APMIS

Article	Citations
Issue Information	159
APMIS 2022 focus issue on human microbiome in disease and pathology	46
Routine use of MSI testing in colorectal cancer using a proposed algorithm	41
Fast processing of gynecologic cancer tissue in Danish Cancer Biobank makes them well‐suited for biomarker studies	40
Risk of orthopaedic implant infection during bacteraemia	32
Toll‐like receptors 3, 7, 8, and 9 in gastric cancer	31
Immune responses to mRNA‐based vaccines given as a third COVID‐19 vaccine dose in people living with HIV—a literature review	27
A metatranscriptomic approach to explore longitudinal tissue specimens from non‐healing diabetes related foot ulcers	26
Bacterial invasion of the submicron osteocyte lacuna–canaliculi network (OLCN): a part of osteomyelitis disease biology	24
Automated assessment of Ki‐67 proliferation index in neuroendocrine tumors by deep learning	23
Performance of automated antimicrobial susceptibility testing for the detection of antimicrobial resistance in gram‐negative bacteria: a NordicAST study	21
Bacterial aerobic respiration is a major consumer of oxygen in sputum from patients with acute lower respiratory tract infection	20
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Association of Toll‐like receptor 2 rs111200466 polymorphism with low serum levels of IL‐33 in early childhood	20
Lactams Exhibit Potent Antifungal Activity Against Monospecies and Multispecies Interkingdom Biofilms on a Novel Hydrogel Skin Model	19
Bacteriophage therapy and infective endocarditis – is it realistic?	17
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Association of TLR4 polymorphisms (Asp299Gly and Thr399Ile) with sepsis: a meta‐analysis and trial sequence analysis	16
Aneurysmal bone cyst and osteoblastoma after neoadjuvant denosumab: histologic spectrum and potential diagnostic pitfalls	16
Effects of changes in SHP2 expression on liver fibrosis by influencing the apoptosis of hepatic stellate cells	15
Injection site microflora in persons with diabetes: why needle reuse is not associated with increased infections?	14
Estimated incidence of symptomatic Lyme borreliosis cases in five southern coastal counties in Norway, 2022	14
Anti‐PD‐L1 chimeric antigen receptor natural killer cell: Characterization and functional analysis	13
Short communication: dog bite and back pain	13
Dynamic distribution of systemically administered antibiotics in orthopeadically relevant target tissues and settings	13

Tunneled Catheter‐Related Bloodstream Infections in Chronic Hemodialysis Patients: Frequency, Risk Factors, and Outcomes—A 10‐Year Analysis	12
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Importance of C24:2 sulfatide	11
Inhibition of miR‐222‐3p Alleviates Acute Pancreatitis by Negatively Regulating the Expression of SIRT1	11
Exploring the immune‐modulating properties of boswellic acid in experimental autoimmune encephalomyelitis	11
Characteristics of de novo cancer in liver transplant recipients	11
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Understanding the biofilm development of Acinetobacter baumannii and novel strategies to combat infection	11
Prevalence of paediatric hyperinflammatory conditions in paediatric and adolescent hospitalized COVID‐19 patients: a systematic review and meta‐analysis	11
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Performance of PCR‐based syndromic testing compared to bacterial culture in patients with suspected pneumonia applying microscopy for quality assessment	10
Prevalence, molecular markers, and outcome of bronchial squamous carcinoma in situ in high‐risk subjects	10
Clinical characteristics and risk factors of connective tissue disease complicated with bronchiectasis and pulmonary infection	10
High seroprevalence of SARS‐CoV‐2 antibodies in healthcare workers in COVID‐19 wards indicates an occupational hazard—a prospective cohort study during the first year of the	10
Biomarkers for iron metabolism among patients hospitalized with community‐acquired pneumonia caused by infection with SARS‐CoV‐2, bacteria, and influenza	10
Detection of Anti‐CMV TCR CDR3s via Blood and Tumor Exome Files Correlates With Increased Survival for Stomach Adenocarcinoma and Soft Tissue Sarcoma	9
Antimicrobial susceptibility testing of bone and joint pathogens using isothermal microcalorimetry	9
Pan‐Cancer Analysis Reveals SKA3 as a Potential Diagnostic and Prognostic Biomarker	9
