Molecular Phylogenetics and Evolution

Papers
(The median citation count of Molecular Phylogenetics and Evolution is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-08-01 to 2025-08-01.)
ArticleCitations
The distribution and characteristic of two transposable elements in the genome of Cydia pomonella granulovirus and codling moth70
Editorial Board70
Inclusivity is key to progressing coral biodiversity research: Reply to comment by Bonito et al. (2021)68
Erratum to “Disentangling historical relationships within Poeciliidae (Teleostei: Cyprinodontiformes) using ultraconserved elements” [Mol. Phylogenet. Evol. 190 (2024) 107965]61
Resolving the phylogenetic relationship among recently diverged members of the rockfish subgenus Sebastosomus59
Revisiting evolutionary relationships of Antrodiaetus (Araneae, Mygalomorphae, Antrodiaetidae) using phylogenomics; implications for species diversity and biogeography of a persistent Holarctic lineag56
Surveying keratose sponges (Porifera, demospongiae, Dictyoceratida) reveals hidden diversity of host specialist barnacles (Crustacea, Cirripedia, Balanidae)46
Evolution of Potato virus X45
Diversification and introgression in four chromosomal taxa of the Pearson’s horseshoe bat (Rhinolophus pearsoni) group45
Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes43
Providing a phylogenetic framework for trait-based analyses in brown algae: Phylogenomic tree inferred from 32 nuclear protein-coding sequences43
Incomplete lineage sorting and hybridization underlie tree discordance in Petunia and related genera (Petunieae, Solanaceae)41
Resolving the deep phylogeny: Implications for early adaptive radiation, cryptic, and present-day ecological diversity of Papuan microhylid frogs36
Phylogenomics and biogeography of arid-adapted Chlamydogobius goby fishes36
Peering through the hedge: Multiple datasets yield insights into the phylogenetic relationships and incongruences in the tribe Lilieae (Liliaceae)36
Recent evolution of extreme sexual dimorphism in the huia (Heteralocha acutirostris; Callaeidae)34
The systematics and evolution of the Sri Lankan rainforest land snail Corilla: New insights from RADseq-based phylogenetics31
Phylogeny and historical biogeography of the pantropical genus Parkia (Leguminosae, Caesalpinioideae, mimosoid clade)31
When colors mislead: Genomics and bioacoustics prompt re-classification of Asian flycatcher radiation (Aves: Niltavinae)31
Machine learning can be as good as maximum likelihood when reconstructing phylogenetic trees and determining the best evolutionary model on four taxon alignments31
Disconnecting trapdoors: Phylogenomic analyses reveal evolutionary contrasts in trapdoor spiders with intercontinental distribution (Idiopidae, Idiopinae)30
Population genomics indicate three different modes of divergence and speciation with gene flow in the green-winged teal duck complex29
ModelRevelator: Fast phylogenetic model estimation via deep learning29
The evolution of primate malaria parasites: A study on the origin and diversification of Plasmodium in lemurs28
Repeat-based phylogenomics shed light on unclear relationships in the monocentric genus Juncus L. (Juncaceae)28
Maturyoshka: A maturase inside a maturase, and other peculiarities of the novel chloroplast genomes of marine euglenophytes28
Molecular phylogenetics of sub-Saharan African natricine snakes, and the biogeographic origins of the Seychelles endemic Lycognathophis seychellensis27
Phylotranscriptomic relationships of the Oophila clade of green algae associated to amphibian egg masses27
Genomic phylogeography of the White-crowned Manakin Pseudopipra pipra (Aves: Pipridae) illuminates a continental-scale radiation out of the Andes26
Phylogenomic reconstruction of Solenogastres (Mollusca, Aplacophora) informs hypotheses on body size evolution26
Corrigendum to “Phylogeography, hybridization, and species discovery in the Etheostoma nigrum complex (Percidae: Etheostoma: Boleosoma)” [Mol. Phylogenet. Evol. 178 (2023) 107645]26
Redefining Chlorobotryaceae as one of the principal and most diverse lineages of eustigmatophyte algae25
Plastid-nuclear coevolution of ribosomal protein genes in papilionoid legumes25
Genomic phylogeography illuminates deep cyto-nuclear discordances in midwife toads (Alytes)25
Evolution, range formation and a revised taxonomy of the disjunctly distributed European members of Astragalus sect. Caprini, an intricate group including highly endangered species of dry grasslands25
