APMIS

Article	Citations
Routine use of MSI testing in colorectal cancer using a proposed algorithm	121
APMIS 2022 focus issue on human microbiome in disease and pathology	66
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The effect of gamma and microwave radiation sterilization on periodontological grafts for microbiological evaluation	36
Misleading mental models: Ceci n’est pas un biofilm	35
A metatranscriptomic approach to explore longitudinal tissue specimens from non‐healing diabetes related foot ulcers	28
Risk of orthopaedic implant infection during bacteraemia	27
Fast processing of gynecologic cancer tissue in Danish Cancer Biobank makes them well‐suited for biomarker studies	25
Bacterial invasion of the submicron osteocyte lacuna–canaliculi network (OLCN): a part of osteomyelitis disease biology	24
Automated assessment of Ki‐67 proliferation index in neuroendocrine tumors by deep learning	23
Aquaporins in pancreatic ductal adenocarcinoma	19
Performance of automated antimicrobial susceptibility testing for the detection of antimicrobial resistance in gram‐negative bacteria: a NordicAST study	17
Toll‐like receptors 3, 7, 8, and 9 in gastric cancer	17
Immune responses to mRNA‐based vaccines given as a third COVID‐19 vaccine dose in people living with HIV—a literature review	17
Animal models of chronic and recurrent Pseudomonas aeruginosa lung infection: significance of macrolide treatment	16
Distinct contribution of hyperbaric oxygen therapy to human neutrophil function and antibiotic efficacy against Staphylococcus aureus	16
Anti‐PD‐L1 chimeric antigen receptor natural killer cell: Characterization and functional analysis	15
Dynamic distribution of systemically administered antibiotics in orthopeadically relevant target tissues and settings	15
Short communication: dog bite and back pain	15
Bacterial aerobic respiration is a major consumer of oxygen in sputum from patients with acute lower respiratory tract infection	14
Diagnostic utility of the combined use of HNF4A and GATA3 in distinction between primary and metastatic breast and gastric carcinomas	14
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Aneurysmal bone cyst and osteoblastoma after neoadjuvant denosumab: histologic spectrum and potential diagnostic pitfalls	13
Association of Toll‐like receptor 2 rs111200466 polymorphism with low serum levels of IL‐33 in early childhood	13

Bacteriophage therapy and infective endocarditis – is it realistic?	12
Lactams Exhibit Potent Antifungal Activity Against Monospecies and Multispecies Interkingdom Biofilms on a Novel Hydrogel Skin Model	12
Injection site microflora in persons with diabetes: why needle reuse is not associated with increased infections?	12
Effects of changes in SHP2 expression on liver fibrosis by influencing the apoptosis of hepatic stellate cells	12
Association of TLR4 polymorphisms (Asp299Gly and Thr399Ile) with sepsis: a meta‐analysis and trial sequence analysis	12
Tunneled Catheter‐Related Bloodstream Infections in Chronic Hemodialysis Patients: Frequency, Risk Factors, and Outcomes—A 10‐Year Analysis	11
Estimated incidence of symptomatic Lyme borreliosis cases in five southern coastal counties in Norway, 2022	11
Exploring the immune‐modulating properties of boswellic acid in experimental autoimmune encephalomyelitis	10
Importance of C24:2 sulfatide	10
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Prevalence of paediatric hyperinflammatory conditions in paediatric and adolescent hospitalized COVID‐19 patients: a systematic review and meta‐analysis	10
Prevalence, molecular markers, and outcome of bronchial squamous carcinoma in situ in high‐risk subjects	10
Characteristics of de novo cancer in liver transplant recipients	10
Understanding the biofilm development of Acinetobacter baumannii and novel strategies to combat infection	10
Clinical Characteristics and Laboratory Diagnoses of Pediatric Patients Hospitalized During an Outbreak of Mycoplasma pneumoniae	9
Biomarkers for iron metabolism among patients hospitalized with community‐acquired pneumonia caused by infection with SARS‐CoV‐2, bacteria, and influenza	9
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No Bacterial Biomass Detected in Tissue From Patients With Ovarian Cancer and Serous Tubal Intraepithelial Carcinomas Using 16S rDNA Sequencing	9
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Immunohistochemical detection of double‐stranded RNA in formalin‐fixed paraffin‐embedded tissue	9
The value of umbilical cord insertion site sampling in detecting maternal and/or fetal inflammatory response	9
