OOIR: Observatory of International Research

Papers

(The TQCC of European Biophysics Journal With Biophysics Letters is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-06-01 to 2025-06-01.)

Article	Citations
Biophysical characterization of the DNA binding motif of human phospholipid scramblase 1	76
Structure of a novel form of phosphopantetheine adenylyltransferase from Klebsiella pneumoniae at 2.59 Å resolution	27
Long-term memory in Staphylococcus aureus α-hemolysin ion channel kinetics	27
Mechanistic insights of neuronal calcium and IP3 signaling system regulating ATP release during ischemia in progression of Alzheimer’s disease	25
Real-time tilting and twisting motions of ligand-bound states of α7 nicotinic acetylcholine receptor	22
Use of cesium chloride density gradient ultracentrifugation for the purification and characterization of recombinant adeno-associated virus	19
DNA–MBF1 study using molecular dynamics simulations	19
A gene-encoded bioprotein second harmonic generation (SHG) probe from Autographa californica nuclear polyhedrosis virus (AcMNPV) polyhedrin for live cell imaging	19
Choosing the right density for a concentrated protein system like gluten in a coarse-grained model	17
Self-assembly of smooth muscle myosin filaments: adaptation of filament length by telokin and Mg·ATP	16
‘Chain and running’ induced by mechanical interactions among cells of different phenotypes in the Bacillus subtilis biofilm	16
Modeling study of kinesin-13 MCAK microtubule depolymerase	16
Numerical solution of compartment-based reaction/diffusion models with DABOSS algorithm	14
Thermodynamics of semi-specific ligand recognition: the binding of dipeptides to the E.coli dipeptide binding protein DppA	13
Pulling short DNA with mismatch base pairs	13
SViMULATE: a computer program facilitating interactive, multi-mode simulation of analytical ultracentrifugation data	12
Analysis of residue–residue interactions in the structures of ASIC1a suggests possible gating mechanisms	11
Computational discovery of dual potential inhibitors of SARS‐CoV‐2 spike/ACE2 and Mpro: 3D-pharmacophore, docking-based virtual screening, quantum mechanics and molecular dynamics	10
Interactive multiple binding of oleic acid, warfarin and ibuprofen with human serum albumin revealed by thermal and fluorescence studies	10
Analysis of proteins in the light of mutations	10
Molecular transport through nano-sized multipores of lipid vesicles: a COMSOL simulation study	9
The effects of lithium on human red blood cells studied using optical spectroscopy and laser trap	9
14th EBSA congress, July 31 – August 4, 2023, Stockholm, Sweden – Abstracts	9
Mechanical anisotropy of hair affected by genetic diseases highlights structural information related to differential crosslinking in keratins	9
The effect of ionic redistributions on the microwave dielectric response of cytosol water upon glucose uptake	8

Experimental extraction of Young’s modulus of MCF-7 tissue using atomic force microscopy and the spherical contact models	8
Time-dependent simulation of blood flow through an abdominal aorta with iliac arteries	8
Diversity of hydrodynamic radii of intrinsically disordered proteins	8
KD determination from time-resolved experiments on live cells with LigandTracer and reconciliation with end-point flow cytometry measurements	8
Rational design of stapled helical peptides as antidiabetic PPARγ antagonists to target coactivator site by decreasing unfavorable entropy penalty instead of increasing favorable enthalpy contribution	7
DNA binding to small anionic ligands: the case of Orange G dye	7
Structure and dynamics of pteridine reductase 1: the key phenomena relevant to enzyme function and drug design	7
Relation between flexibility and intrinsically disorder regions in thermosensitive TRP channels reveal allosteric effects	7
The cross-correlation-based analysis to digest the conformational dynamics of the mitoBK channels in terms of their modulation by flavonoids	7
Design of inhibitor peptide sequences based on the interfacial knowledge of the protein G-IgG crystallographic complex and their binding studies with IgG	7
Erythrocytes membrane fluidity changes induced by adenylyl cyclase cascade activation: study using fluorescence recovery after photobleaching	7
A quantitative interspecies comparison of the respiratory mucociliary clearance mechanism	7
Quenching of G4-DNA intrinsic fluorescence by ligands	7
Correction to: Lipoic acid nanoforms based on phosphatidylcholine: production and characteristics	7
Reciprocal effect on lateral diffusion of receptor for advanced glycation endproducts and toll-like receptor 4 in the HEK293 cell membrane	6
Structural and functional characterization of Caenorhabditis elegans cyclic GMP-activated channel TAX-4 via molecular dynamics simulations	6
Revealing the single-channel characteristics of OprD (OccAB1) porins from hospital strains of Acinetobacter baumannii	6
Molecular dynamics study of collective water vibrations in a DNA hydration shell	6
The sleeping bacterium: shedding light on the resuscitation mechanism	6
A comparative characterisation of commercially available lipid-polymer nanoparticles formed from model membranes	6
On the possibility of the existence of orienting hydrodynamic steering effects in the kinetics of receptor–ligand association	6
On the utility of microfluidic systems to study protein interactions: advantages, challenges, and applications	6
Rethinking the protein folding problem from a new perspective	6
Microfabricated cantilevers for parallelized cell-cell adhesion measurements	6
Correction to: Thermodynamics of protein folding: methodology, data analysis and interpretation of data	6
Comparative sedimentation equilibrium analysis of two IgG1 glycoforms: IgGCri and IgGWid	5
AAV analysis by sedimentation velocity analytical ultracentrifugation: beyond empty and full capsids	5
Systematic noise removal from analytical ultracentrifugation data with UltraScan	5
Exploring the influence of water micro assemblies on protein folding, enzyme catalysis and membrane dynamics	5
Mammalian Nudt15 hydrolytic and binding activity on methylated guanosine mononucleotides	5
Amyloid fibril length distribution from dynamic light scattering data	5
Analytical ultracentrifugation as a tool for exploring COSAN assemblies	5
Improved Hodgkin–Huxley type model for neural action potentials	5
On-the-fly resolution enhancement in X-ray protein crystallography using electric field	5
Atomistic molecular dynamics simulations of tubulin heterodimers explain the motion of a microtubule	5
Peptide-based pore formation and cell membrane deformation: European Biophysics Journal Prizes at EBSA 2023	5