Journal of the American Medical Informatics Association

Article	Citations
“Goldmine” or “big mess”? An interview study on the challenges of designing, operating, and ensuring the durability of Clinical Data Warehouses in France and Belgium	261
Designing visual hierarchies for the communication of health data	118
Transparent deep learning to identify autism spectrum disorders (ASD) in EHR using clinical notes	111
Enhancing patient representation learning with inferred family pedigrees improves disease risk prediction	106
Multi-faceted analysis and prediction for the outbreak of pediatric respiratory syncytial virus	72
Utilizing patient-nurse verbal communication in building risk identification models: the missing critical data stream in home healthcare	67
Self-supervised machine learning using adult inpatient data produces effective models for pediatric clinical prediction tasks	66
Uncovering hidden trends: identifying time trajectories in risk factors documented in clinical notes and predicting hospitalizations and emergency department visits during home health care	65
Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions	63
A framework for understanding label leakage in machine learning for health care	60
Using Twitter data to understand public perceptions of approved versus off-label use for COVID-19-related medications	59
The added value of text from Dutch general practitioner notes in predictive modeling	56
What did you do to avoid the climate disaster? A call to arms for health informatics	54
Building an allergy reconciliation module to eliminate allergy discrepancies in electronic health records	52
Evaluating resources composing the PheMAP knowledge base to enhance high-throughput phenotyping	49
Association between state payment parity policies and telehealth usage at community health centers during COVID-19	45
Challenges using electronic health records to support unhealthy alcohol use screening and intervention in primary care practices in the Pacific Northwest	44
All of whom? Limitations encountered using All of Us Researcher Workbench in a Primary Care residents secondary data analysis research training block	43
CARE-SD: classifier-based analysis for recognizing provider stigmatizing and doubt marker labels in electronic health records: model development and validation	40
Identifying family structures from obituaries and matching them to patients in an electronic heath record	39
Efficacy of the mLab App: a randomized clinical trial for increasing HIV testing uptake using mobile technology	37
Reformulating patient stratification for targeting interventions by accounting for severity of downstream outcomes resulting from disease onset: a case study in sepsis	36
Clickbusters letter response	36
Comparing penalization methods for linear models on large observational health data	36
Foundational domains and competencies for baccalaureate health informatics education	35

Distributed, immutable, and transparent biomedical limited data set request management on multi-capacity network	35
Predicting mortality in hospitalized influenza patients: integration of deep learning-based chest X-ray severity score (FluDeep-XR) and clinical variables	33
Variations in digital health literacy for pediatric caregivers of hospitalized children: implications for digital health equity	32
Data-driven automated classification algorithms for acute health conditions: applying PheNorm to COVID-19 disease	32
The role of health system penetration rate in estimating the prevalence of type 1 diabetes in children and adolescents using electronic health records	31
Developing electronic clinical quality measures to assess the cancer diagnostic process	31
Retrospective analysis of the impact of electronic medical record alerts on low value care in a pediatric hospital	31
Electronic health record-supported implementation of an evidence-based pathway for perioperative surgical care	30
Regulation of artificial intelligence in healthcare: Clinical Laboratory Improvement Amendments (CLIA) as a model	30
Association of physician burnout with perceived EHR work stress and potentially actionable factors	29
Letter to the editors in response to “Leveraging artificial intelligence to summarize abstracts in lay language for increasing research accessibility and transparency”	29
The incremental design of a machine learning framework for medical records processing	29
Using automated methods to detect safety problems with health information technology: a scoping review	29
Tablet distribution to veterans: an opportunity to increase patient portal adoption and use	28
RefAI: a GPT-powered retrieval-augmented generative tool for biomedical literature recommendation and summarization	28
Growth curve modeling of virtual events and online engagement in a palliative care peer support online health community for adolescents and young adults	28
Reply to Layne et al.’s Letter to the Editor	28
The ongoing French BaMaRa-BNDMR cohort: implementation and deployment of a nationwide information system on rare disease	26
CDEMapper: enhancing National Institutes of Health common data element use with large language models	26
Deep learning algorithms to detect diabetic kidney disease from retinal photographs in multiethnic populations with diabetes	25
