Journal of Biomolecular Structure & Dynamics

Papers
(The TQCC of Journal of Biomolecular Structure & Dynamics is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)
ArticleCitations
Comparative anti-Diabetic potential of phytocompounds from Dr. Duke's phytochemical and ethnobotanical database and standard antidiabetic drugs against diabetes hyperglycemic target proteins: an 76
Synthesis, structural, characterization, antibacterial and antibiotic modifying activity, ADMET study, molecular docking and dynamics of chalcone ( E )-1-(4-aminophenyl)72
In vitro and in silico binding studies of phytochemical isochroman with calf thymus DNA using multi-spectroscopic and computational modelling techniques72
Self-assembly of soybean peroxidase nanohybrid for activity enhancement and dye decolorization: experimental and computational studies59
Comparative molecular docking analysis for analyzing the inhibitory effect of Anakinra and Ustekinumab against IL17F52
Parallel actin monomers in the 8S complex of actin–INF251
In-silico discovery of inhibitors against human papillomavirus E1 protein49
Unearthing the inhibitory potential of phytochemicals from Lawsonia inermis L. and some drugs against dengue virus protein NS1: an in silico 47
Molecular docking, molecular dynamics simulation, and MM/PBSA analysis of ginger phytocompounds as a potential inhibitor of AcrB for treating multidrug-resistant Klebsiella pneumoniae45
Multistage in silico approach to identify novel quinoline derivatives as potential c-kit kinase inhibitors42
Genetic variants and haplotype structures of miRNA host genes in cancer and obesity41
An energy-aware heart disease prediction system using ESMO and optimal deep learning model for healthcare monitoring in IoT40
XRD/DFT, Hirshfeld surface analysis and molecular modelling simulations for unfolding reactivity of newly synthesized vanillin derivatives: excellent optical, NLO and protein binding efficiency39
Unveiling fructose and glucose binding to human serum albumin: fluorescence measurements and docking, molecular dynamics and quantum biochemistry computations39
Deep learning-based design and screening of benzimidazole-pyrazine derivatives as adenosine A 2B receptor antagonists38
Investigating the role of functional mutations in leucine binding to Sestrin2 in aging and age-associated degenerative pathologies using structural and molecular simulation approaches37
Immunoinformatics-driven approach for development of potential multi-epitope vaccine against the secreted protein FlaC of Campylobacter jejuni37
MERS virus spike protein HTL-epitopes selection and multi-epitope vaccine design using computational biology36
In silico approaches to develop new phenyl-pyrimidines as glycogen synthase kinase 3 (GSK-3) inhibitors with halogen-bonding capabilities: 3D-QSAR CoMFA/CoMSIA, molecular docking and molecular dynamic36
Synthesis, crystal structure, cytotoxicity, in-detail experimental and computational CT-DNA interaction studies of 2-picolinate Pd(II) and Pt(II) complexes33
Integrative transcriptome analysis of triple negative breast cancer profiles for identification of druggable targets33
Phycocyanobilin is a new binding partner of human alpha-2-macroglobulin that protects the protein against oxidative stress33
A ‘deep dive’ into the SARS-Cov-2 polymerase assembly: identifying novel allosteric sites and analyzing the hydrogen bond networks and correlated dynamics33
In silico identification of Corylifol C as a potential natural inhibitor of BfrB-Bfd interaction in Pseudomonas aeruginosa32
Therapeutic efficacy of α-lactalbumin coated oleic acid based liposomes against colorectal carcinoma in Caco-2 cells and DMH-treated albino rats32
The potential of some functional group compounds substituted 8-Manzamine A as RSK1 inhibitors: molecular docking and molecular dynamics simulations32
Solvent-mediated dynamics of diphtheria toxin and NAD interaction32
Computational investigations into structure and function impact of novel mutations identified in targeted exons from ovarian cancer cell lines32
Computational investigation on the conformational dynamics of C-terminal truncated α-synuclein bound to membrane31