The value of umbilical cord insertion site sampling in detecting maternal and/or fetal inflammatory response	9
New contributions on chronic low back pain: disc infection or contaminated cultures?	9
No Bacterial Biomass Detected in Tissue From Patients With Ovarian Cancer and Serous Tubal Intraepithelial Carcinomas Using 16S rDNA Sequencing	9
Clinical Characteristics and Laboratory Diagnoses of Pediatric Patients Hospitalized During an Outbreak of Mycoplasma pneumoniae	9
Growth factor expression is enhanced, and extracellular matrix proteins are depressed in healing skin wounds in septic patients compared with healthy controls	8
Prognostic Significance of Immunohistochemical Surrogate Molecular Sub‐Typing of Small Cell Lung Carcinoma	8
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Immunohistochemical detection of double‐stranded RNA in formalin‐fixed paraffin‐embedded tissue	8
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Inflammatory mediators in bacterial vaginosis: The role of cytokines	8
Our current clinical understanding of Candida biofilms: where are we two decades on?	8
Evaluating the Efficacy of Capreomycin and Levofloxacin Combination Therapy in Multidrug‐Resistant Tuberculosis Patients	7
Forssman and the staphylococcal hemolysins	7
Dynamics of endemic human coronavirus and SARS‐CoV‐2 in a hospital of Madrid, Spain. Retrospective study from June 2020 to July 2023	7
Undifferentiated–dedifferentiated endometrial carcinoma; the reappearance of an old friend with insights into the new data	7
The use of core genome multilocus sequence typing to determine the duration of vancomycin‐resistant Enterococcus faecium outbreaks	7
Fungal positivity and other laboratory parameters in HIV‐ and non‐HIV‐related cryptococcal meningitis patients upon antifungal treatment	7
Aquaporin‐1 in breast cancer	7
Microbiological Analysis of Lower Airway Samples: Does It Influence the Outcome in Patients With Community‐Acquired Pneumonia?	7
STK11 mutation affects the killing effect of NK cells to promote the progression of lung adenocarcinoma	7
Viral intruders in the heart: A review of RNA viruses and their role in cardiac disorders	7
RETRACTION: Molecular Diversity of the Planctomycetes in the Human Gut Microbiota in France and Senegal	7
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Gene polymorphisms of TLR10: effects on bacterial meningitis outcomes in Angolan children	6
Prevalence and characteristics of 11 potentially diarrhoeagenic microbes in asymptomatic individuals in Norway, 2015–2020	6
Impact of Subcarinal Angle on Parenchymal Involvement and Disease Severity in COVID‐19 Pneumonia: A Retrospective Analysis	6
How to Write a Pathology Research Paper—Basic Principles and Beyond—A Primer for Residents	6
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Staining pattern of specific and cross‐reacting Melan‐A antibodies: A comparative study on 15,840 samples from 133 human tumor types	6
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Inter‐observer agreement of tumor infiltrating lymphocytes in primary HER2‐positive breast cancer and correlation between tissue microarray and full tumor‐sections	6
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Prevalence and Co‐Detection Rates of SARS‐CoV‐2, Influenza, and Respiratory Syncytial Virus: A Retrospective Analysis	6
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Azole resistance in Candida auris: mechanisms and combinatorial therapy	6
Mapping bacterial biofilm on explanted orthopedic hardware: An analysis of 14 consecutive cases	6
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Molecular epidemiology of community‐ and hospital‐associated Clostridioides difficile infections in Jönköping, Sweden, October 2017 – March 2018	5
A novel fully human recombinant antibody neutralizing α‐hemolysin of Staphylococcus aureus	5
Differences in gene expression despite identical histomorphology in sinonasal intestinal‐type adenocarcinoma and metastases from colorectal adenocarcinoma	5
Antibiotic resistances of Pseudomonas aeruginosa and Acinetobacter baumannii in urine cultures: experience in a hospital of Southeast Spain	5
Intestinal metaplasia is a precursor lesion for sinonasal intestinal‐type adenocarcinoma: genomic investigation of a case proving this hypothesis	5
Antifungal drug resistance in Candida: a special emphasis on amphotericin B	5
