Applied Microbiology and Biotechnology

Papers
(The TQCC of Applied Microbiology and Biotechnology is 12. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-10-01 to 2025-10-01.)
ArticleCitations
Characterization of a novel broad-spectrum endolysin PlyD4 encoded by a highly conserved prophage found in Aeromonas hydrophila ST251 strains271
Development of shuttle vectors for rapid prototyping of engineered Synechococcus sp. PCC7002176
Biovalorisation of agro-industrial wastes into astaxanthin by Xanthophyllomyces dendrorhous158
Synthesis of polymeric nanoparticles by double emulsion and pH-driven: encapsulation of antibiotics and natural products for combating Escherichia coli infections146
Correction to: Impacts of elicitors on metabolite production and on antioxidant potential and tyrosinase inhibition in watercress microshoot cultures137
Therapeutic efficacy of new botulinum toxin identified in CCUG 7968 strain133
Assessing the functional diversity of rhizobacteria from cacao by partitioning root and shoot biomasses117
Some novel features of strong promoters discovered in Cytophaga hutchinsonii115
Sequential fungal pretreatment of unsterilized Miscanthus: changes in composition, cellulose digestibility and microbial communities105
Sequential uptake of aldoses over fructose and enhanced phosphate solubilization in Rhizobium sp. RM96
Mycorrhizal symbiosis and the nitrogen nutrition of forest trees78
Conversion of viridicatic acid to crustosic acid by cytochrome P450 enzyme-catalysed hydroxylation and spontaneous cyclisation75
Basidiomycota strains as whole-cell biocatalysts for the synthesis of high-value natural benzaldehydes72
Biotechnological interventions of in vitro propagation and production of valuable secondary metabolites in Stevia rebaudiana71
Effects of mokF gene deletion and overexpression on the Monacolin K metabolism yields of Monascus purpureus70
Identification of a protective Bacteroides strain of alcoholic liver disease and its synergistic effect with pectin70
New emerging materials with potential antibacterial activities65
Impact of Bacillus licheniformis from yaks following antibiotic therapy in mouse model62
Effect of P availability on straw-induced priming effect was mainly regulated by fungi in croplands62
Physiological benefits of Akkermansia muciniphila under high-altitude hypoxia61
Eukaryotic community composition and dynamics during solid waste decomposition61
The many functions of carbohydrate-active enzymes in family GH65: diversity and application61
Antifungal characterizations of a novel endo-β-1,6-glucanase from Flavobacterium sp. NAU165960
Effects of reducing, stabilizing, and antibiotic agents on “Candidatus Kuenenia stuttgartiensis”56
Factors affecting the isolation and diversity of marine sponge-associated bacteria54
Adaptive evolution of Salmonella Typhimurium LT2 exposed to carvacrol lacks a uniform pattern53
Identification of Burkholderia cenocepacia non-coding RNAs expressed during Caenorhabditis elegans infection52
Shifting the distribution: modulation of the lipid profile in Yarrowia lipolytica via iron content51
Synergism between metallic nanoparticles and antibiotics51
Mechanisms of microbial co-aggregation in mixed anaerobic cultures51
Heterologous expressing melittin in a probiotic yeast to evaluate its function for promoting NSC-34 regeneration50
Biodegradation of polyurethane by the microbial consortia enriched from landfill50
Microbial elimination of carbamate pesticides: specific strains and promising enzymes49
Geographic and position-based variations in phyllospheric bacterial communities present on flue-cured tobacco48
Mushroom β-glucans: application and innovation for food industry and immunotherapy47
Quorum quenching effect of cyclodextrins on the pyocyanin and pyoverdine production of Pseudomonas aeruginosa47
Development of efficient 5-ketogluconate production system by Gluconobacter japonicus46
Chimeric lipoproteins for leptospirosis vaccine: immunogenicity and protective potential46
Rare earth contamination of edible vegetation: Ce, La, and summed REE in fungi46
Effects of rice-prawn (Macrobrachium nipponense) co-culture on the microbial community of soil46
