Anaerobe

Papers
(The median citation count of Anaerobe is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-01-01 to 2026-01-01.)
ArticleCitations
Comparison of disc diffusion and Sensititre® Broth Microdilution methods for antimicrobial susceptibility testing of Bacteroides fragilis group clinical isolates following the French guidelines142
Presence of Clostridioides difficile in cattle feces, carcasses, and slaughterhouses: Molecular characterization and antibacterial susceptibility of the recovered isolates48
First case of necrotizing fasciitis and bacteremia caused by Bifidobacterium breve47
Culture techniques for ciliate protozoa from the rumen: Recent advances and persistent challenges46
Polymorphonuclear neutrophil depletion in ileal tissues reduces the immunopathology induced by Clostridioides difficile toxins40
Deletion of rgaS reduces virulence in a mouse model of Clostridioides difficile infection39
Approaching toxigenic Clostridia from a One Health perspective34
Clostridioides (Clostridium) difficile in children with diarrhoea in Vietnam30
Fulminant clostridioides (costridium) difficile infection caused by a rare strain of PCR-ribotype 153 in Japan: A case report29
Fusobacterium necrophorum septic arthritis of the hip: A case-report and literature review25
Editorial Board23
Clostridium perfringens from fresh water fish of Kashmir Himalaya and their aquatic environment: Toxinotyping and phylogenetic analysis23
Assessing 30-day recurrence for patients testing indeterminate for Clostridioides difficile based on treatment status23
Clostridium perfringens antigens and challenges for development of vaccines against necrotic enteritis in poultry22
Carbapenem resistance in Bacteroides fragilis: A review of molecular mechanisms21
Clostridioides difficile in Latin America: A comprehensive review of literature (1984–2021)21
Impact of MALDI-TOF MS identification on anaerobic species and genus diversity in routine diagnostics20
Changes in the solid-associated bacterial and fungal communities following ruminal in vitro fermentation of winery by-products: aspects of the bioactive compounds and feed safety20
“Breast abscess in a male patient due to Finegoldia magna and Bifidobacterium scardovii: An unusual entity”19
Study on acute exposure of polyethylene terephthalate microplastics on the performance of anammox granular sludge18
Clostridium perfringens epsilon-toxin requires acid sphingomyelinase for cellular entry18
Anaerobes in specific infectious and noninfectious diseases: new developments17
Prevalence, molecular characterization, and antimicrobial resistance profile of Clostridium perfringens from India: A scoping review17
AI4CDI: Introducing a novel machine learning approach to demonstrate feasibility of timely and early identification of at-risk populations for Clostridioides difficile infections17
Growth of hydrogenotrophic methanogen Methanoculleus bourgensis MAB1 in the presence of dunite17
Contamination of home-grown and retail vegetables with Clostridioides difficile16
Increase of healthcare-onset Clostridioides difficile infection in adult population since SARS-CoV-2 pandemic: A retrospective cohort study in a tertiary care hospital from 2019 to 202215
Clinical characteristics of Actinotignum schaalii bacteremia in a Japanese tertiary hospital15
Urinary tract infections: Should we think about the anaerobic cocci?15
Multi-year comparison of VITEK® MS and 16S rRNA gene sequencing performance for the identification of rarely encountered anaerobes causing invasive human infections in a large Canadian region: can our15
Membrane vesicles of Lactobacillus gasseri ATCC 19992 disrupt biofilms of vaginal pathogens15
Antibiotic susceptibility and biofilm-forming ability of Veillonella strains15
Novel and rare β-lactamase genes of Bacteroides fragilis group species: Detection of the genes and characterization of their genetic backgrounds15
Airborne spores’ dissemination of a swine associated Clostridioides difficile clone15
Clostridioides difficile toxin B suppresses human neutrophil migration14
Editorial Board14
Human neutrophils are resistant to Clostridioides difficile toxin B14
Serine affects engulfment during the sporulation process in Clostridium perfringens strain SM10114
Characterization of G-type Clostridium perfringens bacteriophages and their disinfection effect on chicken meat14
Clostridioides difficile hypervirulent strain ST1 isolated from clinical stool specimens obtained from three Provinces in South Africa14
Archaea from the gut microbiota of humans: Could be linked to chronic diseases?13