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Antimicrobial resistance of Pseudomonas aeruginosa in a cystic fibrosis population after introduction of a novel cephalosporin/β‐lactamase inhibitor combination	5
Pathophysiological microenvironments in oral candidiasis	5
Circ_0006873 suppresses the osteogenic differentiation of human‐derived mesenchymal stem cells through mediating miR‐20a/SMURF2 axis in vitro	5
PD‐L1 and PD‐1 expression in thyroid follicular epithelial dysplasia: Hashimoto thyroiditis related atypia and potential papillary carcinoma precursor	5
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Early Human Neutrophil Response to Different Morphotypes of Candida albicans Compared to Bacterial Pathogens	4
Diarrhoea‐causing microorganisms are rare in adult patients undergoing diagnostic laparoscopy for suspected appendicitis: a prospective observational cohort study	4
Systematic Morphological Assesment of the Ascending Aorta Dissection: Application of Cardiovascular Pathology Consensus Statement in Tertiary Care Hospital in Finland	4
Prognostic implications of the tumor immune microenvironment and immune checkpoint pathway in primary central nervous system diffuse large B‐cell lymphoma in the North Indian population	4
Rhinoviral Infection of the Human Lung Vascular Endothelium May Protect From the Secondary Infection With Rhinovirus RV‐16	4
The microbiome in the pathogenesis of lung cancer	4
Mucosal microbiotas and their role in stem cell transplantation	4
Patients with tinea pedis and onychomycosis are more likely to use disinfectants when washing textiles than controls	4
Infectious native aortic aneurysm with negative blood cultures: do not forget the pneumococcal urinary antigen test!	4
Emergence and fixation of SARS‐CoV‐2 minority variants in a chronically infected patient receiving therapy in Denmark	4
RE: Aetiological profile of acute encephalitis syndrome in Assam, India, during a 4‐year period from 2019 to 2022	4
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Tertiary lymphoid structures and gastric cancer prognosis	4
Humoral immune response of Galleria mellonella after mono‐ and co‐injection with Hypericum perforatum extract and Candida albicans	4
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Editorial for PMI Journal 100‐Years Anniversary Focus Issue	4
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An insight on the eye bacterial microbiota and its role on dry eye disease	4
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Combination of Isoliquiritigenin and Vancomycin Alleviates Staphylococcus aureus‐Induced Bone Infection in Rats	4
Peer‐to‐peer validation of Ki‐67 scoring in a pathology quality circle as a tool to assess interobserver variability: are we better than we thought?	4
Nanomaterials and Candida auris: A Systematic Review of Emerging Strategies	3
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Correction to “The relevance of ERG immunoexpression intensity for prostatic adenocarcinoma in radical prostatectomy of 635 samples”	3
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In Vitro Activity of Antifungals in Combination With Meropenem or Daptomycin Against Dual Candida albicans–Bacterial Biofilms	3
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Detection methods targeting the positive‐ and negative‐sense RNA transcripts from plus‐stranded RNA viruses	3
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Do mast cells contribute to the continued survival of vertebrates?	3
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The expression and prognostic relevance of CDH3 in tongue squamous cell carcinoma	3
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Corrigendum	3
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No evidence of increased anti‐M3 muscarinic acetylcholine receptor autoantibodies in SSA‐positive connective tissue disease patients	3
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Screening the Tocriscreen™ bioactive compound library in search for inhibitors of Candida biofilm formation	3
Historical concepts and contemporary perspectives of dental caries—a tribute to Henrik Dam (1895–1976)	3
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Beta‐cell activity and development of Type 1 diabetes	3
Evaluation of transcription factors and cytokine expressions of T‐cell subsets in CD19 deficiency and their possible relationship with autoimmune disease	2
Enhancing PMMA Cements With Manually Added Antimicrobial Agents	2
