OOIR: Observatory of International Research

Papers

(The median citation count of Genome is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-09-01 to 2025-09-01.)

Article	Citations
Marsupial satellite DNA as faithful reflections of long-terminal repeat retroelement structure	34
Asp/ASPM phospho-regulation throughout the cell cycle	20
Mitogenome evolution in Trichoderma afroharzianum strains: for a better understanding of distinguishing genus	19
Genome-wide identification of bZIP transcription factor genes related to starch synthesis in barley (Hordeum vulgare L.)	17
Genome Publication Awards 2021	13
Genetic diversity of Asian and European common wheat lines assessed by fluorescence in situ hybridization	13
Single-cross prediction with imputed multiomic data: a case study in rapeseed	12
Linking the spatial and genomic structure of adaptive potential for conservation management: a review	12
Transcriptome analysis of Brassica napus near-isogenic lines carrying clubroot resistance from turnip (B. rapa var. rapifera)	11
The plastome of ArcticOxytropis arctobia(Fabaceae) is significantly different from that ofO. splendensand other related species	11
Genome assembly, analysis, and mining of Kocuria flava NIO_001: a thiopeptide antibiotic synthesizing bacterium isolated from marine sponge	10
Comparative analysis of transposable elements dynamics in fish with different sex chromosome systems	10
Cannabis, the multibillion dollar plant that no genebank wanted	10
Reduced representation bisulfite sequencing (RRBS) analysis reveals variation in distribution and levels of DNA methylation in white birch (Betula papyrifera) exposed to nickel	10
Differential DNA methylation analysis reveals key genes in Chinese Qingyu and Landrace pigs	9
Whole genome sequencing and analysis of benzo(a)pyrene-degrading bacteria Bacillus cereus M72-4	9
Meta-analyses of the global multilocus genotypes of the human pathogen Campylobacter jejuni	9
Genomics-based taxonomy to clarify cannabis classification	9
Molecular characterization and chromosomal distribution of Tc1/mariner transposons in Boana species (Anura, Hylidae)	8
Detection of polymorphisms in the prion-like protein Doppel (PRND) gene in Jeju black cattle	8
Genes and proteins associated with ribeye area and meat tenderness in a commercial Nellore cattle population	8
Identification of adulteration in the market samples of saffron using morphology, HPLC, HPTLC, and DNA barcoding methods	8
Karyotype structure and cytogenetic markers of Amoimyrmex bruchi and Amoimyrmex silvestrii: contribution to understanding leaf-cutting ant relationships	8
Genetic insights: integrating DNA barcoding with taxonomy in the study of Baccaurea (Phyllanthaceae)	7
Aeromonas salmonicida isolates from Canada demonstrate wide distribution and clustering among mesophilic strains	7

