OOIR: Observatory of International Research

Papers

(The median citation count of Genome is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)

Article	Citations
Patterns of stability and change in the maize genome: a case study of small RNA transcriptomes in two recombinant inbred lines and their progenitors	283
Authentication of garlic (Allium sativum L.) supplements using a trnL^UAA mini-barcode	57
Sequence-based identification of polyamine oxidase genes in Sorghum bicolor L.	47
Chromosomal and molecular perspectives on Potamotrygon motoro (Müller & Henle, 1841) from central Amazon	43
Correction: Barcoding lichen-forming fungi using 454 pyrosequencing is challenged by artifactual and biological sequence variation	40
Complete chloroplast genome sequencing and comparative analysis reveals changes to the chloroplast genome after allopolyploidization in Cucumis	22
Marsupial satellite DNA as faithful reflections of long-terminal repeat retroelement structure	19
Genomics and bioinformatics capacity in Africa: no continent is left behind	18
Fine mapping of a major QTL qPA7-1 for low hydrocyanic acid content in sorghum–sudangrass hybrid	17
Genome-wide investigation and expression analysis of the AP2/ERF family for selection of agarwood-related genes in Aquilaria sinensis (Lour.) Gilg	16
Karyotype Evolution of Suliformes and Description of a ♂Z1Z1Z2Z2/♀Z1Z2W Multiple Sex Chromosome System in boobies (Sula spp.)	15
Determination of reverse transcriptase inhibitor resistance mutations in HIV-1 infected children in Côte d’Ivoire	15
Molecular identification and DNA barcode screening of acaroid mites in ground flour dust	13
Genome-wide characterization of the PDI gene family in Medicago truncatula and their roles in response to endoplasmic reticulum stress	13
Genome-wide identification of bZIP transcription factor genes related to starch synthesis in barley (Hordeum vulgare L.)	12
Mitogenome evolution in Trichoderma afroharzianum strains: for a better understanding of distinguishing genus	12
An 82 bp tandem repeat family typical of 3′ non-coding end of Gypsy/TAT LTR retrotransposons is conserved in Coffea spp. pericentromeres	12
Note of appreciation	11
RESISTANCE GENES AGAINST YELLOW RUST PATHOGEN IN TRITICUM SPELTA: A POSSIBLE NEW Yr RESISTANCE GENE IN ACCESSION IARI276 AND Yr5 PRESENCE CONFIRMED IN PI348764	10
Using telomeric length measurements and methylation to understand the karyotype diversification of Ctenomys minutus (a small fossorial mammal)	10
Primate-specific histone variants	10
Fragments derived from non-coding RNAs: how complex is genome regulation?	10
Chromosome painting reveals the genomic structure of three polyploid species of Ipomoea	9
Structure and genetic diversity of Canadian Maritimes wild hops	9
In-vitro anti-fungal assay and association analysis reveal a role for the Pinus monticola PR10 gene (PmPR10-3.1) in quantitative disease resistance to white pine blister rust	9

