Anaerobe

Papers
(The median citation count of Anaerobe is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-08-01 to 2026-08-01.)
ArticleCitations
Polymorphonuclear neutrophil depletion in ileal tissues reduces the immunopathology induced by Clostridioides difficile toxins225
Culture techniques for ciliate protozoa from the rumen: Recent advances and persistent challenges58
Comparison of disc diffusion and Sensititre® Broth Microdilution methods for antimicrobial susceptibility testing of Bacteroides fragilis group clinical isolates following the French guidelines57
Botulinum neurotoxins: A distinct subclass of SNARE-Cleaving endopeptidases56
First case of necrotizing fasciitis and bacteremia caused by Bifidobacterium breve44
Colonic mucus attenuates Bacteroides fragilis virulence in vitro43
Deletion of rgaS reduces virulence in a mouse model of Clostridioides difficile infection42
Fulminant clostridioides (costridium) difficile infection caused by a rare strain of PCR-ribotype 153 in Japan: A case report24
Assessing 30-day recurrence for patients testing indeterminate for Clostridioides difficile based on treatment status23
Editorial Board23
Clostridium perfringens from fresh water fish of Kashmir Himalaya and their aquatic environment: Toxinotyping and phylogenetic analysis23
Clostridium perfringens antigens and challenges for development of vaccines against necrotic enteritis in poultry21
Carbapenem resistance in Bacteroides fragilis: A review of molecular mechanisms21
Approaching toxigenic Clostridia from a One Health perspective20
The Impact of Fecal Microbiota Transplantation on Host Immunity and Epithelial Restoration Following Clostridioides difficile Infection20
Study on acute exposure of polyethylene terephthalate microplastics on the performance of anammox granular sludge19
Fusobacterium necrophorum septic arthritis of the hip: A case-report and literature review19
AI4CDI: Introducing a novel machine learning approach to demonstrate feasibility of timely and early identification of at-risk populations for Clostridioides difficile infections18
Urinary tract infections: Should we think about the anaerobic cocci?18
Clinical characteristics of Actinotignum schaalii bacteremia in a Japanese tertiary hospital17
Clostridium perfringens epsilon-toxin requires acid sphingomyelinase for cellular entry17
Anaerobes in specific infectious and noninfectious diseases: new developments17
Changes in the solid-associated bacterial and fungal communities following ruminal in vitro fermentation of winery by-products: aspects of the bioactive compounds and feed safety16
Growth of hydrogenotrophic methanogen Methanoculleus bourgensis MAB1 in the presence of dunite16
Systematic review: Accuracy of diagnostic methods for Clostridioides difficile infection16
Effect of replacing two non-lytic anaerobic blood culture flasks with one lytic flask on anaerobic bacterial recovery during a concurrent change in blood culture system15
Prevalence, molecular characterization, and antimicrobial resistance profile of Clostridium perfringens from India: A scoping review15
Increase of healthcare-onset Clostridioides difficile infection in adult population since SARS-CoV-2 pandemic: A retrospective cohort study in a tertiary care hospital from 2019 to 202214
Antibiotic susceptibility and biofilm-forming ability of Veillonella strains14
Airborne spores’ dissemination of a swine associated Clostridioides difficile clone14
Characterization of G-type Clostridium perfringens bacteriophages and their disinfection effect on chicken meat14
Clostridioides difficile toxin B suppresses human neutrophil migration14
Multi-year comparison of VITEK® MS and 16S rRNA gene sequencing performance for the identification of rarely encountered anaerobes causing invasive human infections in a large Canadian region: can our14
Membrane vesicles of Lactobacillus gasseri ATCC 19992 disrupt biofilms of vaginal pathogens14
Editorial Board13
Novel and rare β-lactamase genes of Bacteroides fragilis group species: Detection of the genes and characterization of their genetic backgrounds13
Clostridioides (Clostridium) difficile in children and adolescents in the community in Cambodia13
Clostridioides difficile hypervirulent strain ST1 isolated from clinical stool specimens obtained from three Provinces in South Africa12
Desulfovibrio desulfuricans bacteraemia and associated liver abscess: Case report and literature review12
Serine affects engulfment during the sporulation process in Clostridium perfringens strain SM10112
A rubrerythrin locus of Clostridioides difficile encodes enzymes that efficiently detoxify reactive oxygen species12
Evaluation of disk diffusion method for testing the rifampicin, erythromycin, and tetracycline susceptibility of Clostridioides (prev. Clostridium) difficile11
Finegoldia magna, a neglected cause of endocarditis – case report11
A culture-based and culture-independent approach to the study of landfill leachate bacterial and archaeal communities11
Evaluation of hydrocortisone as a strain-dependent growth-regulator of Porphyromonas gingivalis11
