Journal of Biomedical Optics

Papers
(The median citation count of Journal of Biomedical Optics is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-06-01 to 2025-06-01.)
ArticleCitations
Intraoperative characterization of cardiac tissue: the potential of light scattering spectroscopy137
Optimization of in vivo Cherenkov imaging dosimetry via spectral choices for ambient background lights and filtering95
In vivo hamster cheek pouch subepithelial ablation, biomaterial injection, and localization: pilot study76
Assessment of nonalcoholic fatty liver function by photoacoustic imaging55
Automatic correction of motion artifact in dynamic contrast-enhanced fluorescence imaging during open orthopedic surgery46
Effects of phantom microstructure on their optical properties45
Comparative analysis of intraoperative thermal and optical imaging for identification of the human primary sensory cortex43
Er:YAG laser biofilm removal from zero-gap periodontal/peri-implant model system mimicking clinical attachment loss40
Approaching closed spherical, full-view detection for photoacoustic tomography37
Remote and low-cost intraocular pressure monitoring by deep learning of speckle patterns36
Monte Carlo simulation of the effect of melanin concentration on light–tissue interactions for transmittance pulse oximetry measurement35
Looking for a perfect match: multimodal combinations of Raman spectroscopy for biomedical applications33
Generalized 3D registration algorithm for enhancing retinal optical coherence tomography images33
Dual division of focal plane polarimeters-based collinear reflection Mueller matrix fast imaging microscope32
Wide dynamic range measurement of blood flow in vivo using laser speckle contrast imaging29
Bimodal multispectral imaging system with cloud-based machine learning algorithm for real-time screening and detection of oral potentially malignant lesions and biopsy guidance29
Improved spatial speckle contrast model for tissue blood flow imaging: effects of spatial correlation among neighboring camera pixels28
Meshless Monte Carlo radiation transfer method for curved geometries using signed distance functions25
Special Section Guest Editorial: Introduction to the Special Section Celebrating 30 years of Open Source Monte Carlo Codes in Biomedical Optics24
Two-step verification method for Monte Carlo codes in biomedical optics applications24
Stain-free enucleation of mouse and human oocytes with a 1033 nm femtosecond laser23
Solid optical tissue phantom tools based on upconverting nanoparticles for biomedical applications23
Spectral correction of light emitting diodes enables accurate hydration ratio calculation using narrowband diffuse reflectance spectroscopy23
Tissue harvest with a laser microbiopsy (Erratum)22
Automatic detection of head and neck squamous cell carcinoma on histologic slides using hyperspectral microscopic imaging22
High-sensitivity dynamic diffuse fluorescence tomography system for fluorescence pharmacokinetics21
Depolarization diagrams for circularly polarized light scattering for biological particle monitoring21
Assessing spectral effectiveness in color fundus photography for deep learning classification of retinopathy of prematurity21
Multiplexed optical fiber cell temperature sensing system with high sensitivity and accuracy21
Difference imaging from single measurements in diffuse optical tomography: a deep learning approach20
Polarization-insensitive optical coherence tomography using pseudo-depolarized reference light for mitigating birefringence-related image artifacts20
Real-time tracking of a diffuse reflectance spectroscopy probe used to aid histological validation of margin assessment in upper gastrointestinal cancer resection surgery20
All-reflective tethered capsule endoscope for multimodal optical coherence tomography in the esophagus19
Deep learning-based optical approach for skin analysis of melanin and hemoglobin distribution18
Minimizing near-infrared autofluorescence in preclinical imaging with diet and wavelength selection18
Hyperspectral imaging of 4T1 mammary carcinomas grown in dorsal skinfold window chambers: spectral renormalization and fluorescence modeling18
Impact of signal-to-noise ratio and contrast definition on the sensitivity assessment and benchmarking of fluorescence molecular imaging systems18
Enhanced resolution optoacoustic microscopy using a picosecond high repetition rate Q-switched microchip laser18
Mobile-based oral cancer classification for point-of-care screening17
Influence of optical aberrations on depth-specific spatial frequency domain techniques17
Impact of illumination spectrum and eye pigmentation on image quality from a fundus camera using transscleral illumination17
Photoacoustic imaging plus X: a review17
Scattering angle resolved optical coherence tomography measures morphological changes in Bacillus subtilis colonies16
Retrieval of chromophore concentration changes in a digital human head model using analytical mean partial pathlengths of photons16
Laser absorption spectroscopy measurements of different pulmonary oxygen gas concentrations in transmittance and remittance geometry: phantom study16
Spatial analysis of polarimetric images to enhance near-surface sampling sensitivity: feasibility in demineralized teeth and other tissue-like media16
Quantitative dynamic near-infrared fluorescence imaging using indocyanine green for analysis of bowel perfusion after mesenteric resection15
Comparison of minimal detectable protoporphyrin IX concentrations with a loupe device and conventional 5-ALA fluorescence microscopy: an experimental study15
Direct three-dimensional segmentation of prostate glands with nnU-Net15
Deep structural brain imaging via computational three-photon microscopy15
Noise insensitive volumetric fusion method for enhanced photoacoustic microscopy15
MCDataset: a public reference dataset of Monte Carlo simulated quantities for multilayered and voxelated tissues computed by massively parallel PyXOpto Python package15
Automated three-dimensional image registration for longitudinal photoacoustic imaging15
CellSNAP: a fast, accurate algorithm for 3D cell segmentation in quantitative phase imaging15
Conversion of imager-specific response to tissue phantom fluorescence into system of units-traceable units14
Automatic granular and spinous epidermal cell identification and analysis on in vivo reflectance confocal microscopy images using cell morphological features14
Evaluating clinical near-infrared surgical camera systems with a view to optimizing operator and computational signal analysis14
