Applied Microbiology and Biotechnology

Papers
(The TQCC of Applied Microbiology and Biotechnology is 14. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-06-01 to 2026-06-01.)
ArticleCitations
Synergism between metallic nanoparticles and antibiotics241
Assessing the functional diversity of rhizobacteria from cacao by partitioning root and shoot biomasses197
The many functions of carbohydrate-active enzymes in family GH65: diversity and application178
Impact of Bacillus licheniformis from yaks following antibiotic therapy in mouse model150
Postbiotic-based recombinant receptor activator of NF-κB ligand enhanced oral vaccine efficiency in chicken126
Antifungal characterizations of a novel endo-β-1,6-glucanase from Flavobacterium sp. NAU1659110
Development of shuttle vectors for rapid prototyping of engineered Synechococcus sp. PCC700295
Mushroom β-glucans: application and innovation for food industry and immunotherapy88
Effects of reducing, stabilizing, and antibiotic agents on “Candidatus Kuenenia stuttgartiensis”86
Basidiomycota strains as whole-cell biocatalysts for the synthesis of high-value natural benzaldehydes84
Chimeric lipoproteins for leptospirosis vaccine: immunogenicity and protective potential78
Sequential uptake of aldoses over fructose and enhanced phosphate solubilization in Rhizobium sp. RM77
Synthesis of polymeric nanoparticles by double emulsion and pH-driven: encapsulation of antibiotics and natural products for combating Escherichia coli infections73
Gibberellic acid overproduction in Fusarium fujikuroi using regulatory modification and transcription analysis70
Quorum quenching effect of cyclodextrins on the pyocyanin and pyoverdine production of Pseudomonas aeruginosa68
Rare earth contamination of edible vegetation: Ce, La, and summed REE in fungi66
Biotechnological and endophytic-mediated production of centellosides in Centella asiatica65
Biodegradation of polyurethane by the microbial consortia enriched from landfill65
Microbial elimination of carbamate pesticides: specific strains and promising enzymes63
Mechanisms of microbial co-aggregation in mixed anaerobic cultures62
Adaptive evolution of Salmonella Typhimurium LT2 exposed to carvacrol lacks a uniform pattern61
Synergistic corrosion effects of magnetite and microorganisms: microbial community dependency60
Identification of Burkholderia cenocepacia non-coding RNAs expressed during Caenorhabditis elegans infection58
Effects of rice-prawn (Macrobrachium nipponense) co-culture on the microbial community of soil57
Physiological benefits of Akkermansia muciniphila under high-altitude hypoxia55
Biovalorisation of agro-industrial wastes into astaxanthin by Xanthophyllomyces dendrorhous54
Development of efficient 5-ketogluconate production system by Gluconobacter japonicus54
Mycorrhizal symbiosis and the nitrogen nutrition of forest trees51
The serine/threonine protein kinase MpSTE1 directly governs hyphal branching in Monascus spp.51
Optimization and cholesterol-lowering activity of exopolysaccharide from Lactiplantibacillus paraplantarum NCCP 96250
New emerging materials with potential antibacterial activities50
Polyethylenimine linked with chitosan improves astaxanthin production in Haematococcus pluvialis50
Heterologous expressing melittin in a probiotic yeast to evaluate its function for promoting NSC-34 regeneration50
Unveiling the importance of the C-terminus in the sugar acid dehydratase of the IlvD/EDD superfamily49
Sensing chemical-induced DNA damage using CRISPR/Cas9-mediated gene-deletion yeast-reporter strains49
Biosensing systems for the detection and quantification of methane gas48
Novel yeast-based biosensor for environmental monitoring of tebuconazole48
Analysis of substrate specificity of cytochrome P450 monooxygenases involved in trichothecene toxin biosynthesis48
Enzymatic upcycling of wild-simulated ginseng leaves for enhancing biological activities and compound K48
Unraveling endophytic diversity in dioecious Siraitia grosvenorii: implications for mogroside production48
Silver nanoparticle effect on Salmonella enterica isolated from Northern West Egypt food, poultry, and calves48
