Ecological Modelling

Article	Citations
Editorial Board	240
A protocol for implementing parameter sensitivity analyses in complex ecosystem models	85
Multimedia fates and ecological risk control strategies of phthalic acid esters in a lake recharged by reclaimed water using the QWASI fugacity model	76
Modified framework to reflect contribution of soil storage in emergy synthesis under different agricultural practices at farm level	71
The critical challenge of nonstationarity in ecological modelling	66
The return of the Caracal Caracal caracal: 56 Years of Population Changes in Israel	61
Optimising profits from timber harvest and the biodiversity conservation value in a central European beech forest using a novel bioeconomic forestry model	60
Real-time assessment of live forest fuel moisture content and flammability by using space-time universal kriging	49
A generational randomized growth model for fall-spawning Atlantic herring: Insights from real-world data	46
Editorial Board	45
Editorial Board	43
Mathematical modeling in behavior responses: The tendency-prediction based on a persistence model on real-time data	42
Editorial Board	41
Modelling assessment of how small-scale vertical movements of infectious sea lice larvae can affect their large-scale distribution in fjordic systems	39
Individual-based modelling of adaptive physiological traits of cyanobacteria: Responses to light history	39
Analysis of carbon emission drivers and peak carbon forecasts for island economies	38
Calibration and validation of the AquaCrop model for production arrangements of forage cactus and grass in a semi-arid environment	37
A new model formulation for host depletion in parasitoids	37
Resource objective wildfire leveraged to restore old growth forest structure while stabilizing carbon stocks in the southwestern United States	36
Impact of population growth and housing development on the riverine environment: Identifying environmental threat and solution in the Wanggu River, Indonesia	35
Machine-learning modeling on tree mortality and growth reduction of temperate forests with climatic and ecophysiological parameters	35
Simulation of forest carbon fluxes by integrating remote sensing data into biome-BGC model	34
Modeling collective motion for fish schooling via multi-agent reinforcement learning	33
Snow runoff modelling in the upper Indus River Basin and its implication to energy water food nexus	33
Modelling the effects of copepod diel vertical migration and community structure on ocean carbon flux using an agent-based model	32

Estimating stomatal conductance under drought: Parameterizing a phenomenological model and evaluating roles of the energy balance equation	32
Editorial Board	31
When can few-species models describe dynamics within a complex community?	30
Mechanistic simulations of kelp populations in a dynamic landscape of light, temperature, and winter storms	30
Modelling interactive effects of biological and environmental factors on fine-scale coral settlement patterns	30
Corrigendum to ‘The return of the Caracal (Caracal caracal): 56-years of population changes in Israel’ [Ecological Modelling 508 (2025):111197]	30
Land suitability assessment and self-sufficiency evaluation for fodder crop production in a hyper arid environment coupling GIS-based multi-criteria decision making and optimization	29
Unfolding carbon inequality across Belt and Road Initiative countries and regions under a global trade network	29
Indirect effects of pine marten recovery result in benefits to native prey through suppression of an invasive species and a shared pathogen	28
Seasonal pattern of dengue infection in Singapore: A mechanism-based modeling and prediction	28
How sustainable development goals have transformed our world? Evolution of the ecological networks of the Italian economy	28
Integrating functional connectivity and habitat stability into fish habitat assessment and optimizing ecological operation	27
Coastal generalized ecosystem model (CGEM) 1.0: Flexible model formulations for simulating complex biogeochemical processes in aquatic ecosystems	27
Corrigendum to “How can oak regeneration in the Leipzig Floodplain Forest be effectively supported by femel plantations? Application of a demographic forest model” [Ecological Modelling 499 (2025) 110	26
Balancing economics and ecology in ocean ecosystems: A bioeconomic predator-prey model	25
Radial growth models for Pedunculate Oak in the Baltics, Latvia	25
Modelling the dynamics of soil moisture and soil water salinity in tropical saltmarshes	25
