Anaerobe

Papers
(The median citation count of Anaerobe is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-09-01 to 2024-09-01.)
ArticleCitations
Association between the gut and oral microbiome with obesity58
Clostridioides difficile infection (CDI) during the COVID-19 pandemic37
Porphyromonas: A neglected potential key genus in human microbiomes31
Clostridium innocuum: Microbiological and clinical characteristics of a potential emerging pathogen29
Inhibitory effect of LL-37 and human lactoferricin on growth and biofilm formation of anaerobes associated with oral diseases25
Development and application of aerobic, chemically defined media for Dysgonomonas25
Toxinotyping and molecular characterization of antimicrobial resistance in Clostridium perfringens isolated from different sources of livestock and poultry24
Did Clostridioides difficile testing and infection rates change during the COVID-19 pandemic?23
The burden of Clostridioides difficile infection in COVID-19 patients: A systematic review and meta-analysis23
Archaea from the gut microbiota of humans: Could be linked to chronic diseases?22
Rumen bacterial diversity in relation to nitrogen retention in beef cattle22
Anaerobic bloodstream infections in Italy (ITANAEROBY): A 5-year retrospective nationwide survey21
Bioactive coatings for dental implants: A review of alternative strategies to prevent peri-implantitis induced by anaerobic bacteria21
Oral infection with a periodontal pathogen alters oral and gut microbiomes21
Reconsidering the in vivo functions of Clostridial Stickland amino acid fermentations20
Anaerobic bacterial communities associated with oral carcinoma: Intratumoral, surface-biofilm and salivary microbiota19
Genomic basis of antimicrobial resistance in non-toxigenic Clostridium difficile in Southeast Asia19
Porphyromonas spp. have an extensive host range in ill and healthy individuals and an unexpected environmental distribution: A systematic review and meta-analysis19
Antimicrobial susceptibility profiles of invasive isolates of anaerobic bacteria from a large Canadian reference laboratory: 2012–201919
Bacteremia caused by Veillonella dispar in an oncological patient19
Carbapenem resistance in Bacteroides fragilis: A review of molecular mechanisms19
Unravelling the eco-specificity and pathophysiological properties of Cutibacterium species in the light of recent taxonomic changes18
Non-oral Prevotella stepping into the spotlight18
The alterations of microbiota and pathological conditions in the gut of patients with colorectal cancer undergoing chemotherapy18
Dogs are carriers of Clostridioides difficile lineages associated with human community-acquired infections17
Anaerobic biodegradation of fluoxetine using a high-performance bacterial community17
A cortex-specific penicillin-binding protein contributes to heat resistance in Clostridioides difficile spores16
Comparative genomic analysis and proposal of Clostridium yunnanense sp. nov., Clostridium rhizosphaerae sp. nov., and Clostridium paridis sp. nov., three novel Clostridium sensu stricto endophytes wit15
Clostridioides difficile in Latin America: A comprehensive review of literature (1984–2021)15
Phylum Synergistetes in the oral cavity: A possible contributor to periodontal disease15
A novel in situ methodology for visual detection of Clostridium perfringens in pork harnessing saltatory rolling circle amplification14
Septic arthritis caused by Desulfovibrio desulfuricans: A case report and review of the literature14
UK Bacteroides species surveillance survey: Change in antimicrobial resistance over 16 years (2000–2016)14
FN3 protein fragment containing two type III fibronectin domains from B. longum GT15 binds to human tumor necrosis factor alpha in vitro14
A culture-based and culture-independent approach to the study of landfill leachate bacterial and archaeal communities14
Physicochemical stressors and mixed alkaloid supplementation modulate ruminal microbiota and fermentation in vitro14
Clostridioides difficile epidemiology in the Middle and the Far East13
Urinary tract infections: Should we think about the anaerobic cocci?13
An outbreak of Clostridioides difficile infections due to a 027-like PCR ribotype 181 in a rehabilitation centre: Epidemiological and microbiological characteristics13
Correlation between antibiotic resistance and clinical outcome of anaerobic infections; mini-review13
Chalcones with potential antibacterial and antibiofilm activities against periodontopathogenic bacteria13
A narrative review of Clostridioides difficile infection in China12