Transposable element landscapes illuminate past evolutionary events in the endangered fern Vandenboschia speciosa	7
Alfalfa transcriptome profiling provides insight into miR156-mediated molecular mechanisms of heat stress tolerance	7
Evidence for hexasomic inheritance in Chrysanthemum morifolium Ramat. based on analysis of EST-SSR markers	7
DNA at the whim of the water: environmental DNA as a course-based undergraduate research experience	7
The filamins of Drosophila	7
Single-Locus species delimitation of Pronophilina butterflies (Nymphalidae: Satyrini) in the Colombian Andes: Congruence between morphology and MOTUs	7
Chloroplast genome of Ecbolium viride (Forssk.) Alston: plastome evolution and phylogenomics of Justiceae (Acanthaceae, Acanthoideae)	7
Using telomeric length measurements and methylation to understand the karyotype diversification of Ctenomys minutus (a small fossorial mammal)	6
First insights into the satellitomes and new evidence for the absence of canonical insect telomere in the Neuroptera order	6
Paenibacillus terrae NK3-4 regulates the transcription of growth-related and stress resistance-related genes in rice	6
Structure and genetic diversity of Canadian Maritimes wild hops	6
Lack of variation in nuclear DNA content in avian muscle	6
Heat shock responsive genes in Brassicaceae: genome-wide identification, phylogeny, and evolutionary associations within and between genera	6
Introgressed DNA within a Zea mays near-isogenic line displays lower levels of 24nt sRNA expression than the homologous region from the recurrent parent	6
Genome organization of major tandem repeats and their specificity for heterochromatin of macro- and microchromosomes in Japanese quail	5
Development and application of whole-chromosome painting of chromosomes 7A and 8A of Arachis duranensis based on chromosome-specific single-copy oligonucleotides	5
Genes influencing deposition of melanin in breast muscle of the Xuefeng black bone chicken based on bioinformatic analysis	5
Evolutionary speed of proteins in the genus Staphylococcus: a focus on proteins involved in natural competence	5
Fine mapping of a major QTL qPA7-1 for low hydrocyanic acid content in sorghum–sudangrass hybrid	5
Identification of alternative splicing and RNA-binding proteins involved in myocardial ischemia–reperfusion injury	5
Diversity and T-cell antigenic potentials of Mycoplasma mycoides subsp. mycoides vaccine candidates	5
Pangenomic analysis of three putative hydrocarbon degrading genera Limnohabitans, Aquabacterium, and Novosphingobium collected from freshwater sources	5
AVITI as an alternative to Illumina for low-cost genome-wide genotyping	5
Analysis of the winter oilseed rape recombination landscape suggests maternal–paternal bias	5
Whole-genome comparative analysis reveals genetic mechanisms of disease resistance and heat tolerance of tropical Bos indicus cattle breeds	5
Development of EST-SSR markers in Bergenia ciliata using de novo transcriptome sequencing	4
Specific amino acid changes correlate with pathogenic flavobacteria	4
Taxonomic classification of the bacterial endosymbiont Wolbachia based on next-generation sequencing: is there molecular evidence for its presence in tardigrades?	4
An endogenous retrovirus presumed to have been endogenized or relocated recently in a marsupial, the red-necked wallaby	4
Frequency of cytosine methylation in the adjacent regions of soybean retrotransposon SORE-1 depends on chromosomal location	4
Functional analysis of co-expression networks of zebrafish ace2 reveals enrichment of pathways associated with development and disease	4
Satellite DNAs, heterochromatin, and sex chromosomes of the wattled jacana (Charadriiformes; Jacanidae): a species with highly rearranged karyotype	4
Environmental drivers behind the genetic differentiation in mountain chickadees (Poecile gambeli)	4
Identification and characterization of heat-responsive microRNAs at the booting stage in two rice varieties, 9311 and Nagina 22	4
Comparative genome analysis of Pasteurella multocida strains of porcine origin	4
High nucleotide similarity of three Copia lineage LTR retrotransposons among plant genomes	4
Candidate genes validation for intramuscular fat content of Nellore Cattle	4
Genetic diversity and positive signatures of selection in indigenous cattle breeds of Iran	3
Gene regulation supporting sociality shared across lineages and variation in complexity	3
Analysis of apoptosis levels and MMP7 gene expression in ovaries of postpartum female rabbits after long-term use of LHRH-A3	3
Cytogenetic characterization and karyotype evolution in six Macroptilium species (Leguminosae)	3
Insights on mauritiana-like elements diversity in Mayetiola destructor and M. hordei (Diptera: Cecidomyiidae)	3
Understanding the genomics responses of freshwater zooplanktons to salinization: a research hotspot in a saltier world	3
Diversity and antigenic potentials of Mycoplasmopsis bovis secreted and outer membrane proteins within a core genome of strains isolated from North American bison and cattle	3
Phylogenomics of transcriptionally active AP2/ERF and bHLH transcription factors and study of their promoter regions in Nothapodytes nimmoniana (J.Graham) Mabb	3
Complete genome analysis of Pseudomonas furukawaii ZS1 isolated from grass carp (Ctenopharyngodon idellus) culture water	3
Note of appreciation	3
Chromosome painting reveals the genomic structure of three polyploid species of Ipomoea	3
Note of appreciation	3
Half-chromatid mutation as a possible cause of mosaic males and females in Hymenoptera and rare fertile male tortoiseshell cats	3

