Virus Genes

Article	Citations
Immune response induced by recombinant pres2/S-protein and a pres2-S-protein fused with a core 18-27 antigen fragment of hepatitis B virus compared to conventional HBV vaccine	75
Characterization of the functional domains of nuclear shuttle protein (NSP) of Indian cassava mosaic virus using green fluorescent protein as reporter	70
The genetic and biological characterization of the first avian paramyxovirus serotype 14 isolated from chicken in China	37
Complete genome sequence of malva-associated soymovirus 1: a novel virus infecting common mallow	22
Correction: First reports of several viruses and a viroid including a novel vitivirus in Japan, found through virome analysis of bulk grape genetic resources	21
The H5N1-NS1 protein affects the host cell cycle and apoptosis through interaction with the host lncRNA PIK3CD-AS2	19
Antiviral siRNA delivered using attenuated, anthrax toxin protects cells from the cytopathic effects of Zika virus	19
Whole-genome characterization of Newcastle disease virus isolates of sub-genotype VII.1.1 from chickens in Ethiopia	17
Identification and whole-genome characterization of a novel equine papillomavirus	17
Aborted infection of human sodium taurocholate cotransporting polypeptide (hNTCP) expressing woodchuck hepatocytes with hepatitis B virus (HBV)	16
New lytic and new temperate Staphylococcus hyicus phages	15
Domestic cat hepadnavirus genotype B is present in Southern Brazil	15
Genome sequence analysis of H7N3 subtype avian influenza virus originated from wild birds and its potential infectivity in mice	15
Bioinformatic identification of monkeypox virus phylogenetic gene trees that are representative of its whole-genome phylogenetic tree	14
MiR-339-5p inhibits replication of porcine reproductive and respiratory syndrome virus by targeting viral gene regions	13
Sequence analysis of the Spike, RNA-dependent RNA polymerase, and protease genes reveals a distinct evolutionary pattern of SARS-CoV-2 variants circulating in Yogyakarta and Central Java provinces, In	13
Lineage and sublineage analysis of human papillomavirus types 51 and 59 in Iranian women	12
Molecular characterization of a novel variant of infectious bronchitis virus from field outbreaks in backyard chicken population of North East India	12
First detection and diversity of astroviruses in wild migratory birds of Sakhalin Island, North Pacific	12
Complete genome sequence analysis and biological characteristics of Newcastle disease viruses from different hosts in China	12
Co-circulation of two Mumps virus genotypes in Assam, India	12
Nuclear respiratory factor 1 promotes the progression of EBV-associated gastric cancer and maintains EBV latent infection	11
Characterization of two novel fusariviruses co-infecting a single isolate of phytopathogenic fungus Botrytis cinerea	11
Aedes aegypti Totivirus identified in mosquitoes in the Brazilian Amazon region	10
Comparative genomics and evolutionary analysis of dengue virus strains circulating in Pakistan	10

Gushan virus: a newly discovered virus found in mosquitoes of Shandong, China	10
Characterization of a breakthrough vaccine escape strain associated with overt hepatitis B virus infection	10
Transient expression analysis of promoters of okra enation leaf curl virus in Nicotiana benthamiana, cotton and okra plants	9
Correction to: Characterization of the first Rubus yellow net virus genome from blackberry	9
Exploration of plant transcriptomes reveals five putative novel poleroviruses and an enamovirus	9
Characterization and genomic analysis of a novel bacteriophage BUCT_49532 lysing Klebsiella pneumoniae	9
RNA sequencing of avian paramyxovirus (Paramyxoviridae, Avulavirinae) isolates from wild mallards in Belgium, 2021: complete genomes and coinfections	9
Genotypic characterization of Japanese encephalitis virus circulating in swine population of India: Genotype-III still in dominance	9
Mutations in the S gene of hepatitis B virus in three generations of patients with chronic hepatitis B	9
Pan-serotype reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay targeting 2B-NSP coding region for colorimetric detection of foot-and-mouth disease virus in clinical samples	9
Insights of HIV-1 and HBV transcriptional regulation by viral transactivator Tat and HBx	9
Whole genome sequencing and evolution analyses of Human metapneumovirus	9