Functional responses in habitat selection as a management tool to evaluate agri-environment schemes for farmland birds	25
Addition of finer scale data and uncertainty analysis increases precision of geospatial suitability model for non-native plants in the US	24
Analysis of simulated trap counts arising from correlated and biased random walks	24
Modelling the effect of genotype (PRNP) linked to susceptibility, infection duration and prion shedding on chronic wasting disease dynamics of cervids	24
Socio-econ-ecosystem multipurpose simulator (SEEMS): An easy-to-apply agent-based model for simulating small-scale coupled human and nature systems in biological conservation hotspots	23
Intelligent classification model of land resource use using deep learning in remote sensing images	23
Separating acoustic signal into underlying behaviors with self-exciting point process models	23
Less is more: Less herbicide does more when biological control is present in Pontederia crassipes	22
Uncertainties in future ecosystem services under land and climate scenarios: The case of erosion in the Alps	22
Editorial Board	22
Individual-based modeling of shelled pteropods	22
Development and application of a bioenergetics growth model for multiple early life stages of an ecologically important marine fish	21
A high resolution hydrodynamic-biogeochemical-oyster-filtration model predicts that the presence of oysters (Crassostrea virginica) can improve, or reduce, water quality depending upon oyster abundanc	21
One century of carbon dynamics in the eastern Canadian boreal forest under various management strategies and climate change projections	21
Incorporating biodiversity impacts in land use decisions	21
Revisiting the dynamic simulation model of land-use changes in the Sudano-sahelian countries of Africa (SALU): An open-access application to Senegal	21
Long-term assessment of land-use and climate change on water scarcity in an arid basin in Iran	21
Comparison of several models for estimating gross primary production of drip-irrigated maize in arid regions	21
Estimating the fundamental niche: Accounting for the uneven availability of existing climates in the calibration area	20
Building ecosystem services-based ecological networks in energy and chemical industry areas	20
Revolutionising sustainability using a new triplet: A system dynamic model	20
A comparison of machine learning and statistical species distribution models: Quantifying overfitting supports model interpretation	20
A method for estimating biomass of age-0 fish in case of protracted spawning leading to multiple larval cohorts in the population	20
Reconsidering the Price equation: Benchmarking the analytical power of additive partitioning in ecology	20
Age structured partial differential equations model for Culex mosquito abundance	20
A Monte-Carlo based 3-D ballistics model for guiding bat carcass surveys using environmental and turbine operational data	19
Is toxicity a curse or blessing, or both?—Searching answer from a disease-induced consumer-resource system	19
Editorial Board	19
Assessing between-individual variability in bioenergetics modelling: Opportunities, challenges, and potential applications	19
Modeling of the spread of non-adaptive traits in a natural population due to self-compatibility	19
Dynamic energy budget modelling of anuran metamorphosis	19
Combating over-commercialization in ecotourism through collaborative governance: A game-theoretic modeling analysis	19
Corrigendum to “Unified process model-based assessment of environmental interactions and ecosystem services of a managed fishpond-reed agroecosystem” [Ecological Modelling 506 (2025) 111151]	19

Modeling and analysis of maize agroecosystem dynamics with stresses	18
Uncertainty in forecasting land cover land use at a watershed scale: Towards enhanced sustainable land management	18
Thermodynamic exploration of the adaptive cycle	18
Ecological effect of seasonally changing temperature on the life cycle of Aurelia aurita	18
An individual-based model for exploration of population and stock dynamics in marine fishes	18
Simulation and analysis of dengue transmission dynamics using advanced fuzzy arithmetic	18
A dynamic outbreak distribution model (DODM) for an irruptive folivore: The western spruce budworm	18
Spatial mechanistic modelling to simulate movements and contacts between wildlife and livestock in Southern Africa	18
Informing Surveillance through the Characterization of Outbreak Potential of Chronic Wasting Disease in White-Tailed Deer	17