Whole genome phylogenomics helps to resolve the phylogenetic position of the Zygothrica genus group (Diptera, Drosophilidae) and the causes of previous incongruences25
Substrate specialisation drives an unexpectedly diverse radiation in barking geckos (Ptenopus: Gekkonidae)24
Gauging ages of tiger swallowtail butterflies using alternate SNP analyses24
Temporal and spatial diversification along the Amazonia-Cerrado transition in Neotropical treefrogs of the Boana albopunctata species group24
Phylogenetics and the evolution of terrestriality in mudskippers (Gobiidae: Oxudercinae)23
Recurrent founder-event speciation across the Mediterranean likely shaped the species diversity and geographic distribution of the freshwater snail genus Mercuria Boeters, 1971 (Caenogastropoda: Hydro23
Phylogeny and historical biogeography of neotropical catfishes Trichomycterus (Siluriformes: Trichomycteridae) from eastern Brazil23
Scaling the high latitudes: evolution, diversification, and dispersal of Coryphella nudibranchs across the Northern Hemisphere23
Phylogenomics and taxon-rich phylogenies of new and historical specimens shed light on the systematics of Hypnea (Cystocloniaceae, Rhodophyta)23
Nuclear phylogenomics of Eperua (Leguminosae) highlights the role of habitat and morphological lability in dispersal and diversification across Amazonia and in the Caatinga-Cerrado ecotone23
Phylogenomics and divergence pattern of Polygonatum (Asparagaceae: Polygonateae) in the north temperate region23
Phylogenomics and biogeography of sawflies and woodwasps (Hymenoptera, Symphyta)23
Comprehensive taxon sampling and vetted fossils help clarify the time tree of shorebirds (Aves, Charadriiformes)23
Genomic SNPs resolve the phylogeny of an ancient amphibian island radiation from the Seychelles23
Geological events and climate change drive diversification and speciation of mute cicadas in eastern continental Asia23
Cenozoic colonisation of the Indian Ocean region by the Australian freshwater-originating glassperch family Ambassidae (Teleostei)22
Congruent patterns of cryptic cladogenesis revealed using RADseq and Sanger sequencing in a velvet worm species complex (Onychophora: Peripatopsidae: Peripatopsis sedgwicki)22
Phylogenetic relationships and historical biogeography of silkmoths (Lepidoptera: Bombycidae) suggest an origin in Southern Gondwana22
Corrigendum to “Molecular systematics and global phylogeography of angel sharks (genus Squatina)” [Mol. Phylogenetics Evol. 54 (2010) 395–404]22
Ocean crossers: A tale of disjunctions and speciation in the dwarf-fruticose Lichina (lichenized Ascomycota)22
Molecular phylogenetics of the fresh water sleepers Odontobutis (Gobiiformes: Odontobutidae) and its implications on biogeography of freshwater ichthyofauna of East Asia22
Phylogenetic placement and species delimitation of the crab spider genus Phrynarachne (Araneae: Thomisidae) from China22
Molecular phylogeny of deep-sea blind lobsters of the family Polychelidae (Decapoda: Polychelida), with implications for the origin and evolution of these “living fossils”22
Phylogenetic relationships of the Geoplaninae land planarians (Platyhelminthes, Tricladida) assessed with a total evidence approach, with the description of a new species of Gigantea22
Dynamics and timing of diversification events of ciliated eukaryotes from a large phylogenomic perspective21
Deconstructing Difflugia: The tangled evolution of lobose testate amoebae shells (Amoebozoa: Arcellinida) illustrates the importance of convergent evolution in protist phylogeny21
Plastid phylogenomics of the Sansevieria Clade of Dracaena (Asparagaceae) resolves a recent radiation21
Plastid phylogenomic analyses of Fagales reveal signatures of conflict and ancient chloroplast capture21
Shining new light on naupliar eyes: A novel molecular phylogeny for Pleuromamma (Family: Metridinidae) and the characterization of luciferase and opsin expression21
A genomic survey of LINE elements in Pipidae aquatic frogs shed light on Rex-elements evolution in these genomes21
Interspecific gene flow obscures phylogenetic relationships in an important insect pest species complex21
Editorial Board21
Molecular phylogeny, historical biogeography, and classification of Pseudocoladenia butterflies (Lepidoptera: Hesperiidae)21
The phylogeny and evolutionary ecology of hoverflies (Diptera: Syrphidae) inferred from mitochondrial genomes20