Comparative analysis of ACE2 mutations and their impact on SARS-CoV-2 susceptibility within diverse ethnic groups31
Structural basis of multi-target interactions of Henna Dye Lawsone: an experimental and theoretical evaluation29
Barosmin against postprandial hyperglycemia: outputs from computational prediction to functional responses in vitro28
Spectroscopic, molecular docking and dynamic simulation studies of binding between the new anticancer agent olmutinib and human serum albumin28
Discovery of potential phytochemicals as inhibitors of TcdB, a major virulence factors of Clostridioides difficile28
Prediction of novel and potent inhibitors of lanosterol 14-α demethylase27
Effect of local anesthetic drug procaine hydrochloride on the conformational stability of bovine hemoglobin: Multi-spectroscopic and computational approaches27
Preparation of nanoformulation of 5-fluorouracil to improve anticancer efficacy: integrated spectroscopic, docking, and MD simulation approaches27
Computational discovery of small drug-like compounds as potential inhibitors of PD-1/PD-L1 interactions26
Antimalarial potential, LC–MS secondary metabolite profiling and computational studies of Zingiber officinale26
Insight into crystal structures and identification of potential styrylthieno[2,3- b ]pyridine-2-carboxamidederivatives against COVID-19 Mpro through structure-guided mod26
Identification of Zika virus NS2B-NS3 protease and NS5 polymerase inhibitors by structure-based virtual screening of FDA-approved drugs26
Association study of leptin receptor polymorphisms in women with obesity and their impact on protein domains: a case-control study and in silico analyses25
Discovery of anti-colon cancer agents targeting wild-type and mutant p53 using computer-aided drug design25
Efficient proton shuttle makes SazCA an excellent CO2 hydration enzyme24
Spectrin: an alternate target for cytoskeletal drugs24
Permeation selectivity of pristine and vacancy defected hexagonal boron membranes for alkaline earth metal and ions24
Targeting EGFR, RSK1, RAF1, PARP2 and LIN28B for several cancer type therapies with newly synthesized pyrazole derivatives via a computational study24
Can virus–virus interactions impact the dynamics of the covid-19 pandemic?24
Interactions between β-cyclodextrin as a carrier for anti-cancer drug delivery: a molecular dynamics simulation study24
Pharmacological assessment of Ru(II) complex with GidA protein- A novel topoisomerase II inhibitor towards cancer therapeutics23
Computational and SAXS-based structure insights of pectin acetyl esterase (CtPae12B) of family 12 carbohydrate esterase fromClostridium thermocellumATCC 2740523
Ligand pathways in estrogen-related receptors23
Artificial intelligence based virtual screening study for competitive and allosteric inhibitors of the SARS-CoV-2 main protease23
Anchoring of Amyloid-β onto Polyunsaturated Phospholipid Membranes23
Flap sub-domain dynamics of serine-threonine phosphatase (Stp1) of Staphylococcus aureus: an accelerated molecular dynamics simulation study23
Identification of second generation benzylidene chromanone analogues as novel, potent DHODH inhibitors in acute myeloid leukemia cells22
Comprehensive screening of marine metabolites against class B1 metallo-β-lactamases of Klebsiella pneumoniae using two-pronged in silico a22
Interdisciplinaryin silicostudies to understand in-depth molecular level mechanism of drug resistance involving NS3-4A protease of HCV22
A study of possible substitutes for the endocrine disruptor DEHP in two hormone receptors22
Evidence for a high pKaof an aspartic acid residue in the active site of CALB by a fully atomistic multiscale approach22
Phytochemicals from African eggplants (Solanum macrocarponL) and Black nightshade (Solanum nigrumL) leaves as acetylcholinesterase inhibitors: anin-silicostudy22
Bioflavonoids ameliorate crowding induced hemoglobin aggregation: a spectroscopic and molecular docking approach22
Identification of SARS-CoV-2 main protease inhibitors from FDA-approved drugs by artificial intelligence-supported activity prediction system21
