APMIS

Article	Citations
Routine use of MSI testing in colorectal cancer using a proposed algorithm	134
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APMIS 2022 focus issue on human microbiome in disease and pathology	40
Misleading mental models: Ceci n’est pas un biofilm	38
A metatranscriptomic approach to explore longitudinal tissue specimens from non‐healing diabetes related foot ulcers	30
Aquaporins in pancreatic ductal adenocarcinoma	28
Performance of automated antimicrobial susceptibility testing for the detection of antimicrobial resistance in gram‐negative bacteria: a NordicAST study	25
Immune responses to mRNA‐based vaccines given as a third COVID‐19 vaccine dose in people living with HIV—a literature review	25
Bacterial invasion of the submicron osteocyte lacuna–canaliculi network (OLCN): a part of osteomyelitis disease biology	24
Toll‐like receptors 3, 7, 8, and 9 in gastric cancer	21
Fast processing of gynecologic cancer tissue in Danish Cancer Biobank makes them well‐suited for biomarker studies	19
Risk of orthopaedic implant infection during bacteraemia	19
Automated assessment of Ki‐67 proliferation index in neuroendocrine tumors by deep learning	18
Anti‐PD‐L1 chimeric antigen receptor natural killer cell: Characterization and functional analysis	18
Short communication: dog bite and back pain	18
Bacterial aerobic respiration is a major consumer of oxygen in sputum from patients with acute lower respiratory tract infection	16
Association of Toll‐like receptor 2 rs111200466 polymorphism with low serum levels of IL‐33 in early childhood	16
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Aneurysmal bone cyst and osteoblastoma after neoadjuvant denosumab: histologic spectrum and potential diagnostic pitfalls	15
Bacteriophage therapy and infective endocarditis – is it realistic?	14
Dynamic distribution of systemically administered antibiotics in orthopeadically relevant target tissues and settings	14
Estimated incidence of symptomatic Lyme borreliosis cases in five southern coastal counties in Norway, 2022	14
Injection site microflora in persons with diabetes: why needle reuse is not associated with increased infections?	13
Association of TLR4 polymorphisms (Asp299Gly and Thr399Ile) with sepsis: a meta‐analysis and trial sequence analysis	12
Lactams Exhibit Potent Antifungal Activity Against Monospecies and Multispecies Interkingdom Biofilms on a Novel Hydrogel Skin Model	12

Effects of changes in SHP2 expression on liver fibrosis by influencing the apoptosis of hepatic stellate cells	12
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Understanding the biofilm development of Acinetobacter baumannii and novel strategies to combat infection	11
Prevalence of paediatric hyperinflammatory conditions in paediatric and adolescent hospitalized COVID‐19 patients: a systematic review and meta‐analysis	10
Tunneled Catheter‐Related Bloodstream Infections in Chronic Hemodialysis Patients: Frequency, Risk Factors, and Outcomes—A 10‐Year Analysis	10
Inhibition of miR‐222‐3p Alleviates Acute Pancreatitis by Negatively Regulating the Expression of SIRT1	10
Exploring the immune‐modulating properties of boswellic acid in experimental autoimmune encephalomyelitis	10
Characteristics of de novo cancer in liver transplant recipients	10
Prevalence, molecular markers, and outcome of bronchial squamous carcinoma in situ in high‐risk subjects	10
Importance of C24:2 sulfatide	10
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High seroprevalence of SARS‐CoV‐2 antibodies in healthcare workers in COVID‐19 wards indicates an occupational hazard—a prospective cohort study during the first year of the	10
Inflammatory mediators in bacterial vaginosis: The role of cytokines	9
Detection of Anti‐CMV TCR CDR3s via Blood and Tumor Exome Files Correlates With Increased Survival for Stomach Adenocarcinoma and Soft Tissue Sarcoma	9
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Performance of PCR‐based syndromic testing compared to bacterial culture in patients with suspected pneumonia applying microscopy for quality assessment	9
Immunohistochemical detection of double‐stranded RNA in formalin‐fixed paraffin‐embedded tissue	9
Clinical characteristics and risk factors of connective tissue disease complicated with bronchiectasis and pulmonary infection	9
Antimicrobial susceptibility testing of bone and joint pathogens using isothermal microcalorimetry	9
Biomarkers for iron metabolism among patients hospitalized with community‐acquired pneumonia caused by infection with SARS‐CoV‐2, bacteria, and influenza	9