Chromosomes in the African frog genus Tomopterna (Pyxicephalidae) and probing the origin of tetraploid Tomopterna tandyi	3
Authentication of garlic (Allium sativum L.) supplements using a trnL^UAA mini-barcode	3
Plant immune resilience to a changing climate: molecular insights and biotechnological roadmaps	3
Differences between predicted outer membrane proteins of Pasteurella multocida, Histophilus somni, and genotype 1 and 2 Mannheimia haemolytica strains isolated from cattle	3
Chromosomal and molecular perspectives on Potamotrygon motoro (Müller & Henle, 1841) from central Amazon	3
Broad histone H4 monomethylation marks expressed genes involved in translation	3
Circadian rhythm and immunity: decoding chrono-immunology using the model organism Drosophila melanogaster	3
miR-181a-5p is a potential candidate epigenetic biomarker in multiple sclerosis	3
The complete chloroplast genome of Aristolochia fangchi provided insights into the phylogeny and species identification of Aristolochia	3
Genomic prediction in Brassica napus: evaluating the benefit of imputed whole-genome sequencing data	2
Identification of full-length genes involved in the biosynthesis of β-caryophyllene and lupeol from the leaf transcriptome of Ayapana triplinervis	2
Identification and expression analysis of C2H2-zinc finger protein genes reveals their role in stress tolerance in Brassica napus	2
Peroxisome inter-organelle cooperation in Drosophila	2
Satellitome analysis on Microtus thomasi (Arvicolinae) genome, a mammal species with high karyotype and sex chromosome variations	2
Genomic regions associated with coat color in Gir cattle	2
Association mapping identifies stable loci containing novel genes for developmental and reproductive traits in sorghum	2
Differential expression analysis of soybean pod tissue between Canadian environments identifies differences in sulfur-containing amino acid-related gene expression	2
DNA barcode analysis of the endangered green turtle (Chelonia mydas) in Mexico¹	2
Sequence-based identification of polyamine oxidase genes in Sorghum bicolor L.	2
Investigating the expression of fertility-regulating LncRNAs in multiparous and uniparous Shal ewe's ovaries	2
Autophagy in cell fate decisions: knowledge gained fromDrosophila	2
Molecular characterization of a novel mutation in the E1 flowering gene induced by gamma irradiation in soybean	2
Abundance of distal repetitive DNA sequences in Capsicum L. (Solanaceae) chromosomes	2
A second gene for resistance to four pathotypes of Plasmodiophora brassicae identified in the Brassica napus cultivar ‘Mendel’	2
Understanding microchromosomal organization and evolution in four representative woodpeckers (Picidae, Piciformes) through BAC-FISH analysis	2
Conventional cytogenetics and microsatellite chromosomal distribution in social wasp Mischocyttarus cassununga (Ihering, 1903) (Vespidae, Polistinae, Mischocyttarini)	2
A quick guide to the calcium-dependent protein kinase family in Brassica napus	2
The complete chloroplast genome of Persicaria perfoliata and comparative analysis with four medicinal plants of Polygonaceae	2
Identification of the 12-oxophytoeienoic acid reductase (OPR) gene family in pepper (Capsicum annuum L.) and functional characterization of CaOPR6 in pepper fruit development and	2
Molecular identification and DNA barcode screening of acaroid mites in ground flour dust	2
The repetitive DNA landscape in the brizantha agamic complex of Urochloa P. Beauv.	2
Genomic regions associated with resistance to Fusarium wilt in castor identified through linkage and association mapping approaches	2
The evolution of genomic organization through chromosomal rearrangements in Arctic charr (Salvelinus alpinus)	2
Strains of Apis mellifera ligustica honey bees artificially bred for apicultural traits are not consistently differentiated by mitochondrial DNA genome markers	2
Patterns of genome size evolution versus fraction of repetitive elements in statu nascendi species: the case of the willistoni subgroup of Drosophila (Diptera, Drosophilidae)	2
Fingerprint construction through genotyping by sequencing for applied breeding in Brassica rapa	2