Exploring the possibility of drug repurposing for cancer therapy targeting human lactate dehydrogenase A: a computational approach21
Structural and accessibility studies highlight the differential binding of clemizole to TRPC5 and TRPC621
Synthesis, crystallographic, DNA binding, and molecular docking/dynamic studies of a privileged chalcone-sulfonamide hybrid scaffold as a promising anticancer agent21
Molecular modelling and in vitro studies ofDaruharidraas a potent alpha-amylase inhibitor21
Colchicine as potential inhibitor targeting MMP-9, NOX2 and TGF-β1 in myocardial infarction: a combination of docking and molecular dynamic simulation study20
Identification of potential Staphylococcus aureus dihydrofolate reductase inhibitors using QSAR, molecular docking, dynamics simulations and free energy calculation20
Virtual screening and molecular dynamics simulation study of abyssomicins as potential inhibitors of COVID‐19 virus main protease and spike protein20
Docking and molecular dynamics studies of potential new leads against DBL3x derived from chondroitin sulfate A (CSA): a new approach for the treatment of malaria20
An insight into the binding and inhibition of eye ζ-crystallin by the environmental toxin arsenic: implications in eye diseases20
A review of synthetic strategy, SAR, docking, simulation studies, and mechanism of action of isoxazole derivatives as anticancer agents20
Computational identification of a multi-peptide vaccine candidate in E2 glycoprotein against diverse Hepatitis C virus genotypes19
Antinociceptive, anti-inflammatory and hypoglycemic activities of the ethanolicTurnera subulataSm. flower extract in adult zebrafish (Danio rerio)19
Virtual screening of quinoline derived library for SARS-COV-2 targeting viral entry and replication19
Switchable tetraplex elements in the heterogeneous nuclear ribonucleoprotein K promoter: micro-environment dictated structural transitions of G/C rich elements19
Bioactive plantaricins as potent anti-cancer drug candidates: double docking, molecular dynamics simulation and in vitro cytotoxicity analysis19
Insight into intermolecular binding mechanism of apatinib mesylate and human alpha-1-acid glycoprotein: combined multi-spectroscopic approaches with in silico19
In silico integrative analysis for the characterization of LYT1 a unique protein of Trypanosoma cruzi19
Synthesis, virtual screening and computational approach of a quinoxaline derivative as potent anti-HIV agent targeting the reverse transcriptase enzyme19
Structure-guided identification of potent inhibitors of ROS1 kinase for therapeutic development against non-small cell lung cancer19
Modelling of AgrA inhibitors to combat anti-microbial resistance in Staphylococcus aureus19
Biological and molecular approaches of the degradation or decolorization potential of the hypersaline Lake Tuz Bacillus megaterium H2 isolate18
An immuno-informatics approach for annotation of hypothetical proteins and multi-epitope vaccine designed against the Mpox virus18
Visualizing how inclusion of higher reciprocal space in SWAXS data analysis improves shape restoration of biomolecules: case of lysozyme18
2D-QSAR, molecular docking and MD simulation based virtual screening of the herbal molecules against Alzheimer’s disorder: an approach to predict CNS activity18
Drug repositioning to propose alternative modulators for glucocorticoid receptor through structure-based virtual screening18
Distribution of simple sequence repeats, transcription factors, and differentially expressed genes in the NGS-based transcriptome of male and female seabuckthorn ( Hippophae salicifolia18
Novel bioengineered MBenes for the treatment of Alzheimer's disease: An in-Sillico study18
Diterpenoid and C20 diterpenoid alkaloid as a potent inhibitor of SARS-CoV-2 main protease (M pro ): from Piper barberi Gamble, an end18
Accelerating the discovery of the beyond rule of five compounds that have high affinities toward SARS-CoV-2 spike RBD18
On the inhibition of cytochrome P450 3A4 by structurally diversified flavonoids18