New contributions on chronic low back pain: disc infection or contaminated cultures?	8
Pan‐Cancer Analysis Reveals SKA3 as a Potential Diagnostic and Prognostic Biomarker	8
No Bacterial Biomass Detected in Tissue From Patients With Ovarian Cancer and Serous Tubal Intraepithelial Carcinomas Using 16S rDNA Sequencing	8
Clinical Characteristics and Laboratory Diagnoses of Pediatric Patients Hospitalized During an Outbreak of Mycoplasma pneumoniae	8
Our current clinical understanding of Candida biofilms: where are we two decades on?	8
Prognostic Significance of Immunohistochemical Surrogate Molecular Sub‐Typing of Small Cell Lung Carcinoma	8
The value of umbilical cord insertion site sampling in detecting maternal and/or fetal inflammatory response	8
Growth factor expression is enhanced, and extracellular matrix proteins are depressed in healing skin wounds in septic patients compared with healthy controls	8
Aquaporin‐1 in breast cancer	7
Evaluating the Efficacy of Capreomycin and Levofloxacin Combination Therapy in Multidrug‐Resistant Tuberculosis Patients	7
Undifferentiated–dedifferentiated endometrial carcinoma; the reappearance of an old friend with insights into the new data	7
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Fungal positivity and other laboratory parameters in HIV‐ and non‐HIV‐related cryptococcal meningitis patients upon antifungal treatment	7
Microbiological Analysis of Lower Airway Samples: Does It Influence the Outcome in Patients With Community‐Acquired Pneumonia?	7
Viral intruders in the heart: A review of RNA viruses and their role in cardiac disorders	7
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Forssman and the staphylococcal hemolysins	7
RETRACTION: Molecular Diversity of the Planctomycetes in the Human Gut Microbiota in France and Senegal	7
The use of core genome multilocus sequence typing to determine the duration of vancomycin‐resistant Enterococcus faecium outbreaks	6
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Mapping bacterial biofilm on explanted orthopedic hardware: An analysis of 14 consecutive cases	6
Molecular epidemiology of community‐ and hospital‐associated Clostridioides difficile infections in Jönköping, Sweden, October 2017 – March 2018	6
Prevalence and characteristics of 11 potentially diarrhoeagenic microbes in asymptomatic individuals in Norway, 2015–2020	6
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Gene polymorphisms of TLR10: effects on bacterial meningitis outcomes in Angolan children	6
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Antibiotic resistances of Pseudomonas aeruginosa and Acinetobacter baumannii in urine cultures: experience in a hospital of Southeast Spain	6
Antifungal drug resistance in Candida: a special emphasis on amphotericin B	6
STK11 mutation affects the killing effect of NK cells to promote the progression of lung adenocarcinoma	6

Dynamics of endemic human coronavirus and SARS‐CoV‐2 in a hospital of Madrid, Spain. Retrospective study from June 2020 to July 2023	6
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Staining pattern of specific and cross‐reacting Melan‐A antibodies: A comparative study on 15,840 samples from 133 human tumor types	6
Pathophysiological microenvironments in oral candidiasis	6
Azole resistance in Candida auris: mechanisms and combinatorial therapy	5
Inter‐observer agreement of tumor infiltrating lymphocytes in primary HER2‐positive breast cancer and correlation between tissue microarray and full tumor‐sections	5
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PD‐L1 and PD‐1 expression in thyroid follicular epithelial dysplasia: Hashimoto thyroiditis related atypia and potential papillary carcinoma precursor	5
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Prevalence and Co‐Detection Rates of SARS‐CoV‐2, Influenza, and Respiratory Syncytial Virus: A Retrospective Analysis	5
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A novel fully human recombinant antibody neutralizing α‐hemolysin of Staphylococcus aureus	5
Intestinal metaplasia is a precursor lesion for sinonasal intestinal‐type adenocarcinoma: genomic investigation of a case proving this hypothesis	5
How to Write a Pathology Research Paper—Basic Principles and Beyond—A Primer for Residents	5
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Diarrhoea‐causing microorganisms are rare in adult patients undergoing diagnostic laparoscopy for suspected appendicitis: a prospective observational cohort study	5