Desulfovibrio desulfuricans bacteraemia and associated liver abscess: Case report and literature review13
Evaluation of hydrocortisone as a strain-dependent growth-regulator of Porphyromonas gingivalis13
Brain abscess caused by Porphyromonas gingivalis and Eubacterium nodatum mimicking acute stroke13
Clostridioides (Clostridium) difficile in children and adolescents in the community in Cambodia13
A rubrerythrin locus of Clostridioides difficile encodes enzymes that efficiently detoxify reactive oxygen species13
Development of a clinical prediction model for recurrence and mortality outcomes after Clostridioides difficile infection using a machine learning approach13
Rumen and fecal microbial profiles in cattle fed high lignin diets using metagenome analysis13
Clostridioides difficile: New global perspectives13
Antimicrobial susceptibility of Bacteroides fragilis group organisms in Hong Kong, 2020–202112
Bacteremia due to Parabacteroides distasonis: Experience with 4 cases12
Fecal shedding of Clostridioides difficile in calves in Sao Paulo state, Brazil12
Production of highly soluble and immuno-reactive recombinant flagellin protein of Clostridium chauvoei12
Clinical significance of Bacteroides fragilis as a potential prognostic factor in colorectal cancer11
A culture-based and culture-independent approach to the study of landfill leachate bacterial and archaeal communities11
A narrative review of Clostridioides difficile infection in China11
Clinical and microbiological characteristics of Ruminococcus gnavus bacteremia and intra-abdominal infection11
Evaluation of disk diffusion method for testing the rifampicin, erythromycin, and tetracycline susceptibility of Clostridioides (prev. Clostridium) difficile11
In vitro anti-clostridial action and potential of the spice herbs essential oils to prevent biofilm formation of hypervirulent Clostridioides difficile strains isolated from hospitalized patients with10
Finegoldia magna, a neglected cause of endocarditis – case report10
Reconsidering the in vivo functions of Clostridial Stickland amino acid fermentations10
Detailed analysis of metabolism reveals growth-rate-promoting interactions between Anaerostipes caccae and Bacteroides spp.10
Clinical usefulness of anaerobic blood culture in pediatric patients with bacteremia9
A case of Slackia exigua bacteremia associated with pyometra in a patient with poor dentition9
Molecular epidemiology of endemic Clostridioides difficile infection in Japan9
Laboratory diagnosis of Clostridioides difficile infection: past, present and future9
Current practices to reduce the risk of transmission of Clostridioides difficile in France: results of a national survey9
Genotypic and phenotypic diversity of carbapenem-resistant Bacteroides fragilis strains collected from different clinical origins9
Linkage study of surveillance and hospital admission data to investigate Clostridium difficile infection in hospital patients in Perth, Western Australia9
Ruminococcus gnavus bacteremia: Literature review and a case report associated with acute flare of ulcerative colitis in an immunocompromised patient9
Risk factors for recurrent healthcare-facility associated Clostridioides difficile infection in a Swedish setting9
Clostridioides difficile infection promotes gastrointestinal dysfunction in human and mice post-acute phase of the disease9
Community-associated Clostridioides difficile infection in a general hospital from Argentina9
Impact of COVID19 pandemic on the incidence of health-care associated Clostridioides difficile infection9
Phenotypic and genomic characterization of Clostridioides difficile strains involved in multiple recurrences9
Nonmammalian models to study Clostridioides difficile infection; a systematic review8
Prevalence of Clostridioides difficile in dogs (Canis familiaris) with gastrointestinal disorders in Rio de Janeiro8
Antimicrobial susceptibility patterns of anaerobic bacteria at an Irish University Hospital over a ten-year period (2010–2020)8
Milestones in Clostridium perfringens research since 19958
Cultivation of anaerobic bacteria: Foundations and principles8
Tribute to Dr. Hebe Mabel Bianchini8
Prevalence of cpe-positive Clostridium perfringens in surface-attached soil of commercially available potatoes and its significance as a potential source of food poisoning8
A review of epidemiological models of Clostridioides difficile transmission and control (2009–2021)8
Septic shock caused by Slackia exigua in a patient with diabetes8
Oral teicoplanin administration suppresses recurrence of Clostridioides difficile infection: Proof of concept8
Clostridioides difficile infection and testing rates in South Africa: A multicentre study, 2017–20208
