APMIS

Article	Citations
Routine use of MSI testing in colorectal cancer using a proposed algorithm	140
APMIS 2022 focus issue on human microbiome in disease and pathology	43
Issue Information	40
Misleading mental models: Ceci n’est pas un biofilm	38
A metatranscriptomic approach to explore longitudinal tissue specimens from non‐healing diabetes related foot ulcers	30
Aquaporins in pancreatic ductal adenocarcinoma	29
Immune responses to mRNA‐based vaccines given as a third COVID‐19 vaccine dose in people living with HIV—a literature review	26
Performance of automated antimicrobial susceptibility testing for the detection of antimicrobial resistance in gram‐negative bacteria: a NordicAST study	26
Bacterial invasion of the submicron osteocyte lacuna–canaliculi network (OLCN): a part of osteomyelitis disease biology	25
Fast processing of gynecologic cancer tissue in Danish Cancer Biobank makes them well‐suited for biomarker studies	21
Toll‐like receptors 3, 7, 8, and 9 in gastric cancer	20
Risk of orthopaedic implant infection during bacteraemia	20
Short communication: dog bite and back pain	19
Automated assessment of Ki‐67 proliferation index in neuroendocrine tumors by deep learning	19
Anti‐PD‐L1 chimeric antigen receptor natural killer cell: Characterization and functional analysis	18
Association of Toll‐like receptor 2 rs111200466 polymorphism with low serum levels of IL‐33 in early childhood	16
Issue Information	16
Bacterial aerobic respiration is a major consumer of oxygen in sputum from patients with acute lower respiratory tract infection	16
Aneurysmal bone cyst and osteoblastoma after neoadjuvant denosumab: histologic spectrum and potential diagnostic pitfalls	15
Dynamic distribution of systemically administered antibiotics in orthopeadically relevant target tissues and settings	14
Lactams Exhibit Potent Antifungal Activity Against Monospecies and Multispecies Interkingdom Biofilms on a Novel Hydrogel Skin Model	14
Effects of changes in SHP2 expression on liver fibrosis by influencing the apoptosis of hepatic stellate cells	14
Bacteriophage therapy and infective endocarditis – is it realistic?	13
Association of TLR4 polymorphisms (Asp299Gly and Thr399Ile) with sepsis: a meta‐analysis and trial sequence analysis	12
Estimated incidence of symptomatic Lyme borreliosis cases in five southern coastal counties in Norway, 2022	12

Tunneled Catheter‐Related Bloodstream Infections in Chronic Hemodialysis Patients: Frequency, Risk Factors, and Outcomes—A 10‐Year Analysis	11
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Injection site microflora in persons with diabetes: why needle reuse is not associated with increased infections?	11
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Characteristics of de novo cancer in liver transplant recipients	11
Exploring the immune‐modulating properties of boswellic acid in experimental autoimmune encephalomyelitis	10
Prevalence, molecular markers, and outcome of bronchial squamous carcinoma in situ in high‐risk subjects	10
Biomarkers for iron metabolism among patients hospitalized with community‐acquired pneumonia caused by infection with SARS‐CoV‐2, bacteria, and influenza	10
Importance of C24:2 sulfatide	10
Understanding the biofilm development of Acinetobacter baumannii and novel strategies to combat infection	10
High seroprevalence of SARS‐CoV‐2 antibodies in healthcare workers in COVID‐19 wards indicates an occupational hazard—a prospective cohort study during the first year of the	10
Inhibition of miR‐222‐3p Alleviates Acute Pancreatitis by Negatively Regulating the Expression of SIRT1	10
Prevalence of paediatric hyperinflammatory conditions in paediatric and adolescent hospitalized COVID‐19 patients: a systematic review and meta‐analysis	10
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Detection of Anti‐CMV TCR CDR3s via Blood and Tumor Exome Files Correlates With Increased Survival for Stomach Adenocarcinoma and Soft Tissue Sarcoma	9
New contributions on chronic low back pain: disc infection or contaminated cultures?	9
Antimicrobial susceptibility testing of bone and joint pathogens using isothermal microcalorimetry	9
The value of umbilical cord insertion site sampling in detecting maternal and/or fetal inflammatory response	9
Clinical characteristics and risk factors of connective tissue disease complicated with bronchiectasis and pulmonary infection	9
Our current clinical understanding of Candida biofilms: where are we two decades on?	9
Clinical Characteristics and Laboratory Diagnoses of Pediatric Patients Hospitalized During an Outbreak of Mycoplasma pneumoniae	9
