OOIR: Observatory of International Research

Papers

(The TQCC of Mammalian Genome is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-06-01 to 2026-06-01.)

Article	Citations
EEF1A1 transcription cofactor gene polymorphism is associated with muscle gene expression and residual feed intake in Nelore cattle	62
Primary biliary cirrhosis and rheumatoid arthritis: a comprehensive study combining genetics and transcriptomics	26
Comprehensive analysis reveals the prognostic and immunological role of PSMD13 in hepatocellular carcinoma	24
Unraveling the maternal heritage: identifying the complex origins of indigenous Indian horse and pony breeds through mitochondrial genome analysis	22
Glycosylated protein-related microenvironmental features in breast cancer are associated with patient prognosis	20
Polymorphisms in IRF3 exon 1 influence the immune response to Brucella infection in small ruminants	18
Cancer-associated TRF1 mutations alter PARP1 interaction dynamics: an in silico study	18
Standardisation and future of preclinical echocardiography	16
CPNE1 modulates Parkinson’s disease risk through peripheral immune cell function: a cross-tissue and single-cell causal inference study	15
Genetic and immune landscape of keratoconus: insights from Mendelian randomization analysis	15
An interaction of inorganic arsenic exposure with body weight and composition on type 2 diabetes indicators in Diversity Outbred mice	14
Contrasting the genetic architecture of cardiac glutathione against other organs: unveiling a unique tissue-specific locus	14
Climate resilience in goats: a comprehensive review of the genetic basis for adaptation to varied climatic conditions	14
Evaluation of genotype imputation using Glimpse tools on low coverage ancient DNA	14
Comparative single-cell analysis of the adult heart and coronary vasculature	13
Genome-wide in-silico identification and characterization of LTR retrotransposons in domestic goat (Capra hircus)	13
Integrative immunogenomic and experimental characterization reveals CXCL9, CXCL13, CCL5 and CD74 as key oncogenic drivers in breast cancer	12
Introduction to Mammalian Genome special issue: cardiovascular disease in the Mammalian Genome.	12
AgAnimalGenomes: browsers for viewing and manually annotating farm animal genomes	11
Review on camel genetic diversity: ecological and economic perspectives	11
EEF1A2 identified as a hub gene associated with the severity of metabolic dysfunction-associated steatotic liver disease	10
Copy number evolution of conserved noncoding RNA gene families across mammals	10
Impaired immune metabolism in COPD driven by dysfunction of CXCL16 + alveolar macrophages: multivariate causal evidence	10
Evaluation of genomic breeding values and accuracy for carcass traits in Korean Hanwoo cows using whole-genome SNP chip panels	10
Neurodevelopment as a shared genetic etiology linking sleep-related phenotypes and psychiatric disorders: a genome-wide pleiotropic analysis	9