Fusobacterium ulcerans: from gut to commensal and bacterial translocation?8
Bacteremia due to Hungatella effluvii in a patient with end-stage renal failure requiring hemodialysis: a case report and literature review of human infections caused by Hungatella spp.8
Incidence of healthcare-associated Clostridioides difficile infection in a quaternary referral university hospital in Brazil8
Transmission of toxigenic Clostridiodes difficile between a pet dog with diarrhea and a 10-month-old infant8
Clostridioides difficile in Australian dairy farms8
Improvement of chronic GVHD after oral treatment with Clostridium butyricum (Miya BM)8
Obituary of Mike Cox (1945–2024)8
A first case of prosthetic joint infection with Actinomyces radingae8
Bacteremia due to Prevotella oris of probable hepatic origin8
Odoribacter splanchnicus bacteremia: a rare condition associated with intestinal disease7
Antimicrobial susceptibility of anaerobic clinical isolates: A two-year surveillance7
A rapid genome-proteome approach to identify rate-limiting steps in the butyrate production pathway in probiotic Clostridium butyricum, CBM5887
Molecular characterization of Clostridioides difficile by multi-locus sequence typing (MLST): A study from tertiary care center in India7
Editorial Board7
Comparison of microbiological profile of enterotoxigenic Bacteroides fragilis (ETBF) isolates from subjects with colorectal cancer (CRC) or intestinal pre-cancerous lesions versus healthy individuals 7
Is Bacteroides finegoldii a new bacterial pathogen?7
Novel transcriptional regulator OxtR1 regulates potential ferrodoxin in response to oxygen stress in Treponema denticola7
Survival of bovine digital dermatitis treponemes in conditions relevant to the host and farm environment7
First reported case of Robinsoniella peoriensis pyometra and bloodstream infection: A case report and review of the literature7
The impact of 30-day antecedent antibiotic exposure on Clostridioides difficile ribotype patterns and the relationship with clinical outcomes: A single center study7
The first case of septic arthritis of the knee caused by Eggerthia catenaformis7
Low usefulness of reporting tonsillar PCR Ct-values in pharyngeal infections with Fusobacterium necrophorum7
Toxigenic, atypical strains of Clostridioides difficile isolated from soils of Western Australian public parks7
Fusobacteria behaving badly: Masquerading strains of strictly anaerobic Escherichia coli misidentified due to the deletion of the hemB gene7
Misidentification of Phocaeicola (Bacteroides) dorei in two patients with bacteremia7
A comparison of the antimicrobial resistance of fecal Bacteroides isolates and assessment of the composition of the intestinal microbiotas of carbapenem-treated and non-treated persons from Belgium an7
Novel competitive annealing-mediated isothermal amplification (CAMP)-based detection of epsilon toxin gene in Clostridium perfringens7
Clinical and microbiological characteristics of anaerobic bacteremia during 1994–2019: A Danish population-based cohort study7
Bacteroides fragilis spondylitis after suspected oral ulcer: a clinical case and comprehensive literature review7
Biology activity and characterization of the functional L-HN fragment derivative of botulinum neurotoxin serotype E7
Characterizing prophages in the genus Fusobacterium6
Association between Bacteroides fragilis and Fusobacterium nucleatum infection and colorectal cancer in Vietnamese patients6
Predominance of Clostridioides difficile PCR ribotype 181 in northern Greece, 2016–20196
Molecular clock complexities of Clostridioides difficile6
Clostridioides difficile infection in Africa: A narrative review6
First reported case of Lachnoanaerobaculum gingivalis bacteremia in an acute myeloid leukemia patient with oral mucositis during high dose chemotherapy6
Editorial Board6
Upregulation of the cfiA carbapenemase gene in a Bacteroides fragilis strain by the novel integrative and conjugative element Tn75636
Cutibacterium avidum: A virulent pathogen in esthetic surgery infection, a case series6
Clostridioides difficile in food and food products of animal origin in Assam, India6
Oxalobacter formigenes: A new hope as a live biotherapeutic agent in the management of calcium oxalate renal stones6
Lipoproteins from Bilophila wadsworthia cell wall induce innate immune responses through Toll-like receptor 26
Metabolism of azo food dyes by bacterial members of the human gut microbiome6
Culture performance of Fastidious Anaerobe Agar for frequently-encountered anaerobic bacteria, and potential application in EUCAST antimicrobial susceptibility testing6