Good's syndrome: brief overview of an enigmatic immune deficiency	2
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Elevated expression of the AIM2 gene in response to Helicobacter pylori along with the decrease of NLRC4 inflammasome is associated with peptic ulcer development	2
Arthritis in Cystic Fibrosis—Comparison of a Single‐Center Cohort and Published Case Reports/Series and a Review of the Literature	2
The expression of keratin 17 and p27 predicts clinical outcomes in colorectal cancer	2
Role of Toll‐Like Receptors in Myeloid Neoplasms: Focuses on the Molecular Mechanisms and Clinical Impact on Myelodysplastic Syndromes, Acute Myeloid Leukemia, and Chronic Myeloid Leukemia	2
Short communication: first case of bacteraemia caused by Dielma fastidiosa in a patient hospitalized with diverticulitis	2
Issue Information	2
Celebrating a century of APMIS: a legacy of pathology, microbiology, and immunology	2
Application of computer‐generated images to train pattern recognition used in semiquantitative immunohistochemistry scoring	2
Expression of toll‐like receptors in recurrent pleomorphic adenoma and carcinoma ex pleomorphic adenoma	2
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Predicting the clinical efficacy of JAK inhibitor treatment for patients with rheumatoid arthritis based on Fas+ T cell subsets	2

Aquaporin‐5 in breast cancer	2
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Rapid identification of SARS‐CoV‐2 variants using stable high‐frequency mutation sites	2
Blocking coprophagy increases the levels of inflammation and depression in healthy mice as well as mice receiving fecal microbiota transplantation from disease model mice donors	2
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Metagenomic Characterization of Biofilm and Suspended Microbial Communities in a Hybrid Algal Turf Scrubber‐Based Wastewater Treatment System	2
Examining the Role of Virulence Proteins From Pathogenic Anaerobes in the Initiation of Colorectal Cancer	2
HERC5: a comprehensive in silico analysis of its diagnostic, prognostic, and therapeutic potential in cancer	2
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Primary skin abscess microbiota a systematic review	2
The EUCAST Disk Diffusion Method for Antimicrobial Susceptibility Testing of Oral Anaerobes	2
Anemia in liver transplant recipients: prevalence, severity, risk factors, and survival	2
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Study of humoral and cellular immunity in vaccinated with mRNA‐1273	2
Metabolic syndrome, soluble CD40L, and biomarkers of endothelial dysfunction in people living with HIV	2
Novel sampling technique maintaining the two‐dimensional organization of microbes during cultivation from chronic wounds: The Imprint method	2
Web‐grading—a tool to test personal grading of renal and prostate cancer	2
BUB1 predicts poor prognosis and immune status in liver hepatocellular carcinoma	2
In vitro determination of the susceptibility of Malassezia furfur biofilm to different commercially used antimicrobials	2
Dynamics of a Staphylococcus aureus infective endocarditis simulation model	2
IGSF3 tissue expression in squamous cell carcinoma of the oropharynx: a novel tool for prognosis assessment in HPV‐related and HPV‐unrelated disease	2
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Withdrawal	1
Louis Pasteur—The life of a controversial scientist with a prepared mind, driven by curiosity, motivation, and competition	1
Close monitoring and early intervention: management principles for cystic fibrosis in Denmark	1
Real‐world data confirm elexacftor/tezacaftor/ivacaftor modulators halves sweat chloride concentration in eligible people with cystic fibrosis	1
Stage‐related increase in PIM2 expression in mycosis fungoides	1
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Current and novel diagnostics for orthopedic implant biofilm infections: a review	1
Appraisal of the PathoDiscovery: an interactive web‐based educational tool for teaching pathophysiology and histopathology	1
Single cells and bacterial biofilm populations in chronic wound infections	1
Long‐term disease course, cost and prognosis of inflammatory bowel disease: epidemiological studies of a European and a Danish inception cohort	1
Predicting Therapeutic Response to Molecular Hydrogen in Autoimmune Diseases via Immunophenotyping	1
APMIS focus issue 2024—The microenvironment in human disease	1
