OOIR: Observatory of International Research

Papers

(The TQCC of Research in Microbiology is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-05-01 to 2024-05-01.)

Article	Citations
Quorum sensing: its role in microbial social networking	38
Fungal infections diagnosis – Past, present and future	32
Volatile organic compounds produced by Aureobasidium pullulans induce electrolyte loss and oxidative stress in Botrytis cinerea and Alternaria alternata	25
Proposal for reunification of the genus Raoultella with the genus Klebsiella and reclassification of Raoultella electrica as Klebsiella electrica comb. nov.	23
Combined antimicrobial use of essential oils and bacteriocin bacLP17 as seafood biopreservative to control Listeria monocytogenes both in planktonic and in sessile forms	22
Bacterial exopolysaccharides as emerging bioactive macromolecules: from fundamentals to applications	20
Quinones: more than electron shuttles	19
Bacteriophage therapy: recent developments and applications of a renaissant weapon	18
Amino acids are key substrates to Escherichia coli BW25113 for achieving high specific growth rate	18
Pentadecanoic acid against Candida albicans-Klebsiella pneumoniae biofilm: towards the development of an anti-biofilm coating to prevent polymicrobial infections	17
Auxin biosynthesis in the phytopathogenic fungus Leptosphaeria maculans is associated with enhanced transcription of indole-3-pyruvate decarboxylase LmIPDC2 and tryptophan aminotransferase LmTAM1	17
Escherichia coli enhances the virulence factors of Candida albicans, the cause of vulvovaginal candidiasis, in a dual bacterial/fungal biofilm	17
Occurrence of filamentous fungi in drinking water: their role on fungal-bacterial biofilm formation	15
Vancomycin-resistant Enterococcus faecium and the emergence of new sequence types associated with hospital infection	15
Haloarchaea have a high genomic diversity for the biosynthesis of carotenoids of biotechnological interest	15
Morpholinium-based ionic liquids show antimicrobial activity against clinical isolates of Pseudomonas aeruginosa	13
First insights to the microbial communities in the plant process water of the multi-metal Kevitsa mine	13
SwrA as global modulator of the two-component system DegSU in Bacillus subtilis	12
Bacteriophages that infect Gram-negative bacteria as source of signal-arrest-release motif lysins	12
Involvement of amyloid proteins in the formation of biofilms in the pathogenic yeast Candida albicans	12
Tightly controlled response to oxidative stress; an important factor in the tolerance of Bacteroides fragilis	11
Molecular and physiological analysis of indole-3-acetic acid degradation in Bradyrhizobium japonicum E109	11
The histone acetyltransferase FocGCN5 regulates growth, conidiation, and pathogenicity of the banana wilt disease causal agent Fusarium oxysporum f.sp. cubense tropical race 4	10
Isolation, characterization, and efficacy of bacteriophages isolated against Citrobacter spp. an in vivo approach in a zebrafish model (Danio rerio)	10
An effective culturomics approach to study the gut microbiota of mammals	9