Study of epiphytic non-geniculate coralline algae Reveals an Evolutionarily significant Genus, Pseudoderma gen. nov. (Lithophylloideae, Corallinophycidae)20
Phylogeny and secondary sexual trait evolution in Schizocosa wolf spiders (Araneae, Lycosidae) shows evidence for multiple gains and losses of ornamentation and species delimitation uncertainty20
Genomic insights into the biogeography and evolution of Galápagos iguanas20
Molecular evolutionary analyses of tooth genes support sequential loss of enamel and teeth in baleen whales (Mysticeti)20
Phylogenomics AND biogeography of Castanea (chestnut) and Hamamelis (witch-hazel) – Choosing between RAD-seq and Hyb-Seq approaches20
SNP-based phylogenomic inference in Holarctic ground squirrels (Urocitellus)20
A new bunting species in South China revealed by an integrative taxonomic investigation of the Emberiza godlewskii complex (Aves, Emberidae)20
A global phylogeny of the deep-sea gastropod family Scaphandridae (Heterobranchia: Cephalaspidea): Redefinition and generic classification20
Biogeography, reproductive biology and phylogenetic divergence within the Fungiidae (mushroom corals)19
A multi-gene phylogenetic analysis of the leafhopper subfamily Typhlocybinae (Hemiptera: Cicadellidae) challenges the traditional view of the evolution of wing venation19
Gone with Gondwana: Amphipod diversification in freshwaters followed the breakup of the supercontinent19
Multiple independent losses of cell mouth in phylogenetically distant endosymbiotic lineages of oligohymenophorean ciliates: A lesson from Clausilocola19
The Sela macaque (Macaca selai) is a distinct phylogenetic species that evolved from the Arunachal macaque following allopatric speciation19
Editorial Board19
Geological and climatic influences on population differentiation of the Phrynocephalus vlangalii species complex (Sauria: Agamidae) in the northern Qinghai-Tibet Plateau19
Phylogenomics resolves ambiguous relationships within Aciculata (Errantia, Annelida)19
Adaptive radiation and speciation in Rhipicephalus ticks: A medley of novel hosts, nested predator-prey food webs, off-host periods and dispersal along temperature variation gradients19
A phylotranscriptome study using silica gel-dried leaf tissues produces an updated robust phylogeny of Ranunculaceae19
The hybridization origin of the Chinese endemic herb genus Notopterygium (Apiaceae): Evidence from population genomics and ecological niche analysis19
Diversity of Brachionus plicatilis species complex (Rotifera) in inland saline waters from China: Presence of a new mitochondrial clade on the Tibetan Plateau19
Editorial Board19
Under the hood: Phylogenomics of hooded tick spiders (Arachnida, Ricinulei) uncovers discordance between morphology and molecules18
Deeply divergent freshwater fish species within a single river system in central Sulawesi18
Rearranging and completing the puzzle: Phylogenomic analysis of bark beetles Dendroctonus reveals new hypotheses about genus diversification18
Corrigendum to “Molecular phylogeny and trait evolution in an ancient terrestrial arthropod lineage: Systematic revision and implications for ecological divergence (Collembola, Tomocerinae)” [Mol. Phy18
Phylogeny and biogeography of harmochirine jumping spiders (Araneae: Salticidae)18
Macroevolutionary analyses point to a key role of hosts in diversification of the highly speciose eriophyoid mite superfamily18
Novel mating-type-associated genes and gene fragments in the genomes of Mycosphaerellaceae and Teratosphaeriaceae fungi18
Out of the desert: Paleoclimatic changes drove the diversification of arid-adapted Ocymyrmex ants in southern Africa18
Endogean habits drove cryptic diversification in Appalachian Lathrobium Gravenhorst (Coleoptera, Staphylinidae)18
Population structure in Mixornis tit-babblers across Sunda Shelf matches interfluvia of paleo-rivers18
A new species of Populus and the extensive hybrid speciation arising from it on the Qinghai-Tibet Plateau18
Phylogenomic analysis of Stylops reveals the evolutionary history of a Holarctic Strepsiptera radiation parasitizing wild bees18
Editorial Board18
Following the aridity: Historical biogeography and diversification of the Philodromidae spider genus Petrichus in South America17
Identifying a potentially invasive population in the native range of a species: The enlightenment from the phylogeography of the yellow spotted stink bug, Erthesina fullo (Hemiptera: Pentatomidae)17