Polymicrobial anaerobic sepsis due to Bacteroides fragilis, Eggerthella lenta, Ruminoccocus gnavus, and Bilophila wadsworthia in a patient with myeloproliferative neoplasm6
Clinical anaerobic infections in an Indian tertiary care hospital: A two-year retrospective study6
The impact of existing total anti-toxin B IgG immunity in outcomes of recurrent Clostridioides difficile infection5
Brain abscess caused by Parvimonas micra: A rare case report and literature review5
Regulatory networks: Linking toxin production and sporulation in Clostridioides difficile5
Risk factors of first recurrence of Clostridioides difficile infection5
The first case of Veillonella atypica bacteremia in a patient with renal pelvic tumor5
Why foodborne botulism cannot be caused by honey5
CDBN-YGXZ shows highly antibacterial activity against Clostridioides difficile as a potential candidate drug5
Anaerobiospirillum succiniciproducens prosthetic joint infection5
Lactobacillus acidophilus regulates abnormal serotonin availability in experimental ulcerative colitis5
Oxygen exposure decreases the yield of high-molecular-weight DNA from some anaerobic bacteria and bacterial communities during DNA extraction5
Appropriate cleaning reduces potential risk of spore transmission from patients with Clostridioides difficile infection treated in outpatient infusion centers5
Editorial Board5
Characterization of mobile genetic elements in multidrug-resistant Bacteroides fragilis isolates from different hospitals in the Netherlands5
Gas gangrene caused by spontaneous Clostridium septicum infection: A case study5
Chitin promotes equol production via -acetylglucosamine in human fecal cultures5
Characterization of the oxidative stress response regulatory network in Bacteroides fragilis: An interaction between BmoR and OxyR regulons promotes abscess formation in a model of intra-abdominal inf5
Microscopy methods for Clostridioides difficile5
Editorial Board5
The comparison of changes in fecal and mucosal microbiome in metabolic endotoxemia induced by a high-fat diet5
Editorial Board4
High prevalence of cfiA positive Bacteroides fragilis isolates collected at a teaching hospital in Hohhot, China4
Identifying PCR-ribotype 017-lineage isolates of Clostridioides difficile using MALDI-TOF MS4
The growth-stimulating factor of Treponema phagedenis from bovine digital dermatitis lesions4
Development of two recombinant vaccines against Clostridioides difficile infection and immunogenicity in pregnant sows and neonatal piglets4
Antimicrobial susceptibility testing of Bacteroides species by disk diffusion: The NordicAST Bacteroides study4
Editorial Board4
Editorial Board4
A subanalysis of Clostridium perfringens bloodstream infections from a 5-year retrospective nationwide survey (ITANAEROBY)4
Identification and antibiotic susceptibility testing of Bacteroides fragilis directly from positive blood culture broths4
Serum IgM antibody response to Clostridioides difficile polysaccharide PS-II vaccination in pony foals4
Implementation of a Clostridioides difficile sentinel surveillance system in Germany: First insights for 2019–20214
Two cases of Clostridium ramosum bacteremia with intestinal perforation: The antimicrobial susceptibility of clinical strains4
Antimicrobial resistance profiles of Clostridium species isolated from post-traumatic infections in a Costa Rican hospital4
Clostridioides difficile infection (CDI) during the COVID-19 pandemic4
Chalcones with potential antibacterial and antibiofilm activities against periodontopathogenic bacteria4
Two cases of bacteremic pneumonia caused by Bifidobacterium species4
Clostridioides difficile in raw mechanically separated poultry meat and pasteurized product made from contaminated meat4
Strain-specific genetic signatures of enterotoxigenic Bacteroides fragilis (ETBF) reveal bft-2 as a candidate biomarker for colorectal cancer4
Effects of common cosmetic ingredients on growth of dominant human skin inhabitant Cutibacterium acnes4
Butyricimonas paravirosa bacteremia associated with acute terminal ileitis: Case report and literature review4
Optimization of CO fermentation by Clostridium carboxidivorans in batch reactors: Effects of the medium composition4
Antimicrobial effects of cannabidiol on select agriculturally important Clostridia4
Bioaugmentation with methanogens cultured in a micro-aerobic microbial community for overloaded anaerobic digestion recovery4
A metabolite dehydrogenase pathway represses sporulation of Clostridioides difficile4
Identification of root canal microbiota profiles of periapical tissue diseases using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry4