Preparing for the bedside—optimizing a postpartum depression risk prediction model for clinical implementation in a health system	25
Accuracy of ICD-10-CM encounter diagnoses from health records for identifying self-harm events	25
Long-term care plan recommendation for older adults with disabilities: a bipartite graph transformer and self-supervised approach	25
Equity implications of extended reality technologies for health and procedural anxiety: a systematic review and implementation-focused framework	24
Development and validation of a multi-stage self-supervised learning model for optical coherence tomography image classification	24
Automatically pre-screening patients for the rare disease aromatic l-amino acid decarboxylase deficiency using knowledge engineering, natural language processing, and machine learning on a	23
Clinical decision support malfunctions related to medication routes: a case series	23
Digital interventions for antimicrobial prescribing and monitoring: a qualitative meta-synthesis of factors influencing user acceptance	23
High-performance automated abstract screening with large language model ensembles	23
Variation in pediatric and adolescent electronic health data sharing practices under the 21st Century Cures Act	23
Prediction of multiclass surgical outcomes in glaucoma using multimodal deep learning based on free-text operative notes and structured EHR data	22
Comparative effectiveness of generic commercial versus locally customized clinical decision support tools to reduce prescription of nonsteroidal anti-inflammatory drugs for patients with heart failure	22
AMIA’s code of professional and ethical conduct 2022	22
Characterizing variability of electronic health record-driven phenotype definitions	22
Generative AI in orthopedics: an explainable deep few-shot image augmentation pipeline for plain knee radiographs and Kellgren-Lawrence grading	22
Deploying a national clinical text processing infrastructure	22
myAURA: a personalized health library for epilepsy management via knowledge graph sparsification and visualization	22
Constructing knowledge: the role of AI in medical learning	22
Patient and researcher stakeholder preferences for use of electronic health record data: a qualitative study to guide the design and development of a platform to honor patient preferences	22
Machine learning-based prediction models in medical decision-making in kidney disease: patient, caregiver, and clinician perspectives on trust and appropriate use	21
Returning value to the community through the All of Us Research Program Data Sandbox model	21
AI in health: keeping the human in the loop	21
Exploring home healthcare clinicians’ needs for using clinical decision support systems for early risk warning	21
Bridging the gap in author names: building an enhanced author name dataset for biomedical literature system	21
Learning competing risks across multiple hospitals: one-shot distributed algorithms	20
Can large language models provide secondary reliable opinion on treatment options for dermatological diseases?	20
Comparison of phenomic profiles in the All of Us Research Program against the US general population and the UK Biobank	20
Potential bias and lack of generalizability in electronic health record data: reflections on health equity from the National Institutes of Health Pragmatic Trials Collaboratory	20
Identifying stigmatizing and positive/preferred language in obstetric clinical notes using natural language processing	20
Dobbs and the future of health data privacy for patients and healthcare organizations	20

JAMIA at 30: looking back and forward	19
Real world performance of the 21st Century Cures Act population-level application programming interface	19
Seeing things the same way: perspectives and lessons learned from research-design collaborations	19
The substance-exposed birthing person-infant/child dyad and health information exchange in the United States	19
Reducing diagnostic delays in acute hepatic porphyria using health records data and machine learning	19
Correction to: Association between state payment parity policies and telehealth usage at community health centers during COVID-19	19
Performance drift in a mortality prediction algorithm among patients with cancer during the SARS-CoV-2 pandemic	19
Acute myocardial infarction prognosis prediction with reliable and interpretable artificial intelligence system	18
Targeted messaging to improve the adoption of clinical decision support for prescription drug monitoring program use	18
Knowledge infrastructure: a priority to accelerate workflow automation in health care	18
21st Century Cures Act: ethical recommendations for new patient-facing products	18
A span-based model for extracting overlapping PICO entities from randomized controlled trial publications	18
Do patients who read visit notes on the patient portal have a higher rate of “loop closure” on diagnostic tests and referrals in primary care? A retrospective cohort study	18
Leveraging explainable artificial intelligence to optimize clinical decision support	17
The value of parental medical records for the prediction of diabetes and cardiovascular disease: a novel method for generating and incorporating family histories	17