Antimicrobial susceptibility of Bacteroides fragilis group organisms in Hong Kong, 2020–202111
Brain abscess caused by Porphyromonas gingivalis and Eubacterium nodatum mimicking acute stroke11
Archaea from the gut microbiota of humans: Could be linked to chronic diseases?11
Bacteremia due to Parabacteroides distasonis: Experience with 4 cases11
Production of highly soluble and immuno-reactive recombinant flagellin protein of Clostridium chauvoei11
Clinical significance of Bacteroides fragilis as a potential prognostic factor in colorectal cancer10
Development of a clinical prediction model for recurrence and mortality outcomes after Clostridioides difficile infection using a machine learning approach10
Reconsidering the in vivo functions of Clostridial Stickland amino acid fermentations10
MALDI-TOF mass spectrometry coupled with machine learning: an accurate tool to detect toxigenic Clostridioides difficile strains10
Quality of Life among Patients with Community-Onset Clostridioides difficile Infection Treated in the Outpatient Setting10
Clinical and microbiological characteristics of Ruminococcus gnavus bacteremia and intra-abdominal infection10
Eosinopenia is associated with worse outcomes in hospitalized patients with Clostridioides difficile infection in South Korea10
In vitro anti-clostridial action and potential of the spice herbs essential oils to prevent biofilm formation of hypervirulent Clostridioides difficile strains isolated from hospitalized patients with10
Clinical usefulness of anaerobic blood culture in pediatric patients with bacteremia10
Fecal shedding of Clostridioides difficile in calves in Sao Paulo state, Brazil10
Impact of saliva on the efficacy of antiseptics against selected periopathogens10
Risk factors for recurrent healthcare-facility associated Clostridioides difficile infection in a Swedish setting10
Current practices to reduce the risk of transmission of Clostridioides difficile in France: results of a national survey10
Genotypic and phenotypic diversity of carbapenem-resistant Bacteroides fragilis strains collected from different clinical origins9
Detailed analysis of metabolism reveals growth-rate-promoting interactions between Anaerostipes caccae and Bacteroides spp.9
Bacteremia due to Prevotella oris of probable hepatic origin9
Community-associated Clostridioides difficile infection in a general hospital from Argentina9
Clostridioides difficile infection promotes gastrointestinal dysfunction in human and mice post-acute phase of the disease9
Prevalence of cpe-positive Clostridium perfringens in surface-attached soil of commercially available potatoes and its significance as a potential source of food poisoning9
Ruminococcus gnavus bacteremia: Literature review and a case report associated with acute flare of ulcerative colitis in an immunocompromised patient9
Nonmammalian models to study Clostridioides difficile infection; a systematic review9
Prevalence of Clostridioides difficile in dogs (Canis familiaris) with gastrointestinal disorders in Rio de Janeiro9
Phenotypic and genomic characterization of Clostridioides difficile strains involved in multiple recurrences8
External quality assessment in antimicrobial susceptibility testing (EUCAST disc diffusion methodology) of five anaerobic strains – performance of 35 laboratories in Germany and Austria, 20248
Genome-based reclassification of the genus Thermoanaerobacter: taxonomic emendations and new combinations8
Improvement of chronic GVHD after oral treatment with Clostridium butyricum (Miya BM)8
Laboratory diagnosis of Clostridioides difficile infection: past, present and future8
Clostridioides difficile in Australian dairy farms8
Oral teicoplanin administration suppresses recurrence of Clostridioides difficile infection: Proof of concept8
Fusobacterium ulcerans: from gut to commensal and bacterial translocation?8
Milestones in Clostridium perfringens research since 19958
Incidence of healthcare-associated Clostridioides difficile infection in a quaternary referral university hospital in Brazil8
Obituary of Mike Cox (1945–2024)7
Tribute to Dr. Hebe Mabel Bianchini7
Bacteremia due to Hungatella effluvii in a patient with end-stage renal failure requiring hemodialysis: a case report and literature review of human infections caused by Hungatella spp.7
A rapid genome-proteome approach to identify rate-limiting steps in the butyrate production pathway in probiotic Clostridium butyricum, CBM5887
The clinical significance of real-time PCR cycle threshold (Ct) values in Clostridioides difficile infection7
Cultivation of anaerobic bacteria: Foundations and principles7
Survival of bovine digital dermatitis treponemes in conditions relevant to the host and farm environment7
Bacteroides thetaiotaomicron bacteremia: an analysis of 23 cases from a single Japanese tertiary hospital7
Clostridioides difficile infection and testing rates in South Africa: A multicentre study, 2017–20207
Beta-lactamases in anaerobic, intestinal bacteria: a narrative review7
Low usefulness of reporting tonsillar PCR Ct-values in pharyngeal infections with Fusobacterium necrophorum6