IMPC impact on preclinical mouse models	9
Generation of a humanized mAce2 and a conditional hACE2 mouse models permissive to SARS-COV-2 infection	9
E2F2 inhibits hippocampal neurogenesis in poststroke depression rats via the miR-1290/CBR1 axis	8
Commentary: towards a national research infrastructure strategy for preclinical biological models in Australia	8
Exploring the molecular function of LYPD3 from pan-cancer to lung cancer: based on bioinformatics and cellular experiments	8
Genome-wide SNP evidence for the genetic uniqueness of indigenous cattle population	8
The mouse resource at National Resource Center for Mutant Mice of China	8
Alpha-synuclein pathology and Parkinson’s disease-related olfactory dysfunctions: an update on preclinical models and therapeutic approaches	8
TCR CDR3 chemical complementarity to HPV epitopes is associated with a better outcome for cervical cancer	8
Cell-type-specific causal effects of CEBPD in CD8 + S100B + Tcells and ZFP36 in monocytes modulate the protective and risk phenotypes in psoriasis	8
Elucidation of genetic determinants of dyslipidaemia using a global screening array for the early detection of coronary artery disease	8
Are we fully exploiting genetic discoveries to understand and treat Alzheimer’s disease?	8
Neonatal lethality of mouse A/J-7SM consomic strain is caused by an insertion mutation in the Dchs1 gene	8
Knockdown of SOX4 attenuates sepsis myocardial injury by inhibiting the EZH2/H3K27me3/SOCS3 axis	8
Comprehensive overview of disease models for Wolfram syndrome: toward effective treatments	8
Multi-omics dissection of RAD21-PON1 axis reveals metabolic-immune crosstalk and prognostic significance in hepatocellular carcinoma	8
Transforming beef quality through healthy breeding: a strategy to reduce carcinogenic compounds and enhance human health: a review	7
Long-read whole-genome sequencing of SHR rat substrains with distinct substance use phenotypes	7
A consensus score to combine inferences from multiple centres	7
Harmonizing mouse anatomy terminology: a common language?	7
Exploration of shared diagnostic genes and mechanisms between crohn’s disease and ischemic stroke by integrated comprehensive bioinformatics analysis and machine learning	7
A fascination with tailless mice: a scientific historical review of studies of the T/t complex	7
Genetic insights into crossbred dairy cattle of Pakistan: exploring allele frequency, linkage disequilibrium, and effective population size at a genome-wide scale	7
Challenges of modelling TDP-43 pathology in mice	6
Insights from homozygous signatures of cervus nippon revealed genetic architecture for components of fitness	6
Predicting the potential deterioration of Barrett’s esophagus based on gut microbiota: a Mendelian randomization analysis	6
Dynamics and regulatory role of 5-methylcytosine modification in mRNA colocalized with RNA G-quadruplex structure in mouse development	6
Maternal genetic diversity and phylogenetic analysis of Indian riverine and swamp buffaloes: insights from complete mitochondrial genomes	6
AHDSN: an attention-enabled hybrid deep sequential network for cancer survivability prediction from multi-omics data	6
Tachol1 QTL on mouse chromosome 1 is responsible for hypercholesterolemia and diet-induced obesity	6
Purebred dogs show higher levels of genomic damage compared to mixed breed dogs	6
Comparative genomic studies on the TGF-β superfamily in blue whale	6
Alantolactone curbs the malignant progression of bladder cancer partly via the HSP90AB1/LRP5/β-catenin axis	5
Arginine attenuates chronic mountain sickness in rats via microRNA-144-5p	5
E3 ubiquitin ligase COP1-mediated CEBPB ubiquitination regulates the inflammatory response of macrophages in sepsis-induced myocardial injury	5
Enhanced computational strategies for categorizing HER2 kinase domain variants of uncertain significance through structural and functional analysis	5
The mutant mouse resource and research center (MMRRC) consortium: the US-based public mouse repository system	5
Identification of EXO1 as a potential biomarker associated with prognosis and tumor immune microenvironment for specific human cancers	5
Comprehensive analysis of chromosomal breakpoints and candidate genes associated with male infertility: insights from cytogenetic studies and expression analyses	5
Three-dimensional microCT imaging of mouse heart development from early post-implantation to late fetal stages	5
Elucidation of population stratifying markers and selective sweeps in crossbred Landlly pig population using genome-wide SNP data	5
Genome-wide study for signatures of selection identifies genomic regions and candidate genes associated with milk traits in sheep	5
Swine global genomic resources: insights into wild and domesticated populations	5
Genome-wide screening for genetic variants in polyadenylation signal (PAS) sites in mouse selection lines for fatness and leanness	4
Identification of prostate cancer associated genes for diagnosis and prognosis: a modernized in silico approach	4
A comprehensive review of livestock development: insights into domestication, phylogenetics, diversity, and genomic advances	4
Mouse phenome database: curated data repository with interactive multi-population and multi-trait analyses	4
Identification of important gene signatures in schizophrenia through feature fusion and genetic algorithm	4
Mammalian genome research resources available from the National BioResource Project in Japan	4
Identification and validation of PANX1 as an inflammasome-related biomarker in gestational diabetes mellitus: insights from machine learning and experimental approaches	4

Genome engineering with Cas9 and AAV repair templates, successes and pitfalls	4
Echo2Pheno: a deep-learning application to uncover echocardiographic phenotypes in conscious mice	4
Genetic factors underlying Mandibular prognathism: insights from recent human and animal studies	4
Comprehensive analysis of breast cancer oxidative stress related gene signature: a combination of bulk and single-cell RNA sequencing analysis	4
Recent advances in the genomic resources for sheep	4
MicroRNA dysregulation in male infertility: Insights into mechanisms, biomarkers, and therapeutic strategies- review	4
Genome assembly of the Neotropical marsh rat Holochilus nanus (Cricetidae: Sigmodontinae) brings insights on B and sex chromosome evolution	4
Combined single-cell RNA sequencing and mendelian randomization to identify biomarkers associated with circadian rhythm in sarcopenia	4
Complementarity and integration of animal and in vitro non-animal pre-clinical model systems– an Australian perspective	4
Mapping copy number variable regions correlated with reproduction and production traits in Karan Fries cattle mammalian genomics	4
Impact of IL-6 rs1800795 and rs1800796 polymorphisms on clinical outcomes of COVID-19: a study on severity of disease in Turkish population	4
The interplay of hydrogen sulfide and microRNAs in cardiovascular diseases: insights and future perspectives	4
Inflammatory cytokines are associated with stroke and risk factors of cerebrovascular diseases: a Mendelian randomization study	4