An in-silico investigation based on molecular simulations of novel and potential brain-penetrant GluN2B NMDA receptor antagonists as anti-stroke therapeutic agents18
Analysing the genetic code degeneracy: a consequence towards bacterial staining17
Calculation of binding affinity of JAK1 inhibitors via accurately computational estimation17
Identification of potential human beta-secretase 1 inhibitors by hierarchical virtual screening and molecular dynamics17
Structural, spectroscopic, molecular docking, ADME, molecular dynamics studies of Val-Trp dipeptide17
Phylogeny and evolution of SARS-CoV-2 during Delta and Omicron variant waves in India17
Design, synthesis, in vitro and in silico bioactivity profiles of new urea/thiourea derivatives of 2-pyridyl piperazine as potent antioxidant and antimicrobial agents: chemo-bio-computat17
Probing the interaction between niobium pentoxide nanoparticles and serum albumin proteins by Spectroscopic approaches17
A comparative study on DNA and protein binding properties of thymol and thymoquinone17
Correction17
A comprehensive examination of ACE2 receptor and prediction of spike glycoprotein and ACE2 interaction based on in silico analysis of ACE2 receptor17
Phytocompounds screening of Nigella sativa in terms of human cancer by targeting sphingosine kinase-1 and pyruvate kinase-M2: a study based on in silico17
In silico analysis of substitution mutations in the β-globin gene in Turkish population of β-thalassemia17
Repurposing integrase inhibitors against human T-lymphotropic virus type-1: a computational approach17
Discovering potential inhibitors of Raf proto-oncogene serine/threonine kinase 1: a virtual screening approach towards anticancer drug development17
Design of a novel multi-epitope vaccine candidate against Chlamydia trachomatis using structural and nonstructural proteins: an immunoinformatics study17
Molecular dynamic simulation reveals spider antimicrobial peptide Latarcin-1 and human eosinophil cationic protein as peptide inhibitors of SARS-CoV-2 variants17
Accuracy and precision of binding free energy prediction for a tacrine related lead inhibitor of acetylcholinesterase with an arsenal of supercomputerized molecular modelling methods: a comparative st17
Identification of defactinib derivatives targeting focal adhesion kinase using ensemble docking, molecular dynamics simulations and binding free energy calculations17
Computational analysis of structural and functional evaluation of the deleterious missense variants in the human CTLA4 gene17
Medicinal plant compounds as promising inhibitors of coronavirus (COVID-19) main protease: anin silicostudy16
Intercalative binding of two new five-coordinated anticancer Pt(II) complexes to DNA: experimental and computational approaches16
Identification of small molecule inhibitors of RAD52 for breast cancer therapy: in silico approach16
Molecular insights into MYO3A kinase domain variants explain variability in both severity and progression of DFNB30 hearing impairment16
Structure-based drug discovery and antimicrobial activity of ciprofloxacin‐grafted Ugi adducts16
Structure-based identification of potential natural compound inhibitors targeting bacterial cytoskeleton protein FtsZ from Acinetobacter baumannii by computational studi16
Neem and Turmeric in the management of Covid Associated Mucormycosis (CAM) derived through network pharmacology16
Crystal structure determination, molecular docking and dynamics of arylidene cyanoacetates as potential JNK-3 inhibitors for Ischemia reperfusion injury16
Designing Self-Inhibitory fusion peptide analogous to viral spike protein against novel severe acute respiratory syndrome (SARS-CoV-2)16
Quantitative structure-activity relationships, molecular docking and molecular dynamics simulations reveal drug repurposing candidates as potent SARS-CoV-2 main protease inhibitors16
Drug repurposing against the RNA-dependent RNA polymerase domain of dengue serotype 3 by virtual screening and molecular dynamics simulations16
In silico approach to target PI3K/Akt/mTOR axis by selected Olea europaea phenols in PIK3CA mutant colorectal cancer16