Peeling back the layers: First phylogenomic insights into the Ledebouriinae (Scilloideae, Asparagaceae)17
Phylogeny of Micronesian emperor fishes and evolution of trophic types17
Integrative approach to species delimitation in Rhizophydiales: Novel species of Angulomyces, Gorgonomyces, and Terramyces from northern Thailand17
Exceptional levels of species discovery ameliorate inferences of the biogeography and diversification of an Afrotropical catfish family17
Expanding Acutuncus: Phylogenetics and morphological analyses reveal a considerably wider distribution for this tardigrade genus17
Novel oceanic cyanobacterium isolated from Bangaram island with profound acid neutralizing ability is proposed as Leptolyngbya iicbica sp. nov. strain LK17
Editorial Board17
How many long branch orders occur in Chelicerata? Opposing effects of Palpigradi and Opilioacariformes on phylogenetic stability17
Phylogenetic relationships and the origin of New World soles (Teleostei: Pleuronectiformes: Achiridae): The role of estuarine habitats16
Genomic data provide a robust phylogeny backbone for Rhodiola L. (Crassulaceae) and reveal extensive reticulate evolution during its rapid radiation16
Integrative phylogenetic, phylogeographic and morphological characterisation of the Unio crassus species complex reveals cryptic diversity with important conservation implications16
Single cell transcriptomics reveals UAR codon reassignment in Palmarella salina (Metopida, Armophorea) and confirms Armophorida belongs to APM clade16
New evidence of consistency between phylogeny and morphology for two taxa in ciliated protists, the subclasses Oligotrichia and Choreotrichia (Protista, Ciliophora)16
Multi-locus phylogeny with dense Guiana Shield sampling supports new suprageneric classification of the neotropical three-barbeled catfishes (Siluriformes: Heptapteridae)16
A story of vicariance? how the geology of oceanic archipelagos influenced the evolutionary history of endemic damselflies16
Phylogeny and evolution of dissimilatory sulfite reduction in prokaryotes16
Phylogenomics and historical biogeography of West Indian Rock Iguanas (genus Cyclura)16
Plastid phylogenomic analyses of the Selaginella sanguinolenta group (Selaginellaceae) reveal conflict signatures resulting from sequence types, outlier genes, and pervasive RNA editing16
Ecological speciation by sympatric host shifts in a clade of herbivorous sea slugs, with introgression and localized mitochondrial capture between species16
Explosion of goby fish diversity at the Eocene-Oligocene transition15
Phylogenomic loci define the generic boundaries of Gochnatieae and improve resolution at the species level in Moquiniastrum (Compositae)15
A model of hybrid speciation process drawn from three new poplar species originating from distant hybridization between sections15
Evolution of andrenine bees reveals a long and complex history of faunal interchanges through the Americas during the Mesozoic and Cenozoic15
Imperiled wanderlust lichens in steppe habitats of western North America comprise geographically structured mycobiont lineages and a reversal to sexual reproduction within this asexual clade15
Phylogeny, origin, and dispersal of Dubyaea (Asteraceae) based on Hyb-Seq data15
A thorny tale: The origin and diversification of Cirsium (Compositae)15
Population genomics of the southern giraffe15
Diversification of the sleepers (Gobiiformes: Gobioidei: Eleotridae) and evolution of the root gobioid families15
Large-scale phylogenomics of the genus Macrostomum (Platyhelminthes) reveals cryptic diversity and novel sexual traits15
The performance of outgroup-free rooting under evolutionary radiations15
Molecular phylogeny, classification, biogeography and diversification patterns of a diverse group of moths (Geometridae: Boarmiini)15
Plastid phylogenomics of the tribe potentilleae (Rosaceae)15
Ultraconserved elements-based phylogenomic systematics of the snake superfamily Elapoidea, with the description of a new Afro-Asian family14
In the land of the blind: Exceptional subterranean speciation of cryptic troglobitic spiders of the genus Tegenaria (Araneae: Agelenidae) in Israel14
Exclusion of fast evolving genes or fast evolving sites produces different archaean phylogenies14
Phylogenomic analysis, reclassification, and evolution of South American nemesioid burrowing mygalomorph spiders14