Antisense peptide nucleic acid inhibits the growth of KPC-producing Klebsiella pneumoniae strain	9
Efficient method for targeted gene disruption by homologous recombination in Mycobacterium avium subspecie paratuberculosis	8
Phylogenomics and comparative genomic analyses support the creation of the novel family Ignatzschineriaceae fam. nov. comprising the genera Ignatzschineria and Wohlfahrtiimonas within the order Cardio	8
N6-methyladenine and epigenetic immunity of Deinococcus radiodurans	8
Involvement of serine / threonine protein kinases in DNA damage response and cell division in bacteria	8
Effect of bile on growth and biofilm formation of non-typhoidal salmonella serovars isolated from seafood and poultry	8
Carvacrol modulates the expression and activity of antioxidant enzymes in Candida auris	8
The persistence of time: the lifespan of Bacillus anthracis spores in environmental reservoirs	8
Klebsiella MALDI TypeR: a web-based tool for Klebsiella identification based on MALDI-TOF mass spectrometry	8
High reduction of staphylococcal biofilm by aqueous extract from marine sponge-isolated Enterobacter sp.	8
A novel ItrA4 d-galactosyl 1-phosphate transferase is predicted to initiate synthesis of an amino sugar-lacking K92 capsular polysaccharide of Acinetobacter baumannii B8300	8
Secretion systems play a critical role in resistance to predation by Bdellovibrio bacteriovorus	7
Signalling mechanisms involved in stress response to antifungal drugs	7
Novel strains of Klebsiella africana and Klebsiella pneumoniae in Australian fruit bats (Pteropus poliocephalus)	7
New insight into the relationship between Salmonella Typhimurium and the German cockroach suggests active mechanisms of vector-borne transmission	7
Core genome multilocus sequence typing scheme for Bacillus cereus group bacteria	7
Improved eradication efficacy of a combination of newly identified antimicrobial agents in C. albicans and S. aureus mixed-species biofilm	7
Effect of inoculum history, growth substrates and yeast extract addition on inhibition of Sulfobacillus thermosulfidooxidans by NaCl	7
Cadaverine biosynthesis contributes to decreased Escherichia coli susceptibility to antibiotics	7
Proteomic comparison of biofilm vs. planktonic Staphylococcus epidermidis cells suggests key metabolic differences between these conditions	7
Cross-correlating analyses of mineral-associated microorganisms in an unsaturated packed bed flow-through column test; cell number, activity and EPS	7
Antimicrobial peptides against drug resistant Mycobacterium abscessus	7
Doderlin: isolation and characterization of a broad-spectrum antimicrobial peptide from Lactobacillus acidophilus	7
Biofilm formation by ST17 and ST19 strains of Streptococcus agalactiae	7
Study of the relationship between extracellular superoxide and glutathione production in batch cultures of Escherichia coli	7
Staphylococcus aureus surface protein G (sasG) allelic variants: correlation between biofilm formation and their prevalence in methicillin-resistant S. aureus (MRSA) clones	6
Biochemical and molecular mechanisms of antibiotic resistance in Salmonella spp.	6
The protein–protein interaction network of the Escherichia coli EIIANtr regulatory protein reveals a role in cell motility and metabolic control	6
Formation and use of biogenic jarosite carrier for high-rate iron oxidising biofilms	6
Biofilm formation and social interaction of Leptospira in natural and artificial environments	6
Redox stress response and UV tolerance in the acidophilic iron-oxidizing bacteria Leptospirillum ferriphilum and Acidithiobacillus ferrooxidans	6
Myxobacteria: biology and bioactive secondary metabolites	6
Systematic transcriptome analysis allows the identification of new type I and type II Toxin/Antitoxin systems located in the superintegron of Vibrio cholerae	6
Effect of actinorhizal root exudates on the proteomes of Frankia soli NRRL B-16219, a strain colonizing the root tissues of its actinorhizal host via intercellular pathway	6
AmpR is a dual regulator in Stenotrophomonas maltophilia with a positive role in β-lactam resistance and a negative role in virulence, biofilm and DSF production	6
Sulfoacidibacillus ferrooxidans, gen. nov., sp. nov., Sulfoacidibacillus thermotolerans, gen. nov., sp. nov., and Ferroacidibacillus organovorans, gen. nov., sp. nov.: Extremely acidophilic chemolitho	6
Genomic analysis of Chryseobacterium indologenes and conformational dynamics of the selected DD-peptidase	6
Bivalent copper ions presence triggers removal and homeostatic mechanisms in the metal-resistant microorganism Apiotrichum loubieri M12	5
Analysis of AcrB in Klebsiella pneumoniae reveals natural variants promoting enhanced multidrug resistance	5
Assessment of the growth inhibition and anti-biofilm activity of aptamer (PmA2G02) against Proteus mirabilis 1429T	5
Diverse Enterococcus faecalis strains show heterogeneity in biofilm properties	5
Silencing acpP gene via antisense oligonucleotide-niosome complex in clinical Pseudomonas aeruginosa isolates	5
Study of the early response of Escherichia coli lpcA and ompF mutants to ciprofloxacin	5
Isoprene production by Rhodobacter sphaeroides and its antimicrobial activity	5
Rates of iron(III) reduction coupled to elemental sulfur or tetrathionate oxidation by acidophilic microorganisms and detection of sulfur intermediates	5
Microbial community composition in iron deposits and manganese crusts formed in riverine environments around the Aso area in Japan	5
Involvement of RNA chaperone hfq in the regulation of antibiotic resistance and virulence in Shigella sonnei	5
Comparative proteomics reveals essential mechanisms for osmotolerance in Gluconacetobacter diazotrophicus	5
Phylogenomics and molecular marker-based analyses of the order Nevskiales: proposal for the creation of Steroidobacterales ord. nov. and Peristeroidobacter gen. nov	5
Beyond membrane components: uncovering the intriguing world of fungal sphingolipid synthesis and regulation	5