OOIR: Observatory of International Research

Papers

(The TQCC of Bulletin of Mathematical Biology is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-09-01 to 2025-09-01.)

Article	Citations
Special Tributes	43
From Policy to Prediction: Forecasting COVID-19 Dynamics Under Imperfect Vaccination	37
Measles Infection Dose Responses: Insights from Mathematical Modeling	29
Effect of Population Partitioning on the Probability of Silent Circulation of Poliovirus	27
Assessing the Role of Patient Generation Techniques in Virtual Clinical Trial Outcomes	26
A Data-Informed Mathematical Model of Microglial Cell Dynamics During Ischemic Stroke in the Middle Cerebral Artery	26
Modeling and Evaluation of the Joint Prevention and Control Mechanism for Curbing COVID-19 in Wuhan	26
Computational Model of the Effect of Mitochondrial Dysfunction on Excitation–Contraction Coupling in Skeletal Muscle	24
A SIMPL Model of Phage-Bacteria Interactions Accounting for Mutation and Competition	21
Theoretical Study of Retinoblastoma in the Hereditary and Non-hereditary Processes Including the Cancer Growth	18
Range Shifts Under Constant-Speed and Accelerated Climate Warming	18
Noise-Driven Transitions in Collective Foraging of Ant Colonies	18
A Mathematical Study of the Role of tBregs in Breast Cancer	18
When are Quarnets Sufficient to Reconstruct Semi-directed Phylogenetic Networks?	17
Modelling Radiation Cancer Treatment with a Death-Rate Term in Ordinary and Fractional Differential Equations	17
Statistical Mobility of Multicellular Colonies of Flagellated Swimming Cells	17
A Computational Framework for the Administration of 5-Aminovulinic Acid Before Glioblastoma Surgery	16
Autopolyploidy, Allopolyploidy, and Phylogenetic Networks with Horizontal Arcs	16
A Framework for Parameter Estimation and Uncertainty Quantification in Systems Biology Using Quantile Regression and Physics-Informed Neural Networks	16
Mathematical Models of Early Hepatitis B Virus Dynamics in Humanized Mice	16
A Hypothesis-Free Bridging of Disease Dynamics and Non-pharmaceutical Policies	16
Maximum Likelihood Estimation for Unrooted 3-Leaf Trees: An Analytic Solution for the CFN Model	15
Host Diversification May Split Epidemic Spread into Two Successive Fronts Advancing at Different Speeds	15
Transition Therapy: Tackling the Ecology of Tumor Phenotypic Plasticity	15
Parameter Estimation and Identifiability in Kinetic Flux Profiling Models of Metabolism	14