Out of Asia: Intercontinental dispersals after the Eocene-Oligocene transition shaped the zoogeography of Limenitidinae butterflies (Lepidoptera: Nymphalidae)14
A global blueberry phylogeny: Evolution, diversification, and biogeography of Vaccinieae (Ericaceae)14
Nuclear phylogenies and genomics of a contact zone establish the species rank of Podarcis lusitanicus (Squamata, Lacertidae)14
Molecular phylogenetics of the Clupeiformes based on exon-capture data and a new classification of the order14
Mixed, not stirred: Genomic data confirm the first case of interspecific hybridization in planarian triclads (Platyhelminthes: Tricladida) and raise questions about a possibly novel form of hybrid spe14
Phylogenetic systematics of Yphthimoides Forster, 1964 and related taxa, with notes on the biogeographical history of Yphthimoides species14
Genomic and phenotypic characterization of Thermosynechococcus-like strains reveals eight species within the genus Thermosynechococcus and a novel genus Parathermosynechococcus gen. nov.14
Phylogenomic conflict analyses of the plastid and mitochondrial genomes via deep genome skimming highlight their independent evolutionary histories: A case study in the cinquefoil genus Potentilla sen14
Skeleton phylogeny reconstructed with transcriptomes for the tribe Drosophilini (Diptera: Drosophilidae)14
Phylogenetic revision of the lichenized family Gomphillaceae (Ascomycota: Graphidales) suggests post-K–Pg boundary diversification and phylogenetic signal in asexual reproductive structures14
Phylogenomics offers new insights into the classification of Phytoseiidae (Acari: Mesostigmata)13
Phylogenetic origin of dioecious Callicarpa (Lamiaceae) species endemic to the Ogasawara Islands revealed by chloroplast and nuclear whole genome analyses13
Independent recruitment of FRUITFULL-like transcription factors in the convergent origins of vernalization-responsive grass flowering13
A taxonomist‘s nightmare – Cryptic diversity in Caribbean intertidal arthropods (Arachnida, Acari, Oribatida)13
Out of southern Africa: Origins and cryptic speciation in Chamaeleo, the most widespread chameleon genus13
The apicoplast of Haemoproteus columbae: A comparative study of this organelle genome in Haemosporida13
Hidden species diversity and mito-nuclear discordance within the Mediterranean cone snail, Lautoconus ventricosus13
Paraphyly and cryptic diversity unveils unexpected challenges in the “naked lichens” (Calvitimela, Lecanoromycetes, Ascomycota)13
Historical DNA solves century-old mystery on sessility in freshwater gastropods13
Phylogenomic analyses of hamsters (Cricetinae) inferred from GBS data and mitochondrial genomes13
Evaluating species boundaries using coalescent delimitation in pine-killing Monochamus (Coleoptera: Cerambycidae) sawyer beetles13
Integrative taxonomy of the subfamily Orbioninae (Crustacea: Isopoda) based on mitochondrial and nuclear data with evidence that supports Epicaridea as a suborder13
Global diversification and evolutionary history of onchidiid slugs (Gastropoda, Pulmonata)13
Phylogenomic evolutionary insights in the fern family Gleicheniaceae13
Phylogenomics and diversification drivers of the Eastern Asian – Eastern North American disjunct Podophylloideae13
Patterns of diversification of the operculate land snail genus Cyclophorus (Caenogastropoda: Cyclophoridae) on the Ryukyu Islands, Japan13
Integrative taxonomy in a rapid speciation group associated with mating system transition: A case study in the Primula cicutariifolia complex13
Phylogenomics and morphology of Celmisiinae (Asteraceae: Astereae): Taxonomic and evolutionary implications13
Phylogenomic resolution of the Ceratitis FARQ complex (Diptera: Tephritidae)12
Whole genome sequencing and comparative genomics analysis of Pectobacterium carotovorum identifies key pathogenic genes12
Two new tardigrade genera from New Zealand’s Southern Alp glaciers display morphological stasis and parallel evolution12
When lizards shift to a more plant-based lifestyle: The macroevolution of mutualistic lizard-plant-interactions (Squamata: Sauria/Lacertilia)12
Australia’s hidden radiation: Phylogenomics analysis reveals rapid Miocene radiation of blindsnakes12
Multi-locus phylogeny and species delimitations of the striped-back shrew group (Eulipotyphla: Soricidae): Implications for cryptic diversity, taxonomy and multiple speciation patterns12
Editorial Board12