Rumen and fecal microbial profiles in cattle fed high lignin diets using metagenome analysis12
The role of anaerobic bacteria in the development and prevention of colorectal cancer: A review study12
Role of a probiotic strain in the modulation of gut microbiota and cytokines in inflammatory bowel disease12
First description of abdominal infection due to Alistipes onderdonkii12
What's a SNP between friends: The lineage of Clostridioides difficile R20291 can effect research outcomes12
Human gut-derived commensal suppresses generation of T-cell response to gliadin in humanized mice by modulating gut microbiota12
Impact of smokeless tobacco-associated bacteriome in oral carcinogenesis12
Fecal microbiota transplantation as therapy for recurrent Clostridioides difficile infection is associated with amelioration of delirium and accompanied by changes in fecal microbiota and the metabolo11
Clostridioides difficile on dairy farms and potential risk to dairy farm workers11
Antimicrobial resistance progression in the United Kingdom: A temporal comparison of Clostridioides difficile antimicrobial susceptibilities11
Clostridioides difficile epidemiology in India11
Type 2 cytokines IL-4 and IL-5 reduce severe outcomes from Clostridiodes difficile infection11
Multiple hepatic and brain abscesses caused by Parvimonas micra: A case report and literature review11
Clostridium perfringens α-toxin specifically induces endothelial cell death by promoting ceramide-mediated apoptosis11
Peptostreptococcus anaerobius: Pathogenicity, identification, and antimicrobial susceptibility. Review of monobacterial infections and addition of a case of urinary tract infection directly identified10
Impact of MALDI-TOF MS identification on anaerobic species and genus diversity in routine diagnostics10
Fusobacterium necrophorum oral infections – A need for guidance10
Oxalobacter formigenes: A new hope as a live biotherapeutic agent in the management of calcium oxalate renal stones10
Targeting antibiotic tolerance in anaerobic biofilms associated with oral diseases: Human antimicrobial peptides LL-37 and lactoferricin enhance the antibiotic efficacy of amoxicillin, clindamycin and10
Inhibitory effect of d-arabinose on oral bacteria biofilm formation on titanium discs10
Clostridioides difficile carriage in animals and the associated changes in the host fecal microbiota10
Bacteroides and related species: The keystone taxa of the human gut microbiota10
Clostridioides difficile infection in Africa: A narrative review10
Unravelling of nitric oxide signalling: A potential biomarker with multifaceted complex mechanism associated with canine inflammatory bowel disease (IBD)10
Isolation, toxinotyping and antimicrobial susceptibility testing of Clostridium perfringens isolated from Pakistan poultry10
Identification of Clostridium innocuum hypothetical protein that is cross-reactive with C. difficile anti-toxin antibodies10
Molecular epidemiology of endemic Clostridioides difficile infection in Japan10
Label-free quantitative proteomic analysis of the oral bacteria Fusobacterium nucleatum and Porphyromonas gingivalis to identify protein features relevant in biofilm formation9
In vitro fermentation and isolation of heparin-degrading bacteria from human gut microbiota9
Phenotypic and genotypic antimicrobial resistance profiles of fecal lactobacilli from domesticated pigeons in Poland9
Prevalence, toxin-typing and antimicrobial susceptibility of Clostridium perfringens in sheep with different feeding modes from Gansu and Qinghai provinces, China9
Systems biology evaluation of refractory Clostridioides difficile infection including multiple failures of fecal microbiota transplantation9
Etiology and antimicrobial susceptibility profiles of anaerobic bacteria isolated from clinical samples in a university hospital in Madrid, Spain9
Methotrexate promotes recovery of arthritis-induced alveolar bone loss and modifies the composition of the oral-gut microbiota9
Detection of beta-lactamase production in clinical Prevotella species by MALDI-TOF MS method9
Leukotoxin production by Fusobacterium necrophorum strains in relation to severity of liver abscesses in cattle9
Comparative evaluation of agar dilution and broth microdilution by commercial and in-house plates for Bacteroides fragilis group: An economical and expeditious approach for resource-limited settings9
Misidentification of Phocaeicola (Bacteroides) dorei in two patients with bacteremia9