Identification of full-length genes involved in the biosynthesis of β-caryophyllene and lupeol from the leaf transcriptome of Ayapana triplinervis	8
Reflections on the organization and the physical state of chromatin in eukaryotic cells	8
Genome organization of major tandem repeats and their specificity for heterochromatin of macro- and microchromosomes in Japanese quail	8
Asp/ASPM phospho-regulation throughout the cell cycle	8
Comparative analysis reveals chromosome number reductions in the evolution of African bermudagrass (Cynodon transvaalensisBurtt-Davy)	8
Clubroot in Brassica: recent advances in genomics, breeding, and disease management	8
The plastome of ArcticOxytropis arctobia(Fabaceae) is significantly different from that ofO. splendensand other related species	7
The complete chloroplast genome of Aristolochia fangchi provided insights into the phylogeny and species identification of Aristolochia	7
Autophagy in cell fate decisions: knowledge gained fromDrosophila	7
The chicken model organism for epigenomic research	6
Empowering canine genomics: design and validation of a high-density SNP array for Indian dogs	6
Genome Publication Awards 2021	6
Genetic diversity of Asian and European common wheat lines assessed by fluorescence in situ hybridization	6
Broad histone H4 monomethylation marks expressed genes involved in translation	6
DNA barcodes and new primers for nature’s pest controllers: the social wasps	6
Note of appreciation	5
Cytogenetic characterization and karyotype evolution in six Macroptilium species (Leguminosae)	5
SmFLS negatively regulates peel coloring of eggplant (Solanum melongena) under high temperature	5
Distinct patterns of satDNA distribution in holocentric chromosomes of spike-sedges (Eleocharis, Cyperaceae)	5
Use of species delimitation approaches to tackle the cryptic diversity of an assemblage of high Andean butterflies (Lepidoptera: Papilionoidea)	5
Whole-genome comparative analysis reveals genetic mechanisms of disease resistance and heat tolerance of tropicalBos indicuscattle breeds	5
Peroxisome inter-organelle cooperation in Drosophila	5
Proteomic and lipidomics analyses of high fatty acid AhDGAT3 transgenic soybean reveals the key lipase gene associated with the lipid internal mechanism	5
The repetitive DNA landscape in the ‘brizantha’ agamic complex of Urochloa P. Beauv.	5
Molecular analysis of nematode-responsive defence genes CRF1, WRKY45, and PR7 in Solanum lycopersicum tissues during the infection of plant-parasitic nematode species of th	5
Gynogenetic diploids, tetraploids, or octoploids, and a path to polyploidy in anuran amphibians	5
Transcriptional enhancers: from prediction to functional assessment on a genome-wide scale	5
Insights on mauritiana-like elements diversity in Mayetiola destructor and M. hordei (Diptera: Cecidomyiidae)	5
Comparative satellite DNA mapping in species of the genus Prochilodus (Teleostei, Characiformes) and its evolutionary implications	5
AVITI as an alternative to Illumina for low-cost genome-wide genotyping	5
Assessing population genetic structure of three New Zealand stream insects using mitochondrial and nuclear DNA markers	4
Abundance of distal repetitive DNA sequences in Capsicum L. (Solanaceae) chromosomes	4
Development and application of whole-chromosome painting of chromosomes 7A and 8A of Arachis duranensis based on chromosome-specific single-copy oligonucleotides	4
Characterization and expression of the Pirin gene family in Triticum aestivum	4
Gut microbiome-mediated epigenetic regulation of brain disorder and application of machine learning for multi-omics data analysis	4
Stabilizing selection and mitochondrial heteroplasmy in the Canada lynx (Lynx canadensis)	4
Genomic regions associated with resistance to Fusarium wilt in castor identified through linkage and association mapping approaches	4
Zebrafish optineurin: genomic organization and transcription regulation	4
Linking the spatial and genomic structure of adaptive potential for conservation management: a review	4
Comparative plastomes of species from Phrymaceae and Mazaceae: insights into adaptive evolution, codon usage bias, and phylogenetic relationships	4
Uncovering the complexity of structural variants in four individuals with autism spectrum disorder	3
An endogenous retrovirus presumed to have been endogenized or relocated recently in a marsupial, the red-necked wallaby	3
The genetics ofCannabis—genomic variations of key synthases and their effect on cannabinoid content	3
Environmental drivers behind the genetic differentiation in mountain chickadees (Poecile gambeli)	3
Half-chromatid mutation as a possible cause of mosaic males and females in Hymenoptera and rare fertile male tortoiseshell cats	3
DNA barcoding of southern African mammal species and construction of a reference library for forensic application	3
Assessing the accuracy of imputation in the Gyr breed using different SNP panels	3
Frequency of cytosine methylation in the adjacent regions of soybean retrotransposon SORE-1 depends on chromosomal location	3
Molecular characterization of a novel mutation in the E1 flowering gene induced by gamma irradiation in soybean	3
Rapid karyotypic evolution with high diploid number variation in a rare genus of bromeligenous frogs	3