A first case of prosthetic joint infection with Actinomyces radingae6
The impact of 30-day antecedent antibiotic exposure on Clostridioides difficile ribotype patterns and the relationship with clinical outcomes: A single center study6
Antimicrobial susceptibility of anaerobic clinical isolates: A two-year surveillance6
Biology activity and characterization of the functional L-HN fragment derivative of botulinum neurotoxin serotype E6
Is Bacteroides finegoldii a new bacterial pathogen?6
Polymicrobial anaerobic sepsis due to Bacteroides fragilis, Eggerthella lenta, Ruminoccocus gnavus, and Bilophila wadsworthia in a patient with myeloproliferative neoplasm6
Odoribacter splanchnicus bacteremia: a rare condition associated with intestinal disease6
Novel transcriptional regulator OxtR1 regulates potential ferrodoxin in response to oxygen stress in Treponema denticola6
Metabolic Reprogramming and Taxonomic Drivers in Bacterial Vaginosis: A Large-Scale Metagenomic Meta-Analysis6
Toxigenic, atypical strains of Clostridioides difficile isolated from soils of Western Australian public parks6
Clostridial hemolysin β-pore-forming toxins: from genomic insights to receptor specificity and clinical implications6
Novel competitive annealing-mediated isothermal amplification (CAMP)-based detection of epsilon toxin gene in Clostridium perfringens6
Expression of concern: “Pyrosequencing study of fecal microflora of autistic and control children”6
Fusobacteria behaving badly: Masquerading strains of strictly anaerobic Escherichia coli misidentified due to the deletion of the hemB gene6
Bacteroides fragilis spondylitis after suspected oral ulcer: a clinical case and comprehensive literature review6
Comparison of microbiological profile of enterotoxigenic Bacteroides fragilis (ETBF) isolates from subjects with colorectal cancer (CRC) or intestinal pre-cancerous lesions versus healthy individuals 6
Identification of genes involved in extracellular DNA release during biofilm formation in Clostridium perfringens5
Association between Bacteroides fragilis and Fusobacterium nucleatum infection and colorectal cancer in Vietnamese patients5
Upregulation of the cfiA carbapenemase gene in a Bacteroides fragilis strain by the novel integrative and conjugative element Tn75635
Anaerobiospirillum succiniciproducens prosthetic joint infection5
Culture performance of Fastidious Anaerobe Agar for frequently-encountered anaerobic bacteria, and potential application in EUCAST antimicrobial susceptibility testing5
Cutibacterium avidum: A virulent pathogen in esthetic surgery infection, a case series5
Molecular clock complexities of Clostridioides difficile5
Characterizing prophages in the genus Fusobacterium5
Lactobacillus acidophilus regulates abnormal serotonin availability in experimental ulcerative colitis5
CDBN-YGXZ shows highly antibacterial activity against Clostridioides difficile as a potential candidate drug5
Chitin promotes equol production via -acetylglucosamine in human fecal cultures5
Appropriate cleaning reduces potential risk of spore transmission from patients with Clostridioides difficile infection treated in outpatient infusion centers5
Metabolism of azo food dyes by bacterial members of the human gut microbiome5
Editorial Board5
Clinical and microbiological characteristics of anaerobic bacteremia during 1994–2019: A Danish population-based cohort study5
Brain abscess caused by Parvimonas micra: A rare case report and literature review5
Predominance of Clostridioides difficile PCR ribotype 181 in northern Greece, 2016–20195
Microbial adaptation and host signaling: Bacteroides–bile acid interactions in gut health5
First reported case of Lachnoanaerobaculum gingivalis bacteremia in an acute myeloid leukemia patient with oral mucositis during high dose chemotherapy5
Gas gangrene caused by spontaneous Clostridium septicum infection: A case study5
Lipoproteins from Bilophila wadsworthia cell wall induce innate immune responses through Toll-like receptor 25
Clostridioides difficile in food and food products of animal origin in Assam, India5
The comparison of changes in fecal and mucosal microbiome in metabolic endotoxemia induced by a high-fat diet4
Editorial Board4
Microscopy methods for Clostridioides difficile4
Oxygen exposure decreases the yield of high-molecular-weight DNA from some anaerobic bacteria and bacterial communities during DNA extraction4
Epidemiology of community-treated and hospitalized Clostridioides difficile infection and estimation of attributable hospitalization costs in France, 2015–20194
Implementation of a Clostridioides difficile sentinel surveillance system in Germany: First insights for 2019–20214
Editorial Board4
Identifying PCR-ribotype 017-lineage isolates of Clostridioides difficile using MALDI-TOF MS4
Regulatory networks: Linking toxin production and sporulation in Clostridioides difficile4
Characterization of the oxidative stress response regulatory network in Bacteroides fragilis: An interaction between BmoR and OxyR regulons promotes abscess formation in a model of intra-abdominal inf4
Why foodborne botulism cannot be caused by honey4