Prevalence, molecular characterization, and antimicrobial resistance profile of Clostridium perfringens from India: A scoping review9
Clostridioides difficile spores stimulate inflammatory cytokine responses and induce cytotoxicity in macrophages9
Antibiotic susceptibility and biofilm-forming ability of Veillonella strains8
Antimicrobial susceptibility pattern of oral gram negative anaerobes from Indian subjects8
Bioaugmentation with methanogens cultured in a micro-aerobic microbial community for overloaded anaerobic digestion recovery8
Cutibacterium acnes biofilm forming clinical isolates modify the formation and structure of Staphylococcus aureus biofilms, increasing their susceptibility to antibiotics8
Prevalence and characterization of Clostridium perfringens isolated from different chicken farms in China8
Flexible feeding in anaerobic digestion – Impact on process stability, performance and microbial community structures8
Implementation of a Clostridioides difficile sentinel surveillance system in Germany: First insights for 2019–20218
Evaluation of the expression and immunogenicity of four versions of recombinant Clostridium perfringens beta toxin designed by bioinformatics tools8
Antimicrobial susceptibility testing of anaerobic bacteria: In routine and research8
Predominance of Clostridioides difficile PCR ribotype 181 in northern Greece, 2016–20198
Three cases of Sutterella wadsworthensis bacteremia secondary to abdominal infections8
Akkermansia muciniphila and host interaction within the intestinal tract8
Transmission of toxigenic Clostridiodes difficile between a pet dog with diarrhea and a 10-month-old infant8
Diversity of genomic clusters and CfiA/cfiA alleles in Bacteroides fragilis isolates from human and animals8
Detection of co-infection of Gardnerella vaginalis and Atopobium vaginae using qualitative PCR: A better predictor of bacterial vaginosis8
First description of Lachnoanaerobaculum orale as a possible cause of human bacteremia8
Clinical anaerobic infections in an Indian tertiary care hospital: A two-year retrospective study7
Production and purification of Clostridium perfringens type D epsilon toxin and IgY antitoxin7
A novel case of bilateral tubo-ovarian abscesses attributed to Ruminococcus gnavus without gastrointestinal involvement7
Visualization of fidaxomicin association with the exosporium layer of Clostridioides difficile spores7
The potential role of molecular mimicry by the anaerobic microbiota in the aetiology of autoimmune disease7
Impact of COVID-19 pandemic on prevalence of Clostridioides difficile infection in a UK tertiary centre7
Add-on interventions for the prevention of recurrent Clostridioides Difficile infection: A systematic review and network meta-analysis7
Spore-forming properties and enhanced oxygen tolerance of butyrate-producing Anaerostipes spp.7
The role of short-chain fatty acids in Clostridioides difficile infection: A review7
Highbush blueberry proanthocyanidins alleviate Porphyromonas gingivalis-induced deleterious effects on oral mucosal cells7
Hospitalized patients with diarrhea: Rate of Clostridioides difficile infection underdiagnosis and drivers of clinical suspicion7
A metagenomic assessment of microbial communities in anaerobic bioreactors and sediments: Taxonomic and functional relationships7
Molecular characterization of metronidazole resistant Bacteroides strains from Kuwait7
Microbiological features, epidemiology, and clinical presentation of Clostridioides difficile strains from MLST Clade 2: A narrative review7
Prevalence of Clostridioides difficile associated diarrhea in hospitalized patients in five Brazilian centers: A multicenter, prospective study7
Carriage of Clostridioides difficile in healthy infants in the community of Handan, China: A 1-year follow-up study7
Risk factors of first recurrence of Clostridioides difficile infection7
Brain abscess mimicking acute stroke syndrome caused by dual Filifactor alocis and Porphyromonas gingivalis infections: A case report7
Population-based incidence of hospitalized Clostridioides difficile infection among older adults in Ota-ku, Japan: A prospective surveillance study6
The first case of Veillonella atypica bacteremia in a patient with renal pelvic tumor6
Evaluation of different antigenic preparations against necrotic enteritis in broiler birds using a novel Clostridium perfringens type G strain6
Gardnerella vaginalis in urinary tract infections, are men spared?6
Brain abscesses caused by anaerobic bacteria6
Growth of succinate consumer Dialister hominis is supported by Bacteroides thetaiotaomicron6