RE: Aetiological profile of acute encephalitis syndrome in Assam, India, during a 4‐year period from 2019 to 2022	4
An insight on the eye bacterial microbiota and its role on dry eye disease	4
A unique case of Fusobacterium nucleatum spondylodiscitis communicating with a pleural empyema through a fistula	4
Analyses of ABO blood groups with susceptibility and symptomatic variations of COVID‐19 infection, a questionnaire‐based survey	4
Emergence and fixation of SARS‐CoV‐2 minority variants in a chronically infected patient receiving therapy in Denmark	4
Editorial for PMI Journal 100‐Years Anniversary Focus Issue	4
The microbiome in the pathogenesis of lung cancer	4
Mucosal microbiotas and their role in stem cell transplantation	4
Prognostic implications of the tumor immune microenvironment and immune checkpoint pathway in primary central nervous system diffuse large B‐cell lymphoma in the North Indian population	4
Patients with tinea pedis and onychomycosis are more likely to use disinfectants when washing textiles than controls	4
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Antimicrobial resistance of Pseudomonas aeruginosa in a cystic fibrosis population after introduction of a novel cephalosporin/β‐lactamase inhibitor combination	4
Differences in gene expression despite identical histomorphology in sinonasal intestinal‐type adenocarcinoma and metastases from colorectal adenocarcinoma	4
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Peer‐to‐peer validation of Ki‐67 scoring in a pathology quality circle as a tool to assess interobserver variability: are we better than we thought?	4
Tertiary lymphoid structures and gastric cancer prognosis	4
Humoral immune response of Galleria mellonella after mono‐ and co‐injection with Hypericum perforatum extract and Candida albicans	4
Rhinoviral Infection of the Human Lung Vascular Endothelium May Protect From the Secondary Infection With Rhinovirus RV‐16	4
Circ_0006873 suppresses the osteogenic differentiation of human‐derived mesenchymal stem cells through mediating miR‐20a/SMURF2 axis in vitro	4
Infectious native aortic aneurysm with negative blood cultures: do not forget the pneumococcal urinary antigen test!	4
Systematic Morphological Assesment of the Ascending Aorta Dissection: Application of Cardiovascular Pathology Consensus Statement in Tertiary Care Hospital in Finland	4
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The expression and prognostic relevance of CDH3 in tongue squamous cell carcinoma	3
In Vitro Activity of Antifungals in Combination With Meropenem or Daptomycin Against Dual Candida albicans–Bacterial Biofilms	3
Nanomaterials and Candida auris: A Systematic Review of Emerging Strategies	3
No evidence of increased anti‐M3 muscarinic acetylcholine receptor autoantibodies in SSA‐positive connective tissue disease patients	3
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Detection methods targeting the positive‐ and negative‐sense RNA transcripts from plus‐stranded RNA viruses	3
Historical concepts and contemporary perspectives of dental caries—a tribute to Henrik Dam (1895–1976)	3
Screening the Tocriscreen™ bioactive compound library in search for inhibitors of Candida biofilm formation	3
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Correction to “The relevance of ERG immunoexpression intensity for prostatic adenocarcinoma in radical prostatectomy of 635 samples”	3
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Highly sensitive duplex MSI test and BAT40 germline polymorphism	3
Do mast cells contribute to the continued survival of vertebrates?	3
Blocking coprophagy increases the levels of inflammation and depression in healthy mice as well as mice receiving fecal microbiota transplantation from disease model mice donors	2
Beta‐cell activity and development of Type 1 diabetes	2
Corrigendum	2
Web‐grading—a tool to test personal grading of renal and prostate cancer	2
Metabolic syndrome, soluble CD40L, and biomarkers of endothelial dysfunction in people living with HIV	2
Aquaporin‐5 in breast cancer	2
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The expression of keratin 17 and p27 predicts clinical outcomes in colorectal cancer	2
Good's syndrome: brief overview of an enigmatic immune deficiency	2
Elevated expression of the AIM2 gene in response to Helicobacter pylori along with the decrease of NLRC4 inflammasome is associated with peptic ulcer development	2