Using dielectrophoretic spectra to identify and separate viable yeast cells46
Brij-58 supplementation enhances menaquinone-7 biosynthesis and secretion in Bacillus natto46
Clustered surface amino acid residues modulate the acid stability of GH10 xylanase in fungi45
Research progress and application of enzymatic synthesis of glycosyl compounds45
Alteration of oral bacteriome of smokeless tobacco users and their association with oral cancer45
Temporal variations of bacterial and eukaryotic community in coastal waters—implications for aquaculture43
Photosynthetic performance of Chlamydopodium (Chlorophyta) cultures grown in outdoor bioreactors42
Functions and substrate selectivity of diacylglycerol acyltransferases from Mortierella alpina42
Degradation mechanism of difructose dianhydride III in Blautia species41
Tailor-made solvents for microbial carotenoids recovery41
An enhanced activity and thermostability of chimeric Bst DNA polymerase for isothermal amplification applications40
Effect of micro-aeration on syntrophic and methanogenic activity in anaerobic sludge40
Ferritin from Mycobacterium abscessus is involved in resistance to antibiotics and oxidative stress40
Metabolic engineering of Shewanella oneidensis to produce glutamate and itaconic acid40
Multiple amplification-based fluorometric aptasensor for highly sensitive detection of Staphylococcus aureus38
Genetic analysis of acyl-CoA carboxylases involved in lipid accumulation in Rhodococcus jostii RHA138
Development and evaluation of rapid and accurate one-tube RPA-CRISPR-Cas12b-based detection of mcr-1 and tet(X4)38
Induction and metabolomic analysis of hairy roots of Atractylodes lancea38
Environmental modulation of exopolysaccharide production in the cyanobacterium Synechocystis 680338
Identification of a plastic-degrading enzyme from Cryptococcus nemorosus and its use in self-degradable plastics37
Intestinal microbial community well explain larval growth than feed types37
Updated component analysis method for naturally occurring sophorolipids from Starmerella bombicola37
Unveiling the repressive mechanism of a PPS-like regulator (PspR) in polyhydroxyalkanoates biosynthesis network37
Bifunctional peptides as alternatives to copper-based formulations to control citrus canker37
New temperature-switchable acyl homoserine lactone-regulated expression vector36
A novel dual-epigenetic inhibitor enhances recombinant monoclonal antibody expression in CHO cells36
Identification of traits to improve co-assimilation of glucose and xylose by adaptive evolution of Spathaspora passalidarum and Scheffersomyces stipitis yeasts36
Enhanced chlorobenzene removal by internal magnetic field through initial cell adhesion and biofilm formation36
Improved recombinant expression of soluble cathepsin B and L in Escherichia coli36
Beauveria bassiana transcriptomics reveal virulence-associated shifts during insect lipid assimilation36
Development of multiplex allele-specific RT-qPCR assays for differentiation of SARS-CoV-2 Omicron subvariants36
A method for the analysis of methylmercury and total Hg in fungal matrices36
Green synthesized Ag nanoparticles stimulate gene expression and paclitaxel production in Corylus avellana cells35
Genetic structure and population diversity of Phytophthora infestans strains in Pacific western Canada34
Towards chlorocytes for therapeutic intravascular photosynthesis34
Dynamics and regulatory role of circRNAs in Asian honey bee larvae following fungal infection34
Correction to: Thermostability engineering of industrial enzymes through structure modification34
A new blocking ELISA for detection of foot-and-mouth disease non-structural protein (NSP) antibodies in a broad host range34
LL-37_Renalexin hybrid peptide exhibits antimicrobial activity at lower MICs than its counterpart single peptides33
Reconstitution of (1→3)-β-D-glucans measurement system using recombinant Limulus polyphemus Factor G33
Yeast cell vacuum infusion into fungal pellets as a novel cell encapsulation methodology33
Is heterogeneity in large-scale bioreactors a real problem in recombinant protein synthesis by Pichia pastoris?33