MALDI-TOF MS: An alternative approach for ribotyping Clostridioides difficile isolates in Brazil6
Fusobacterium watanabei sp. nov. As additional species within the genus Fusobacerium, isolated from human clinical specimens6
Clinical and microbiological features of anaerobic implant-related infection in 80 patients after orthopedic surgery6
Antibiotic susceptibility screening of primate-associated Clostridium ventriculi6
Inhibitory effect of Brazilian red propolis on planktonic and biofilm forms of Clostridioides difficile6
Detailed analysis of metabolism reveals growth-rate-promoting interactions between Anaerostipes caccae and Bacteroides spp.6
Impact of COVID19 pandemic on the incidence of health-care associated Clostridioides difficile infection6
Comparative evaluation of MALDI-TOF MS and 16S rRNA gene sequencing for the identification of clinically relevant anaerobic bacteria: critical evaluation of discrepant results6
Expanding the repertoire of counterselection markers for markerless gene deletion in the human gut bacterium Phocaeicola vulgatus6
Effects of different culture media on growth of Treponema spp. isolated from digital dermatitis6
Clostridium perfringens α-toxin inhibits myogenic differentiation of C2C12 myoblasts6
A rare case of Clostridium paraputrificum bacteremia in a 78-year-old Caucasian man diagnosed with an intestinal neoplasm6
Six cases of Solobacterium moorei isolated alone or in mixed culture in Hungary and comparison with previously published cases6
Identification of oral anaerobic bacteria and the beta-lactamase resistance genes from Iranian patients with periodontitis6
Comparative clinical outcomes evaluation of hospitalized patients infected with Clostridioides difficile ribotype 106 vs. other toxigenic strains6
First reported case of Robinsoniella peoriensis pyometra and bloodstream infection: A case report and review of the literature6
Norepinephrine induces growth of Desulfovibrio vulgaris in an iron dependent manner6
Genetic and phenotypic characteristics of Clostridium (Clostridioides) difficile from canine, bovine, and pediatric populations5
Native joint infections caused by Parvimonas micra5
Prevalence, toxinotyping, antimicrobial susceptibility and biofilm-forming ability of Clostridium perfringens isolated from free-living rodents and shrews5
Geographical differences in tonsillar carriage rates of Fusobacterium necrophorum – A cross-sectional study in Sweden and Zambia5
Sepsis caused by Anaerococcus nagyae after transarterial-chemoembolization for hepatocellular carcinoma: Case report and literature review5
Development and clinical validation of an automated cell cytotoxicity neutralization assay for detecting Clostridioides difficile toxins in clinically relevant stools samples5
Does over a century of aerobic phage work provide a solid framework for the study of phages in the gut?5
Gas gangrene-associated gliding motility is regulated by the Clostridium perfringens CpAL/VirSR system5
A Clostridioides difficile surveillance study of Canadian retail meat samples from 2016-20185
In vivo model of Propionibacterium (Cutibacterium) spp. biofilm in Drosophila melanogaster5
A comparison of the antimicrobial resistance of fecal Bacteroides isolates and assessment of the composition of the intestinal microbiotas of carbapenem-treated and non-treated persons from Belgium an5
Bulleidia extructa: An underappreciated anaerobic pathogen5
A cost of illness comparison for toxigenic Clostridioides difficile diagnosis algorithms in developing countries5
Detection of associated bacteria in aspiration pneumonia and lung abscesses using partial 16S rRNA gene amplicon sequencing5
Characterization of G-type Clostridium perfringens bacteriophages and their disinfection effect on chicken meat5
Contamination of home-grown and retail vegetables with Clostridioides difficile5
Anti-toxin antibody is not associated with recurrent Clostridium difficile infection5
Probiotic-related Clostridium butyricum bacteremia: a case report and literature review5
Development of a clinical prediction model for recurrence and mortality outcomes after Clostridioides difficile infection using a machine learning approach5
Motility and the genotype diversity of the flagellin genes fliC and fliD among Clostridioides difficile ribotypes5
Rapid detection and surveillance of cfiA-positive Bacteroides fragilis using matrix-assisted laser desorption ionization time-of-flight mass spectrometry5
Multi-country surveillance of Clostridioides difficile demonstrates high prevalence of spores in non-healthcare environmental settings5