Naphthoquinones biflorin and bis-biflorin ( Capraria biflora ) as possible inhibitors of the fungus Candida auris polymerase: molecular do16
Synthesis, in silico, and in vivo anti-inflammatory evaluation of 3β-cinnamoyloxy substituted pregna-4,16-diene-6,20-diones derivatives16
Interactions study of 1,2,4-triazole derivatives in acid medium using molecular dynamics15
In vitro and in silico inhibitory validation of Tapinanthus cordifolius leaf extract on alpha-glucosidase in the manage15
Signaling landscape of mitochondrial non-coding RNAs15
Delineation of the CENP-LN sub-complex dissociation mechanism upon multisite phosphorylation during mitosis15
Development of nanostructured lipid carriers as a promising tool for methotrexate delivery: physicochemical and in vitro evaluation15
High-resolution liquid chromatography and mass spectrometry (HR-LCMS) assisted phytochemical profiling and an assessment of anticancer activities of Gracilaria foliifera and Turbinaria conoi15
Experimental and theoretical evaluation of N-pyridoxal-salicylic acid hydrazide derived copper(II) complex with 2-methylimidazole15
Molecular docking and dynamic simulations of Ocimum basilicum compounds against HCC and structural, vibrational, quantum, and chemical investigation of campesterol15
PACAP key interactions with PAC1, VPAC1, and VPAC2 identified by molecular dynamics simulations15
The potential of phytochemicals against epidermal growth factor receptor tyrosine kinase (EGFRK): an insight from molecular dynamic simulations15
Discovering potential stabilizers for KRAS22RT G-quadruplex DNA: an alternative next generation approach to treat pancreatic cancer15
Computational modeling to understand the interaction of TMPyP4 with a G-quadruplex15
Base pairs with 5-chloroorotic acid and comparison with the natural nucleobase. Structural and spectroscopic study, and three suggested antiviral modified nucleosides14
In silicoandin vitrostudies on inhibitors for SARS-CoV-2 non-structural proteins with dual herbal combination ofWithania somniferawith five rasayana herbs14
Efficient DNA-ligand interaction framework using fuzzy C-means clustering based glowworm swarm optimization (FCMGSO) method14
Integrated molecular modeling and dynamics approaches revealed potential natural inhibitors of NF-κB transcription factor as breast cancer therapeutics14
Structural dynamics and functional analysis of Saprolegnia parasitica chitin synthases 5 in a phospholipid bilayer14
Identification of potent anti-fibrinolytic compounds against plasminogen and tissue-type plasminogen activator employing in silico approaches14
Structure-based drug design, molecular dynamics simulation, ADMET, and quantum chemical studies of some thiazolinones targeting influenza neuraminidase14
Allosteric inhibition of dengue virus RNA-dependent RNA polymerase by Litsea cubeba phytochemicals: a computational study14
Computational screening of pathogenic missense nsSNPs in heme oxygenase 1 (HMOX1) gene and their structural and functional consequences14
Cytochrome P450 2C19 gene polymorphisms (CYP2C19*2 and CYP2C19*3) in chronic myeloid leukemia patients: in vitro and in silico studies14
Repurposing phytochemicals of Citrullus colocynthis against maltase-glucoamylase using molecular docking, MMGBSA, MD simulation and linear regression to identify potenti14
Determining similarities of COVID-19 – lung cancer drugs and affinity binding mode analysis by graph neural network-based GEFA method14
Identification of potential inhibitor against CTX-M-3 and CTX-M-15 proteins: an in silico and in vitro study14
Targeting the omicron variant of SARS-CoV-2 with phytochemicals from Saudi medicinal plants: molecular docking combined with molecular dynamics investigations14
Identification of essential oil phytocompounds as natural inhibitors of Odorant-binding protein to prevent malaria throughin silicoapproach14
Identification of potential Escherichia coli DNA gyrase B inhibitors targeting antibacterial therapy: an integrated docking and molecular dynamics simulation study14
Investigating anti-inflammatory actions of marine algal compound against lipoxygenase concentrating on therapeutic applications through computational approach14
