Ecological Modelling

Article	Citations
Spatiotemporal evolution of county level ecological security based on an emergy ecological footprint model: The case of Dingxi, China	245
Vegetation pattern formation in Daisyworld model with greenhouse effect	150
Improving forest gross primary productivity estimation through climate and trait integration	139
RETRACTED: Simulating fish passage impacts on a fragmented metapopulation of Paddlefish	122
Comparison of spring phenology simulation in central Asian grasslands	66
Simulating biotic disturbance responses in forests requires a balance of model performance, complexity, and accessibility	61
Different degrees of decline in China's fishing efforts are beneficial to the sustainable development of coral reef fisheries resources on Yongxing Island China	58
Investigating fishery and climate change effects on the conservation status of odontocetes in the Northern Ionian Sea (Central Mediterranean Sea)	57
Analysis of carbon emission drivers and peak carbon forecasts for island economies	53
Chaotic mixotroph dynamics arise with nutrient loading: Implications for mixotrophy as a harmful bloom forming mechanism	53
Editorial Board	53
Modeling transport and feeding of juvenile Kemp's ridley sea turtles on the West Florida shelf	51
The relationship between confidence intervals and distributions of estimators for parameters of deterministic models	48
Test of model of equivalence of tree height growth and transpiration rates in percolation-based phenomenology for root-soil interaction	36
Defining an ecological equation of state: Response to Riera et al. (2023)	33
Editorial Board	33
Using state-and-transition simulation models to scope post-fire success in restoring greater sage-grouse habitat	32
When nitrate treatment wins the battle against microbial reservoir souring but loses the war	31
Identification and analysis of areas prone to conflict with wild boar (Sus scrofa) in the vineyards of Malayer County, western Iran	31
Impact of population growth and housing development on the riverine environment: Identifying environmental threat and solution in the Wanggu River, Indonesia	31
The potential impacts of climate change on the distribution of key tree species and Cordyceps in Bhutan: Implications for ecological functions and rural livelihoods	29
Modelling PM10 removal in three Italian coastal Metropolitan Cities along a latitudinal gradient	29
Contrasting occupancy models with presence-only models: Does accounting for detection lead to better predictions?	28
Improving species distribution models for dominant trees in climate data-poor forests using high-resolution remote sensing	28
Timing of Calanus finmarchicus diapause in stochastic environments	27

Ecological role of marine mammals in the Magellan Strait: Insights from trophic modeling	25
Editorial Board	24
Retraction Notice to “Simulating fish passage impacts on a fragmented metapopulation of Paddlefish” [Ecological Modelling 495 (2024) 110806]	23
Projecting complex interactions between forest harvest and succession in the northern Acadian Forest Region	22
A tritrophic interaction model for an olive tree pest, the olive moth — Prays oleae (Bernard)	22
Corrigendum to Insights into the environmental conditions contributing to variability in the larval recruitment of the tropical sardine Sardinella lemuru	22
Bayesian networks facilitate updating of species distribution and habitat suitability models	22
Spatial structure of natural boxwood and the invasive box tree moth can promote coexistence	22
Reactive nitrogen losses from Canadian agricultural soils over 36 years	21
Editorial Board	21
Editorial Board	21
Modeling nitrogen dynamics and biomass production in rice paddy fields of cold regions with the ORYZA-N model	21
A social media-based framework for quantifying temporal changes to wildlife viewing intensity	20
Modeling the potential impacts of climate change on wheat yield in Iran: Evidence from national and provincial data analysis	20
A multi-objective optimization model for cropland design considering profit, biodiversity, and ecosystem services	20
Factors affecting functional diversity of grassland vegetations	20
Optimizing greenhouse design for enhanced microalgae production: A CFD Analysis of microclimate and water thermal dynamics in raceway ponds	20
Modelling the spatial shifts of functional groups in the Barents Sea using a climate-driven spatial food web model	20
A comparative study of production systems in the Goharkuh Taftan complex utilising emergy and economic analysis	20
Interdisciplinary design of a fish ramp using migration routes analysis	19
Editorial Board	19
Editorial Board	19
Modelling of tuna around fish aggregating devices: The importance of ocean flow and prey	19
Modelling assessment of how small-scale vertical movements of infectious sea lice larvae can affect their large-scale distribution in fjordic systems	19
Editorial Board	19
Using system equalization principle to study the effects of multiple factors to the development of bee colony	19
Using individual-based modelling to investigate a pluralistic explanation for the prevalence of sexual reproduction in animal species	19
Analysis of a mathematical model for golden mussels infestation	18
Editorial Board	18