Two cases of Clostridium ramosum bacteremia with intestinal perforation: The antimicrobial susceptibility of clinical strains4
Antimicrobial resistance profiles of Clostridium species isolated from post-traumatic infections in a Costa Rican hospital4
Chalcones with potential antibacterial and antibiofilm activities against periodontopathogenic bacteria4
Antimicrobial effects of cannabidiol on select agriculturally important Clostridia4
Identification of root canal microbiota profiles of periapical tissue diseases using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry4
Antimicrobial susceptibility testing of Bacteroides species by disk diffusion: The NordicAST Bacteroides study4
Bioaugmentation with methanogens cultured in a micro-aerobic microbial community for overloaded anaerobic digestion recovery4
Editorial Board4
Characterization of mobile genetic elements in multidrug-resistant Bacteroides fragilis isolates from different hospitals in the Netherlands4
The impact of existing total anti-toxin B IgG immunity in outcomes of recurrent Clostridioides difficile infection4
Optimization of CO fermentation by Clostridium carboxidivorans in batch reactors: Effects of the medium composition4
Development of two recombinant vaccines against Clostridioides difficile infection and immunogenicity in pregnant sows and neonatal piglets4
The growth-stimulating factor of Treponema phagedenis from bovine digital dermatitis lesions4
Walk before you run: Feasibility challenges and lessons learned from the PROCLAIM study, a multicenter randomized controlled trial of misoprostol for prevention of recurrent Clostridioides difficile d3
Low Clostridioides difficile positivity rate in wild animal shelter in Slovenia3
Serum IgM antibody response to Clostridioides difficile polysaccharide PS-II vaccination in pony foals3
Editorial Board3
Coculture systems to study interactions between anaerobic bacteria and intestinal epithelium3
Editorial Board3
First large-scale study of antimicrobial susceptibility data, and genetic resistance determinants, in Fusobacterium necrophorum highlighting the importance of continuing focused susceptibility trend s3
The changes of fecal calprotectin and lactoferrin during Clostridioides difficile infection3
Differences between bloodstream infections involving Gram-positive and Gram-negative anaerobes3
A subanalysis of Clostridium perfringens bloodstream infections from a 5-year retrospective nationwide survey (ITANAEROBY)3
Clostridioides difficile is a bacterial priority pathogen3
Clostridioides difficile in raw mechanically separated poultry meat and pasteurized product made from contaminated meat3
Pleural empyema due to polymicrobial Clostridioides difficile, Clostridium tertium and Robinsoniella peoriensis following C. difficile peritonitis3
A metabolite dehydrogenase pathway represses sporulation of Clostridioides difficile3
Efficacy of bezlotoxumab to prevent recurrent Clostridioides difficile infection (CDI) in patients with multiple prior recurrent CDI3
Enhancing biogas generation from lignocellulosic biomass through biological pretreatment: Exploring the role of ruminant microbes and anaerobic fungi3
Editorial Board3
The genus Fervidobacterium, its thermoenzymes and biotechnological potential: an integrative review3
Diagnosis, treatment and prognosis of otomastoiditis induced by Fusobacterium necrophorum: A retrospective multicentre cohort study3
Microbiome and metabolome changes after fecal microbiota, live-jslm, administration are associated with health-related quality of life improvements3
Butyricimonas paravirosa bacteremia associated with acute terminal ileitis: Case report and literature review3
Identification of cfxA gene variants and susceptibility patterns in β-lactamase-producing Prevotella strains3
Clostridioides difficile in chicken fresh meat at retail in France3
Impact of the COVID-19 pandemic on the incidence of healthcare facility-onset Clostridioides difficile infection in hospitalized patients with sepsis: Interrupted time series analysis using Japanese D3
Strain-specific genetic signatures of enterotoxigenic Bacteroides fragilis (ETBF) reveal bft-2 as a candidate biomarker for colorectal cancer3
Fecal microbiota transplantation stimulates type 2 and tolerogenic immune responses in a mouse model3
Bacteroides vicugnae sp. nov. isolated from the fecal material of an alpaca3
Clostridium paraputrificum bacteremia in a 64-year-old woman with colon carcinoma3
High prevalence of cfiA positive Bacteroides fragilis isolates collected at a teaching hospital in Hohhot, China3
Community-onset Clostridioides difficile infection in south Serbia3
Effects of common cosmetic ingredients on growth of dominant human skin inhabitant Cutibacterium acnes3
Comment on “Antimicrobial susceptibility of Bacteroides fragilis group organisms in Hong Kong, 2020–2021”3
Identification and antibiotic susceptibility testing of Bacteroides fragilis directly from positive blood culture broths3
Exploring the role of gut methanogenic archaea in childhood stunting in Aceh Province, Indonesia3
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