Dual targeting in prostate cancer with phytoconstituents as a potent lead: a computational approach for novel drug discovery14
Sesame oil ameliorates valproic acid-induced hepatotoxicity in mice: integrated in vivo–in silico study14
Development of novel chromones as antioxidant COX2 inhibitors: in vitro , QSAR, DFT, molecular docking, and molecular dynamics studies14
Synergistic antimicrobial activity, MD simulation studies and crystal structure of natural alcohol motif containing novel substituted cinnamates14
Synthesis of indole derivatives as Alzheimer inhibitors and their molecular docking study14
Interactions between phenolic constituents of Scutellaria salviifolia and key targets associated with inflammation: network pharmacology, molecular docking analysis and in vitro assays14
In-silico evidences on filarial cystatin as a putative ligand of human TLR413
Effect of glycation-induced concentration-dependent change in albumin structure and alteration in its binding capacity13
Structure-based molecular docking and molecular dynamics simulations study for the identification of dipeptidyl peptidase 4 inhibitors in type 2 diabetes13
High-throughput screening and in vitro evaluation of CSB-0914; a novel small molecule NF-κB inhibitor attenuating inflammatory responses through NF-κB, Nrf2 and HO-1 cro13
Investigation of the impact of R273H and R273C mutations on the DNA binding domain of P53 protein through molecular dynamic simulation13
Unveiling the potential of recently FDA-approved drugs as quorum sensing inhibitors against P. Aeruginosa using high-performance computational techniques13
Albumin from sera of rheumatoid arthritis patients share multiple biochemical, biophysical and immunological properties with in vitro generated glyco-nitro-oxidized-albu13
Development of a novel apigenin prodrug programmed for alkaline-phosphatase instructed self-inhibition to combat cancer13
Cameroonian medicinal plants as potential candidates of SARS-CoV-2 inhibitors13
Identification of new small molecule allosteric SHP2 inhibitor through pharmacophore-based virtual screening, molecular docking, molecular dynamics simulation studies, synthesis and in 13
Crystallographic mining driven computer-guided approach to identify the ASK1 inhibitor likely to perturb the catalytic region13
Targeting CDK6 in hormone receptor-positive breast cancer: inhibitor discovery for precision oncology through dynamics study13
Molecular dynamics simulations of the SARS-CoV-2 Spike protein and variants of concern: structural evidence for convergent adaptive evolution13
Phytocompounds from Phyllanthus acidus (L.) Skeels in the management of Monkeypox Virus infections13
STAT5 inhibitor Pimozide as a probable therapeutic option in overcoming Ponatinib resistance in K562 leukemic cells13
Elaborated pseudoknots that stimulate −1 programmed ribosomal frameshifting or stop codon readthrough in RNA viruses13
Development of 1,3-diynyl derivatives of noscapine as potent tubulin binding anticancer agents for the management of breast cancer13
Harnessing allosteric inhibition: prioritizing LIMK2 inhibitors for targeted cancer therapy through pharmacophore-based virtual screening and essential molecular dynamics13
Molecular insights to the anti-COVID-19 potential of α-, β- and γ-cyclodextrins13
Identification of potential inhibitors targeting Ebola virus VP35 protein: a computational strategy13
Molecular dynamics simulations assisted investigation of phytochemicals as potential lead candidates against anti-apoptotic Bcl-B protein13
Druggable sites identification in Streptococcus mutans VicRK system evaluated by catechols13
Network pharmacology and molecular docking to study the potential molecular mechanism of Qi Fu Yin for diabetic encephalopathy13
In silico studies disclose the underlying link between binding affinity and redox potential in laccase isoforms13
In silico analysis of identified molecules using LC–HR/MS of Cupressus sempervirens L. ethyl acetate fraction against three monkeypox virus targets12
Aggregation and cytotoxicity of food additive dye (Azorubine)-albumin adducts: a multi-spectroscopic, microscopic and computational analysis12