High seroprevalence of SARS‐CoV‐2 antibodies in healthcare workers in COVID‐19 wards indicates an occupational hazard—a prospective cohort study during the first year of the	9
Inflammatory mediators in bacterial vaginosis: The role of cytokines	8
Our current clinical understanding of Candida biofilms: where are we two decades on?	8
Pan‐Cancer Analysis Reveals SKA3 as a Potential Diagnostic and Prognostic Biomarker	8
Antimicrobial susceptibility testing of bone and joint pathogens using isothermal microcalorimetry	8
Clinical characteristics and risk factors of connective tissue disease complicated with bronchiectasis and pulmonary infection	8
Performance of PCR‐based syndromic testing compared to bacterial culture in patients with suspected pneumonia applying microscopy for quality assessment	8
New contributions on chronic low back pain: disc infection or contaminated cultures?	8
Undifferentiated–dedifferentiated endometrial carcinoma; the reappearance of an old friend with insights into the new data	7
Viral intruders in the heart: A review of RNA viruses and their role in cardiac disorders	7
Dynamics of endemic human coronavirus and SARS‐CoV‐2 in a hospital of Madrid, Spain. Retrospective study from June 2020 to July 2023	7
Forssman and the staphylococcal hemolysins	7
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STK11 mutation affects the killing effect of NK cells to promote the progression of lung adenocarcinoma	7
Fungal positivity and other laboratory parameters in HIV‐ and non‐HIV‐related cryptococcal meningitis patients upon antifungal treatment	7
Pertussis seroprevalence among adults of reproductive age (20–39 years) in fourteen European countries	7
Characterization of a lytic EBP bacteriophage with large size genome against Enterobacter cloacae	7
Gene polymorphisms of TLR10: effects on bacterial meningitis outcomes in Angolan children	7
Aquaporin‐1 in breast cancer	7
Toll‐like receptor 5 and 8 in hepatocellular carcinoma	7
Evaluating the Efficacy of Capreomycin and Levofloxacin Combination Therapy in Multidrug‐Resistant Tuberculosis Patients	7
RETRACTION: Molecular Diversity of the Planctomycetes in the Human Gut Microbiota in France and Senegal	7
Growth factor expression is enhanced, and extracellular matrix proteins are depressed in healing skin wounds in septic patients compared with healthy controls	7
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Microbiological Analysis of Lower Airway Samples: Does It Influence the Outcome in Patients With Community‐Acquired Pneumonia?	6
Inter‐observer agreement of tumor infiltrating lymphocytes in primary HER2‐positive breast cancer and correlation between tissue microarray and full tumor‐sections	6
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Mapping bacterial biofilm on explanted orthopedic hardware: An analysis of 14 consecutive cases	6

The use of core genome multilocus sequence typing to determine the duration of vancomycin‐resistant Enterococcus faecium outbreaks	6
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Prevalence and Co‐Detection Rates of SARS‐CoV‐2, Influenza, and Respiratory Syncytial Virus: A Retrospective Analysis	6
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How to Write a Pathology Research Paper—Basic Principles and Beyond—A Primer for Residents	6
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Molecular epidemiology of community‐ and hospital‐associated Clostridioides difficile infections in Jönköping, Sweden, October 2017 – March 2018	6
Pathophysiological microenvironments in oral candidiasis	5
A novel fully human recombinant antibody neutralizing α‐hemolysin of Staphylococcus aureus	5
Staining pattern of specific and cross‐reacting Melan‐A antibodies: A comparative study on 15,840 samples from 133 human tumor types	5
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Prevalence and characteristics of 11 potentially diarrhoeagenic microbes in asymptomatic individuals in Norway, 2015–2020	5
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Antifungal drug resistance in Candida: a special emphasis on amphotericin B	5
Diarrhoea‐causing microorganisms are rare in adult patients undergoing diagnostic laparoscopy for suspected appendicitis: a prospective observational cohort study	5
Antibiotic resistances of Pseudomonas aeruginosa and Acinetobacter baumannii in urine cultures: experience in a hospital of Southeast Spain	5
PD‐L1 and PD‐1 expression in thyroid follicular epithelial dysplasia: Hashimoto thyroiditis related atypia and potential papillary carcinoma precursor	5