Effects of temperature and salinity on growth of Aurelia aurita	17
Integrating ecosystem services modeling and efficiencies in decision-support models conceptualization for watershed management	17
Bush encroachment with climate change in protected and communal areas: A species distribution modelling approach	17
Parameter sensitivity and transferability for simulating ET and GPP of Dryland ecosystems across a climate gradient	17
Energy-systems accounting in industrial-natural systems; An energy analysis of a managed forest ecosystem including food web biomass dynamics	17
Performance comparison of sewage treatment plants before and after their upgradation using emergy evaluation combined with economic analysis: A case from Southwest China	17
On the evolution of dispersal strategies under the costs of acquisition of private and social information	16
Understanding the drivers of fish variability in an end-to-end model of the Northern Humboldt Current System	16
Combining CENTURY model and vulnerability assessment index to estimate aboveground biomass and ecological vulnerability of grassland: An analysis in Northwest Sichuan Plateau	16
Spatial-temporal evolution of carbon storage and its driving factors in the Shanxi section of the Yellow River Basin, China	16
Metacommunity stability and persistence for predation turnoff in selective patches	16
Framing settlement systems as spatial adaptive systems	16
Comparing distribution of harbour porpoise using generalized additive models and hierarchical Bayesian models with integrated nested laplace approximation	15
The landscape altered the interaction between vegetation and climate in the desert oasis of Hotan River Basin, Xinjiang, China	15
Moths exhibit strong memory among cooperative species of other taxonomic groups: An empirical study	15
Comparing commonly used aquatic habitat modeling methods for native fish	15
Demystifying Monte Carlo methods in R: A guide from Metropolis–Hastings to Hamiltonian Monte Carlo with biological growth equation examples	15
Modeling drought mortality and resilience of savannas and forests in tropical Asia	15
Field-scale simulation of runoff and water quality in a paddy field: A study of novel RWQSPad model	15
Emergy ecological footprint analysis of Yaghooti grape production in the Sistan region of Iran	15
Species profiles support recommendations for quality filtering of opportunistic citizen science data	15
Predicting the potential impact of forest fires on runoff and sediment loads using a distributed hydrological modeling approach	15
Analyzing sustainable development strategies through multi-method integration in the Green Economy Model	15
Modeling soil carbon accumulation in irrigated agricultural systems	14
Current bioclimatic suitability and climate change impacts on the risk of cacao moniliasis invasion in Pará	14
Improving species distribution models for climate change studies: ecological plausibility and performance metrics	14
Editorial Board	14
A hierarchical Bayesian approach for incorporating expert opinions into parametric survival models: A case study of female Ixodes ricinus ticks exposed to various temperature and relative humidity con	14
Correlated Random Walk of tuna in arrays of Fish Aggregating Devices: A field-based model from passive acoustic tagging	14
Understanding plankton ecosystem dynamics under realistic micro-scale variability requires modeling at least three trophic levels	14
Using Hidden Markov Models to develop ecosystem indicators from non-stationary time series	14
Identifying optimal cloud cover for enhanced forest carbon uptake: Periodic-case NEE-overshoot modelling	13
Canary palms in rural areas as invasion bridges: Exploring simulated red palm weevil spread across date palm plantations	13
Modelling system dynamics as a socio-ecological perspective to support human-beaver interactions	13
Dynamic evolution and simulation of habitat quality in arid regions: A case study of the Hexi region, China	13
Multiscale habitat suitability modeling for a threatened raptor offers insight into ecological model transferability	13
New applications of an old individual-based model for biological dynamics	13
When does artificial intelligence replace process-based models in ecological modelling?	13
The impact of dynamic wind flow behavior on forest fire spread using cellular automata: Application to the watershed BOUKHALEF (Morocco)	13
DiaThor: R package for computing diatom metrics and biotic indices	13