Optimized structure of monoubiquitinated FANCD2 (human) at Lys 561: a theoretical approach12
A network pharmacology- and molecular dynamics simulation-based bioprospection of Khaya grandifoliola C. DC. for diabetes care12
Computational approaches for evaluation of isobavachin as potential inhibitor against t877a and w741l mutations in prostate cancer12
Pharmacoinformatics-based identification of phytochemicals from Solanum torvum Swartz. fruits as potential inhibitors for MAPK14 protein12
Design of a multi-epitope Zika virus vaccine candidate – an in-silico study12
Temperature-dependent hydration behavior of aqueous lysine: an approach towards protein binding through dielectric spectroscopy12
Structural modeling and analyses of genetic variations in the human XPC nucleotide excision repair protein12
Mechanism of electron transfers mediated by cytochromes c and b5 in mitochondria and endoplasmic reticulum: classical and murburn perspectives12
Solution structure of the N-terminal extension domain of a Schistosoma japonicum asparaginyl-tRNA synthetase12
Assessment of inhibitory potentiality of natural compounds against worrisome rice blast fungus12
Network pharmacology analysis of Plumbago zeylanica to identify the therapeutic targets and molecular mechanisms involved in ameliorating hemorrhoids12
Exploring imidazo[4,5- g ]quinoline-4,9-dione derivatives as Acinetobacter baumannii efflux pump inhibitor: an in silico12
Deciphering the conformational stability of MazE7 antitoxin in Mycobacterium tuberculosis from molecular dynamics simulation study12
Structural and thermostability insights into cellobiohydrolase of a thermophilic mould Myceliophthora thermophila: in-silico studies12
Can de-phosphorylation of serine-5 in the C-terminal domain of human polymerase II affect its interaction with the PA C-terminal domain of bat Flu A polymerase?12
Developing a comprehensive solution aimed to disrupt LARS1/RagD protein-protein interaction12
Acalabrutinib as a novel hope for the treatment of breast and lung cancer: an in-silico proof of concept12
Halogen substituted aurones as potential apoptotic agents: synthesis, anticancer evaluation, molecular docking, ADMET and DFT study12
Seasonal variation of the composition of essential oils fromPiper cernuumVell andPiper rivinoidesKunth, ADMET study, DFT calculations, molecular docking and dynamics studies of major com12
Complete reconstruction of dasatinib unbinding pathway from c-Src kinase by supervised molecular dynamics simulation method; assessing efficiency and trustworthiness of the method12
In vitroandin silicogrowth inhibitory, anti-ovarian & anti-lung carcinoma effects of 1,5 diarylpenta-1,4-dien-3-one as synthetically modified curcumin analogue12
Validating the predictions of murburn model for oxygenic photosynthesis: Analyses of ligand-binding to protein complexes and cross-system comparisons12
Comprehensive mapping of mutations in TDP-43 and α-Synuclein that affect stability and binding12
Inhibition of respiratory syncytial virus by Daclatasvir and its derivatives: synthesis of computational derivatives as a new drug development12
Antimicrobial activity prediction, inter- and intramolecular charge transfer investigation, reactivity analysis and molecular docking studies of adenine derivatives12
Evaluation of wound healing active principles in the transdermal patch formulated with crude bio wastes and plant extracts against GSK-3 beta - an in sili12
Nanotechnology for controlling mango malformation: a promising approach12
Physiological models to study the effect of molecular crowding on multi-drug bound proteins: insights from SARS-CoV-2 main protease12
Repurposing antibiotics as potent multi-drug candidates for SARS-CoV-2 delta and omicron variants: molecular docking and dynamics12
Evaluating chemotherapeutic potential of soya-isoflavonoids against high penetrance genes in triple-negative breast cancer12
RNA-binding domain of SARS-CoV2 nucleocapsid: MD simulation study of the effect of the proline substitutions P67S and P80R on the structure of the protein12