Postbiotic-based recombinant receptor activator of NF-κB ligand enhanced oral vaccine efficiency in chicken46
Synergistic corrosion effects of magnetite and microorganisms: microbial community dependency45
Gibberellic acid overproduction in Fusarium fujikuroi using regulatory modification and transcription analysis45
Biotechnology of banana (Musa spp.): multi-dimensional progress and prospect of in vitro–mediated system44
Biotechnological and endophytic-mediated production of centellosides in Centella asiatica44
The serine/threonine protein kinase MpSTE1 directly governs hyphal branching in Monascus spp.44
Ultra-high irradiance (UHI) blue light: highlighting the potential of a novel LED-based device for short antifungal treatments of food contact surfaces44
Co-transfer of plasmid-encoded bla carbapenemases genes and mercury resistance operon in high-risk clones of Klebsiella pneumoniae43
Optimization and cholesterol-lowering activity of exopolysaccharide from Lactiplantibacillus paraplantarum NCCP 96243
Silver nanoparticle effect on Salmonella enterica isolated from Northern West Egypt food, poultry, and calves42
Degradation mechanism of difructose dianhydride III in Blautia species42
Photosynthetic performance of Chlamydopodium (Chlorophyta) cultures grown in outdoor bioreactors42
New temperature-switchable acyl homoserine lactone-regulated expression vector41
Induction and metabolomic analysis of hairy roots of Atractylodes lancea41
Analysis of substrate specificity of cytochrome P450 monooxygenases involved in trichothecene toxin biosynthesis41
Environmental modulation of exopolysaccharide production in the cyanobacterium Synechocystis 680340
Improved recombinant expression of soluble cathepsin B and L in Escherichia coli40
Green synthesized Ag nanoparticles stimulate gene expression and paclitaxel production in Corylus avellana cells40
Bifunctional peptides as alternatives to copper-based formulations to control citrus canker40
Effect of micro-aeration on syntrophic and methanogenic activity in anaerobic sludge40
Brij-58 supplementation enhances menaquinone-7 biosynthesis and secretion in Bacillus natto39
A large-scale whole-genome sequencing analysis reveals false positives of bacterial essential genes38
Ferritin from Mycobacterium abscessus is involved in resistance to antibiotics and oxidative stress38
Identification of a plastic-degrading enzyme from Cryptococcus nemorosus and its use in self-degradable plastics38
Identification of traits to improve co-assimilation of glucose and xylose by adaptive evolution of Spathaspora passalidarum and Scheffersomyces stipitis yeasts38
Enantioselectivity and key residue of Herbaspirillum huttiense monooxygenase in asymmetric epoxidation of styrenes38
A method for the analysis of methylmercury and total Hg in fungal matrices38
Novel yeast-based biosensor for environmental monitoring of tebuconazole38
Unveiling the repressive mechanism of a PPS-like regulator (PspR) in polyhydroxyalkanoates biosynthesis network37
Agri-biotechnology of coriander (Coriandrum sativum L.): an inclusive appraisal37
A novel dual-epigenetic inhibitor enhances recombinant monoclonal antibody expression in CHO cells37
Using dielectrophoretic spectra to identify and separate viable yeast cells36
Polyethylenimine linked with chitosan improves astaxanthin production in Haematococcus pluvialis36
Genetic analysis of acyl-CoA carboxylases involved in lipid accumulation in Rhodococcus jostii RHA135
Multiple amplification-based fluorometric aptasensor for highly sensitive detection of Staphylococcus aureus35
Alteration of oral bacteriome of smokeless tobacco users and their association with oral cancer35
Intestinal microbial community well explain larval growth than feed types34
Temporal variations of bacterial and eukaryotic community in coastal waters—implications for aquaculture34
Tailor-made solvents for microbial carotenoids recovery34
Rescuing humanity by antimicrobial peptides against colistin-resistant bacteria34
Enhanced chlorobenzene removal by internal magnetic field through initial cell adhesion and biofilm formation33
Biosensing systems for the detection and quantification of methane gas32
Unveiling the importance of the C-terminus in the sugar acid dehydratase of the IlvD/EDD superfamily32