0–1 Laws for Pattern Occurrences in Phylogenetic Trees and Networks	14
The Effect of Harvesting Adults on the Evolution of Reproduction Age Via Density-Dependent Juvenile Mortality	14
Effects of Heterogeneity on Cancer: A Game Theory Perspective	14
Bifurcation Analysis of a Heat-Sensitive Epigenetic Regulatory Network	13
Testing and Isolation Efficacy: Insights from a Simple Epidemic Model	13
Macrophage Anti-inflammatory Behaviour in a Multiphase Model of Atherosclerotic Plaque Development	13
Pretty Darn Good Control: When are Approximate Solutions Better than Approximate Models	13
A Mean-Field Approximation of SIR Epidemics on an Erdös–Rényi Network Model	13
Mathematical Modelling Highlights the Potential for Genetic Manipulation as an Adjuvant to Counter Efflux-Mediated MDR in Salmonella	13
Evolutionary Invasion Analysis of Modern Epidemics Highlights the Context-Dependence of Virulence Evolution	13
Orchard Networks are Trees with Additional Horizontal Arcs	13
Make the Most of Your Society Journal	12
Modelling the Impact of HIF on Metabolism and the Extracellular Matrix: Consequences for Tumour Growth and Invasion	12
Characterizing Long Transients in Consumer–Resource Systems With Group Defense and Discrete Reproductive Pulses	12
Modelling Mucus Clearance in Sinuses: Thin-Film Flow Inside a Fluid-Producing Cavity Lined with an Active Surface	12
Enumeration of Rooted Binary Unlabeled Galled Trees	12
Modeling the Development of Cellular Exhaustion and Tumor-Immune Stalemate	12
Pattern Formation Driven by Nonlocal Perception in a Delayed Pine Wilt Disease Model with Top-Hat Kernel	11
Fixed and Distributed Gene Expression Time Delays in Reaction–Diffusion Systems	11
A Kinetic Finite Volume Discretization of the Multidimensional PIDE Model for Gene Regulatory Networks	11
Exploring the Evolution of Altruistic Punishment with a PDE Model of Cultural Multilevel Selection	11
Effect of Human Behavior on the Evolution of Viral Strains During an Epidemic	11
Mathematical Modelling and Uncertainty Quantification for Analysis of Biphasic Coral Reef Recovery Patterns	11
Transmission of Multiple Pathogens Across Species	11
A Spatial Kinetic Model of Crowd Evacuation Dynamics with Infectious Disease Contagion	11
Statistical Analysis of Two-Compartment Pharmacokinetic Models with Drug Non-adherence	11
p53 Orchestrates Cancer Metabolism: Unveiling Strategies to Reverse the Warburg Effect	11
$$R_0$$ May Not Tell Us Everything: Transient Disease Dynamics of Some SIR Models Over Patchy Environments	11
Designing Drug Regimens that Mitigate Nonadherence	11
A Comparison of Deterministic and Stochastic Plant-Vector-Virus Models Based on Probability of Disease Extinction and Outbreak	11
Pathophysiological Mechanisms of the Onset, Development, and Disappearance Phases of Skin Eruptions in Chronic Spontaneous Urticaria	11
On Modeling Ovarian Aging and Menopause Timing	10
Revisiting Fishery Sustainability Targets	10
Spreading Properties for SIR Models on Homogeneous Trees	10
Modelling Oscillatory Patterns in the Bovine Estrous Cycle with Boolean Delay Equations	10
Accidental and Regulated Cell Death in Yeast Colony Biofilms	10
Local Overfishing Patterns Have Regional Effects on Health of Coral, and Economic Transitions Can Promote Its Recovery	10
Bounding the Softwired Parsimony Score of a Phylogenetic Network	10
A Continuation Technique for Maximum Likelihood Estimators in Biological Models	10
Convex Representation of Metabolic Networks with Michaelis–Menten Kinetics	10
Fungal Parasite Transmission in a Planktonic Ecosystem Under Light and Nutrient Constraints	10
Multi-layer Bundling as a New Approach for Determining Multi-scale Correlations Within a High-Dimensional Dataset	10
Differentiating Contact with Symptomatic and Asymptomatic Infectious Individuals in a SEIR Epidemic Model	10
Speed and Shape of Population Fronts with Density-Dependent Diffusion	10
Relaxation and Noise-Driven Oscillations in a Model of Mitotic Spindle Dynamics	10
Towards Building a Sustainable Future: Positioning Ecological Modelling for Impact in Ecosystems Management	10
Spaces of Phylogenetic Diversity Indices: Combinatorial and Geometric Properties	10
Optimality of Maximal-Effort Vaccination	9
Prevalence Estimation Methods for Time-Dependent Antibody Kinetics of Infected and Vaccinated Individuals: A Markov Chain Approach	9
Ecological Effects of Predator Harvesting and Environmental Noises on Oceanic Coral Reefs	9