Identification of novel human nicotinamide N-methyltransferase inhibitors: a structure-based pharmacophore modeling and molecular dynamics approach12
Lead optimization, pharmacophore development and scaffold design of protein kinase CK2 inhibitors as potential COVID-19 therapeutics12
Identification of potentially high drug-like VEGFR2/c-Met dual-target type II kinase inhibitors with symmetric skeletons based on structural screening12
GC–MS screening of the phytochemical composition of Ziziphus honey: ADME properties and in vitro / in silico study of its antimicrobial ac12
Bioprospecting of Meliaceae family phytomolecules for the treatment of monkeypox virus infection: a QSAR modeling and MD simulation approach12
Investigation of a set of flavonoid compounds as Helicobacter pylori urease inhibitors: insights from in silico studies12
Revealing therapeutic targets and drugs from Chinese medicine for ulcerative colitis using bioinformatics11
High-throughput virtual screening of phenylpyrimidine derivatives as selective JAK3 antagonists using computational methods11
Combined study of docking and molecular dynamics against DNV-3 SN1 protein by bixinoids11
Structural and functional characterization of RNA dependent RNA polymerase of Macrobrachium rosenbergii nodavirus (MnRdRp)11
Virtual discovery of a hetero-cyclic compound from the Universal Natural Product Database (UNPD36) as a potential inhibitor of interleukin-33: molecular docking and dynamic simulations11
pH induced structural and conformational changes in nucleocapsid protein leads to intermediate like conformation: a biophysical and computational approach11
In silico screening of dicoumarols as potential Mur B enzyme inhibitors in Mycobacterium tuberculosis : molecular docki11
Evaluation of apigenin-based biflavonoid derivatives as potential therapeutic agents against viral protease (3CLpro) of SARS-CoV-2 via molecular docking, molecular dynamics and quantum mechanics studi11
Trailblazing real-world-data to confront hepatocellular carcinoma – disinterring repurposable drugs by amalgamating avant-garde stratagems11
Explanatory review on pyrimidine/fused pyrimidine derivatives as anticancer agents targeting Src kinase11
New tamoxifen analogs for breast cancer therapy: synthesis, aromatase inhibition and in silico studies11
Building polarization into protein-inhibitor binding dynamics in rational drug design for rheumatoid arthritis11
In silico studies of alkaloids and their derivatives against N-acetyltransferase EIS protein from Mycobacterium tuberculosis11
In-silico identification of potential peptide inhibitors to disrupt NLRP3 inflammasome complex formation by blocking NLRP3-ASC pyrin-pyrin interactions11
Design, dynamic docking, synthesis, and in vitro validation of a novel DNA gyrase B inhibitor11
Virtual screening of gut microbiome bacteriocins as potential inhibitors of stearoyl-CoA desaturase 1 to regulate adipocyte differentiation and thermogenesis to combat obesity11
Inhibiting brushite crystal growth: molecular docking exploration of Enhydra fluctuans phytoconstituents and their interaction with human serum albumin11
A staphylococcal capsule-producing enzyme that unfolds via multiple intermediates predominantly exists as the trimers at low concentrations11
Umbelliferone modulates the quorum sensing and biofilm of Gram − ve bacteria: in vitro and in silico investigations11
Identification of phytochemicals from Eclipta alba and assess their potentiality against Hepatitis C virus envelope glycoprotein: virtual screening, docking, and molecular dynamics simulation s11
Drug repositioning against COVID-19: a first line treatment11
Identification and exploration of quinazoline-1,2,3-triazole inhibitors targeting EGFR in lung cancer11
The role of Colchicine on actin polymerization dynamics: as a potent anti-angiogenic factor11
Design, synthesis and biological evaluation of novel antipyrine based α-aminophosphonates as anti-Alzheimer and anti-inflammatory agent11
Monitoring the interactions between bovine serum albumin and ZnO/Ag nanoparticles by spectroscopic techniques11
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