Modelling species invasion using a metapopulation model with variable mortality and stochastic birth-death processes	18
Landscape ecology and urban spatial configuration: Exploring a methodological relationship. Application in Pelotas, Brazil	18
A mathematical model of the impacts of climate change on the winter tick epizootic in moose	18
Editorial Board	18
Editorial Board	18
Editorial Board	17
Was Allosaurus really predominantly a scavenger?	17
Concerns regarding the proposal for an ecological equation of state: an assessment starting from the organic biophysics of ecosystems (OBEC).	17
Editorial Board	17
Editorial Board	17
Using thermodynamics to understand the links between energy, information, structure and biodiversity in a human-transformed landscape	17
Development of methods for the simplification of complex group built causal loop diagrams: A case study of the Rechna doab	17
Transferability of tsetse habitat models between different regions in Kenya and Rwanda	16
Editorial Board	16
An abstract mathematical model for sustainable harvesting of a biological species on the boundary of a protected habitat	16
Modeling the biomass allocation of tree resprout in a fire-prone savanna	16
Editorial Board	16
Editorial Board	16
Not going with the flow: Ecological niche of a migratory seabird, the South American Tern Sterna hirundinacea	16
Resource objective wildfire leveraged to restore old growth forest structure while stabilizing carbon stocks in the southwestern United States	16
Using the roughness height and manning number in hydrodynamic model to estimate the impact of intensive oyster aquaculture by floating & fixed rafts on water exchange with an application in Qinzho	15

Mathematical modeling in behavior responses: The tendency-prediction based on a persistence model on real-time data	15
An aridity threshold model of fire sizes and annual area burned in extensively forested ecoregions of the western USA	15
Effects of a mobile disturbance pattern on dynamic patch networks and metapopulation persistence	15
Correcting for size bias in electrofishing removal samples	15
Which rice farming system is more environmentally friendly in Khuzestan province, Iran? A study based on emergy analysis	15
Simplifying a complex computer model: Sensitivity analysis and metamodelling of an 3D individual-based crop-weed canopy model	14
A biocontrol agent as a commensal in a plant-pest interaction	14
Sensitivity analysis of the FullCAM model: Context dependency and implications for model development to predict Australia's forest carbon stocks	14
Effects of phenotypic plasticity on diversification rates and adaptive evolution in simulated environments with different climatic and cost contexts	14
Modeling primary production: Developing the BZI model from the production-irradiance (P-I) curves	14
Individual-based modelling of adaptive physiological traits of cyanobacteria: Responses to light history	14
Temporal transferability of species abundance models to study the changes of breeding bird species based on land cover changes	14
Dynamic ammonia exchange within a mixed deciduous forest canopy in the Southern Appalachians	14
Managing pesticide resistance in Spodoptera frugiperda: A spatially explicit framework for identifying optimal treatment strategies	14
Sensitivity analysis of a hydrodynamic and harmful algal model in a riverine system	14
Patch spatial attributes and time to disturbance affect the emergence of source local populations within ephemeral habitats	13
lconnect R package: A versatile tool for evaluating landscape connectivity and prioritizing habitat patches in conservation research	13
Handling missing data in ecological studies: Ignoring gaps in the dataset can distort the inference	13
Ecological modeling evaluates the potential impacts of symbionts on plant pathogen vectoring in field populations	13
Real-time assessment of live forest fuel moisture content and flammability by using space-time universal kriging	13
Sensitivity analysis of a crop metapopulation model	13
Forecasting impacts of biological control under future climates: mechanistic modelling of an aphid pest and a parasitic wasp	13
Spatial E-PSR modelling for ecological sensitivity assessment for arid rangeland resilience and management	13
Consequences of intraspecific competition for floral resources in heterogeneous landscapes for eusocial bees	13
Editorial Board	13
A review of computing models for studying population dynamics of giant panda ecosystems	13
Methods for comparing theoretical models parameterized with field data using biological criteria and Sobol analysis	13
Coexistence conditions in generalized discrete-time models of insect population dynamics	13
Evaluating the skill of correlative species distribution models trained with mechanistic model output	12
Modeling lives saved from extreme heat by urban tree cover✰	12
Modeling the bioenergetics of two herbivorous fish species in the Mediterranean Sea: The native Sarpa salpa and the invasive Siganus rivulatus	12
TransparC2U–A two-pool, pedology oriented forest soil carbon simulation model aimed at user investigations of multiple uncertainties	12
Increased unpredictability in spruce budworm outbreaks following habitat loss and landscape fragmentation	12