A call for better validation of opioid overdose risk algorithms	17
Disparities in seizure outcomes revealed by large language models	16
VIEWER: an extensible visual analytics framework for enhancing mental healthcare	16
Informatics innovation to provide return of value to participant communities in the All of Us Research Program	16
PMC-LLaMA: toward building open-source language models for medicine	16
Correction to: De-black-boxing health AI: demonstrating reproducible machine learning computable phenotypes using the N3C-RECOVER Long COVID model in the All of Us data repository	16
Supporting clinical reasoning through visual summarization and presentation of patient data: a systematic review	16
Using electronic health record audit log data for research: insights from early efforts	16
Electronic health record “gag clauses” and the prevalence of screenshots in peer-reviewed literature	16
Perspectives on the role of industry in informatics research and authorship	16
A novel hyperparameter search approach for accuracy and simplicity in disease prediction risk scoring	15
Correction to: Deep learning algorithms to detect diabetic kidney disease from retinal photographs in multiethnic populations with diabetes	15
Using event logs to observe interactions with electronic health records: an updated scoping review shows increasing use of vendor-derived measures	15
A marker-based neural network system for extracting social determinants of health	15
Evaluating the validity of the nursing statements algorithmically generated based on the International Classifications of Nursing Practice for respiratory nursing care using large language models	15
Dementia and electronic health record phenotypes: a scoping review of available phenotypes and opportunities for future research	15
Promoting interoperability between SNOMED CT and ICD-11: lessons learned from the pilot project mapping between SNOMED CT and the ICD-11 Foundation	15
Computational simulation of the potential improvement in clinical outcomes of cardiovascular diseases with the use of a personalized predictive medicine approach	15
Harnessing the potential of large language models in medical education: promise and pitfalls	15
Communicating research findings as a return of value to All of Us Research Program participants: insights from staff at Federally Qualified Health Centers	14
Keeping synthetic patients on track: feedback mechanisms to mitigate performance drift in longitudinal health data simulation	14
Electronic patient-reported outcome measures for triaging and scheduling outpatient appointments: a systematic review and meta-analysis	14
Markov modeling for cost-effectiveness using federated health data network	14
Utilization patterns and efficiency gains from use of a fully EHR-integrated COVID-19 self-triage and self-scheduling tool: a retrospective analysis	14
Equitable community-based participatory research engagement with communities of color drives All of Us Wisconsin genomic research priorities	14
Local large language models for privacy-preserving accelerated review of historic echocardiogram reports	14
Integrating human-centered design in public health data dashboards: lessons from the development of a data dashboard of sexually transmitted infections in New York State	14
Machine learning-based infection diagnostic and prognostic models in post-acute care settings: a systematic review	14
Pivotal trial of a deep-learning-based retinal biomarker (Reti-CVD) in the prediction of cardiovascular disease: data from CMERC-HI	14
LEAP: LLM instruction-example adaptive prompting framework for biomedical relation extraction	14
Large language models for biomedicine: foundations, opportunities, challenges, and best practices	14
Correction to: In with the old, in with the new: machine learning for time to event biomedical research	14
LCD benchmark: long clinical document benchmark on mortality prediction for language models	14
Search still matters: information retrieval in the era of generative AI	13
Assessing the impact of privacy-preserving record linkage on record overlap and patient demographic and clinical characteristics in PCORnet®, the National Patient-Centered Clinical Research Network	13
Comprehension, utility, and preferences of prostate cancer survivors for visual timelines of patient-reported outcomes co-designed for limited graph literacy: meters and emojis over comics	13
BioInstruct: instruction tuning of large language models for biomedical natural language processing	13
Partnering with patients and families living with chronic conditions to coproduce diagnostic safety through OurDX: a previsit online engagement tool	13
Development of electronic health record based algorithms to identify individuals with diabetic retinopathy	13
Do electronic health record systems “dumb down” clinicians?	13
Nonexercise machine learning models for maximal oxygen uptake prediction in national population surveys	13
Automatic segmentation of atrial fibrillation and flutter in single-lead electrocardiograms by self-supervised learning and Transformer architecture	13
Selective prediction for extracting unstructured clinical data	13
Machine learning classification of diagnostic accuracy in pathologists interpreting breast biopsies	13