Functions and substrate selectivity of diacylglycerol acyltransferases from Mortierella alpina32
Enzymatic upcycling of wild-simulated ginseng leaves for enhancing biological activities and compound K32
Metabolic engineering of Shewanella oneidensis to produce glutamate and itaconic acid32
Sensing chemical-induced DNA damage using CRISPR/Cas9-mediated gene-deletion yeast-reporter strains32
Construction of a novel filamentous fungal protein expression system based on redesigning of regulatory elements31
Development of multiplex allele-specific RT-qPCR assays for differentiation of SARS-CoV-2 Omicron subvariants31
Enhancing β-alanine production from glucose in genetically modified Corynebacterium glutamicum by metabolic pathway engineering31
Clustered surface amino acid residues modulate the acid stability of GH10 xylanase in fungi31
Development of a competitive ELISA for detecting antibodies against genotype 1 hepatitis E virus31
An enhanced activity and thermostability of chimeric Bst DNA polymerase for isothermal amplification applications31
Beauveria bassiana transcriptomics reveal virulence-associated shifts during insect lipid assimilation31
Updated component analysis method for naturally occurring sophorolipids from Starmerella bombicola31
Research progress and application of enzymatic synthesis of glycosyl compounds31
Unraveling endophytic diversity in dioecious Siraitia grosvenorii: implications for mogroside production31
Biological activity of oxadiazole and thiadiazole derivatives30
Biotechnological production of bacosides from cell and organ cultures of Bacopa monnieri30
Development and evaluation of rapid and accurate one-tube RPA-CRISPR-Cas12b-based detection of mcr-1 and tet(X4)30
Genetic structure and population diversity of Phytophthora infestans strains in Pacific western Canada29
Prevalence of Escherichia coli in electrogenic biofilm on activated carbon in microbial fuel cell29
Gn protein expressed in plants for diagnosis of severe fever with thrombocytopenia syndrome virus29
Fungal communities are more sensitive to mildew than bacterial communities during tobacco storage processes29
Monkeypox virus A29L protein as the target for specific diagnosis and serological analysis28
Reconstitution of (1→3)-β-D-glucans measurement system using recombinant Limulus polyphemus Factor G28
Properties and biotechnological applications of microbial deacetylase28
Correction to: Thermostability engineering of industrial enzymes through structure modification28
Yeast cell vacuum infusion into fungal pellets as a novel cell encapsulation methodology28
Correction to: Strategy for the design of a bioreactor for L-lysine immobilized fermentation using Corynebacterium glutamicun28
Understanding the Streptomyces albulus response to low-pH stress at the interface of physiology and transcriptomics28
Elimination of editing plasmid mediated by theophylline riboswitch in Zymomonas mobilis27
LL-37_Renalexin hybrid peptide exhibits antimicrobial activity at lower MICs than its counterpart single peptides27
Key insights into secondary metabolites from various Chaetomium species27
Use of red, far-red, and near-infrared light in imaging of yeasts and filamentous fungi27
Genomics analysis of KPC-2 and NDM-5-producing Enterobacteriaceae in migratory birds from Qinghai Lake, China27
Distinct roles of carbohydrate-binding modules in multidomain β-1,3–1,4-glucanase on polysaccharide degradation27
Drug repositioning: doxazosin attenuates the virulence factors and biofilm formation in Gram-negative bacteria27
A study on the association between gut microbiota, inflammation, and type 2 diabetes26
Autotrophic lactate production from H2 + CO2 using recombinant and fluorescent FAST-tagged Acetobacterium woodii strains26
Functional and structural analysis of a cyclization domain in a cyclic β-1,2-glucan synthase26
Pseudomonadota in the oral cavity: a glimpse into the environment-human nexus26
Dynamics and regulatory role of circRNAs in Asian honey bee larvae following fungal infection26
Enhancing the productivity and proliferation of CHO-K1 cells by oncoprotein YAP (Yes-associated protein)26
Bacteriophage cocktail for biocontrol of soft rot disease caused by Pectobacterium species in Chinese cabbage26