Performance of PCR‐based syndromic testing compared to bacterial culture in patients with suspected pneumonia applying microscopy for quality assessment	9
Pan‐Cancer Analysis Reveals SKA3 as a Potential Diagnostic and Prognostic Biomarker	8
No Bacterial Biomass Detected in Tissue From Patients With Ovarian Cancer and Serous Tubal Intraepithelial Carcinomas Using 16S rDNA Sequencing	8
Inflammatory mediators in bacterial vaginosis: The role of cytokines	8
Prognostic Significance of Immunohistochemical Surrogate Molecular Sub‐Typing of Small Cell Lung Carcinoma	8
Growth factor expression is enhanced, and extracellular matrix proteins are depressed in healing skin wounds in septic patients compared with healthy controls	8
Immunohistochemical detection of double‐stranded RNA in formalin‐fixed paraffin‐embedded tissue	8
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Evaluating the Efficacy of Capreomycin and Levofloxacin Combination Therapy in Multidrug‐Resistant Tuberculosis Patients	7
Gene polymorphisms of TLR10: effects on bacterial meningitis outcomes in Angolan children	7
The use of core genome multilocus sequence typing to determine the duration of vancomycin‐resistant Enterococcus faecium outbreaks	7
Issue Information	7
Microbiological Analysis of Lower Airway Samples: Does It Influence the Outcome in Patients With Community‐Acquired Pneumonia?	7
STK11 mutation affects the killing effect of NK cells to promote the progression of lung adenocarcinoma	7
Dynamics of endemic human coronavirus and SARS‐CoV‐2 in a hospital of Madrid, Spain. Retrospective study from June 2020 to July 2023	7
Aquaporin‐1 in breast cancer	7
Undifferentiated–dedifferentiated endometrial carcinoma; the reappearance of an old friend with insights into the new data	7
RETRACTION: Molecular Diversity of the Planctomycetes in the Human Gut Microbiota in France and Senegal	7
Forssman and the staphylococcal hemolysins	7
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Staining pattern of specific and cross‐reacting Melan‐A antibodies: A comparative study on 15,840 samples from 133 human tumor types	6
Prevalence and characteristics of 11 potentially diarrhoeagenic microbes in asymptomatic individuals in Norway, 2015–2020	6
Molecular epidemiology of community‐ and hospital‐associated Clostridioides difficile infections in Jönköping, Sweden, October 2017 – March 2018	6
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Fungal positivity and other laboratory parameters in HIV‐ and non‐HIV‐related cryptococcal meningitis patients upon antifungal treatment	6
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Prevalence and Co‐Detection Rates of SARS‐CoV‐2, Influenza, and Respiratory Syncytial Virus: A Retrospective Analysis	6

Pathophysiological microenvironments in oral candidiasis	6
Viral intruders in the heart: A review of RNA viruses and their role in cardiac disorders	6
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Impact of Subcarinal Angle on Parenchymal Involvement and Disease Severity in COVID‐19 Pneumonia: A Retrospective Analysis	6
Inter‐observer agreement of tumor infiltrating lymphocytes in primary HER2‐positive breast cancer and correlation between tissue microarray and full tumor‐sections	6
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Azole resistance in Candida auris: mechanisms and combinatorial therapy	5
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PD‐L1 and PD‐1 expression in thyroid follicular epithelial dysplasia: Hashimoto thyroiditis related atypia and potential papillary carcinoma precursor	5
Mapping bacterial biofilm on explanted orthopedic hardware: An analysis of 14 consecutive cases	5
Intestinal metaplasia is a precursor lesion for sinonasal intestinal‐type adenocarcinoma: genomic investigation of a case proving this hypothesis	5
Antifungal drug resistance in Candida: a special emphasis on amphotericin B	5
How to Write a Pathology Research Paper—Basic Principles and Beyond—A Primer for Residents	5
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Antibiotic resistances of Pseudomonas aeruginosa and Acinetobacter baumannii in urine cultures: experience in a hospital of Southeast Spain	5
A novel fully human recombinant antibody neutralizing α‐hemolysin of Staphylococcus aureus	5
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Emergence and fixation of SARS‐CoV‐2 minority variants in a chronically infected patient receiving therapy in Denmark	4
Systematic Morphological Assesment of the Ascending Aorta Dissection: Application of Cardiovascular Pathology Consensus Statement in Tertiary Care Hospital in Finland	4