Rapid growth of antimicrobial resistance: the role of agriculture in the problem and the solutions33
Correction to: Strategy for the design of a bioreactor for L-lysine immobilized fermentation using Corynebacterium glutamicun33
Prevalence of Escherichia coli in electrogenic biofilm on activated carbon in microbial fuel cell33
Properties and biotechnological applications of microbial deacetylase33
Elimination of editing plasmid mediated by theophylline riboswitch in Zymomonas mobilis32
Drug repositioning: doxazosin attenuates the virulence factors and biofilm formation in Gram-negative bacteria32
Gn protein expressed in plants for diagnosis of severe fever with thrombocytopenia syndrome virus32
Enhancing the productivity and proliferation of CHO-K1 cells by oncoprotein YAP (Yes-associated protein)32
Understanding the Streptomyces albulus response to low-pH stress at the interface of physiology and transcriptomics32
A study on the association between gut microbiota, inflammation, and type 2 diabetes31
Pseudomonadota in the oral cavity: a glimpse into the environment-human nexus31
Fungal communities are more sensitive to mildew than bacterial communities during tobacco storage processes31
Poly-β-hydroxybutyrate production by Synechocystis MT_a24 in a raceway pond using urban wastewater31
Aspergillus oryzae PrtR alters transcription of individual peptidase genes in response to the growth environment31
Distinct roles of carbohydrate-binding modules in multidomain β-1,3–1,4-glucanase on polysaccharide degradation30
Enhancing Escherichia coli abiotic stress resistance through ornithine lipid formation30
Genomics analysis of KPC-2 and NDM-5-producing Enterobacteriaceae in migratory birds from Qinghai Lake, China30
Aromatic residues in N-terminal domain of archaeal trehalase affect the folding and activity of catalytic domain30
Textiles as fomites in the healthcare system30
Key insights into secondary metabolites from various Chaetomium species30
DNA extraction leads to bias in bacterial quantification by qPCR30
Microbial ecology of biofiltration used for producing safe drinking water30
Monkeypox virus A29L protein as the target for specific diagnosis and serological analysis30
Roles of pH and phosphate in rare earth element biosorption with living acidophilic microalgae30
Bacteriophage cocktail for biocontrol of soft rot disease caused by Pectobacterium species in Chinese cabbage30
Functional and structural analysis of a cyclization domain in a cyclic β-1,2-glucan synthase30
Photoheterotroph improved the growth and nutrient levels of Chlorella vulgaris and the related molecular mechanism29
Correction to: Production and applications of fluorobody from redox-engineered Escherichia coli29
Biotechnological applications of biofilms formed by osmotolerant and halotolerant yeasts29
Nitrogen balance and supply in Australasian mushroom composts29
Rapamycin enhanced the production of 2-phenylethanol during whole-cell bioconversion by yeast28
Dental plaque microbiota sequence counts for microbial profiling and resistance genes detection28
Random mutagenesis and disulfide bond formation improved thermostability in microbial transglutaminase28
Community composition of phytopathogenic fungi significantly influences ectomycorrhizal fungal communities during subtropical forest succession28
Life and death of Pseudokirchneriella subcapitata: physiological changes during chronological aging28
Discovery, characterization, and synthetic potential of two novel bacterial aryl-alcohol oxidases28
Impact of organic solvents on the catalytic performance of halohydrin dehalogenase28
Recombinant mannan-binding lectin magnetic beads increase pathogen detection in immunocompromised patients28
Rerouting phytosterol degradation pathway for directed androst-1,4-diene-3,17-dione microbial bioconversion28
Redesign of γ-glutamyl transpeptidase from Bacillus subtilis for high-level production of L-theanine by cavity topology engineering27
Manganese reductive dissolution coupled to Sb mobilization in contaminated shooting range soil27
Role of AtYap1 in the reactive oxygen species regulation of lovastatin production in Aspergillus terreus27
