bumble Bees: Assessing the Impact of Wildflower Patches on Crop Pollination	6
Harnessing Flex Point Symmetry to Estimate Logistic Tumor Population Growth	6
A Refunding Scheme to Incentivize Narrow-Spectrum Antibiotic Development	5
Correction to: Combining Mechanisms of Growth Arrest in Solid Tumours: A Mathematical Investigation	5
Relation Between the Number of Peaks and the Number of Reciprocal Sign Epistatic Interactions	5
Mechanical Torque Promotes Bipolarity of the Mitotic Spindle Through Multi-centrosomal Clustering	5
Comparison Theorems for Stochastic Chemical Reaction Networks	5
Simulation of Angiogenesis in Three Dimensions: Development of the Retinal Circulation	5
Stochastic Reaction Networks Within Interacting Compartments	5
Quantitative Assessment of a Dual Epidemic Caused by Tuberculosis and HIV in the Philippines	5
The Impact of Host Abundance on the Epidemiology of Tick-Borne Infection	5
Parameter Optimization for a Neurotransmission Recovery Model	5
Cost Optimisation of Individual-Based Institutional Reward Incentives for Promoting Cooperation in Finite Populations	5
A Nonlinear Delay Model for Metabolic Oscillations in Yeast Cells	5
Boolean Models of the Transport, Synthesis, and Metabolism of Tryptophan in Escherichia coli	5
Dimensions of Level-1 Group-Based Phylogenetic Networks	5
VisualPDE: Rapid Interactive Simulations of Partial Differential Equations	5
A Multiscale Model of COVID-19 Dynamics	5
Effect of Movement on the Early Phase of an Epidemic	5
Circulation of Respiratory Viruses in the City: Towards an Agent-Based Ecosystem model	5
Mathematical Modeling of Mating Probability and Fertile Egg Production in Helminth Parasites	5