Simulating critical nutrient loadings of regime shift in the shallow plateau Lake Dianchi	13
Modeling the life cycle of four types of phytoplankton and their bloom mechanisms in a benthic-pelagic coupled ecosystem	13
Simulation of N2O emissions from greenhouse vegetable production under different management systems in North China	13
Multi-scenario spatial optimization for future development in arid and semi-arid regions based on early warning of ecological risk	13
A state-space model for estimating pinniped pup production from serial counts at breeding colonies	12
Attractor of a neutral individual-based forest model captures spatiotemporal structure characteristics of a mature tropical forest	12
Real world data for real world problems: Importance of appropriate spatial resolution modelling to inform decision makers in marine management	12
The application of a plant community model to evaluate adaptation strategies for alleviating climate change impacts on grassland productivity, biodiversity and forage quality	12
Self-healing time of population under dynamic disturbance	12
Controls and characteristics of biomass quantization in size-structured planktonic ecosystem models	12
Quantitative evaluation of the effects of bycatch on native species using mathematical models	12
Unifying occupancy-detection and local frequency scaling (Frescalo) models	12
Dryland vegetation pattern dynamics driven by inertial effects and secondary seed dispersal	12
Sector aggregation effect on embodied carbon emission based on city-centric global multi-region input-output (CCG-MRIO) model	12
Does climate change stimulate citizens' responses to conserving urban forest? Insights from stimulus-organism-response theory	12
Impact of different invasion methods of invasive species on omnivorous food webs	12
Coefficients of association between nominal and fully ranked ordinal variables with applications to ecological network analysis	12
Predicting shifts in demography of Orbicella franksi following simulated disturbance and restoration	12
Howard T. Odum’s contributions to evolutionary theory	12
A new interval meta-goal programming for sustainable planning of agricultural water-land use nexus	12
Editorial Board	12
A spatially explicit model of tree leaf litter accumulation in fire maintained longleaf pine forests of the southeastern US	12
A quantitative application of diffusion of innovations for modeling the spread of conservation behaviors	12
Preparing for and managing crown-of-thorns starfish outbreaks on reefs under threat from interacting anthropogenic stressors	12
Corrigendum to ‘Modeling mixoplankton along the biogeochemical gradient of the Southern North Sea’ Ecological Modelling 458 (2021) 0304-3800/109690	12
A data-driven high spatial resolution model of biomass accumulation and crop yield: Application to a fragmented desert-oasis agroecosystem	12
Sampling effort required for fitting spatially explicit models of species distribution dynamics	11
Corrigendum to "Comparing the performance of global, geographically weighted and ecologically weighted species distribution models for Scottish wildcats using GLM and Random Forest predictive modeling	11
Impacts of land-use intensity on ecosystems stability	11
An exploration of solar-induced chlorophyll fluorescence (SIF) factors simulated by SCOPE for capturing GPP across vegetation types	11
Modeling terrestrial net ecosystem exchange using machine learning techniques based on flux tower measurements	11

Transient perturbations reveal distinct strategies for reserve benefits in life history-dependent ecosystems	11
Editorial Board	11
Using interaction profile to measure species uniqueness in food webs	11
Production potential of seaweed and shellfish integrated aquaculture in Narragansett Bay (Rhode Island, U.S.) using an ecosystem model	11
An analytical solution for optimising multi-species detection surveys	11
Editorial Board	11
The emergence of imperfect philopatry and fidelity in spatially and temporally heterogeneous environments	11
Systems modeling for agroecology and land restoration	11
How much is enough? Optimizing beehive stocking densities to maximize the production of a pollinator-dependent crop	11
Climatic sensitivity of seasonal ice-cover, water temperature and biogeochemical cycling in Lake 239 of the Experimental Lakes Area (ELA), Ontario, Canada	11
A spatiotemporal SEIR model for predicting wheat stripe and leaf rusts epidemics	11
System evolution model of human disturbances in panda habitats	11