Isolation, characterization, and genomic analysis of vB_PaeS_TUMS_P81, a lytic bacteriophage against Pseudomonas aeruginosa	8
VP7, VP4, and NSP4 genes of species a rotaviruses isolated from sewage in Nigeria, 2014/2015: partial sequence characterization and biophysical analysis of NSP4 (enterotoxin)	8
Increased virulence of a novel reassortant H1N3 avian influenza virus in mice as a result of adaptive amino acid substitutions	8
The genome evolution of Marek’s disease viruses in chickens and turkeys in China	8
Isolation and genomic characterization of a cypovirus from Clanis bilineata	8
Complete genome sequence of Xanthomonas phage M29, a new member of Foxunavirus isolated in the Czech Republic	8
Discovery and genome analysis of Yunxiao leafhopper virus 1 in Recilia dorsalis	7
Leucoma salicis nucleopolyhedrovirus (LesaNPV) genome sequence shed new light on the origin of the Alphabaculovirus orpseudotsugatae species	7
Duck sewage source coliphage P762 can lyse STEC and APEC	7
Whole-genome characterization of avian picornaviruses from diarrheic broiler chickens co-infected with multiple picornaviruses in Iran	7
Detectable episodic positive selection in the virion strand a-strain Maize streak virus genes may have a role in its host adaptation	7
Characterization of Phietavirus Henu 2 in the virome of individuals with acute gastroenteritis	7
Cucumber mosaic virus infection does not increase the translocation of the green fluorescent protein from GM rootstock to non-GM scion in transgrafted plants	7
Molecular characterization and genetic analysis of highly pathogenic H5N1 clade 2.3.4.4b in seagulls from Dukan Lake, Iraq	7
Phylogenetic analysis of porcine reproductive and respiratory syndrome virus in Vietnam, 2021	7
Whole genome sequencing and genomic characterization of a DS-1-like G2P[4] group A rotavirus in Japan	7
Molecular and phylogenetic analysis of influenza A and B viruses circulating in Sri Lanka following the COVID-19 pandemic	7
The complete genomic sequence of Magnaporthe oryzae polymycovirus 1	7
RNA-viromics unveils diverse RNA viral communities in Large-billed crows and Northern Ravens	6
A new polymycovirus infecting a clinical isolate of the entomopathogenic and fungicolous fungus Lecanicillium aphanocladii affects pigmentation, sporulation, and antifungal susceptibility of its host	6
Association of RBD mutations with COVID-19 disease severity in the Iranian population	6
Hantavirus Brno loanvirus is highly specific to the common noctule bat (Nyctalus noctula) and widespread in Central Europe	6
Long non-coding RNA C1RL-AS1 aggravates influenza A virus pneumonia through miR-16-5p/LAMP3	6
SCD1 inhibits HBV replication by regulating autophagy under high lipid conditions	6
The complete genome of equid herpesvirus-1 (EHV-1) field isolates from Argentina reveals an interspecific recombinant strain	6
Correction: Elevated oncogene expressions in koala infected with multiple koala retrovirus subtypes: a preliminary study	6
Characterization of two novel reassortant bluetongue virus serotype 1 strains isolated from farmed white-tailed deer (Odocoileus virginianus) in Florida, USA	6
Reverse transcription recombinase-aided amplification assay for avian influenza virus	6
A virus from Aspergillus cibarius with features of alpha- and betachrysoviruses	6
Muramidase, nuclease, or hypothetical protein genes intervene between paired genes encoding DNA packaging terminase and portal proteins in Wolbachia phages and prophages	6
The arrival of highly pathogenic avian influenza viruses H5N8 in Iran through two windows, 2016	5
Characterization of the first Rubus yellow net virus genome from blackberry	5
Characterization and genome analysis of Klebsiella phages with lytic activity against Klebsiella pneumoniae	5
Foreign gene expression attenuates a virulent Newcastle disease virus in chickens	5
Phylogenetic analysis and molecular genetic characteristics of West Nile virus lineage 2 isolates circulating in the Russian Federation	5
Genetic characteristics of a novel HIV-1 recombinant lineage (CRF103_01B) and its prevalence in northern China	5
Correction: The complete genomic sequence of Magnaporthe oryzae polymycovirus 1	5
Genetic analysis of human parainfluenza type 2 virus in Riyadh, Saudi Arabia	5

One-step SYBR green-based real-time RT-PCR assay for detection of foot-and-mouth disease virus circulating in India	4
