OOIR: Observatory of International Research

Papers

(The TQCC of Virus Genes is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-06-01 to 2025-06-01.)

Article	Citations
Complete genome sequence of malva-associated soymovirus 1: a novel virus infecting common mallow	62
Correction: First reports of several viruses and a viroid including a novel vitivirus in Japan, found through virome analysis of bulk grape genetic resources	59
Correction to: Molecular identification of Betacoronavirus in bats from Sardinia (Italy): first detection and phylogeny	29
Immune response induced by recombinant pres2/S-protein and a pres2-S-protein fused with a core 18-27 antigen fragment of hepatitis B virus compared to conventional HBV vaccine	26
Characterization of the functional domains of nuclear shuttle protein (NSP) of Indian cassava mosaic virus using green fluorescent protein as reporter	25
The genetic and biological characterization of the first avian paramyxovirus serotype 14 isolated from chicken in China	21
The H5N1-NS1 protein affects the host cell cycle and apoptosis through interaction with the host lncRNA PIK3CD-AS2	20
Antiviral siRNA delivered using attenuated, anthrax toxin protects cells from the cytopathic effects of Zika virus	17
MiR-339-5p inhibits replication of porcine reproductive and respiratory syndrome virus by targeting viral gene regions	16
Bioinformatic identification of monkeypox virus phylogenetic gene trees that are representative of its whole-genome phylogenetic tree	15
New lytic and new temperate Staphylococcus hyicus phages	14
Domestic cat hepadnavirus genotype B is present in Southern Brazil	14
Aborted infection of human sodium taurocholate cotransporting polypeptide (hNTCP) expressing woodchuck hepatocytes with hepatitis B virus (HBV)	14
Genome sequence analysis of H7N3 subtype avian influenza virus originated from wild birds and its potential infectivity in mice	14
Molecular characterization of a novel variant of infectious bronchitis virus from field outbreaks in backyard chicken population of North East India	13
Comparative genomics and evolutionary analysis of dengue virus strains circulating in Pakistan	13
Characterization of two novel fusariviruses co-infecting a single isolate of phytopathogenic fungus Botrytis cinerea	12
First detection and diversity of astroviruses in wild migratory birds of Sakhalin Island, North Pacific	12
Nuclear respiratory factor 1 promotes the progression of EBV-associated gastric cancer and maintains EBV latent infection	12
Complete genome sequence analysis and biological characteristics of Newcastle disease viruses from different hosts in China	12
Lineage and sublineage analysis of human papillomavirus types 51 and 59 in Iranian women	11
Sequence analysis of the Spike, RNA-dependent RNA polymerase, and protease genes reveals a distinct evolutionary pattern of SARS-CoV-2 variants circulating in Yogyakarta and Central Java provinces, In	11
Characterization of a breakthrough vaccine escape strain associated with overt hepatitis B virus infection	11
A novel one-step amplification refractory mutation system PCR (ARMS-PCR) for differentiation of canine parvovirus-2 variants	11
Co-circulation of two Mumps virus genotypes in Assam, India	11