Rapid growth of antimicrobial resistance: the role of agriculture in the problem and the solutions26
Enhancing Escherichia coli abiotic stress resistance through ornithine lipid formation25
DNA extraction leads to bias in bacterial quantification by qPCR25
Poly-β-hydroxybutyrate production by Synechocystis MT_a24 in a raceway pond using urban wastewater25
Application of recombinant TGF-β1 inhibitory peptide to alleviate isoproterenol-induced cardiac fibrosis25
Towards chlorocytes for therapeutic intravascular photosynthesis25
A new blocking ELISA for detection of foot-and-mouth disease non-structural protein (NSP) antibodies in a broad host range25
Is heterogeneity in large-scale bioreactors a real problem in recombinant protein synthesis by Pichia pastoris?25
Correction to: Production and applications of fluorobody from redox-engineered Escherichia coli25
Aspergillus oryzae PrtR alters transcription of individual peptidase genes in response to the growth environment25
Microbial ecology of biofiltration used for producing safe drinking water25
Roles of pH and phosphate in rare earth element biosorption with living acidophilic microalgae25
Textiles as fomites in the healthcare system25
The physicochemical approaches of altering growth and biochemical properties of medicinal plants in saline soils25
Black yeasts in hypersaline conditions24
PTT-quant: a new method for direct identification and absolute quantification of premature transcription termination events, following the example of bacterial riboswitches24
Discovery, characterization, and synthetic potential of two novel bacterial aryl-alcohol oxidases24
Microbial astaxanthin: from bioprocessing to the market recognition24
Phage cocktail alleviated type 2 diabetes by reshaping gut microbiota and decreasing proinflammatory cytokines24
60Coγ induction improves the protective effect of Acetobacter pasteurianus against ionizing radiation in mice24
Biotechnological applications of biofilms formed by osmotolerant and halotolerant yeasts24
Combinatorial metabolic engineering enables high yield production of α-arbutin from sucrose by biocatalysis24
Role of AtYap1 in the reactive oxygen species regulation of lovastatin production in Aspergillus terreus24
Rhodotorula sp.–based biorefinery: a source of valuable biomolecules24
Life and death of Pseudokirchneriella subcapitata: physiological changes during chronological aging24
Fungal carboxylate transporters: recent manipulations and applications24
Impact of organic solvents on the catalytic performance of halohydrin dehalogenase24
Characterization of the exopolymer-producing Pseudoalteromonas sp. S8-8 from Antarctic sediment24
Roles of cigar microbes in flavor formation during roasted-rice leachate fermentation24
Enhancement of anti-tumor activity in melanoma using arginine deiminase fused with 30Kc19α protein24
Recombinant mannan-binding lectin magnetic beads increase pathogen detection in immunocompromised patients23
Community composition of phytopathogenic fungi significantly influences ectomycorrhizal fungal communities during subtropical forest succession23
Random mutagenesis and disulfide bond formation improved thermostability in microbial transglutaminase23
Rerouting phytosterol degradation pathway for directed androst-1,4-diene-3,17-dione microbial bioconversion23
Dental plaque microbiota sequence counts for microbial profiling and resistance genes detection23
Nitrogen source as a modulator of the metabolic activity of Pedobacter lusitanus NL19: a transcriptomic approach23
Photoheterotroph improved the growth and nutrient levels of Chlorella vulgaris and the related molecular mechanism23
Aromatic residues in N-terminal domain of archaeal trehalase affect the folding and activity of catalytic domain23
Rapamycin enhanced the production of 2-phenylethanol during whole-cell bioconversion by yeast23
Biological cellulose saccharification using a coculture of Clostridium thermocellum and Thermobrachium celere strain A922
A photobioreactor for production of algae biomass from gaseous emissions of an animal house22
Biochemical and genetic characterization comparison of four extradiol dioxygenases in Rhizorhabdus wittichii RW122