Combined climate and regional mosquito habitat model based on machine learning	12
Comparing risk of chronic wasting disease occurrence using Bayesian hierarchical spatial models and different surveillance types	12
Ecological flow considering hydrological season and habitat suitability for a variety of fish	12
Dynamic simulation study of soil erosion intensity on slopes with different vegetation patterns in pisha sandstone area	12
Effects of joint invasion: How co-invaders affect each other's success in model food webs?	12
Modeling watershed carbon dynamics as affected by land cover change and soil erosion	12
On the use of ABACUS high resolution glider observations for the assessment of phytoplankton ocean biomass from CMEMS model products	11
Spatially weak syncronization of spreading pattern between Aedes Albopictus and dengue fever	11
Improving 3-PG calibration and parameterization using artificial neural networks	11
Differentially biased sampling strategies reveal the non-stationarity of species distribution models for Indian small felids	11
Plant competition under simultaneous adaptation by herbivores and pollinators	11
Extreme capital breeding for giants: Effects of body size on humpback whale energy expenditure and fasting endurance	11
A spatially implicit model fails to predict the structure of spatially explicit metacommunities under high dispersal	11
Trade-offs in resource access and health by avoidance of self-fouling, motivated via disgust	11
TVDI-based water stress coefficient to estimate net primary productivity in soybean areas	11
Modelling the spread of a novel endosymbiont infection in field populations of an aphid pest	11
A new model formulation for host depletion in parasitoids	11
Using citizen data in a population model to estimate population size of moose (Alces alces)	11
Promoting coordinated development of the fertilizer production-crop plantation combined system through an integrated approach	11
Analysis of the sustainability index for ecologically low-input integrated farming: A comprehensive assessment of environmental, economic, and social impact	11
A protocol for implementing parameter sensitivity analyses in complex ecosystem models	11
Modeling the effects of plant resistance, herbivore virulence, and parasitism, on the population dynamics of aphids and parasitoids in wheat and soybean in different climates	10
Modelling the effects of copepod diel vertical migration and community structure on ocean carbon flux using an agent-based model	10
Machine-learning modeling on tree mortality and growth reduction of temperate forests with climatic and ecophysiological parameters	10
Identifying influential parameters of a multi-species fish size spectrum model for a northern temperate lake through sensitivity analyses	10
Modified framework to reflect contribution of soil storage in emergy synthesis under different agricultural practices at farm level	10
Effect of agricultural landscape pattern on the qualitative food web of epigaeic arthropods in low hilly areas of northern China	10
Modeling Ganges river dolphin distribution and prioritizing areas for efficient conservation planning- a range-wide assessment	10
Merging empirical and mechanistic approaches to modeling aquatic visual foraging using a generalizable visual reaction distance model	10
Pairwise learning for predicting pollination interactions based on traits and phylogeny	10
Population projections from holey matrices: Using prior information to estimate rare transition events	10
Field observation and numerical modelling of supersaturated dissolved gas at river confluence	10
An integrated modeling approach to predict trophic state changes in a large Brazilian reservoir	10
A bioenergetics model for seasonal growth of Indian oil sardine (Sardinella longiceps) in the Indian west coast	10
Changes in soil carbon stocks under plantation systems and natural forests in Northeast India	10
Development and parameterization of a data likelihood model for geolocation of a bentho-pelagic fish in the North Pacific Ocean	10
Wetland carbon models: Applications for wetland carbon commercialization	9
A simulation model of functional habitat connectivity demonstrates the importance of species establishment in older forests	9
Fully Convolutional Neural Network: A solution to infer animal behaviours from multi-sensor data	9
Utilization of the DNDC model to estimate yield and CO2 and CH4 emissions in a cotton-wheat rotation under the influence of various tillage treatments	9
A curated list of R packages for ecological niche modelling	9
Pan-Atlantic 3D distribution model incorporating water column for commercial fish	9
A Bayesian approach to projecting forest dynamics and related uncertainty: An application to continuous cover forests	9
Snow runoff modelling in the upper Indus River Basin and its implication to energy water food nexus	9
Spatial patterns of correlation between conspecific species and size diversity in forest ecosystems	9
Integrating resource memory and cue-based territoriality to simulate movement dynamics: a process-explicit and pattern-oriented approach	9
Multi-sectoral analysis of smarter urban nitrogen metabolism: A case study of Suzhou, China	9