Diarrhoea‐causing microorganisms are rare in adult patients undergoing diagnostic laparoscopy for suspected appendicitis: a prospective observational cohort study	4
Humoral immune response of Galleria mellonella after mono‐ and co‐injection with Hypericum perforatum extract and Candida albicans	4
Peer‐to‐peer validation of Ki‐67 scoring in a pathology quality circle as a tool to assess interobserver variability: are we better than we thought?	4
Early Human Neutrophil Response to Different Morphotypes of Candida albicans Compared to Bacterial Pathogens	4
Antimicrobial resistance of Pseudomonas aeruginosa in a cystic fibrosis population after introduction of a novel cephalosporin/β‐lactamase inhibitor combination	4
Differences in gene expression despite identical histomorphology in sinonasal intestinal‐type adenocarcinoma and metastases from colorectal adenocarcinoma	4
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A unique case of Fusobacterium nucleatum spondylodiscitis communicating with a pleural empyema through a fistula	4
Rhinoviral Infection of the Human Lung Vascular Endothelium May Protect From the Secondary Infection With Rhinovirus RV‐16	4
RE: Aetiological profile of acute encephalitis syndrome in Assam, India, during a 4‐year period from 2019 to 2022	4
Tertiary lymphoid structures and gastric cancer prognosis	4
Circ_0006873 suppresses the osteogenic differentiation of human‐derived mesenchymal stem cells through mediating miR‐20a/SMURF2 axis in vitro	4
Infectious native aortic aneurysm with negative blood cultures: do not forget the pneumococcal urinary antigen test!	4
Editorial for PMI Journal 100‐Years Anniversary Focus Issue	4
Patients with tinea pedis and onychomycosis are more likely to use disinfectants when washing textiles than controls	4
Prognostic implications of the tumor immune microenvironment and immune checkpoint pathway in primary central nervous system diffuse large B‐cell lymphoma in the North Indian population	4
An insight on the eye bacterial microbiota and its role on dry eye disease	4
Mucosal microbiotas and their role in stem cell transplantation	4
The expression and prognostic relevance of CDH3 in tongue squamous cell carcinoma	3
Do mast cells contribute to the continued survival of vertebrates?	3
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Corrigendum	3
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In Vitro Activity of Antifungals in Combination With Meropenem or Daptomycin Against Dual Candida albicans–Bacterial Biofilms	3
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No evidence of increased anti‐M3 muscarinic acetylcholine receptor autoantibodies in SSA‐positive connective tissue disease patients	3
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Correction to “The relevance of ERG immunoexpression intensity for prostatic adenocarcinoma in radical prostatectomy of 635 samples”	3
Highly sensitive duplex MSI test and BAT40 germline polymorphism	3
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Historical concepts and contemporary perspectives of dental caries—a tribute to Henrik Dam (1895–1976)	3
Screening the Tocriscreen™ bioactive compound library in search for inhibitors of Candida biofilm formation	3
Nanomaterials and Candida auris: A Systematic Review of Emerging Strategies	3
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The microbiome in the pathogenesis of lung cancer	3
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Detection methods targeting the positive‐ and negative‐sense RNA transcripts from plus‐stranded RNA viruses	3
Anemia in liver transplant recipients: prevalence, severity, risk factors, and survival	2
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Elevated expression of the AIM2 gene in response to Helicobacter pylori along with the decrease of NLRC4 inflammasome is associated with peptic ulcer development	2
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Arthritis in Cystic Fibrosis—Comparison of a Single‐Center Cohort and Published Case Reports/Series and a Review of the Literature	2
Blocking coprophagy increases the levels of inflammation and depression in healthy mice as well as mice receiving fecal microbiota transplantation from disease model mice donors	2
BUB1 predicts poor prognosis and immune status in liver hepatocellular carcinoma	2
Beta‐cell activity and development of Type 1 diabetes	2
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Dynamics of skin microbiota in shoulder surgery infections	2