Correction to: Computational Model of the Effect of Mitochondrial Dysfunction on Excitation–Contraction Coupling in Skeletal Muscle	9
Back to the Roots: A Discrete Kermack–McKendrick Model Adapted to Covid-19	9
A Data-Validated Stoichiometric Model for the Priming Effect	9
Integration of Immune Cell-Target Cell Conjugate Dynamics Changes the Time Scale of Immune Control of Cancer	9
Enhancing pedagogical practices with Artificial Neural Networks in the age of AI to engage the next generation in Biomathematics	9
The Impact of Quarantine and Medical Resources on the Control of COVID-19 in Wuhan based on a Household Model	9
Derivation and Analysis of a Discrete Predator–Prey Model	9
A 3D Computational Study on the Formation and Progression of Tumor Cells in Diffuse Gastric Cancer	9
Multiscale Asymptotic Analysis Reveals How Cell Growth and Subcellular Compartments Affect Tissue-Scale Hormone Transport	8
Analysis of War and Conflict Effect on the Transmission Dynamics of the Tenth Ebola Outbreak in the Democratic Republic of Congo	8
Nonlinear Regression Modelling: A Primer with Applications and Caveats	8
Learning Biological Dynamics From Spatio-Temporal Data by Gaussian Processes	8
Modeling Syphilis and HIV Coinfection: A Case Study in the USA	8
Labellable Phylogenetic Networks	8
The Evolution of the Age of Onset of Resistance to Infectious Disease	8
A Risk-Structured Model of the Influence of Mental Health on Opioid Addiction	8
COVID-19 Vaccination and Healthcare Demand	8
Modelling the Impact of Phenotypic Heterogeneity on Cell Migration: A Continuum Framework Derived from Individual-Based Principles	7
A Countable-Type Branching Process Model for the Tug-of-War Cancer Cell Dynamics	7
NIAID/SMB Workshop on Multiscale Modeling of Infectious and Immune-Mediated Diseases	7
Mathematical Modeling and Analysis of CD200–CD200R in Cancer Treatment	7
Optimization Therapy by Coupling Intermittent Androgen Suppression with Impulsive Chemotherapy for a Prostate Cancer Model	7
Mathematical Assessment of the Role of Intervention Programs for Malaria Control	7
Modelling Immune Memory Development	7
Linking Spontaneous Behavioral Changes to Disease Transmission Dynamics: Behavior Change Includes Periodic Oscillation	7
Oscillations in a Spatial Oncolytic Virus Model	7
Tissue Oxygenation Around Capillaries: Effects of Hematocrit and Arteriole Oxygen Condition	7
Bounding Seed Loss from Isolated Habitat Patches	7
Inference of Pairwise Interactions from Strain Frequency Data Across Settings and Context-Dependent Mutual Invasibilities	7
Towards Inferring Network Properties from Epidemic Data	7
Infectious Disease in the Workplace: Quantifying Uncertainty in Transmission	7
Analysing the Effect of Test-and-Trace Strategy in an SIR Epidemic Model	6
Performance Study of Two Serial Interconnected Chemostats with Mortality	6
Analysis of a COVID-19 Epidemic Model with Seasonality	6
Correction to: Mathematical Modelling of Alternative Pathway of Complement System	6
Stochastic Modeling of In Vitro Bactericidal Potency	6
Source-Sink Dynamics in a Two-Patch SI Epidemic Model with Life Stages and No Recovery from Infection	6
Intermittent Hormone Therapy Models Analysis and Bayesian Model Comparison for Prostate Cancer	6
Whole-Colony Dynamic Energy Budget Model for Bumble Bees: Assessing the Impact of Wildflower Patches on Crop Pollination	6
Targeting CD4+ T cell Exhaustion to Improve Future Immunotherapy Strategies	6
Transmission Dynamics of Tuberculosis with Age-specific Disease Progression	6
Bayesian Inference of Phylogenetic Distances: Revisiting the Eigenvalue Approach	6
Dynamical Differences in Respiratory Syncytial Virus	6
Dynamics of Stoichiometric Autotroph–Mixotroph–Bacteria Interactions in the Epilimnion	6
Impacts of Tempo and Mode of Environmental Fluctuations on Population Growth: Slow- and Fast-Limit Approximations of Lyapunov Exponents for Periodic and Random Environments	6
Modeling the effects of a Shock-and-Kill Treatment for HIV: Latency-Reversing Agents and Natural Killer Cells	6
Designing Weights for Quartet-Based Methods When Data are Heterogeneous Across Lineages	6
Relation Between the Number of Peaks and the Number of Reciprocal Sign Epistatic Interactions	6
Asymptotic Analysis of Optimal Vaccination Policies	6
A Model for the Coexistence of Competing Mechanisms for $$\text {Ca}^{\text {2}+}$$ Oscillations in T-lymphocytes	6
Bifurcation and Pattern Formation in an Activator–Inhibitor Model with Non-local Dispersal	6
Connecting Agent-Based Models with High-Dimensional Parameter Spaces to Multidimensional Data Using SMoRe ParS: A Surrogate Modeling Approach	6
Predicting the Behavior of Sparsely-Sampled Systems Across Neurobiology and Epidemiology	6
Invasiveness of a Growth-Migration System in a Two-dimensional Percolation cluster: A Stochastic Mathematical Approach	6
Making Predictions Using Poorly Identified Mathematical Models	6
Comparison Theorems for Stochastic Chemical Reaction Networks	6
Effect of Movement on the Early Phase of an Epidemic	6
The Effect of Antibodies in the Presence of Syncytia During Viral Infections	6
Harnessing Flex Point Symmetry to Estimate Logistic Tumor Population Growth	6
A New Method for Low Density Distribution Modeling and Near Threatened Species: The Study Case of Plectrohyla Guatemalensis	6
A Nonlinear Delay Model for Metabolic Oscillations in Yeast Cells	5
The Impact of Host Abundance on the Epidemiology of Tick-Borne Infection	5
VisualPDE: Rapid Interactive Simulations of Partial Differential Equations	5
A Multiscale Model of COVID-19 Dynamics	5
Correction to: Combining Mechanisms of Growth Arrest in Solid Tumours: A Mathematical Investigation	5
Evolving Improved Sampling Protocols for Dose–Response Modelling Using Genetic Algorithms with a Profile-Likelihood Metric	5
Mechanical Torque Promotes Bipolarity of the Mitotic Spindle Through Multi-centrosomal Clustering	5
A Stochastic Model of Cortical Microtubule Anchoring and Mechanics Provides Regulatory Control of Microtubule Shape	5
Vaccination and Quarantine Effect on COVID-19 Transmission Dynamics Incorporating Chinese-Spring-Festival Travel Rush: Modeling and Simulations	5
Spatial Segregation Across Travelling Fronts in Individual-Based and Continuum Models for the Growth of Heterogeneous Cell Populations	5
Simulation of Angiogenesis in Three Dimensions: Development of the Retinal Circulation	5
Cost Optimisation of Individual-Based Institutional Reward Incentives for Promoting Cooperation in Finite Populations	5
Parameter Optimization for a Neurotransmission Recovery Model	5
Practical Identifiability in a Viscoelastic Respiratory Model for Mechanical Ventilation	5
Circulation of Respiratory Viruses in the City: Towards an Agent-Based Ecosystem model	5