Molecular Phylogenetics and Evolution

Papers
(The H4-Index of Molecular Phylogenetics and Evolution is 27. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-06-01 to 2025-06-01.)
ArticleCitations
Editorial Board68
The distribution and characteristic of two transposable elements in the genome of Cydia pomonella granulovirus and codling moth67
Inclusivity is key to progressing coral biodiversity research: Reply to comment by Bonito et al. (2021)65
Erratum to “Disentangling historical relationships within Poeciliidae (Teleostei: Cyprinodontiformes) using ultraconserved elements” [Mol. Phylogenet. Evol. 190 (2024) 107965]61
Peering through the hedge: Multiple datasets yield insights into the phylogenetic relationships and incongruences in the tribe Lilieae (Liliaceae)57
Disconnecting trapdoors: Phylogenomic analyses reveal evolutionary contrasts in trapdoor spiders with intercontinental distribution (Idiopidae, Idiopinae)57
Resolving the phylogenetic relationship among recently diverged members of the rockfish subgenus Sebastosomus56
Machine learning can be as good as maximum likelihood when reconstructing phylogenetic trees and determining the best evolutionary model on four taxon alignments52
When colors mislead: Genomics and bioacoustics prompt re-classification of Asian flycatcher radiation (Aves: Niltavinae)47
Revisiting evolutionary relationships of Antrodiaetus (Araneae, Mygalomorphae, Antrodiaetidae) using phylogenomics; implications for species diversity and biogeography of a persistent Holarctic lineag43
Diversification and introgression in four chromosomal taxa of the Pearson’s horseshoe bat (Rhinolophus pearsoni) group43
Surveying keratose sponges (Porifera, demospongiae, Dictyoceratida) reveals hidden diversity of host specialist barnacles (Crustacea, Cirripedia, Balanidae)43
Large-scale phylogenomic analysis provides new insights into the phylogeny of the class Oligohymenophorea (Protista, Ciliophora) with establishment of a new subclass Urocentria nov. subcl42
The systematics and evolution of the Sri Lankan rainforest land snail Corilla: New insights from RADseq-based phylogenetics42
Population genomics indicate three different modes of divergence and speciation with gene flow in the green-winged teal duck complex40
Phylogenomics and biogeography of arid-adapted Chlamydogobius goby fishes37
Resolving the deep phylogeny: Implications for early adaptive radiation, cryptic, and present-day ecological diversity of Papuan microhylid frogs36
Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes35
Recent evolution of extreme sexual dimorphism in the huia (Heteralocha acutirostris; Callaeidae)34
Phylogeny and historical biogeography of the pantropical genus Parkia (Leguminosae, Caesalpinioideae, mimosoid clade)31
Evolution of Potato virus X30
Incomplete lineage sorting and hybridization underlie tree discordance in Petunia and related genera (Petunieae, Solanaceae)30
Providing a phylogenetic framework for trait-based analyses in brown algae: Phylogenomic tree inferred from 32 nuclear protein-coding sequences29
ModelRevelator: Fast phylogenetic model estimation via deep learning29
The evolution of primate malaria parasites: A study on the origin and diversification of Plasmodium in lemurs29
Genomic phylogeography illuminates deep cyto-nuclear discordances in midwife toads (Alytes)28
Maturyoshka: A maturase inside a maturase, and other peculiarities of the novel chloroplast genomes of marine euglenophytes28
Temporal and spatial diversification along the Amazonia-Cerrado transition in Neotropical treefrogs of the Boana albopunctata species group27
Geological events and climate change drive diversification and speciation of mute cicadas in eastern continental Asia27
0.09145188331604