High prevalence of cfiA positive Bacteroides fragilis isolates collected at a teaching hospital in Hohhot, China5
Inflammatory modulation and outer membrane vesicles (OMV) production associated to Bacteroides fragilis response to subinhibitory concentrations of metronidazole during experimental infection5
Catabacter hongkongensis bacteremia identified by direct metagenomic sequencing of positive blood culture fluid, first case report in the US5
Identification of enterotoxigenic Bacteroides fragilis in patients with diarrhea: A study targeting 16S rRNA, gyrB and nanH genes5
Clostridioides (Clostridium) difficile in children with diarrhoea in Vietnam5
Prevalence of cpe-positive Clostridium perfringens in surface-attached soil of commercially available potatoes and its significance as a potential source of food poisoning5
Identification of cfxA gene variants and susceptibility patterns in β-lactamase-producing Prevotella strains5
Characterization of medical relevant anaerobic microorganisms by isothermal microcalorimetry5
Probiotics improve re-epithelialization of scratches infected by Porphyromonas gingivalis through up-regulating CXCL8-CXCR1/CXCR2 axis5
A systematic review and meta-analysis of decontamination methods to prevent hospital environmental contamination and transmission of Clostridioides difficile4
Detection of methanogens in peri-appendicular abscesses: Report of four cases4
Butyricimonas faecihominis and Eubacterium callanderi mixed bloodstream infection after appendicular peritonitis4
Characterization of mobile genetic elements in multidrug-resistant Bacteroides fragilis isolates from different hospitals in the Netherlands4
In vivo pharmacodynamics of lascufloxacin and levofloxacin against Streptococcus pneumoniae and Prevotella intermedia in a pneumonia mixed-infection mouse model4
A review of epidemiological models of Clostridioides difficile transmission and control (2009–2021)4
Presence of Clostridioides difficile in cattle feces, carcasses, and slaughterhouses: Molecular characterization and antibacterial susceptibility of the recovered isolates4
First large-scale study of antimicrobial susceptibility data, and genetic resistance determinants, in Fusobacterium necrophorum highlighting the importance of continuing focused susceptibility trend s4
Intracranial abscess due to Prevotella bivia: First case report from India4
Clostridioides difficile from intracardiac vegetation4
Polymicrobial bacteremia due to Lactobacillus jensenii and Veillonella montpellierensis in a pregnant patient; case report and review of literature4
Antimicrobial susceptibility patterns of anaerobic bacteria at an Irish University Hospital over a ten-year period (2010–2020)4
Clonal diversity of Clostridium perfringens human clinical isolates with various toxin gene profiles based on multilocus sequence typing and alpha-toxin (PLC) typing4
Bacteremia due to Prevotella oris of probable hepatic origin4
Urinary tract infections caused by anaerobic bacteria. Utility of anaerobic urine culture4
Linkage study of surveillance and hospital admission data to investigate Clostridium difficile infection in hospital patients in Perth, Western Australia4
Genetic diversity and phylogenetic analysis of the surface layer protein A gene (slpA) among Clostridioides difficile clinical isolates from Tehran, Iran4
Paraclostridium dentum, a novel species with pathogenic features isolated from human dental plaque sample4
Preferential use of plant glycans for growth by Bacteroides ovatus4
The role of Actinomyces spp. and related organisms in cervicofacial infections: Pathomechanism, diagnosis and therapeutic aspects4
Lactobacillus acidophilus regulates abnormal serotonin availability in experimental ulcerative colitis4
First reported case of Lachnoanaerobaculum gingivalis bacteremia in an acute myeloid leukemia patient with oral mucositis during high dose chemotherapy4
Laboratory diagnosis of Clostridioides (Clostridium) difficile infection in domestic animals: A short review4
Recognizing Cutibacterium acnes as a cause of infectious pericarditis: A case report and review of literature3
Bifidobacterium bacteraemia is rare with routine probiotics use in preterm infants: A further case report with literature review3
Antimicrobial susceptibility testing of Eggerthella lenta blood culture isolates at a university hospital in Belgium from 2004 to 20183
First case of abdominal infection caused by bacteroides fluxus3
Isoeugenol-functionalized nanogels inhibit peri-implantitis associated bacteria in vitro3