Antibacterial effects of single phage and phage cocktail against multidrug-resistant Klebsiella pneumoniae isolated from diabetic foot ulcer	4
Transcriptome analysis of Spodoptera RNA-seq data unveils new viruses within the family Rhabdoviridae	4
Characterization, phylogeny and recombination of Rhynchosia yellow mosaic virus infecting Rhynchosia minima, a wild relative of pigeonpea (Cajanus cajan) from India	4
Epstein–Barr virus miR-BART4-3p regulates cell proliferation, apoptosis, and migration by targeting AXL in gastric carcinoma	4
Molecular characterization and comparison of tomato zonate spot virus isolated in Japan and China	4
Comparative genomics of the Neodiprion sertifer nucleopolyhedrovirus from Turkey with the fewest ORFs among baculoviruses	4
Establishment and application of a duplex fluorescent quantitative PCR assay for H9N2 subtype avian influenza virus and infectious bronchitis virus	4
The virome of the white-winged vampire bat Diaemus youngi is rich in circular DNA viruses	4
Prevalence of Epstein-Barr virus and JC virus in tissue samples of gastric cancer, non-malignant, and controls by polymerase chain reaction in northwest Iran	4
Expression of F1L, a vaccinia virus H3L transmembrane protein analogue of orf virus, and its successful purification as a diagnostic antigen	4
Phylogenetic and diversity analyses revealed that leek yellow stripe virus population consists of three types: S, L, and N	4
Molecular characterization of human astrovirus infection in children under 5 years of age with acute gastroenteritis in Tehran, Iran, 2021–2022: co-infection with rotavirus	4
Enhancement of bactericidal effects of bacteriophage and gentamicin combination regimen against Staphylococcus aureus and Pseudomonas aeruginosa strains in a mice diabetic wound model	4
Pseudorabies virus as a zoonosis: scientific and public health implications	4
Global population dynamics and evolutionary selection in classical swine fever virus complete genomes: insights from Bayesian coalescent analysis	4
Isolation and characterization of a novel reassortant strain of Orthoreovirus mammalis from diarrheic pig	4
Shrimp classification for white spot syndrome detection through enhanced gated recurrent unit-based wild geese migration optimization algorithm	4
Characterization of DNA methylation and promoter activity of long terminal repeat elements of feline endogenous retrovirus RDRS C2a	4
Factors influencing the prevalence of acute bee paralysis virus in Apis mellifera and insights into its phylogenetic relationships	4
Spillover of Newcastle disease virus to Himalayan Griffon vulture: a possible food-based transmission	4
Characterization of the proteins encoded by a recently emerged cotton-infecting Polerovirus	4
Effect of HDAC9-induced deacetylation of glycolysis-related GAPDH lysine 219 on rotavirus replication in rotavirus-infected Caco-2 cells	4
The emergence of novel Iranian variants in sheeppox and goatpox viral envelope proteins with remarkably altered putative binding affinities with the host receptor	3
Molecular analysis of the env, LTR, and pX regions of bovine leukemia virus in dairy cattle of Türkiye	3
The potential emerging role of piRNA/PIWI complex in virus infection	3
Interaction of influenza A virus NS1 and cytoskeleton scaffolding protein α-actinin 4	3
Porcine epidemic diarrhea virus E protein induces unfolded protein response through activating both PERK and ATF6 rather than IRE1 signaling pathway	3
Jojan: a novel virus that lyses Stenotrophomonas maltophilia from dog	3
AMP-activated kinase regulates porcine reproductive and respiratory syndrome virus infection in vitro	3
Diversity of viroids infecting grapevines in the South African Vitis germplasm collection	3
Small RNA sequencing analysis reveals regulation of microRNA expression in Madin–Darby canine kidney epithelial cells infected with Canid alphaherpesvirus 1	3
Complete genome and molecular characterization of a putative novel citrivirus from Rudbeckia sp.	3
Construction and efficacy of a recombinant QX-like infectious bronchitis virus vaccine strain	3
Trichodysplasia spinulosa polyomavirus small T antigen synergistically modulates S6 protein translation and DNA damage response pathways to shape host cell environment	3
Exploring the role of YBX3 in PEDV infection through the utilization of YBX3 knockout and overexpression cell lines	3