Characterization of the exopolymer-producing Pseudoalteromonas sp. S8-8 from Antarctic sediment27
Application of recombinant TGF-β1 inhibitory peptide to alleviate isoproterenol-induced cardiac fibrosis26
Combinatorial metabolic engineering enables high yield production of α-arbutin from sucrose by biocatalysis26
Phage cocktail alleviated type 2 diabetes by reshaping gut microbiota and decreasing proinflammatory cytokines26
Roles of cigar microbes in flavor formation during roasted-rice leachate fermentation26
Fungal carboxylate transporters: recent manipulations and applications26
Enhancement of anti-tumor activity in melanoma using arginine deiminase fused with 30Kc19α protein26
Microbial electrosynthesis of methane and acetate—comparison of pure and mixed cultures25
Rhodotorula sp.–based biorefinery: a source of valuable biomolecules25
Helicobacter pylori promotes gastric cancer progression through the tumor microenvironment25
Mycelial differentiation linked avermectin production in Streptomyces avermitilis studied with Raman imaging25
A photobioreactor for production of algae biomass from gaseous emissions of an animal house25
Microbial astaxanthin: from bioprocessing to the market recognition25
Biochemical and genetic characterization comparison of four extradiol dioxygenases in Rhizorhabdus wittichii RW125
CRISPR-Cas system: from diagnostic tool to potential antiviral treatment25
Enhancing catalytic efficiency of Bacillus subtilis laccase BsCotA through active site pocket design24
Canine Mucosal Artificial Colon: development of a new colonic in vitro model adapted to dog sizes24
Black yeasts in hypersaline conditions24
Characterization of a novel tetravalent botulism antitoxin based on receptor-binding domain of BoNTs24
Effects of compound prebiotics as prophylactic and therapeutic supplementation in a mouse model of acute colitis24
Establishment of an indirect ELISA for Mycobacterium tuberculosis MTB39A protein antibody24
Thermostability engineering of industrial enzymes through structure modification24
High fat diet–induced hyperlipidemia and tissue steatosis in rabbits through modulating ileal microbiota24
Identifying environmental factors affecting the microbial community composition on outdoor structural timber23
Acyl carrier protein tag can enhance tobacco etch virus protease stability and promote its covalent immobilisation23
Biosynthesis of animal-free recombinant chondroitin sulfate E using a functional chondroitin sulfotransferase in E. coli23
Kinetics and products of Thermotoga maritima β-glucosidase with lactose and cellobiose23
High molecular/low acetylated chitosans reduce adhesion of Campylobacter jejuni to host cells by blocking JlpA23
Metagenomics analysis reveals differences in rumen microbiota in cows with low and high milk protein percentage23
A new function of a putative UDP-glucose 4-epimerase on the expression of glycoside hydrolase genes in Aspergillus aculeatus23
Membrane fatty acid desaturase: biosynthesis, mechanism, and architecture23
Correlation study on microbial communities and volatile flavor compounds in cigar tobacco leaves of diverse origins23
Enhanced selenocysteine biosynthesis for seleno-methylselenocysteine production in Bacillus subtilis23
Enhancing the imidase activity of BpIH toward 3-isobutyl glutarimide via semi-rational design23
Restoration of cefixime-induced gut microbiota changes by a prebiotic blend in a mouse model23
Enhancing regioselectivity of sucrose phosphorylase by loop engineering for glycosylation of l-ascorbic acid22
New insights into microbial interactions and putative competitive mechanisms during the hydrogen production from tequila vinasses22
Effect of soil bioremediation on soil microbial community structure aimed at controlling tobacco bacterial wilt22
Developing a separation system to enable real-time recovery of acetone-butanol during fermentation22
P26 enhances baculovirus gene delivery by modulating the mammalian antiviral response22
Halophilic archaea as tools for bioremediation technologies22
Colloidal gold and fluorescent immunochromatographic test strips for canine parvovirus detection22