Rapid identification of SARS‐CoV‐2 variants using stable high‐frequency mutation sites	2
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BUB1 predicts poor prognosis and immune status in liver hepatocellular carcinoma	2
In vitro determination of the susceptibility of Malassezia furfur biofilm to different commercially used antimicrobials	2
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The impact of mental models on the treatment and research of chronic infections due to biofilms	2

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Celebrating a century of APMIS: a legacy of pathology, microbiology, and immunology	2
HERC5: a comprehensive in silico analysis of its diagnostic, prognostic, and therapeutic potential in cancer	2
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Novel sampling technique maintaining the two‐dimensional organization of microbes during cultivation from chronic wounds: The Imprint method	2
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Short communication: first case of bacteraemia caused by Dielma fastidiosa in a patient hospitalized with diverticulitis	2
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Predicting the clinical efficacy of JAK inhibitor treatment for patients with rheumatoid arthritis based on Fas+ T cell subsets	2
Anemia in liver transplant recipients: prevalence, severity, risk factors, and survival	2
Systematic review on the current knowledge and use of single‐cell RNA sequencing in head and neck cancer	2
Evaluation of transcription factors and cytokine expressions of T‐cell subsets in CD19 deficiency and their possible relationship with autoimmune disease	2
Dynamics of a Staphylococcus aureus infective endocarditis simulation model	2
Examining the Role of Virulence Proteins From Pathogenic Anaerobes in the Initiation of Colorectal Cancer	2
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Study of humoral and cellular immunity in vaccinated with mRNA‐1273	2
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The EUCAST Disk Diffusion Method for Antimicrobial Susceptibility Testing of Oral Anaerobes	1
Short communication: abdominal infective native aortic aneurysm due to an unusual gram‐negative rod: beware of the dog!	1
Investigating the role of Candida albicans as a universal substrate for oral bacteria using a transcriptomic approach: implications for interkingdom biofilm control?	1
Shiga toxin‐producing Escherichia coli (STEC) stool multiplex PCR can replace culture for clinical diagnosis and follow‐up	1
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HIV‐associated infective native aortic aneurysms	1
Current and novel diagnostics for orthopedic implant biofilm infections: a review	1
Single cells and bacterial biofilm populations in chronic wound infections	1
Novel human in vitro vegetation simulation model for infective endocarditis	1
APMIS focus issue 2024—The microenvironment in human disease	1
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Unravelling the intricacies of Porphyromonas gingivalis: virulence factors, lifecycle dynamics and phytochemical interventions for periodontal disease management	1
Increased sputum lactate during oral glucose tolerance test in cystic fibrosis	1
Application of computer‐generated images to train pattern recognition used in semiquantitative immunohistochemistry scoring	1
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Is clindamycin a potential treatment for prostatitis?	1
Pathological image profiling identifies onco‐microbial, tumor immune microenvironment, and prognostic subtypes of colorectal cancer	1
Peritumoral histopathologic findings in patients with chronic viral hepatitis‐associated hepatocellular carcinoma	1
Whole genome sequencing reveals two genetically distinct MRSA outbreaks among people who inject drugs and homeless people in Copenhagen	1
Are we ready for translational research based on material and data from the Danish CancerBiobank and can we gain new knowledge from biobank registration?	1
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Expression of toll‐like receptors in recurrent pleomorphic adenoma and carcinoma ex pleomorphic adenoma	1
Detection and characterization of HIV‐1 group O and HIV‐2 in the Central African Republic	1
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Close monitoring and early intervention: management principles for cystic fibrosis in Denmark	1
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Dynamics of skin microbiota in shoulder surgery infections	1