Fish survival subject to algal bloom: Resource-based growth models with algal digestion delay and detritus-nutrient recycling delay	11
Potential thermal safety margin for plant photosynthesis derived from local temperature variability	11
Ecological modeling and parameter estimation for predator–prey dynamics in a closed habitat: A case study of Isle Royale	11
Development of models for sustainable green mussel cultivation under climate change events	11
A GIS-based approach for managing catch-and-release fisheries	11
Modeling Tree Recovery in Wind-Disturbed Forests with Dense Understory Species under Climate Change	11
The integration of hierarchical levels of scale in tree species distribution models of silver fir (Abies alba Mill.) and European beech (Fagus sylvatica L.) in mountain forests	11
Fungal pathogen transmission dynamics in North American salamanders: Mathematical insights for disease management	11
Modeling food dependent symbiosis in Exaiptasia pallida	11
Multi-sectoral analysis of smarter urban nitrogen metabolism: A case study of Suzhou, China	10
Using the roughness height and manning number in hydrodynamic model to estimate the impact of intensive oyster aquaculture by floating & fixed rafts on water exchange with an application in Qinzho	10
Which rice farming system is more environmentally friendly in Khuzestan province, Iran? A study based on emergy analysis	10
Modelling farmland dynamics in response to farmer decisions using an advanced irrigation-related agent-based model	10
Landscape ecology and urban spatial configuration: Exploring a methodological relationship. Application in Pelotas, Brazil	10
Editorial Board	10
Methods for comparing theoretical models parameterized with field data using biological criteria and Sobol analysis	10
Nonlinear impacts of climate change on dengue transmission in mainland China: Underlying mechanisms and future projection	10
Modeling urban growth effects on carrying capacity in arid and semi-arid regions using system dynamics	10
Modelling the spatial shifts of functional groups in the Barents Sea using a climate-driven spatial food web model	10
Productivity-environment models for Scots pine plantations in Bulgaria: an interaction of anthropogenic origin peculiarities and climate change	10
Spatiotemporal evolution of county level ecological security based on an emergy ecological footprint model: The case of Dingxi, China	10
Ecological flow considering hydrological season and habitat suitability for a variety of fish	10
Contrasting occupancy models with presence-only models: Does accounting for detection lead to better predictions?	10
Temporal transferability of species abundance models to study the changes of breeding bird species based on land cover changes	10
Constructing time-series submerged aquatic vegetation by integrating process-based modeling and satellite images	10
Editorial Board	10
Bayesian multi-level calibration of a process-based maize phenology model	10
Multi-objective optimization of forest ecosystem services under uncertainty	10
Improving forest gross primary productivity estimation through climate and trait integration	10
Editorial Board	10
Using the ODD protocol and NetLogo to replicate agent-based models	10
Spatial structure of natural boxwood and the invasive box tree moth can promote coexistence	10
H.T. Odum’s contributions to springs ecology and treatment wetlands	10
Using system equalization principle to study the effects of multiple factors to the development of bee colony	10
Effect of study area extent on the potential distribution of Species: A case study with models for Raoiella indica Hirst (Acari: Tenuipalpidae)	10
Analysis of the sustainability index for ecologically low-input integrated farming: A comprehensive assessment of environmental, economic, and social impact	10
Climate covariate selection influences MaxEnt model predictions and predictive accuracy under current and future climates	10
Using a time-dynamic food web model to compare predation and fishing mortality in Pleuroncodes monodon (Galatheidae: Crustaceae) and other benthic and demersal resource species off central Chile	10
Analysis of a mathematical model for golden mussels infestation	10
Emergy theory to quantify the sustainability of large cascade hydropower projects in the upper Yangtze	9
Crossing paths between empirical ecologists and meta-ecology modellers to advance marine functional connectivity estimation and prediction	9
What grows, adapts and lives in the digital sphere? Systematic literature review on the dynamic modelling of flora and fauna in digital twins	9