Comparative transcriptomic and machine learning analysis identifies key genes and immune dysregulation in goats exposed to peste des petits ruminants virus	3
Study of Hsp90α and Hsp90β role in virus replication using cell lines with Hsp90 gene knockouts	3
Structure and function of the parvoviral NS1 protein: a review	3
Identification of monoclonal antibody targeting epitope on p72 trimeric spike of African swine fever virus	3
Molecular phylodynamics of fowl adenovirus serotype 11 and 8b from inclusion body hepatitis outbreaks	3
Genome sequence of a Sobemovirus from the feces of Northern Pintail (Anas acuta)	3
Unraveling potential gene biomarkers for dengue infection through RNA sequencing	2
Raising Awareness About Compromised Cell Lines, Better Science Practices, and Accountability	2
First detection of the occurrence and study of the genetic diversity of novel putative kirkoviruses in donkey in China	2
The full genome characterization of avian encephalomyelitis virus, Iran: a vertical transmission case	2
Dispersion and diversification of Lyssavirus rabies transmitted from haematophagous bats Desmodus rotundus: a phylogeographical study	2
Identification and epidemiological analysis of a putative novel hantavirus in Australian flying foxes	2
RHDV 3C protein antagonizes type I interferon signaling by cleaving interferon promoter stimulated 1 protein	2
Correction: Complete genome and molecular characterization of spiranthes mosaic virus 3 from Phlox paniculata	2
Molecular phylodynamics of infectious bursal disease viruses	2
Decoding codon usage in human papillomavirus type 59	2
Analysis of SARS-CoV-2 omicron mutations that emerged during long-term replication in a lung cancer xenograft mouse model	2
Detection and molecular epidemiology of canine parvovirus and identification of highly pathogenic CPV-2c isolates from Shandong, China	2
me53 encoded by Autographa californica multiple nucleopolyhedrovirus: from mechanism to function	2
Reintroduction of highly pathogenic avian influenza A H7N9 virus in southwestern China	2
Label-free proteomics analysis on the envelope of budded viruses of Bombyx mori nucleopolyhedrovirus harboring differential localized GP64	2
First report of the whole-genome sequence analysis of avian rotavirus A from Japanese chickens	2
A genetically novel avian Hepatitis E virus in China	2
Aquaporin-3 is down-regulated by LMP1 in nasopharyngeal carcinoma cells to regulate cell migration and affect EBV latent infection	2
Characterization and phylogenetic analysis of bovine gammaherpesvirus 4 isolated in China, 2022	2
Isolation of the novel phage SAP71 and its potential use against Staphylococcus aureus in an atopic dermatitis mouse model	2
Pooled screening for endogenous HHV-6 in subjects with coronary artery disease	2
A therapeutic approach for the hepatitis C virus: in silico design of an antisense oligonucleotide-based candidate capsid inhibitor	2
Molecular characterization of picobirnaviruses in small ruminants with diarrhea in Turkey	2
Identification and complete genome sequencing of a divergent olive virus T isolate and an olive leaf yellowing-associated virus isolate naturally infecting olive trees in Greece	2
Detection of hepatitis B virus (HBV) genotypes and co-infection with Torque Teno Virus (TTV) in HBV-positive patients at a tertiary care center in Puducherry, India	2
Development and application of a multiplex qPCR assay for the detection of duck circovirus, duck Tembusu virus, Muscovy duck reovirus, and new duck reovirus	2
Full-genome sequence of a novel potyvirus infecting Sauropus androgynus	2
Molecular functions of HAX1 during disease progress	2
Construction and characterisation of glycoprotein E and glycoprotein I deficient mutants of Australian strains of infectious laryngotracheitis virus using traditional and CRISPR/Cas9-assisted homologo	2
Development and application of a real-time fluorescent RAA assay for H9 subtype avian influenza viruses	2
Recent advances in treatment and detection of Rift Valley fever virus: a comprehensive overview	2
Complete genomic sequences and comparative analysis of two Orf virus isolates from Guizhou Province and Jilin Province, China	2
Detection and typing of dengue virus by one-step RT-PCR-based high-resolution melting assay	2
Guinea pig herpes like virus is a gamma herpesvirus	2
SOX9 negatively regulates the RLR antiviral signaling by targeting MAVS	2
Do HBsAg subdeterminants matter for vaccination against hepatitis B?	2