Predicting the clinical efficacy of JAK inhibitor treatment for patients with rheumatoid arthritis based on Fas+ T cell subsets	2
The EUCAST Disk Diffusion Method for Antimicrobial Susceptibility Testing of Oral Anaerobes	2
Systematic review on the current knowledge and use of single‐cell RNA sequencing in head and neck cancer	2
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The expression of keratin 17 and p27 predicts clinical outcomes in colorectal cancer	2

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Aquaporin‐5 in breast cancer	2
Rapid identification of SARS‐CoV‐2 variants using stable high‐frequency mutation sites	2
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Short communication: first case of bacteraemia caused by Dielma fastidiosa in a patient hospitalized with diverticulitis	2
Novel sampling technique maintaining the two‐dimensional organization of microbes during cultivation from chronic wounds: The Imprint method	2
Dynamics of a Staphylococcus aureus infective endocarditis simulation model	2
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Evaluation of transcription factors and cytokine expressions of T‐cell subsets in CD19 deficiency and their possible relationship with autoimmune disease	2
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In vitro determination of the susceptibility of Malassezia furfur biofilm to different commercially used antimicrobials	2
Celebrating a century of APMIS: a legacy of pathology, microbiology, and immunology	2
Study of humoral and cellular immunity in vaccinated with mRNA‐1273	2
Metabolic syndrome, soluble CD40L, and biomarkers of endothelial dysfunction in people living with HIV	2
Web‐grading—a tool to test personal grading of renal and prostate cancer	2
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HERC5: a comprehensive in silico analysis of its diagnostic, prognostic, and therapeutic potential in cancer	2
Good's syndrome: brief overview of an enigmatic immune deficiency	2
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Examining the Role of Virulence Proteins From Pathogenic Anaerobes in the Initiation of Colorectal Cancer	2
Enhancing PMMA Cements With Manually Added Antimicrobial Agents	2
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Performance of Short‐Term Culture and Direct MALDI‐TOF MS for Identification of Candida Species From Blood Cultures	1
Potential impact of the COVID‐19 pandemic on the national and regional incidence, epidemiology and diagnostic testing of chlamydia and gonorrhoea in Sweden, 2020	1
The impact of preoperative treatments on the immune environment of rectal cancer	1
Shiga toxin‐producing Escherichia coli (STEC) stool multiplex PCR can replace culture for clinical diagnosis and follow‐up	1
Virology and safety profile of Molnupiravir at three different doses for treatment of SARS‐CoV‐2: a systematic review and meta‐analysis	1
Louis Pasteur—The life of a controversial scientist with a prepared mind, driven by curiosity, motivation, and competition	1
Is clindamycin a potential treatment for prostatitis?	1
Increased sputum lactate during oral glucose tolerance test in cystic fibrosis	1
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Expression of toll‐like receptors in recurrent pleomorphic adenoma and carcinoma ex pleomorphic adenoma	1
APMIS focus issue 2024—The microenvironment in human disease	1
Whole genome sequencing reveals two genetically distinct MRSA outbreaks among people who inject drugs and homeless people in Copenhagen	1
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Application of computer‐generated images to train pattern recognition used in semiquantitative immunohistochemistry scoring	1
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Weight‐based cefuroxime dosing provides comparable orthopedic target tissue concentrations between weight groups – a microdialysis porcine study	1
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Investigating the role of Candida albicans as a universal substrate for oral bacteria using a transcriptomic approach: implications for interkingdom biofilm control?	1
Analysis of the correlation between P27 expression and Helicobacter pylori infection in gastric cancer	1
An Evaluation Into the Robustness of Grading of Pleural Mesothelioma Outside of Specialist Centres	1
Prognostic impact of subepithelial Helicobacter pylori infection on clinical outcomes in patients with dyspepsia	1
Pathological image profiling identifies onco‐microbial, tumor immune microenvironment, and prognostic subtypes of colorectal cancer	1
Short communication: abdominal infective native aortic aneurysm due to an unusual gram‐negative rod: beware of the dog!	1