Are maximum yields sustainable? Effect of intra-annual time-scales on MSY, stability and resilience	9
Assessing bivalve growth using bio-energetic models	9
LoggingLab: An R package to simulate reduced-impact selective logging in tropical forests using forest inventory data	9
Mathematical validation of cleaning symbiosis between Macrobrachium lamarrei and Labeo rohita as an effective bio-control method against Argulus bengalensis	9
Toward a better understanding of forest spatial patterns:A generalisation of the uniform angle index	9
Simulating implications of fish behavioral response for managing hypoxia in estuaries with spatial dissolved oxygen variability	9
Investigating the need to replace the conventional method of sugar beet production in lorestan province, iran based on the arguments obtained from emergy calculations	9
Resilience, indirect effects and cycling in ecological networks	9
Development of interval transient pollution distribution model and its application in the Fenghuangshan drinking water source	9
A spatially-explicit stochastic model for the Gulf Coast Tick	9
On the use of machine learning methods to improve the estimation of gross primary productivity of maize field with drip irrigation	9
Balancing act: A participatory system dynamics approach for Mar Menor’s sustainable future	9
Model-based experiments as epistemic evidence in paleoecology	9
Computational assessment of Amazon forest plots regrowth capacity under strong spatial variability for simulating logging scenarios	9
Integrating equity and justice in marine ecosystem models: An incremental but meaningful approach	9
Algorithms going wild – A review of machine learning techniques for terrestrial ecology	9
Using GIS-based multicriteria decision analysis to prioritize invasive plant treatment: A creative solution for a pernicious problem	9
Recommendations for estimating and detecting time-varying spawner-recruit dynamics in fish populations	9
Diffusivity and bias movement velocity of Cryptolestes ferrugineus (Coleoptera: Laemophloeidae) adults under different temperature and moisture differences	9
Howard T. Odum’s contribution to Marxian ecological thought	9
Evolution of the concept of ecological integrity and its study through networks	9
Interpreting stoichiometric homeostasis and flexibility of soil microbial biomass carbon, nitrogen, and phosphorus	9
The influence of phytoplankton size fractions on the carbon export ratio in the surface ocean	9
Information sharing promotes bacterial diversity in oligotrophic environment with low-dose X-ray radiation based on modeling and simulation of agent-based model	9
Analytical model for pullout behavior of root system	9
Evaluating the skill of correlative species distribution models trained with mechanistic model output	9
Overcoming conceptual hurdles to accurately represent trees as cohorts in forest landscape models	8
Predicting restoration and aquaculture potential of eastern oysters through an eco-physiological mechanistic model	8
Investigating the effect of pesticides on Daphnia population dynamics by inferring structure and parameters of a stochastic model	8
Stability analysis and Hopf bifurcation of a brown planthopper–rice model under the effect of monsoon	8
A long-term multiparametric analysis of benthic macroinvertebrate responses to anthropogenic stressors, including a novel multimetric index for evaluating the ecological conditions of mountain rivers	8
Modeling the carbon costs of plant phosphorus acquisition in Amazonian forests	8
A general DDE framework to describe insect populations: Why delays are so important?	8
Combined influences of environmental enrichment and harvesting mediate rich dynamics in an intraguild predation fishery system	8
Carbon stock model of Pinus massoniana in the subtropical zone of China: An integrated method of biomass and carbon content coefficient	8
Dynamic distribution modelling using a native invasive species, the mountain pine beetle	8
Fine-scale surface complexity promotes temperature extremes but reduces the spatial extent of refugia on coastal rocks	8
Snow leopard connectivity through trans-boundary areas surrounding the Dzungarian Basin in Kazakhstan	8
Integrated SSP-RCP Scenarios for Modeling the Impacts of Climate Change and Land Use on Ecosystem Services in East Africa	8
The metabolic interpretation of the von Bertalanffy growth rate	8
The role of squid for food web structure and community-level metabolism	8