Genotypic characterization of Japanese encephalitis virus circulating in swine population of India: Genotype-III still in dominance	10
Gushan virus: a newly discovered virus found in mosquitoes of Shandong, China	10
Exploration of plant transcriptomes reveals five putative novel poleroviruses and an enamovirus	10
Aedes aegypti Totivirus identified in mosquitoes in the Brazilian Amazon region	10
The Citrus yellow mosaic badnavirus ORFI functions as a RNA-silencing suppressor	10
Mutations in the S gene of hepatitis B virus in three generations of patients with chronic hepatitis B	10
Transient expression analysis of promoters of okra enation leaf curl virus in Nicotiana benthamiana, cotton and okra plants	9
Characterization and genomic analysis of a novel bacteriophage BUCT_49532 lysing Klebsiella pneumoniae	9
Whole genome sequencing and evolution analyses of Human metapneumovirus	9
Phylogenetic and evolutionary analysis of foot-and-mouth disease virus A/ASIA/Sea-97 lineage	8
The genome evolution of Marek’s disease viruses in chickens and turkeys in China	8
Isolation, characterization, and genomic analysis of vB_PaeS_TUMS_P81, a lytic bacteriophage against Pseudomonas aeruginosa	8
RNA sequencing of avian paramyxovirus (Paramyxoviridae, Avulavirinae) isolates from wild mallards in Belgium, 2021: complete genomes and coinfections	8
Pan-serotype reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay targeting 2B-NSP coding region for colorimetric detection of foot-and-mouth disease virus in clinical samples	8
Distinct interferon response in bat and other mammalian cell lines infected with Pteropine orthoreovirus	8
Correction to: Characterization of the first Rubus yellow net virus genome from blackberry	8
Isolation and genomic characterization of a cypovirus from Clanis bilineata	7
VP7, VP4, and NSP4 genes of species a rotaviruses isolated from sewage in Nigeria, 2014/2015: partial sequence characterization and biophysical analysis of NSP4 (enterotoxin)	7
H3K4me3 histone modification in baculovirus-infected silkworm cells	7
Phylogenetic analysis of porcine reproductive and respiratory syndrome virus in Vietnam, 2021	7
Molecular and phylogenetic analysis of influenza A and B viruses circulating in Sri Lanka following the COVID-19 pandemic	7
Characterization of Phietavirus Henu 2 in the virome of individuals with acute gastroenteritis	7
Molecular characterization and genetic analysis of highly pathogenic H5N1 clade 2.3.4.4b in seagulls from Dukan Lake, Iraq	7
Increased virulence of a novel reassortant H1N3 avian influenza virus in mice as a result of adaptive amino acid substitutions	7
Complete genome sequence of Xanthomonas phage M29, a new member of Foxunavirus isolated in the Czech Republic	7
Whole genome sequencing and genomic characterization of a DS-1-like G2P[4] group A rotavirus in Japan	7
Detectable episodic positive selection in the virion strand a-strain Maize streak virus genes may have a role in its host adaptation	6
Duck sewage source coliphage P762 can lyse STEC and APEC	6
Hantavirus Brno loanvirus is highly specific to the common noctule bat (Nyctalus noctula) and widespread in Central Europe	6
SCD1 inhibits HBV replication by regulating autophagy under high lipid conditions	6
Whole-genome characterization of avian picornaviruses from diarrheic broiler chickens co-infected with multiple picornaviruses in Iran	6
Characterization of two novel reassortant bluetongue virus serotype 1 strains isolated from farmed white-tailed deer (Odocoileus virginianus) in Florida, USA	6
Long non-coding RNA C1RL-AS1 aggravates influenza A virus pneumonia through miR-16-5p/LAMP3	6
Leucoma salicis nucleopolyhedrovirus (LesaNPV) genome sequence shed new light on the origin of the Alphabaculovirus orpseudotsugatae species	6
The complete genomic sequence of Magnaporthe oryzae polymycovirus 1	6
Reverse transcription recombinase-aided amplification assay for avian influenza virus	6
The complete genome of equid herpesvirus-1 (EHV-1) field isolates from Argentina reveals an interspecific recombinant strain	6
The arrival of highly pathogenic avian influenza viruses H5N8 in Iran through two windows, 2016	5
Metagenomic sequencing determines complete infectious bronchitis virus (avian Gammacoronavirus) vaccine strain genomes and associated viromes in chicken clinical samples	5
Muramidase, nuclease, or hypothetical protein genes intervene between paired genes encoding DNA packaging terminase and portal proteins in Wolbachia phages and prophages	5
Correction: The complete genomic sequence of Magnaporthe oryzae polymycovirus 1	5
Genetic characterisation of the influenza viruses circulating in Bulgaria during the 2019–2020 winter season	5
Characterization and genome analysis of Klebsiella phages with lytic activity against Klebsiella pneumoniae	5
Foreign gene expression attenuates a virulent Newcastle disease virus in chickens	5
Genome characterization of fig umbra-like virus	5
Characterization of the first Rubus yellow net virus genome from blackberry	5
Expression of F1L, a vaccinia virus H3L transmembrane protein analogue of orf virus, and its successful purification as a diagnostic antigen	5
Antibacterial effects of single phage and phage cocktail against multidrug-resistant Klebsiella pneumoniae isolated from diabetic foot ulcer	5
A virus from Aspergillus cibarius with features of alpha- and betachrysoviruses	5
Genetic analysis of human parainfluenza type 2 virus in Riyadh, Saudi Arabia	5

Shrimp classification for white spot syndrome detection through enhanced gated recurrent unit-based wild geese migration optimization algorithm	5
Correction to: Complete genome sequences of infectious spleen and kidney necrosis virus isolated from farmed albino rainbow sharks Epalzeorhynchos frenatum in the United States	4
Phylogenetic analysis and molecular genetic characteristics of West Nile virus lineage 2 isolates circulating in the Russian Federation	4
Establishment and application of a duplex fluorescent quantitative PCR assay for H9N2 subtype avian influenza virus and infectious bronchitis virus	4
Enhancement of bactericidal effects of bacteriophage and gentamicin combination regimen against Staphylococcus aureus and Pseudomonas aeruginosa strains in a mice diabetic wound model	4
G1-like PB2 gene improves virus replication and competitive advantage of H9N2 virus	4
Eukaryotic initiating factor eIF4E is targeted by EBV-encoded miR-BART11-3p and regulates cell cycle and apoptosis in EBV-associated gastric carcinoma	4
The virome of the white-winged vampire bat Diaemus youngi is rich in circular DNA viruses	4
Comparative genomics of the Neodiprion sertifer nucleopolyhedrovirus from Turkey with the fewest ORFs among baculoviruses	4
One-step SYBR green-based real-time RT-PCR assay for detection of foot-and-mouth disease virus circulating in India	4
Molecular characterization of human astrovirus infection in children under 5 years of age with acute gastroenteritis in Tehran, Iran, 2021–2022: co-infection with rotavirus	4
Molecular characterization and comparison of tomato zonate spot virus isolated in Japan and China	4
Phylogenetic and diversity analyses revealed that leek yellow stripe virus population consists of three types: S, L, and N	4
Global population dynamics and evolutionary selection in classical swine fever virus complete genomes: insights from Bayesian coalescent analysis	4
Prevalence of Epstein-Barr virus and JC virus in tissue samples of gastric cancer, non-malignant, and controls by polymerase chain reaction in northwest Iran	4
Genetic characteristics of a novel HIV-1 recombinant lineage (CRF103_01B) and its prevalence in northern China	4
Effect of HDAC9-induced deacetylation of glycolysis-related GAPDH lysine 219 on rotavirus replication in rotavirus-infected Caco-2 cells	4
Characterization, phylogeny and recombination of Rhynchosia yellow mosaic virus infecting Rhynchosia minima, a wild relative of pigeonpea (Cajanus cajan) from India	4
Characterization of DNA methylation and promoter activity of long terminal repeat elements of feline endogenous retrovirus RDRS C2a	4