Maternal amoxicillin affects piglets colon microbiota: microbial ecology and metabolomics in a gut model22
A novel double antibody sandwich quantitative ELISA for detecting porcine epidemic diarrhea virus infection22
Sodium butyrate supplementation impacts the gastrointestinal bacteria of dairy calves before weaning22
Characterization and immunological effect of outer membrane vesicles from Pasteurella multocida on macrophages22
Pharmacokinetics and pharmacodynamics of antibacterial peptide NZX in Staphylococcus aureus mastitis mouse model21
Microbial and enzymatic battle with food contaminant zearalenone (ZEN)21
Transcription factors enhancing synthesis of recombinant proteins and resistance to stress in Yarrowia lipolytica21
Recombinant production and characterization of L-glutaminase (glsA) as a promiscuity therapeutic enzyme21
Flavonoids from Sedum aizoon L. inhibit Botrytis cinerea by negatively affecting cell membrane lipid metabolism21
The application of bacteria-derived dehydrogenases and oxidases in the synthesis of gold nanoparticles21
Bacterial cellulose production by Novacetimonas hansenii MSCL 1646 on apple juice21
Antimicrobial activity of lipids extracted from Hermetia illucens reared on different substrates21
Comparison of iSeq and MiSeq as the two platforms for 16S rRNA sequencing in the study of the gut of rat microbiome21
Digital PCR: a tool in clostridial mutant selection and detection21
Engineering D-glucose utilization in Azospirillum brasilense Sp7 promotes rice root colonization21
Occurrence and dissemination of antibiotic resistance genes in mine soil ecosystems20
Vertical distribution of Candidatus Methylomirabilis and Methanoperedens in agricultural soils20
Transcriptomic responses of the fast-growing bacterium Vibrio natriegens during cold-induced loss of culturability20
Aptamer-based technology for detecting Bacillus subtilis in soil20
Microbial community development during syngas methanation in a trickle bed reactor with various nutrient sources20
Arabinan hydrolysis by GH43 enzymes of Hungateiclostridium clariflavum and the potential synergistic mechanisms20
Development of high-copy number plasmids in Pseudoalteromonas haloplanktis TAC12520
Antimicrobial resistance: new insights and therapeutic implications20
β-oxidation–polyhydroxyalkanoates synthesis relationship in Pseudomonas putida KT2440 revisited20
China’s environmental solutions20
Gravity sedimentation of eukaryotic algae Euglena gracilis accelerated by ethanol cultivation20
A mycofactocin-associated dehydrogenase is essential for ethylene glycol metabolism by Rhodococcus jostii RHA120
Optimization of welan gum extraction and purification using lysozyme and alkaline protease20
A child is not an adult: development of a new in vitro model of the toddler colon20
Discovery and biocatalytic characterization of opine dehydrogenases by metagenome mining20
The potential role of plant secondary metabolites on antifungal and immunomodulatory effect20
A novel Saclayvirus Acinetobacter baumannii phage genomic analysis and effectiveness in preventing pneumonia20
Genome-scale metabolic network models: from first-generation to next-generation20
Development and evaluation of a blocking ELISA for serological diagnosis of equine infectious anemia20
The alteration of intestinal mucosal α-synuclein expression and mucosal microbiota in Parkinson’s disease20
Pathway crosstalk between the central metabolic and heme biosynthetic pathways in Phanerochaete chrysosporium20
Oral microbiota in preschoolers with rampant caries: a matched case–control study20
Alocasia odora–mediated synthesis of silver nanoparticles, their cytotoxicity, and virucidal potential20
Non-growth inhibitory doses of dimethyl sulfoxide alter gene expression and epigenetic pattern of bacteria20
Fabrication of cell plastics composed only of unicellular green alga Chlamydomonas reinhardtii as a raw material20
Exploring Rhodospirillum rubrum response to high doses of carbon monoxide under light and dark conditions20
Impact of osmotic stress on production, morphology, and fitness of Beauveria bassiana blastospores19
Recombinant T7 RNA polymerase production using ClearColi BL21(DE3) and animal-free media for in vitro transcription19