Azole resistance in Candida auris: mechanisms and combinatorial therapy	5
Systematic Morphological Assesment of the Ascending Aorta Dissection: Application of Cardiovascular Pathology Consensus Statement in Tertiary Care Hospital in Finland	4
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The microbiome in the pathogenesis of lung cancer	4
Issue Information	4
Editorial for PMI Journal 100‐Years Anniversary Focus Issue	4
Circ_0006873 suppresses the osteogenic differentiation of human‐derived mesenchymal stem cells through mediating miR‐20a/SMURF2 axis in vitro	4
Antimicrobial resistance of Pseudomonas aeruginosa in a cystic fibrosis population after introduction of a novel cephalosporin/β‐lactamase inhibitor combination	4
Infectious native aortic aneurysm with negative blood cultures: do not forget the pneumococcal urinary antigen test!	4
Patients with tinea pedis and onychomycosis are more likely to use disinfectants when washing textiles than controls	4
Peer‐to‐peer validation of Ki‐67 scoring in a pathology quality circle as a tool to assess interobserver variability: are we better than we thought?	4
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Differences in gene expression despite identical histomorphology in sinonasal intestinal‐type adenocarcinoma and metastases from colorectal adenocarcinoma	4
Emergence and fixation of SARS‐CoV‐2 minority variants in a chronically infected patient receiving therapy in Denmark	4
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Prognostic implications of the tumor immune microenvironment and immune checkpoint pathway in primary central nervous system diffuse large B‐cell lymphoma in the North Indian population	4
Humoral immune response of Galleria mellonella after mono‐ and co‐injection with Hypericum perforatum extract and Candida albicans	4
Intestinal metaplasia is a precursor lesion for sinonasal intestinal‐type adenocarcinoma: genomic investigation of a case proving this hypothesis	4
Analyses of ABO blood groups with susceptibility and symptomatic variations of COVID‐19 infection, a questionnaire‐based survey	4
Screening the Tocriscreen™ bioactive compound library in search for inhibitors of Candida biofilm formation	3
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Mucosal microbiotas and their role in stem cell transplantation	3
An insight on the eye bacterial microbiota and its role on dry eye disease	3
No evidence of increased anti‐M3 muscarinic acetylcholine receptor autoantibodies in SSA‐positive connective tissue disease patients	3
Detection methods targeting the positive‐ and negative‐sense RNA transcripts from plus‐stranded RNA viruses	3
The expression and prognostic relevance of CDH3 in tongue squamous cell carcinoma	3
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Correction to “The relevance of ERG immunoexpression intensity for prostatic adenocarcinoma in radical prostatectomy of 635 samples”	3
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Tertiary lymphoid structures and gastric cancer prognosis	3
RE: Aetiological profile of acute encephalitis syndrome in Assam, India, during a 4‐year period from 2019 to 2022	3
Formulation of a recombinant HIV‐1 polytope candidate vaccine with naloxone/alum mixture: induction of multi‐cytokine responses with a higher regulatory mechanism	3
Do mast cells contribute to the continued survival of vertebrates?	3
Highly sensitive duplex MSI test and BAT40 germline polymorphism	3
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Rhinoviral Infection of the Human Lung Vascular Endothelium May Protect From the Secondary Infection With Rhinovirus RV‐16	3
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A unique case of Fusobacterium nucleatum spondylodiscitis communicating with a pleural empyema through a fistula	3
Vitamin A deficiency in K14E7HPV expressing transgenic mice facilitates the formation of malignant cervical lesions	3
Historical concepts and contemporary perspectives of dental caries—a tribute to Henrik Dam (1895–1976)	3
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Study of humoral and cellular immunity in vaccinated with mRNA‐1273	2
Corrigendum	2
Reliability of Ki67 visual scoring app compared to eyeball estimate and digital image analysis and its prognostic significance in hormone receptor‐positive breast cancer	2
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Predicting the clinical efficacy of JAK inhibitor treatment for patients with rheumatoid arthritis based on Fas+ T cell subsets	2
Aquaporin‐5 in breast cancer	2
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Sclerosing epithelioid fibrosarcoma: in‐depth review of a genetically heterogeneous tumor	2