Bacteroides fragilis vertebral osteomyelitis: A rare clinical entity3
Molecular study on metronidazole resistance in Bacteroides fragilis group isolates from a South Indian tertiary care center3
Colitis caused by Clostridioides difficile infection in a domestic dog: A case report3
In vitro sensitivity of 30 anaerobic bacterial strains of the human intestinal core microbiota to antibiotics: Culture and LC-MS/MS approaches3
Changes in treatment of community-onset Clostridioides difficile infection after release of updated guidelines, Atlanta, Georgia, 20183
Clinical and microbiological characteristics of Ruminococcus gnavus bacteremia and intra-abdominal infection3
Rapid release of sepsis markers heparin-binding protein and calprotectin triggered by anaerobic cocci poses an underestimated threat3
Low prevalence of Cutibacterium acnes in prostatic tissue biopsies in a French hospital3
Development of multiplex PCR panel for detection of anaerobic bacteria in clinical samples3
Clostridioides difficile: New global perspectives3
The first case of septic arthritis of the knee caused by Eggerthia catenaformis3
Molecular characterization of pathogenicity locus (PaLoc) and tcdC genetic diversity among tcdAB Clostridioides difficile clinical isolates in Tehran, Iran3
Prosthetic joint infection caused by an atypical gram-negative bacilli: Odoribacter splanchnicus3
Antimicrobial susceptibility testing of anaerobic bacteria causing bacteremia: A 13-year (2010–2022) retrospective study in a tertiary hospital3
Peritoneal dialysis catheter-associated polymicrobial infection including Actinomyces neuii: Case report and brief literature review3
Clostridioides difficile PCR Tcdb Cycle Threshold predicts toxin EIA positivity but not severity of infection3
Unusual case of necrotizing pneumonia caused by Fusobacterium nucleatum complicating influenza a virus infection3
Enhancing biogas generation from lignocellulosic biomass through biological pretreatment: Exploring the role of ruminant microbes and anaerobic fungi3
An uncommon case of native joint septic arthritis by Parvimonas micra3
Association between antiulcer agents and Clostridioides difficile infection in patients receiving antibiotics: A retrospective cohort study using the diagnosis procedure combination database in Japan3
False amoxicillin/clavulanic acid susceptibility in Bacteroides fragilis using gradient strip tests3
Detection of Clostridioides difficile in hospital environment by using C diff Banana Broth™3
Polymicrobial anaerobic sepsis due to Bacteroides fragilis, Eggerthella lenta, Ruminoccocus gnavus, and Bilophila wadsworthia in a patient with myeloproliferative neoplasm3
Prevotella oris: A lesser known etiological agent of pleural effusion3
An inexpensive anaerobic chamber for the genetic manipulation of strictly anaerobic bacteria3
Short blood culture time-to-positivity in Fusobacterium necrophorum bacteremia is associated with Lemierre's syndrome3
Prevalence, genetic characteristics, and antimicrobial resistance of Clostridioides difficile isolates from horses in Korea3
A tale of two unusual anaerobic bacterial infections in an immunocompetent man: A case report and literature review3
Anaerobes in specific infectious and noninfectious diseases: new developments3
Septic shock caused by Slackia exigua in a patient with diabetes3
Membrane vesicles of Lactobacillus gasseri ATCC 19992 disrupt biofilms of vaginal pathogens3
Pacemaker infection and endocarditis due to Parvimonas micra: A case report and systematic review3
Generating a fucose permease deletion mutant in Bifidobacterium longum subspecies infantis ATCC 156973
Theophylline-based control of repA on a Clostridioides difficile plasmid for use in allelic exchange3
Brain abscess caused by Parvimonas micra: A rare case report and literature review3
Emerging alternatives against Clostridioides difficile infection3
Different breakpoints interpretation yielded distinct resistance rates to moxifloxacin of clinically significant anaerobic bacteria3
A rare case of necrotizing fasciitis of the abdominal wall due to Hungatella effluvii and Streptococcus constellatus3
A case of Slackia exigua bacteremia associated with pyometra in a patient with poor dentition3
Description and comparative genome analysis of Hallella absiana sp. nov., isolated from pig feces3
Characterization of the components of the thioredoxin system in Bacteroides fragilis and evaluation of its activity during oxidative stress3
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