Analysis of the correlation between P27 expression and Helicobacter pylori infection in gastric cancer	1
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Enhancing PMMA Cements With Manually Added Antimicrobial Agents	1
Stage‐related increase in PIM2 expression in mycosis fungoides	1
Prognostic impact of subepithelial Helicobacter pylori infection on clinical outcomes in patients with dyspepsia	1
Virology and safety profile of Molnupiravir at three different doses for treatment of SARS‐CoV‐2: a systematic review and meta‐analysis	1
Host‐microbe metatranscriptome reveals differences between acute and chronic infections in diabetes‐related foot ulcers	1
Louis Pasteur—The life of a controversial scientist with a prepared mind, driven by curiosity, motivation, and competition	1
Primary skin abscess microbiota a systematic review	1
Antigen Specificity: A Fluctuating Aspect in the Development of Clinical Antibodies?	1
Withdrawal	1
PD‐L1 expression and FGFR‐mutations among Danish patients diagnosed with metastatic urothelial carcinoma: A retrospective and descriptive study	1
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Cranberry‐lingonberry juice affects the gut and urinary microbiome in children ‐ a randomized controlled trial	1
The impact of preoperative treatments on the immune environment of rectal cancer	1
Prognostic histological markers in oral tongue squamous cell carcinoma patients treated with (chemo)radiotherapy	1
Long‐term disease course, cost and prognosis of inflammatory bowel disease: epidemiological studies of a European and a Danish inception cohort	1
IGSF3 tissue expression in squamous cell carcinoma of the oropharynx: a novel tool for prognosis assessment in HPV‐related and HPV‐unrelated disease	1
The gut microbiota can orchestrate the signaling pathways in colorectal cancer	0
Gastrointestinal dysbiosis and Escherichia coli pathobionts in inflammatory bowel diseases	0
A systematic review and meta‐analysis: rising prevalence of colistin resistance in ICU‐acquired Gram‐negative bacteria	0
Centennial celebrations of the Danish Pasteur Society	0
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The criteria for chronic rhinosinusitis in children with cystic fibrosis are rarely fulfilled after initiation of CFTR modulator treatment	0
Myositis ossificans mimicking bone surface osteosarcoma: case report with literature review	0
Immunohistochemical somatostatin receptor expression in insulinomas	0
Louis Pasteur and the birth of microbiology in Denmark	0
Exploring the role of mesenchymal stem cells in modulating immune responses via Treg and Th2 cell activation: insights from mouse model of multiple sclerosis	0
The infectious capacity of Enterococcus faecalis, Staphylococcus aureus, and Staphylococcus saprophyticus in a porcine model of urinary tract infection	0
Correction to “Metabolic Drives Affecting Th17/Treg Gene Expression Changes and Differentiation: Impact on Immune‐Microenvironment Regulation”	0
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High YAP and TEAD4 immunolabelings are associated with poor prognosis in patients with gallbladder cancer	0
Cytokeratin 13 (CK13) expression in cancer: a tissue microarray study on 10,439 tumors	0
PD‐L1 immunohistochemistry: Clones, cutoffs, and controversies	0
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Evaluation of the cross‐protection of the Vero cell‐derived attenuated influenza vaccines with compound adjuvant, through intranasal immunization	0
Reply to “Comment on micro‐ and nanorobots for biofilm eradication”	0
Immunohistochemical Profiling of Interferon‐Stimulated Genes in Histopathological Specimens: A Potential Screening Approach for Viral Infections	0
Tumor‐Derived Exosomes Enriched by miRNA‐211a Promote Antitumor Immune Response in B16F10 Tumor‐Bearing Mice	0
Activity of propyl‐propane‐thiosulfinate and propyl‐propane‐thiosulfonate against carbapenem‐resistant Gram‐negative bacteria	0
High prevalence of pharyngeal bacterial pathogens among healthy adolescents and young adults	0
Staphylococcus aureus From Prosthetic Joint Infections and Blood Cultures Display the Same Genetic Background	0
Autoimmune vulnerability of beta versus alpha cells might be due to increased 2′,5′ synthetase	0
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Clinical and Microbiological Characteristics of Hospitalized Adults Aged ≤ 45 Years With Clostridioides (Formerly Clostridium) difficile Infection: A Prospective Observational Coh	0