Cumulative reproduction model to quantify the production of the invasive species Arctodiaptomus dorsalis (Calanoida, Copepoda)	9
Combining Revealed and Stated Preferences to design a new urban park in a metropolitan area of North-Western Italy	9
Bumble bee pollination and the wildflower/crop trade-off: When do wildflower enhancements improve crop yield?	9
Global sensitivity analysis of APSIM-wheat yield predictions to model parameters and inputs	9
Multimedia fates and ecological risk control strategies of phthalic acid esters in a lake recharged by reclaimed water using the QWASI fugacity model	9
Correcting for the effects of class imbalance improves the performance of machine-learning based species distribution models	9
Quantifying greenhouse gas emissions in agricultural systems: a comparative analysis of process models	9
An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management	9
Corrigendum to “Spatial mechanistic modelling to simulate movements and contacts between wildlife and livestock in Southern Africa” [ecological modelling 498 (2024) /110863]	9
Nonlinear impacts of climate change on dengue transmission in mainland China: Underlying mechanisms and future projection	9
Corrigendum to ‘potential elevation shift of oriental beech (fagus orientalis L.) in hyrcanian mixed forest ecoregion under future global warming’	9
Landscape-scale drivers of endangered Cape Sable Seaside Sparrow (Ammospiza maritima mirabilis) presence using an ensemble modeling approach	9
Quantifying root turnover in grasslands from biomass dynamics: Application of the growth-maintenance respiration paradigm and re-analysis of historical data	9
Species distribution models applied to mosquitoes: Use, quality assessment, and recommendations for best practice	9
Yield estimation of Lycium barbarum L. based on the WOFOST model	9
Predicting methane emissions from paddy rice soils under biochar and nitrogen addition using DNDC model	9
From known to unknown unknowns through pattern-oriented modelling: Driving research towards the Medawar zone	9
Modeling collective motion for fish schooling via multi-agent reinforcement learning	9
Resilience, indirect effects and cycling in ecological networks	8
Toward a better understanding of forest spatial patterns:A generalisation of the uniform angle index	8
Modelling farmland dynamics in response to farmer decisions using an advanced irrigation-related agent-based model	8
Integrating monitoring and optimization modeling to inform flow decisions for Chinook salmon smolts	8
Larger territories reduce mortality risk for chimpanzees, wolves, and agents: Multiple lines of evidence in a model validation framework	8
Assessing food limitation for marine juvenile fishes in coastal nurseries using a bioenergetic approach	8
Calibration and validation of the AquaCrop model for production arrangements of forage cactus and grass in a semi-arid environment	8
Understanding and assessing demographic (in)equity resulting from extreme heat and direct sunlight exposure due to lack of tree canopies in Norfolk, VA using agent-based modeling	8
Editorial Board	8
A step towards the integration of spatial dynamics in population dynamics models: Eastern Bering Sea snow crab as a case study	8
Social-ecological systems modelling to understand the linkages between water, agriculture and rural systems,	8
Challenges, tasks, and opportunities in modeling agent-based complex systems	8
Modeling the impacts of temperature during nesting seasons on Loggerhead (Caretta caretta) Sea Turtle populations in South Florida	8
Sensitivity of aboveground biomass and species composition to climate change in boreal forests of Northeastern China	8
Using the ODD protocol and NetLogo to replicate agent-based models	8
‘metrix’: An R package for assessing the biological quality of water	8
Quantifying the overall effect of biotic interactions on species distributions along environmental gradients	8
Atlantis Ecosystem Model Summit 2022: Report from a workshop	8
Assessing bivalve growth using bio-energetic models	8
Predation on schooling fish is shaped by encounters between prey during school formation using an Ideal Gas Model of animal movement	8
The appropriate analytical solution for coupled leaf photosynthesis and stomatal conductance models for C3 plants	8
Optimization of deep learning model for coastal chlorophyll a dynamic forecast	8
The increasing contribution of greening to the terrestrial evapotranspiration in China	8
Simulation of forest carbon fluxes by integrating remote sensing data into biome-BGC model	8
Background selection complexity influences Maxent predictive performance in freshwater systems	8
Simulations and interpretations of cumulative trophic theory	8
How sustainable development goals have transformed our world? Evolution of the ecological networks of the Italian economy	8
Quantifying the per-capita contribution of all components of a migratory cycle: A modelling framework	8
Improved simulation of plant-animal interactions in African savannas with the extended land use change model LUCIA	8
Modelling managed forest ecosystems in Sweden: An evaluation from the stand to the regional scale	8
Keeping up with the math: Advancing the ecological foundation of the Great Lakes Cladophora Model	7