Validation of housekeeping genes as internal controls for gene expression studies on biofilm formation in Bacillus velezensis22
Mycelial differentiation linked avermectin production in Streptomyces avermitilis studied with Raman imaging22
Manganese reductive dissolution coupled to Sb mobilization in contaminated shooting range soil22
Helicobacter pylori promotes gastric cancer progression through the tumor microenvironment22
Machine learning: its challenges and opportunities in plant system biology21
CRISPR-Cas system: from diagnostic tool to potential antiviral treatment21
Redesign of γ-glutamyl transpeptidase from Bacillus subtilis for high-level production of L-theanine by cavity topology engineering21
Flavonoids from Sedum aizoon L. inhibit Botrytis cinerea by negatively affecting cell membrane lipid metabolism21
Membrane fatty acid desaturase: biosynthesis, mechanism, and architecture21
High molecular/low acetylated chitosans reduce adhesion of Campylobacter jejuni to host cells by blocking JlpA21
Nitrogen balance and supply in Australasian mushroom composts21
Characterization of an extracellular α-xylosidase involved in xyloglucan degradation in Aspergillus oryzae21
Microbial electrosynthesis of methane and acetate—comparison of pure and mixed cultures21
New insights into microbial interactions and putative competitive mechanisms during the hydrogen production from tequila vinasses21
P26 enhances baculovirus gene delivery by modulating the mammalian antiviral response21
Evolutionary and reverse engineering to increase Saccharomyces cerevisiae tolerance to acetic acid, acidic pH, and high temperature21
Improved live-cell PCR method for detection of organophosphates degrading opd genes and applications21
Thermostability engineering of industrial enzymes through structure modification21
Restoration of cefixime-induced gut microbiota changes by a prebiotic blend in a mouse model21
Establishment of an indirect ELISA for Mycobacterium tuberculosis MTB39A protein antibody21
The reliance of glycerol utilization by Cupriavidus necator on CO2 fixation and improved glycerol catabolism21
Microbial and enzymatic battle with food contaminant zearalenone (ZEN)20
Effects of compound prebiotics as prophylactic and therapeutic supplementation in a mouse model of acute colitis20
Maternal amoxicillin affects piglets colon microbiota: microbial ecology and metabolomics in a gut model20
Identifying environmental factors affecting the microbial community composition on outdoor structural timber20
Colloidal gold and fluorescent immunochromatographic test strips for canine parvovirus detection20
Microbial associations for bioremediation. What does “microbial consortia” mean?20
Halophilic archaea as tools for bioremediation technologies20
Enhancing the imidase activity of BpIH toward 3-isobutyl glutarimide via semi-rational design20
Acyl carrier protein tag can enhance tobacco etch virus protease stability and promote its covalent immobilisation20
Effect of soil bioremediation on soil microbial community structure aimed at controlling tobacco bacterial wilt20
Developing a separation system to enable real-time recovery of acetone-butanol during fermentation20
A novel double antibody sandwich quantitative ELISA for detecting porcine epidemic diarrhea virus infection20
Characterization and immunological effect of outer membrane vesicles from Pasteurella multocida on macrophages20
Transcriptomic profiling of nitrogen fixation and the role of NifA in Methylomicrobium buryatense 5GB120
Characterization of a novel tetravalent botulism antitoxin based on receptor-binding domain of BoNTs20
A new function of a putative UDP-glucose 4-epimerase on the expression of glycoside hydrolase genes in Aspergillus aculeatus20
Antimicrobial activity of lipids extracted from Hermetia illucens reared on different substrates20
Enhancing catalytic efficiency of Bacillus subtilis laccase BsCotA through active site pocket design20
Kinetics and products of Thermotoga maritima β-glucosidase with lactose and cellobiose20
Characterization of a thermotolerant aryl-alcohol oxidase from Moesziomyces antarcticus oxidizing 5-hydroxymethyl-2-furancarboxylic acid19
The endophytic bacterium Bacillus koreensis 181–22 promotes rice growth and alleviates cadmium stress under cadmium exposure19