Out of the ancient lake: Multiple riverine colonizations and diversification of the freshwater snails in the genus Semisulcospira around Lake Biwa12
Corrigendum to “Unravelling unknown cyanobacteria diversity linked with HCN production” [Mol. Phylogenet. Evol. 166 (2022) 107322]12
The phylogeny and global biogeography of Primulaceae based on high-throughput DNA sequence data12
Plastome structure, evolution, and phylogeny of Selaginella12
A supermatrix phylogeny of the world’s bees (Hymenoptera: Anthophila)12
Genomic data reveal local endemism in Southern California Rubber Boas (Serpentes: Boidae, Charina) and the critical need for enhanced conservation actions12
A comprehensive molecular phylogeny of the genus Sylvirana (Anura: Ranidae) highlights unrecognized diversity, revised classification and historical biogeography12
Phylogeny, character evolution, and biogeography of the fern genus Bolbitis (Dryopteridaceae)12
Diversification and evolutionary history of the African laminated-toothed rats (Rodentia, Otomyini)12
Molecular systematics and phylogenetics of the spider genus Mastigusa Menge, 1854 (Araneae, Cybaeidae)12
Diversity of Wolbachia infection and its influence on mitochondrial DNA variation in the diamondback moth, Plutella xylostella11
Monophyly of diverse Bigyromonadea and their impact on phylogenomic relationships within stramenopiles11
Phylogeny and evolution of morphological structures in a highly diverse lineage of fruiting-body-forming amoebae, order Trichiales (Myxomycetes, Amoebozoa)11
Genome skimming elucidates the evolutionary history of Octopoda11
Hyper-Cryptic radiation of a tropical montane plant lineage11
Species divergence and phylogeography of Corylus heterophylla Fisch complex (Betulaceae): Inferred from molecular, climatic and morphological data11
The role of introgressive hybridization in shaping the geographically isolated gene pools of wax palm populations (genus Ceroxylon)11
Evolving in the darkness: Phylogenomics of Sinocyclocheilus cavefishes highlights recent diversification and cryptic diversity11
Convergent evolution in nuclear and mitochondrial OXPHOS subunits underlies the phylogenetic discordance in deep lineages of Squamata11
Abundant incongruence in a clade endemic to a biodiversity hotspot: Phylogenetics of the scrub mint clade (Lamiaceae)11
Cytonuclear discordance in the crowned-sparrows, Zonotrichia atricapilla and Zonotrichia leucophrys11
The phylogenomics and evolutionary dynamics of the organellar genomes in carnivorous Utricularia and Genlisea species (Lentibulariaceae)11
Phylogenomics and genome size evolution in Amomum s. s. (Zingiberaceae): Comparison of traditional and modern sequencing methods11
Horizontally transferred glycoside hydrolase 26 may aid hemipteran insects in plant tissue digestion11
Unique environmental Symbiodiniaceae diversity at an isolated island in the northwestern Pacific11
Deciphering phylogenetic relationships of and delimiting species boundaries within the controversial ciliate genus Conchophthirus using an integrative morpho-evo approach11
Molecular phylogenetics reveals the evolutionary history of marine fishes (Actinopterygii) endemic to the subtropical islands of the Southwest Pacific11
Editorial Board11
Phylogenomics of Anguis and Pseudopus (Squamata, Anguidae) indicates Balkan-Apennine mitochondrial capture associated with the Messinian event11
Whole-genome characterization and comparative genomics of a novel freshwater cyanobacteria species: Pseudanabaena punensis11
Phylogenomic analyses of ochrophytes (stramenopiles) with an emphasis on neglected lineages11
Biogeography and evolution of social parasitism in Australian Myrmecia bulldog ants revealed by phylogenomics11
Molecular phylogeny and divergence time of Harpalyce (Leguminosae, Papilionoideae), a lineage with amphitropical diversification in seasonally dry forests and savannas11
Intra-island patterns of cryptic diversity within an oceanic island: Insights from the differentiation of Schizidium Verhoeff, 1901 (Oniscidea, Armadillidiidae) within Cyprus, with descriptions of two11
Phylogenomics reveals ancient and contemporary gene flow contributing to the evolutionary history of sea ducks (Tribe Mergini)11
Jumping through hoops: Structural rearrangements and accelerated mutation rates on Dendrodorididae (Mollusca: Nudibranchia) mitogenomes rumble their evolution11
An ultraconserved element probe set for velvet worms (Onychophora)11