Retraction note to “Exploring and forecasting spatial and temporal patterns of fire hazard risk in Nepal's tiger conservation zones” [Ecological Modelling 476 (2023) 1–12/110244]	7
Integrating the temperature vegetation dryness index and meteorology parameters to dynamically predict crop yield with fixed date intervals using an integral regression model	7
Simulating the effects of aquatic avifauna on the Phosphorus dynamics of aquatic systems	7
Phytomass productivity of cutting and grazing grasslands with special reference to small-scale spatial variation in plant nutrient resources	7
Editorial Board	7
“Teaching ‘Process Ecology’ at the Undergraduate Level: A Curricular Response to a Latent Yearning for an Ecologically-Based Understanding of Transdisciplinary Realities”	7
Development and application of a bioenergetics growth model for multiple early life stages of an ecologically important marine fish	7
Estimation of lake-scale stock-recruitment models for Great Lakes sea lampreys	7
Functional responses in habitat selection as a management tool to evaluate agri-environment schemes for farmland birds	7
Population modelling for pest management: A case study using a pest land snail and its fly parasitoid in Australia	7
Modelling spatially autocorrelated detection probabilities in spatial capture-recapture using random effects	7
Integrating equity and justice in marine ecosystem models: An incremental but meaningful approach	7
Indirect effects of pine marten recovery result in benefits to native prey through suppression of an invasive species and a shared pathogen	7
Uncertainties in future ecosystem services under land and climate scenarios: The case of erosion in the Alps	7
Predicting future patterns, processes, and their interactions: Benchmark calibration and validation procedures for forest landscape models	7
A conceptual modelling framework for simulating the impact of soil degradation on maize yield in data-sparse regions of the tropics	7
Warm Thanks to Dr. Brian D. Fath	7
Editorial Board	7
Data-driven agent-based model building for animal movement through Exploratory Data Analysis	7
Land suitability assessment and self-sufficiency evaluation for fodder crop production in a hyper arid environment coupling GIS-based multi-criteria decision making and optimization	7
Modelling interactive effects of biological and environmental factors on fine-scale coral settlement patterns	7
Corrigendum to ‘Agent-based modelling of juvenile eel migration via selective tidal stream transport’ [Ecological Modelling 443 (2021) 109448]	7
Evolution of the concept of ecological integrity and its study through networks	7
Comparison of comprehensive performance of kiwifruit production in China, Iran, and Italy based on emergy and carbon emissions	7
The impact of aquatic habitats on the malaria parasite transmission: A view from an agent-based model	7
Inferring the relative importance of navigation and landscape effects for migratory populations using agent-based models	7
Editorial Board	7
Information sharing promotes bacterial diversity in oligotrophic environment with low-dose X-ray radiation based on modeling and simulation of agent-based model	7
Editorial Board	7
Separating acoustic signal into underlying behaviors with self-exciting point process models	7
The performance of 3-PG model in Chinese fir plantations with different initial densities in southern China	7
Growing at the edge: Modelling sapling colonization, performance, and effective range of mountain birch (Betula pubescens ssp. tortuosa)	7
A generically parameterized model of Lake eutrophication: The impact of Stoichiometric ratios and constraints on the abundance of natural phytoplankton communities (GPLake-S)	7
Mechanistic simulations of kelp populations in a dynamic landscape of light, temperature, and winter storms	6
Improving the representation of smallholder farmers’ adaptive behaviour in agent-based models: Learning-by-doing and social learning	6
Analytical model for pullout behavior of root system	6
A high resolution hydrodynamic-biogeochemical-oyster-filtration model predicts that the presence of oysters (Crassostrea virginica) can improve, or reduce, water quality depending upon oyster abundanc	6
Incorporating biodiversity impacts in land use decisions	6
Ways to reduce or avoid juvenile-driven cycles in individual-based population models	6
Exploring nonstationary limiting factors in species habitat relationships	6
Assessing the efficiency of bird habitat conservation strategies in farmland ecosystems	6
Elucidating the seasonal dominance replacement mechanism of harmful raphidophytes Chattonella marina and Heterosigma akashiwo using the Lotka–Volterra model	6
Burning trees in frozen soil: Simulating fire, vegetation, soil, and hydrology in the boreal forests of Alaska	6
How to be a successful shrub in northwestern Patagonia grasslands: Population dynamics of Senecio bracteolatus in a fire prone ecosystem	6
Socio-econ-ecosystem multipurpose simulator (SEEMS): An easy-to-apply agent-based model for simulating small-scale coupled human and nature systems in biological conservation hotspots	6
Comprehensive evaluation of urban greenspace ecological values marketability through the spatial relationship between housing price and ecosystem services	6