Impact of artificial intelligence on pathologists’ decisions: an experiment	13
The potential and limitations of large language models in identification of the states of motivations for facilitating health behavior change	13
A randomized controlled trial of generic and localized MedlinePlus-based information resources for hard-to-reach urban Hispanic community	13
Generating colloquial radiology reports with large language models	13
Leveraging large language models to foster equity in healthcare	13
Extracting social support and social isolation information from clinical psychiatry notes: comparing a rule-based natural language processing system and a large language model	13
The role of electronic health record developers in hospital patient sharing	13
Leveraging artificial intelligence to summarize abstracts in lay language for increasing research accessibility and transparency	13
PheMIME: an interactive web app and knowledge base for phenome-wide, multi-institutional multimorbidity analysis	12
Use of calibration to improve the precision of estimates obtained from All of Us data	12
Transforming and evaluating the UK Biobank to the OMOP Common Data Model for COVID-19 research and beyond	12
Mapping the delineation of practice to the AMIA foundational domains for applied health informatics	12
A national survey of digital health company experiences with electronic health record application programming interfaces	12
A novel approach to patient portal activation data to power equity improvements	12
Safety risks and workflow implications associated with nursing-related free-text communication orders	12
Translating and evaluating historic phenotyping algorithms using SNOMED CT	12
Visualizing machine learning-based predictions of postpartum depression risk for lay audiences	12
Trading-off privacy and utility: the Washington State experience assessing the performance of a public health digital exposure notification system for coronavirus disease 2019	12
Comparison of six natural language processing approaches to assessing firearm access in Veterans Health Administration electronic health records	12
Dynamic prediction of work status for workers with occupational injuries: assessing the value of longitudinal observations	12
Building a collaborative cloud platform to accelerate heart, lung, blood, and sleep research	12

National COVID Cohort Collaborative data enhancements: a path for expanding common data models	12
VACtrac: enhancing access immunization registry data for population outreach using the Bulk Fast Healthcare Interoperable Resource (FHIR) protocol	12
A perspective on individualized treatment effects estimation from time-series health data	12
Strengthening the use of artificial intelligence within healthcare delivery organizations: balancing regulatory compliance and patient safety	12
Combining uncertainty-aware predictive modeling and a bedtimeSmart Snackintervention to prevent nocturnal hypoglycemia in people with type 1 diabetes on multiple daily injections	12
Applying anti-racist approaches to informatics: a new lens on traditional frames	12
The impact of the COVID-19 pandemic on daily rhythms	12
Assessing health literacy and diversity within the All of Us Research Program	12
Methodologies and key considerations for implementing the International Classification of Diseases-11th revision morbidity coding: insights from a national pilot study in China	12
Scanning the medical phenome to identify new diagnoses after recovery from COVID-19 in a US cohort	12
Design of an interface to communicate artificial intelligence-based prognosis for patients with advanced solid tumors: a user-centered approach	12
Biomedical blockchain with practical implementations and quantitative evaluations: a systematic review	12
The use of artificial intelligence to optimize medication alerts generated by clinical decision support systems: a scoping review	12
“I don’t think it should take you three days to tell me my baby is dead.” A case of fetal demise: unintended consequences of immediate release of information	12
Community engagement in the development of health-related data visualizations: a scoping review	11
Considerations for development of child abuse and neglect phenotype with implications for reduction of racial bias: a qualitative study	11
Generating synthetic electronic health record data: a methodological scoping review with benchmarking on phenotype data and open-source software	11
Toward a unified understanding of drug-drug interactions: mapping Japanese drug codes to RxNorm concepts	11
Implementation and impact of an electronic patient reported outcomes system in a phase II multi-site adaptive platform clinical trial for early-stage breast cancer	11
Deep sequential neural network models improve stratification of suicide attempt risk among US veterans	11
Automated deidentification of radiology reports combining transformer and “hide in plain sight” rule-based methods	11
Correction to: Dobbs and the future of health data privacy for patients and healthcare organizations	11
Impact of wearable device data and multi-scale entropy analysis on improving hospital readmission prediction	11