Phylogenomic and morphological evidence supports the reinstatement of the bamboo genus Clavinodum from Oligostachyum (Poaceae: Bambusoideae)11
Evolution of the Sabulina verna group (Caryophyllaceae) in Europe: A deep split, followed by secondary contacts, multiple allopolyploidization and colonization of challenging substrates11
Phylogenomic systematics of the spotted skunks (Carnivora, Mephitidae, Spilogale): Additional species diversity and Pleistocene climate change as a major driver of diversification11
A new molecular phylogeny for the Tanypodinae (Diptera: Chironomidae) places the Australian diversity in a global context11
Disentangling conflicting molecular phylogenetic signals in nuclear and plastid DNA of the western Eurasian-Mediterranean grass genus Cynosurus and its relatives (Poaceae subtribes Cynosurinae and Par11
Taxonomic insights and evolutionary history in East Asian terrestrial slugs of the genus Meghimatium10
A straightforward workflow to explore species diversity using the Patagonian lizards of the Diplolaemus genus (Iguania: Leiosauridae) as a study case, with the description of a new species10
Multiple origins of two Ochrosia (Apocynaceae) species endemic to the Bonin (Ogasawara) Islands10
Systematic position of the Clicking Frog (Kassinula Laurent, 1940), the problem of chimeric sequences and the revised classification of the family Hyperoliidae10
Genotyping-by-sequencing elucidates the species limits of Ukrainian taxa within Veronica subg. Pseudolysimachium10
Phylogenetics and an updated taxonomic status of the Tamarins (Callitrichinae, Cebidae)10
Diversification dynamics of a common deep-sea octocoral family linked to the Paleocene-Eocene thermal maximum10
Evolutionary history of the Pelasgus minnows (Teleostei: Leuciscidae), an ancient endemic genus from the Balkan Peninsula10
A multi-gene phylogeny of the Asian kukri snakes (Oligodon Fitzinger, 1826): Sharpening the blade of the second largest serpent radiation (Reptilia: Squamata: Colubridae)10
Molecular phylogenetics, speciation, and long distance dispersal in tardigrade evolution: A case study of the genus Milnesium10
Diversification in the mountains: Evolutionary history and molecular phylogeny of Anatolian rock lizards10
Species delimitation using genomic data to resolve taxonomic uncertainties in a speciation continuum of pelagic seabirds10
A subfunctionalisation model of gene family evolution predicts balanced tree shapes10
Editorial Board10
Editorial Board10
A transcriptome-based phylogeny for Polynoidae (Annelida: Aphroditiformia)10
Plastid phylogenomics improves resolution of phylogenetic relationship in the Cheirostylis and Goodyera clades of Goodyerinae (Orchidoideae, Orchidaceae)10
In and out: Evolution of viral sequences in the mitochondrial genomes of legumes (Fabaceae)10
Population connectivity across a highly fragmented distribution: Phylogeography of the Chalcophaps doves10
Phylogenomics resolves the puzzling phylogeny of banded newts (genus Ommatotriton)10
Phylogeny and time scale of diversification in the fossil-rich sunfishes and black basses (Teleostei: Percomorpha: Centrarchidae)10
Phylogenomic insights into the historical biogeography, character-state evolution, and species diversification rates of Cypripedioideae (Orchidaceae)10
Phylogenomic workflow for uncultivable microbial eukaryotes using single-cell RNA sequencing − A case study with planktonic ciliates (Ciliophora, Oligotrichea)10
Phylogeography of recent Plesiastrea (Scleractinia: Plesiastreidae) based on an integrated taxonomic approach10
Interpreting phylogenetic conflict: Hybridization in the most speciose genus of lichen-forming fungi10
Diversification of freshwater crabs on the sky islands in the Hengduan Mountains Region, China10
Molecular phylogeny and systematics of bald uakaris, genus Cacajao (Primates: Pitheciidae), with the description of a new species10
The genome of the lowland anoa (Bubalus depressicornis) illuminates the origin of river and swamp buffalo10
The phylogeny and divergence times of leaf-mining flies (Diptera: Agromyzidae) from anchored phylogenomics10
Editorial Board10
Out of the Himalaya-Hengduan Mountains: Phylogenomics, biogeography and diversification of Polygonatum Mill. (Asparagaceae) in the Northern Hemisphere10
Plastomes in the holoparasitic family Balanophoraceae: Extremely high AT content, severe gene content reduction, and two independent genetic code changes10
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