Cannabis, the multibillion dollar plant that no genebank wanted	3
Diversity and antigenic potentials of Mycoplasmopsis bovis secreted and outer membrane proteins within a core genome of strains isolated from North American bison and cattle	3
Special issue on Genome Biology jointly published by Genome and Biochemistry and Cell Biology	3
Comparative analysis of transposable elements dynamics in fish with different sex chromosome systems	3
Satellitome analysis on Microtus thomasi (Arvicolinae) genome, a mammal species with high karyotype and sex chromosome variations	3
High-density linkage maps detail sex-specific regions of suppressed recombination near fusions of polymorphic chromosomes in purebred and hybrid North American Atlantic salmon (Salmo salar L.)	3
Origins and chromosome differentiation of Thinopyrum elongatum revealed by PepC and Pgk1 genes and ND-FISH	3
Reduced representation bisulfite sequencing (RRBS) analysis reveals variation in distribution and levels of DNA methylation in white birch (Betula papyrifera) exposed to nickel	3
Meta-analyses of the global multilocus genotypes of the human pathogen Campylobacter jejuni	3
Differential DNA methylation analysis reveals key genes in Chinese Qingyu and Landrace pigs	3
A phylogenetic perspective of chromosome evolution in Formicidae	2
Identification of lncRNAs in response to infection byPlasmodiophora brassicaeinBrassica napusand development of lncRNA-based SSR markers	2
Genes influencing deposition of melanin in breast muscle of the Xuefeng black bone chicken based on bioinformatic analysis	2
Transfer of fusarium head blight resistance from Thinopyrum elongatum to bread wheat cultivar Chinese Spring	2
Adjusting extracellular pH to prevent entry of SARS-CoV-2 into human cells	2
Whole genome sequencing and analysis of benzo(a)pyrene-degrading bacteria Bacillus cereus M72-4	2
Comparative analysis of Aegilops speltoides and wheat repetitive elements and development of S genome-specific FISH painting	2
The treatment of SARS-CoV2 with antivirals and mitigation of the cytokine storm syndrome: the role of gene expression	2
A species-specific digital PCR assay for the endangered blue racer (Coluber constrictor foxii) in Canada	2
Transcriptome profiling of differentially expressed genes of male and female inflorescences in spinach (Spinacia oleracea L.)	2
Analysis of the winter oilseed rape recombination landscape suggests maternal–paternal bias	2
miR-181a-5p is a potential candidate epigenetic biomarker in multiple sclerosis	2
Identification of novel candidate of brown planthopper resistance gene Bph44 in rice (Oryza sativa L.)	2
Comparative genomic and phylogenetic analysis of the complete mitochondrial genome of Cricula trifenestrata (Helfer) among lepidopteran insects	2
Genomics-based taxonomy to clarify cannabis classification	2
Expression of defensin genes across house fly (Musca domestica) life history gives insight into immune system subfunctionalization	2
Genomic prediction in Brassica napus: evaluating the benefit of imputed whole-genome sequencing data	2
Chromosome mapping of retrotransposon AviRTE in a neotropical bird species: Trogon surrucura (Trogoniformes; Trogonidae)	2
Identification of alternative splicing and RNA-binding proteins involved in myocardial ischemia–reperfusion injury	2
Mapping of quantitative trait loci (QTL) in Brassica napus L. for tolerance to water stress	2
Origin and evolution of highly polymorphic rDNA sites in Alstroemeria longistaminea (Alstroemeriaceae) and related species	2
Frequent numerical and structural chromosome changes in early generations of synthetic hexaploid wheat	2
The medaka fish Tol2 transposable element is in an early stage of decay: identification of a nonautonomous copy	2
Molecular characterization and functional analysis of the lysosomal cathepsin D-like gene in red swamp crayfish, Procambarus clarkii	2