Structural diversification of vitamin D using microbial biotransformations19
Electrochemical biosensor detection on respiratory and flaviviruses19
Membrane protein Bcsdr2 mediates biofilm integrity, hyphal growth and virulence of Botrytis cinerea19
Production of recombinant vesicular stomatitis virus-based vectors by tangential flow depth filtration19
Biotechnological approaches for suppressing Microcystis blooms: insights and challenges19
Parity changed fecal microbiota of sows and its correlation with milk long-chain fatty acid profiles19
Cephalosporin C biosynthesis and fermentation in Acremonium chrysogenum19
Bacterial cellulose production by a strain of Komagataeibacter rhaeticus isolated from residual loquat19
Comprehensive insights into the metabolism characteristics of small RNA Qrr4 in Vibrio alginolyticus19
Cleavage of cell junction proteins as a host invasion strategy in leptospirosis19
Correction: Comprehensive metagenomic analysis of stress‑resistant and‑sensitive Listeria monocytogenes19
Characterisation of cytotoxicity and immunomodulatory effects of glycolipid biosurfactants on human keratinocytes19
Conversion of polyploid and alloploid Saccharomyces sensu stricto strains to leu2 mutants by genome DNA editing19
Preparation and application of fluorescent monoclonal antibodies recognizing goat CD4+CD25+ regulatory T cells19
Application of MALDI-TOF MS for enumerating bacterial constituents of defined consortia19
Fusarium verticillioides Pex7/20 mediates peroxisomal PTS2 pathway import, pathogenicity, and fumonisin B1 biosynthesis19
Production, characterization, and application of phage-derived PK34 recombinant anti-microbial peptide19
Aspergillus fumigatus escape mechanisms from its harsh survival environments19
Enhancing surfactin production in B. velezensis Bs916 combined cumulative mutagenesis and expression key enzymes19
Development of robust, indigenous ELISA for detection of IgG antibodies against CoV-2 N and S proteins: mass screening19
DnaJ, a promising vaccine candidate against Ureaplasma urealyticum infection19
Targeting of phagolysosomes containing conidia of the fungus Aspergillus fumigatus with polymeric particles19
Distinction of chia varieties in vivo and in vitro based on the flow cytometry and rosmarinic acid production19
Mulches assist degraded soil recovery via stimulating biogeochemical cycling: metagenomic analysis18
Research progress on carotenoid production by Rhodosporidium toruloides18
Estimating the bias related to DNA recovery from hemp stems for retting microbial community investigation18
Holistic monitoring of Campylobacter jejuni biofilms with NanoLuc bioluminescence18
Enhanced production of aspochalasin D through genetic engineering of Aspergillus flavipes18
Exploring metabolic effects of dipeptide feed media on CHO cell cultures by in silico model-guided flux analysis18
Combining high pressure and electric fields towards Nannochloropsis oculata eicosapentaenoic acid-rich extracts18
Multiplex qPCR for differentiation of Mycobacterium avium subspecies paratuberculosis in active and passive infection of goats18
Characterization of bifunctional alginate lyase Aly644 and antimicrobial activity of enzymatic hydrolysates18
Perspective on the biotechnological production of bacterial siderophores and their use18
New two-stage pH combined with dissolved oxygen control strategy for cyclic β-1,2 glucans synthesis18
Biological control of soft rot in potato by κ-carrageenan carriers encapsulated microbial predators18
Characterization of an efficient CRISPR-iCas9 system in Yarrowia lipolytica for the biosynthesis of carotenoids18
Immobilization of Rhodococcus by encapsulation and entrapment: a green solution to bitter citrus by-products18
Gene rppA co-regulated by LRR, SigA, and CcpA mediates antibiotic resistance in Bacillus thuringiensis18
Combined transcriptomic and pangenomic analyses guide metabolic amelioration to enhance tiancimycins production18
Disruption of SMC-related genes promotes recombinant cholesterol esterase production in Burkholderia stabilis18
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