Alphanudiviral segments found in transcriptomes of the two-spotted spider mite, Tetranychus urticae (Acari: Tetranychidae)	2
The C-terminus of the tail fiber protein of PB1-like phages is responsible for the host recognition	1

Correction: Whole genome sequencing and annotation of a lysogenic phage vB_EcoP_DE5 isolated from donkey-derived Escherichia coli	1
Subregional origins of emerging SARS-CoV-2 variants during the second pandemic wave in Côte d’Ivoire	1
First reports of several viruses and a viroid including a novel vitivirus in Japan, found through virome analysis of bulk grape genetic resources	1
Donkey-like kirkovirus is associated with diarrhea in piglets	1
Nucleotide at position 66 of NS2A in Japanese encephalitis virus is associated with the virulence and proliferation of virus	1
Identification and characterization of mycoviruses in transcriptomes from the fungal family ceratocystidaceae	1
Attenuated African swine fever virus through serial passaging of viruses in cell culture: a brief review on the knowledge gathered during 60 years of research	1
Construction of SARS-CoV-2 spike-pseudotyped retroviral vector inducing syncytia formation	1
Effect of thymidine kinase-deficiency (∆ORF38) on neuropathogenicity of equine herpesvirus-1 in the mouse model and expression of neighboring genes	1
Genetic characterization of dengue virus 4 complete genomes from East Java, Indonesia	1
Complete genome sequence analysis, morphology and structural protein identification of two Bacillus subtilis phages, BSTP4 and BSTP6, which may form a new species in the genus Salasvirus	1
Full-length genome characterization of a novel mitovirus isolated from the root rot fungus Armillaria mellea	1
White yam (Dioscorea rotundata) plants exhibiting virus-like symptoms are co-infected with a new potyvirus and a new crinivirus in Ethiopia	1
Hyperactivation of p53 using CRISPRa kills human papillomavirus-driven cervical cancer cells	1
First complete genome sequence of lumpy skin disease virus directly from a clinical sample in South India	1
Identification and complete genome sequencing of a novel betapartitivirus naturally infecting the mycorrhizal desert truffle Terfezia claveryi	1
Isolation and characterization of a novel lytic bacteriophage vB_Efm_LG62 infecting Enterococcus faecium	1
Principles and practice of virus induced gene silencing for functional genomics in plants	1
Isolation and whole-genome sequence analysis of Balagodu virus in Japan	1
Detection of four isomers of the human cytomegalovirus genome using nanopore long-read sequencing	1
Comparison of HVT-ND recombinant and convection-based Newcastle disease vaccination programs in the protection against the genotype VII NDV challenges: an experimental study	1
Correction: Genomic analysis of Varicella zoster virus strains during an outbreak with atypical clinical presentations in Biswanath district of Assam, India	1
Novel orbivirus in Amblyomma tholloni ticks parasitizing African savanna elephants (Loxodonta africana) in Zambia	1
Genetic characterization of a novel HIV-1 circulating recombinant form (CRF162_cpx) involving CRF01_AE, CRF07_BC and subtype B in Guangdong, China	1
Establishment of reverse genetics for genotype VII Newcastle disease virus and altering the cell tropism by inserting TMPRSS2 into the viral genome	1
Complete genome organization and characterization of Hippeastrum latent virus	1
The complete genome sequence of an alphabaculovirus from the brown tussock moth, Olene mendosa Hübner, expands our knowledge of lymantriine baculovirus diversity and evolution	1
The global asymptotical stability of pseudorabies model with age-structure	1
Complete genome and molecular characterization of spiranthes mosaic virus 3 from Phlox paniculata	1
Expression and localization of Bombyx mori nucleopolyhedrovirus GP37	1
Advances in the study of LNPs for mRNA delivery and clinical applications	1
Molecular epidemiology and genetic evolution of avian influenza H5N1 subtype in Nigeria, 2006 to 2021	1
P4 protein of an Indian isolate of rice tungro bacilliform virus modulates gene silencing	1
Studies on insect virus-producing proteins as potential synergists for microbial insecticides: status and prospects	1
Correction: Molecular characterization of a novel variant of infectious bronchitis virus from field outbreaks in backyard chicken population of North East India	1