Improving suicide risk prediction via targeted data fusion: proof of concept using medical claims data	11
CoRTEx: contrastive learning for representing terms via explanations with applications on constructing biomedical knowledge graphs	11
Ambient artificial intelligence scribes: physician burnout and perspectives on usability and documentation burden	11
Deployment of machine learning algorithms to predict sepsis: systematic review and application of the SALIENT clinical AI implementation framework	11
A messaging standard for environmental inspections: is it time?	10
Guidance for reporting analyses of metadata on electronic health record use	10
Identifying infected patients using semi-supervised and transfer learning	10
To the editor of JAMIA	10
Standards and frameworks	10
Use of chosen names in electronic health records to promote transgender inclusivity	10
Strengths, weaknesses, opportunities, and threats for the nation’s public health information systems infrastructure: synthesis of discussions from the 2022 ACMI Symposium	10
Machine learning approaches for electronic health records phenotyping: a methodical review	10
Enhancing the nation’s public health information infrastructure: a report from the ACMI symposium	10
An interactive fitness-for-use data completeness tool to assess activity tracker data	10
Digital vaccine passports and digital health diplomacy: an online model WHO simulation	10
Is the patient speaking or the nurse? Automatic speaker type identification in patient–nurse audio recordings	10
A question-answering framework for automated abstract screening using large language models	10
Innovative informatics interventions to improve health and health care	10
FairICP: identifying biases and increasing transparency at the point of care in post-implementation clinical decision support using inductive conformal prediction	10
Beyond the individual	10
Post-implementation optimization of medication alerts in hospital computerized provider order entry systems: a scoping review	10
Bridging the digital health divide—patient experiences with mobile integrated health and facilitated telehealth by community-level indicators of health disparity	10
Social media use and mental health among older adults with multimorbidity: the role of self-care efficacy	9
A call for the informatics community to define priority practice and research areas at the intersection of climate and health: report from 2023 mini-summit	9
Beyond Phecodes: leveraging PheMAP to identify patients lacking diagnosis codes in electronic health records	9
In vitro to in vivo translation of artificial intelligence for clinical use: screening for acute coronary syndrome to identify ST-elevation myocardial infarction	9
Correction to: Barriers and facilitators to the implementation of family cancer history collection tools in oncology clinical practices	9
Engaging the next generation of physician–informaticians through early exposure to the field: successes and challenges associated with starting a novel clinical informatics interest group	9
Reflections on interactive visualization of electronic health records: past, present, future	9
Will clinical standards not be part of the choir? Harmonization between the HL7 gender harmony project model and the NASEM measuring sex, gender identity, and sexual orientation report in the United S	9
A powerful partnership: researchers and patients working together to develop a patient-facing summary of clinical trial outcome data	9
REDCap and the National Mesothelioma Virtual Bank—a scalable and sustainable model for rare disease biorepositories	9
Curating a longitudinal research resource using linked primary care EHR data—a UK Biobank case study	9
Revisions to the Safety Assurance Factors for Electronic Health Record Resilience (SAFER) Guides to update national recommendations for safe use of electronic health records	9
Evaluating the accuracy of a state-of-the-art large language model for prediction of admissions from the emergency room	9
Generating synthetic mixed discrete-continuous health records with mixed sum-product networks	9
Correction to: Machine learning-based infection diagnostic and prognostic models in post-acute care settings: a systematic review	9
The journey to building a diverse, equitable, and inclusive American Medical Informatics Association	9
The role of information systems in emergency department decision-making—a literature review	9
Distilling large language models for matching patients to clinical trials	9
quEHRy: a question answering system to query electronic health records	9
Factors impacting electronic patient-generated data use in safety-net systems: a qualitative study	9
“Are we there yet?” Ten persistent hazards and inefficiencies with the use of medication administration technology from the perspective of practicing nurses	9
Correction to: Using natural language processing to characterize and predict homeopathic product-associated adverse events in consumer reviews: comparison to reports to FDA Adverse Event Reporting Sys	9
Global Health Informatics: the state of research and lessons learned	9
Primary care physicians’ electronic health record proficiency and efficiency behaviors and time interacting with electronic health records: a quantile regression analysis	9
Correction	9