Canine Mucosal Artificial Colon: development of a new colonic in vitro model adapted to dog sizes19
Enhancing regioselectivity of sucrose phosphorylase by loop engineering for glycosylation of l-ascorbic acid19
Correlation study on microbial communities and volatile flavor compounds in cigar tobacco leaves of diverse origins19
Metagenomics analysis reveals differences in rumen microbiota in cows with low and high milk protein percentage19
Enhanced selenocysteine biosynthesis for seleno-methylselenocysteine production in Bacillus subtilis19
PEGylation increases antitumoral activity of arginine deiminase of Streptococcus pyogenes19
Sodium butyrate supplementation impacts the gastrointestinal bacteria of dairy calves before weaning19
High fat diet–induced hyperlipidemia and tissue steatosis in rabbits through modulating ileal microbiota19
Biosynthesis of animal-free recombinant chondroitin sulfate E using a functional chondroitin sulfotransferase in E. coli19
Digital PCR: a tool in clostridial mutant selection and detection19
Discovery and biocatalytic characterization of opine dehydrogenases by metagenome mining18
Fabrication of cell plastics composed only of unicellular green alga Chlamydomonas reinhardtii as a raw material18
China’s environmental solutions18
Engineering D-glucose utilization in Azospirillum brasilense Sp7 promotes rice root colonization18
Real-time metabolic heat-based specific growth rate soft sensor for monitoring and control of high molecular weight hyaluronic acid production by Streptococcus zooepidemicus18
Exceptionally rich keratinolytic enzyme profile found in the rare actinomycetes Amycolatopsis keratiniphila D2T18
Microbial community development during syngas methanation in a trickle bed reactor with various nutrient sources18
Alocasia odora–mediated synthesis of silver nanoparticles, their cytotoxicity, and virucidal potential18
Exploring Rhodospirillum rubrum response to high doses of carbon monoxide under light and dark conditions18
Development and evaluation of a blocking ELISA for serological diagnosis of equine infectious anemia18
Membrane protein Bcsdr2 mediates biofilm integrity, hyphal growth and virulence of Botrytis cinerea18
Transcriptomic responses of the fast-growing bacterium Vibrio natriegens during cold-induced loss of culturability18
The potential role of plant secondary metabolites on antifungal and immunomodulatory effect18
Tuning the catalytic performances of a sucrose isomerase for production of isomaltulose with high concentration18
Development of high-copy number plasmids in Pseudoalteromonas haloplanktis TAC12518
Phage therapeutics: from promises to practices and prospectives18
The application of bacteria-derived dehydrogenases and oxidases in the synthesis of gold nanoparticles18
Biotechnological approaches for suppressing Microcystis blooms: insights and challenges18
Developing efficient vanillin biosynthesis system by regulating feruloyl-CoA synthetase and enoyl-CoA hydratase enzymes18
A mycofactocin-associated dehydrogenase is essential for ethylene glycol metabolism by Rhodococcus jostii RHA118
Recombinant and endogenous ways to produce methylated phospholipids in Escherichia coli18
Optimization of welan gum extraction and purification using lysozyme and alkaline protease18
Vertical distribution of Candidatus Methylomirabilis and Methanoperedens in agricultural soils18
Arabinan hydrolysis by GH43 enzymes of Hungateiclostridium clariflavum and the potential synergistic mechanisms18
Occurrence and dissemination of antibiotic resistance genes in mine soil ecosystems18
Recombinant production and characterization of L-glutaminase (glsA) as a promiscuity therapeutic enzyme18
Pathway crosstalk between the central metabolic and heme biosynthetic pathways in Phanerochaete chrysosporium18
Aptamer-based technology for detecting Bacillus subtilis in soil18
DnaJ, a promising vaccine candidate against Ureaplasma urealyticum infection18
Genome-scale metabolic network models: from first-generation to next-generation17
Characterisation of cytotoxicity and immunomodulatory effects of glycolipid biosurfactants on human keratinocytes17
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