Fecal microbiota transplantation as therapy for recurrent Clostridioides difficile infection is associated with amelioration of delirium and accompanied by changes in fecal microbiota and the metabolo4
Fecal microbiota transplantation stimulates type 2 and tolerogenic immune responses in a mouse model4
Identification of cfxA gene variants and susceptibility patterns in β-lactamase-producing Prevotella strains3
Community-onset Clostridioides difficile infection in south Serbia3
Isolation, toxinotyping and antimicrobial susceptibility testing of Clostridium perfringens isolated from Pakistan poultry3
IL-13 protects from Clostridioides difficile colitis3
In vitro antimicrobial efficacy of Cannabis sativa L. (hemp) crude oil extract on Fusobacterium necrophorum of bovine origin3
Intra-spinal abscess due to Bacteroides fragilis and Klebsiella pneumoniae co-infection in a child with spinal dysraphism3
Editorial Board3
Rapid release of sepsis markers heparin-binding protein and calprotectin triggered by anaerobic cocci poses an underestimated threat3
Enhancing biogas generation from lignocellulosic biomass through biological pretreatment: Exploring the role of ruminant microbes and anaerobic fungi3
Bacteroides fragilis vertebral osteomyelitis: A rare clinical entity3
Editorial Board3
Walk before you run: Feasibility challenges and lessons learned from the PROCLAIM study, a multicenter randomized controlled trial of misoprostol for prevention of recurrent Clostridioides difficile d3
Diagnosis, treatment and prognosis of otomastoiditis induced by Fusobacterium necrophorum: A retrospective multicentre cohort study3
Efficacy of bezlotoxumab to prevent recurrent Clostridioides difficile infection (CDI) in patients with multiple prior recurrent CDI3
Differences between bloodstream infections involving Gram-positive and Gram-negative anaerobes3
The outer membrane protein of Fusobacterium necrophorum, 43K OMP, stimulates inflammatory cytokine production through nuclear factor kappa B activation3
Prevalence and molecular types of Clostridioides (Clostridium) difficile on Australian retail vegetables and household surfaces3
Metabolism of Lactobacillus and Gardnerella vaginalis in vaginal defined media3
Pauci-symptomatic foodborne botulism due to Clostridium botulinum type B with predominant ophthalmologic presentation possibly after consumption of honey3
Pleural empyema due to polymicrobial Clostridioides difficile, Clostridium tertium and Robinsoniella peoriensis following C. difficile peritonitis3
Characterization of the components of the thioredoxin system in Bacteroides fragilis and evaluation of its activity during oxidative stress3
Bacteroides and related species: The keystone taxa of the human gut microbiota3
Coculture systems to study interactions between anaerobic bacteria and intestinal epithelium3
Bacteroides vicugnae sp. nov. isolated from the fecal material of an alpaca3
Clostridium paraputrificum bacteremia in a 64-year-old woman with colon carcinoma3
Impact of the COVID-19 pandemic on the incidence of healthcare facility-onset Clostridioides difficile infection in hospitalized patients with sepsis: Interrupted time series analysis using Japanese D3
The genus Fervidobacterium, its thermoenzymes and biotechnological potential: an integrative review3
Zebrafish as an in vivo model to study the pathogenicity of Clostridioides difficile clinical strains3
Vegetative forms of Clostridium chauvoei trigger apoptotic and inflammatory responses on macrophages3
Type IV pili facilitated natural competence in Fusobacterium nucleatum3
Initial expression levels of nimA are decisive for protection against metronidazole in Bacteroides fragilis3
Clostridioides difficile infection in patients with and without COVID-19 during the pandemic: A retrospective cohort study from a tertiary referral hospital3
First large-scale study of antimicrobial susceptibility data, and genetic resistance determinants, in Fusobacterium necrophorum highlighting the importance of continuing focused susceptibility trend s3
Comment on “Antimicrobial susceptibility of Bacteroides fragilis group organisms in Hong Kong, 2020–2021”3
Microbiome and metabolome changes after fecal microbiota, live-jslm, administration are associated with health-related quality of life improvements3
Clostridioides difficile is a bacterial priority pathogen3
Colitis caused by Clostridioides difficile infection in a domestic dog: A case report3
Low Clostridioides difficile positivity rate in wild animal shelter in Slovenia3
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