Are we ready for translational research based on material and data from the Danish CancerBiobank and can we gain new knowledge from biobank registration?	1
Withdrawal	1
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Close monitoring and early intervention: management principles for cystic fibrosis in Denmark	1
Novel human in vitro vegetation simulation model for infective endocarditis	1
Detection and characterization of HIV‐1 group O and HIV‐2 in the Central African Republic	1
Stage‐related increase in PIM2 expression in mycosis fungoides	1
Current and novel diagnostics for orthopedic implant biofilm infections: a review	1
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Unravelling the intricacies of Porphyromonas gingivalis: virulence factors, lifecycle dynamics and phytochemical interventions for periodontal disease management	1
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Real‐world data confirm elexacftor/tezacaftor/ivacaftor modulators halves sweat chloride concentration in eligible people with cystic fibrosis	1
Echinacoside attenuates Klebsiella pneumoniae‐induced pneumonia via inhibition of the TLR4/NF‐κB signaling	1
Host‐microbe metatranscriptome reveals differences between acute and chronic infections in diabetes‐related foot ulcers	1
PD‐L1 expression and FGFR‐mutations among Danish patients diagnosed with metastatic urothelial carcinoma: A retrospective and descriptive study	1
Single cells and bacterial biofilm populations in chronic wound infections	1
Peritumoral histopathologic findings in patients with chronic viral hepatitis‐associated hepatocellular carcinoma	1
Long‐term disease course, cost and prognosis of inflammatory bowel disease: epidemiological studies of a European and a Danish inception cohort	1
Antigen Specificity: A Fluctuating Aspect in the Development of Clinical Antibodies?	1
HIV‐associated infective native aortic aneurysms	1
Cranberry‐lingonberry juice affects the gut and urinary microbiome in children ‐ a randomized controlled trial	1
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Primary skin abscess microbiota a systematic review	1
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Prognostic histological markers in oral tongue squamous cell carcinoma patients treated with (chemo)radiotherapy	1
IGSF3 tissue expression in squamous cell carcinoma of the oropharynx: a novel tool for prognosis assessment in HPV‐related and HPV‐unrelated disease	1
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High YAP and TEAD4 immunolabelings are associated with poor prognosis in patients with gallbladder cancer	0
Centennial celebrations of the Danish Pasteur Society	0
Autoimmune vulnerability of beta versus alpha cells might be due to increased 2′,5′ synthetase	0
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Activity of propyl‐propane‐thiosulfinate and propyl‐propane‐thiosulfonate against carbapenem‐resistant Gram‐negative bacteria	0
Reply to “Comment on micro‐ and nanorobots for biofilm eradication”	0
Tumor‐Derived Exosomes Enriched by miRNA‐211a Promote Antitumor Immune Response in B16F10 Tumor‐Bearing Mice	0
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Clinical and Microbiological Characteristics of Hospitalized Adults Aged ≤ 45 Years With Clostridioides (Formerly Clostridium) difficile Infection: A Prospective Observational Coh	0
Immunohistochemical somatostatin receptor expression in insulinomas	0
Louis Pasteur and the birth of microbiology in Denmark	0
Exploring the role of mesenchymal stem cells in modulating immune responses via Treg and Th2 cell activation: insights from mouse model of multiple sclerosis	0
Evaluation of the cross‐protection of the Vero cell‐derived attenuated influenza vaccines with compound adjuvant, through intranasal immunization	0
Exploring the significance of microbiota metabolites in rheumatoid arthritis: uncovering their contribution from disease development to biomarker potential	0
High prevalence of pharyngeal bacterial pathogens among healthy adolescents and young adults	0
The infectious capacity of Enterococcus faecalis, Staphylococcus aureus, and Staphylococcus saprophyticus in a porcine model of urinary tract infection	0
Myositis ossificans mimicking bone surface osteosarcoma: case report with literature review	0
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The criteria for chronic rhinosinusitis in children with cystic fibrosis are rarely fulfilled after initiation of CFTR modulator treatment	0
Female reproductive tract microbiome and early miscarriages	0