Diagnostic performance of patient self‐collected oral swab (tongue and cheek) in comparison with healthcare worker‐collected nasopharyngeal swab for severe acute respiratory syndrome coronavirus‐2 det	1
Host‐microbe metatranscriptome reveals differences between acute and chronic infections in diabetes‐related foot ulcers	1
Fourier‐transform infrared spectroscopy imaging is a useful adjunct to routine histopathology to identify failure of polyethylene inlays in revision total hip arthroplasty	1
Unravelling the intricacies of Porphyromonas gingivalis: virulence factors, lifecycle dynamics and phytochemical interventions for periodontal disease management	1
Potential impact of the COVID‐19 pandemic on the national and regional incidence, epidemiology and diagnostic testing of chlamydia and gonorrhoea in Sweden, 2020	1
Short communication: abdominal infective native aortic aneurysm due to an unusual gram‐negative rod: beware of the dog!	1
Weight‐based cefuroxime dosing provides comparable orthopedic target tissue concentrations between weight groups – a microdialysis porcine study	1
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Shiga toxin‐producing Escherichia coli (STEC) stool multiplex PCR can replace culture for clinical diagnosis and follow‐up	1
Cranberry‐lingonberry juice affects the gut and urinary microbiome in children ‐ a randomized controlled trial	1
Are we ready for translational research based on material and data from the Danish CancerBiobank and can we gain new knowledge from biobank registration?	1
Detection and characterization of HIV‐1 group O and HIV‐2 in the Central African Republic	1
Polyphyllin I, a strong antifungal compound against Candida albicans	1
Vaginal microecology and its role in human papillomavirus infection and human papillomavirus associated cervical lesions	1
APMIS focus issue 2023—fungal infections: diagnostics and therapeutics	1
Virology and safety profile of Molnupiravir at three different doses for treatment of SARS‐CoV‐2: a systematic review and meta‐analysis	1
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Performance of Short‐Term Culture and Direct MALDI‐TOF MS for Identification of Candida Species From Blood Cultures	1
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PD‐L1 expression and FGFR‐mutations among Danish patients diagnosed with metastatic urothelial carcinoma: A retrospective and descriptive study	1
Kefir Grains in Self‐Assembled Nanofibrils: Structural Role and Nutritional Applications	1
Investigating the role of Candida albicans as a universal substrate for oral bacteria using a transcriptomic approach: implications for interkingdom biofilm control?	1
Is clindamycin a potential treatment for prostatitis?	1
An Evaluation Into the Robustness of Grading of Pleural Mesothelioma Outside of Specialist Centres	1
Prognostic histological markers in oral tongue squamous cell carcinoma patients treated with (chemo)radiotherapy	1
Pathological image profiling identifies onco‐microbial, tumor immune microenvironment, and prognostic subtypes of colorectal cancer	1
Whole genome sequencing reveals two genetically distinct MRSA outbreaks among people who inject drugs and homeless people in Copenhagen	1
Prognostic impact of subepithelial Helicobacter pylori infection on clinical outcomes in patients with dyspepsia	1
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The autonomic nerves around the vein of Marshall: a postmortem study with clinical implications	1
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Human lung vascular endothelium may limit infection with HRV16viaIFN‐β‐dependent mechanisms	1
Analysis of the correlation between P27 expression and Helicobacter pylori infection in gastric cancer	1
Antigen Specificity: A Fluctuating Aspect in the Development of Clinical Antibodies?	1
Impact of extracellular enzymes on Staphylococcus aureus host tissue adaptation and infection	1
Increased sputum lactate during oral glucose tolerance test in cystic fibrosis	1
Peritumoral histopathologic findings in patients with chronic viral hepatitis‐associated hepatocellular carcinoma	1
HIV‐associated infective native aortic aneurysms	1
Echinacoside attenuates Klebsiella pneumoniae‐induced pneumonia via inhibition of the TLR4/NF‐κB signaling	1
The impact of preoperative treatments on the immune environment of rectal cancer	1
Bile Acids and Bile Acid Metabolites in the Activation and Inhibition of Pyroptotic Cell Death, Influencing Inflammation	1