Molecular characterization and drug resistance pattern in pol gene of HIV-1 sub-subtypes circulating in Lahore, Pakistan	1
Isolation, characterization, and potential application of Acinetobacter baumannii phages against extensively drug-resistant strains	1
Screening and identification of specific cluster miRNAs in N2a cells infected by H7N9 virus	1
Prevalence and genetic diversity of HTLV-1 among blood donors in Jiroft, Iran: a comprehensive study	1
Virulence evaluation of Israeli Marek’s disease virus isolates from commercial poultry using their meq gene sequence	1
The isolation and serotyping of foot-and-mouth disease virus in Iran during 2019–2022	1
Norovirus GI.5 [P4]: first report of the rare norovirus recombinant variant in Northeastern Mexico and its global epidemiological context	1
Stearoyl-CoA desaturase 1 is targeted by EBV-encoded miR-BART20-5p and regulates cell autophagy, proliferation, and migration in EBV-associated gastric cancer	1
Study on the regulatory mechanism of latent membrane protein 2A on GCNT3 expression in nasopharyngeal carcinoma	1
Lumpy skin disease: a systematic review of mode of transmission, risk of emergence, and risk entry pathways	1
Molecular characterization and evolutionary analysis of human adenovirus type 55, related to febrile respiratory illness in the South Korean military	1
CHIKV strains Brazil (wt) and Ross (lab-adapted) differ with regard to cell host range and antiviral sensitivity and show CPE in human glioblastoma cell lines U138 and U251	1
Detection and characterization of H5N1 HPAIV in environmental samples from a dairy farm	1
Characterization of a reassortant H11N9 subtype avian influenza virus isolated from spot-billed duck in China	1
Molecular detection of monkeypox and related viruses: challenges and opportunities	1
Phylogenetic analyses of the spread of Clade I MPOX in African and non-African nations	1
Molecular characteristics and pathogenicity of an equid alphaherpesvirus 1 strain isolated in China	1
Screening of candidate genes associated with high titer production of oncolytic measles virus based on systems biology approach	1
Potentials as biomarker and therapeutic target of upregulated long non-coding RNA HLA-F antisense RNA 1 in hepatitis B virus-associated hepatocellular carcinoma	1
Tackling hepatitis B Virus with CRISPR/Cas9: advances, challenges, and delivery strategies	1
Approaches to identify canine distemper virus with neurological symptoms on the basis of molecular characterization of hemagglutinin and fusion genes	1
Activating transcription factor 3 mediates apoptotic functions through a p53-independent pathway in human papillomavirus 18 infected HeLa cells	1
A new isolate of mungbean yellow mosaic India virus in Vigna mungo L. reported from a Dayalbagh field, Agra	1
Regulation of type I interferon factor secretion via the TLR3 signaling pathway after PRV infection of mouse trigeminal ganglion cells	1
Association of TREX1 polymorphism with disease progression in human immunodeficiency virus type-1 (HIV-1) infected patients	1
Expanding the diversity of Celavirus, the most divergent genus in the family Potyviridae	1
Quantitative analysis of Epstein–Barr virus DNA in plasma and stomach biopsies of patients with gastric cancer	1
The conserved cysteines at position 18, 36, and 49 of Autographa californica multiple nucleopolyhedrovirus VP39 are essential for virus replication	1
Rapid and visual detection of Lentinula edodes spherical virus using CRISPR/Cas12a-based RT-RPA	1
Genetic characterization of dengue virus from patients presenting multi-serotypic infections in the Northern West Bengal, India	1
MiR-BART1-3p and BART18-5p inhibit cell migration, proliferation and activate autophagy in Epstein-Barr virus-associated gastric cancer by targeting erythropoietin-producing human hepatocellular 2	1
Molecular epidemiology and phylogenetic analysis of human respiratory syncytial virus type B in Riyadh, Saudi Arabia	1
Comprehensive analysis of clinical indications and viral strain variants among patients infected with SARS-CoV-2 in Inner Mongolia, China	1
Transcriptome sequencing of LMP2A-transfected gastric cancer cells identifies potential biomarkers in EBV-associated gastric cancer	1
Investigation of canine chaphamaparvovirus, canine bufavirus, and canine adenovirus in dogs with diarrhea: First report of novel canine bufavirus in Turkey	1