Metabolic syndrome, soluble CD40L, and biomarkers of endothelial dysfunction in people living with HIV	2
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Novel sampling technique maintaining the two‐dimensional organization of microbes during cultivation from chronic wounds: The Imprint method	2
Beta‐cell activity and development of Type 1 diabetes	2
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Celebrating a century of APMIS: a legacy of pathology, microbiology, and immunology	2
Systematic review on the current knowledge and use of single‐cell RNA sequencing in head and neck cancer	2

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The impact of mental models on the treatment and research of chronic infections due to biofilms	2
BUB1 predicts poor prognosis and immune status in liver hepatocellular carcinoma	2
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Rapid identification of SARS‐CoV‐2 variants using stable high‐frequency mutation sites	2
Dynamics of a Staphylococcus aureus infective endocarditis simulation model	2
Short communication: first case of bacteraemia caused by Dielma fastidiosa in a patient hospitalized with diverticulitis	2
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Good's syndrome: brief overview of an enigmatic immune deficiency	2
In vitro determination of the susceptibility of Malassezia furfur biofilm to different commercially used antimicrobials	2
Status: nosocomial transmission and prevention of SARS‐CoV‐2 in a Danish context	2
Elevated expression of the AIM2 gene in response to Helicobacter pylori along with the decrease of NLRC4 inflammasome is associated with peptic ulcer development	2
HERC5: a comprehensive in silico analysis of its diagnostic, prognostic, and therapeutic potential in cancer	2
Web‐grading—a tool to test personal grading of renal and prostate cancer	2
Evaluation of Pseudomonas aeruginosa pathogenesis and therapeutics in military‐relevant animal infection models	2
Blocking coprophagy increases the levels of inflammation and depression in healthy mice as well as mice receiving fecal microbiota transplantation from disease model mice donors	2
The expression of keratin 17 and p27 predicts clinical outcomes in colorectal cancer	2
Evaluation of transcription factors and cytokine expressions of T‐cell subsets in CD19 deficiency and their possible relationship with autoimmune disease	1
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Prognostic impact of subepithelial Helicobacter pylori infection on clinical outcomes in patients with dyspepsia	1
Are we ready for translational research based on material and data from the Danish CancerBiobank and can we gain new knowledge from biobank registration?	1
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Close monitoring and early intervention: management principles for cystic fibrosis in Denmark	1
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Cranberry‐lingonberry juice affects the gut and urinary microbiome in children ‐ a randomized controlled trial	1
Long‐term disease course, cost and prognosis of inflammatory bowel disease: epidemiological studies of a European and a Danish inception cohort	1
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The impact of preoperative treatments on the immune environment of rectal cancer	1
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Application of computer‐generated images to train pattern recognition used in semiquantitative immunohistochemistry scoring	1
Single cells and bacterial biofilm populations in chronic wound infections	1
Expression of toll‐like receptors in recurrent pleomorphic adenoma and carcinoma ex pleomorphic adenoma	1
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Anemia in liver transplant recipients: prevalence, severity, risk factors, and survival	1
Enhancing PMMA Cements With Manually Added Antimicrobial Agents	1
Detection and characterization of HIV‐1 group O and HIV‐2 in the Central African Republic	1
Host‐microbe metatranscriptome reveals differences between acute and chronic infections in diabetes‐related foot ulcers	1
Current and novel diagnostics for orthopedic implant biofilm infections: a review	1
APMIS focus issue 2024—The microenvironment in human disease	1
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Whole genome sequencing reveals two genetically distinct MRSA outbreaks among people who inject drugs and homeless people in Copenhagen	1
Analysis of the correlation between P27 expression and Helicobacter pylori infection in gastric cancer	1
Stage‐related increase in PIM2 expression in mycosis fungoides	1
Virology and safety profile of Molnupiravir at three different doses for treatment of SARS‐CoV‐2: a systematic review and meta‐analysis	1
IGSF3 tissue expression in squamous cell carcinoma of the oropharynx: a novel tool for prognosis assessment in HPV‐related and HPV‐unrelated disease	1
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Is clindamycin a potential treatment for prostatitis?	1
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The EUCAST Disk Diffusion Method for Antimicrobial Susceptibility Testing of Oral Anaerobes	1
Dynamics of skin microbiota in shoulder surgery infections	1
HIV‐associated infective native aortic aneurysms	1
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Antigen Specificity: A Fluctuating Aspect in the Development of Clinical Antibodies?	1
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Primary skin abscess microbiota a systematic review	1
Louis Pasteur—The life of a controversial scientist with a prepared mind, driven by curiosity, motivation, and competition	1
Unravelling the intricacies of Porphyromonas gingivalis: virulence factors, lifecycle dynamics and phytochemical interventions for periodontal disease management	1
Increased sputum lactate during oral glucose tolerance test in cystic fibrosis	1
Withdrawal	1
Prognostic histological markers in oral tongue squamous cell carcinoma patients treated with (chemo)radiotherapy	1
Short communication: abdominal infective native aortic aneurysm due to an unusual gram‐negative rod: beware of the dog!	1
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Novel human in vitro vegetation simulation model for infective endocarditis	1
High YAP and TEAD4 immunolabelings are associated with poor prognosis in patients with gallbladder cancer	0
Reply to “Comment on micro‐ and nanorobots for biofilm eradication”	0
Gastrointestinal dysbiosis and Escherichia coli pathobionts in inflammatory bowel diseases	0
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Activity of propyl‐propane‐thiosulfinate and propyl‐propane‐thiosulfonate against carbapenem‐resistant Gram‐negative bacteria	0
The criteria for chronic rhinosinusitis in children with cystic fibrosis are rarely fulfilled after initiation of CFTR modulator treatment	0
Clinicopathological and molecular characteristics of the alpha‐fetoprotein–producing gastric cancer: emphasis on two major subtypes	0
Cytokeratin 13 (CK13) expression in cancer: a tissue microarray study on 10,439 tumors	0
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Exploring the role of mesenchymal stem cells in modulating immune responses via Treg and Th2 cell activation: insights from mouse model of multiple sclerosis	0
Evaluation of the cross‐protection of the Vero cell‐derived attenuated influenza vaccines with compound adjuvant, through intranasal immunization	0
Tumor‐Derived Exosomes Enriched by miRNA‐211a Promote Antitumor Immune Response in B16F10 Tumor‐Bearing Mice	0
A systematic review and meta‐analysis: rising prevalence of colistin resistance in ICU‐acquired Gram‐negative bacteria	0
The infectious capacity of Enterococcus faecalis, Staphylococcus aureus, and Staphylococcus saprophyticus in a porcine model of urinary tract infection	0
Clinical implications of AGR2 in primary prostate cancer: Results from a large‐scale study	0
Preventive impact of probiotic supplements on heart injury and inflammatory indices in a rat model of myocardial infarction: histopathological and gene expression evaluation	0
Possible inhibition effects of resveratrol on pancreatic tumorigenesis in the azaserine‐rat model	0
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Clinical and Microbiological Characteristics of Hospitalized Adults Aged ≤ 45 Years With Clostridioides (Formerly Clostridium) difficile Infection: A Prospective Observational Coh	0
Evaluation of five different methods for diagnosis of Helicobacter pylori from fecal samples	0
High prevalence of pharyngeal bacterial pathogens among healthy adolescents and young adults	0
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Antizyme inhibitor 2 (AZIN2) associates with better prognosis of head and neck minor salivary gland adenoid cystic carcinoma	0
Centennial celebrations of the Danish Pasteur Society	0
Myositis ossificans mimicking bone surface osteosarcoma: case report with literature review	0
Female reproductive tract microbiome and early miscarriages	0
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Louis Pasteur and the birth of microbiology in Denmark	0