Photoacoustic imaging on its way toward clinical utility: a tutorial review focusing on practical application in medicine14
Noise-robust phase-space deconvolution for light-field microscopy13
Intravital photoacoustic brain stimulation with high-precision13
Effects of patient-specific treatment planning on eligibility for photodynamic therapy of deep tissue abscess cavities: retrospective Monte Carlo simulation study13
Perspective on the optics of medical imaging13
Optical coherence tomography–enabled classification of the human venoatrial junction13
Development of a shortwave infrared sinuscope for the detection of cerebrospinal fluid leaks13
Reflective optical imaging for scattering medium using chaotic laser13
Depth distributions of bacteria for the Pseudomonas aeruginosa-infected burn wounds treated by methylene blue-mediated photodynamic therapy in rats: effects of additives to photosensitizer13
Deep learning-based spectroscopic single-molecule localization microscopy13
Characterization of bacteria swarming effect under plasmonic optical fiber illumination13
Characterizing factors influencing calibration and optical property determination in quantitative reflectance spectroscopy to improve standardization13
Label-free imaging flow cytometry for cell classification based directly on multiple off-axis holographic projections13
Dual-modality fluorescence lifetime imaging-optical coherence tomography intravascular catheter system with freeform catheter optics13
LED-based multicolor extended resolution transmission fluorescence microscopy13
Multiphoton microscopy for label-free multicolor imaging of peripheral nerve12
Assessment of open-field fluorescence guided surgery systems: implementing a standardized method for characterization and comparison12
New Year, New JBO Editor-in-Chief12
Design and validation of a high-speed hyperspectral laparoscopic imaging system12
Light-sheet autofluorescence lifetime imaging with a single-photon avalanche diode array12
Evaluating backscattering polarized light imaging microstructural mapping capabilities through neural tissue and analogous phantom imaging12
Clinical PDT dose dosimetry for pleural Photofrin-mediated photodynamic therapy12
Spatial frequency domain imager based on a compact multiaperture camera: testing and feasibility for noninvasive burn severity assessment12
Accurate and stable two-step LED position calibration method for Fourier ptychographic microscopy12
Classification of imbalanced oral cancer image data from high-risk population12
Toward fluorescence digital twins: multi-parameter experimental validation of fluorescence Monte Carlo simulations using solid phantoms12
Enhanced neuroimaging with a calcium sensor in ex-vivo Drosophila melanogaster brains using closed-loop adaptive optics light-sheet fluorescence microscopy11
Hyperspectral dark-field microscopy of human breast lumpectomy samples for tumor margin detection in breast-conserving surgery11
Perspectives in Biophotonics: a special issue in honor of the International Graduate Summer School on Biophotonics11
Utilizing convolutional neural networks for discriminating cancer and stromal cells in three-dimensional cell culture images with nuclei counterstain11
Restoration of metabolic functional metrics from label-free, two-photon human tissue images using multiscale deep-learning-based denoising algorithms11
Scaling down the dimensions of a Fabry–Perot polymer film acoustic sensor for photoacoustic endoscopy11
Reflection-mode acousto-optic imaging using plane wave ultrasound pulses11
Motion-artifact-free single shot two-beam optical coherence elastography system11
Incremental residual polarization caused by aging in human skin11
Imaging in thick samples, a phased Monte Carlo radiation transfer algorithm10
Influence mechanism of the temporal duration of laser irradiation on photoacoustic technique: a review10
Detection of live breast cancer cells in bright-field microscopy images containing white blood cells by image analysis and deep learning10
Motion-resistant three-wavelength spatial frequency domain imaging system with ambient light suppression using an 8-tap CMOS image sensor10
Evaluation of standardized performance test methods for biomedical Raman spectroscopy10
Two-stage classification strategy for breast cancer diagnosis using ultrasound-guided diffuse optical tomography and deep learning10
Comparison of diffuse correlation spectroscopy analytical models for measuring cerebral blood flow in adults10
Relationship between depth-wise refractive index and biomechanical properties of human articular cartilage10
Imaging the ex-vivo human cochlea using 1.3-μm and 1.7-μm optical coherence tomography10
Two-stage diffuse fluorescence tomography for monitoring of drug distribution in photodynamic therapy of tumors10
Wavefront shaping improves the transparency of the scattering media: a review (Publisher’s Note)10
Non-invasive assessment of sublingual microcirculation using flow derived from green light PPG: evaluation and reference values10
Mouthwash as a non-invasive method of indocyanine green delivery for near-infrared fluorescence dental imaging9
Noninvasive holographic sensor system for measuring stiffness of soft micro samples9
Toward the development of a polarimetric tool to diagnose the fibrotic human ventricular myocardium9
Field programmable gate array compression for large array multispeckle diffuse correlation spectroscopy9
Learnable real-time inference of molecular composition from diffuse spectroscopy of brain tissue9
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using a tilted fiber-optic probe in diffuse reflectance spectroscopy, part 1: a theoretical framework for 9
Honoring Lihong V. Wang, a pioneer in biomedical optics9
Transmission infrared micro-spectroscopic study of individual human hair9
Quantitative evaluation of the site-dependent cell viability in three-dimensional hepatocyte spheroids based on dynamic optical coherence tomography9
Age-related changes in diffuse optical tomography sensitivity profiles from childhood to adulthood9
Perspective on the use of fluorescence molecular imaging for peripheral and deep en face margin assessment8
Off-axis digital lensless holographic microscopy based on spatially multiplexed interferometry8
Deep-learning approach to stratified reconstructions of tissue absorption and scattering in time-domain spatial frequency domain imaging8
Development and preclinical evaluation of an endonasal Raman spectroscopy probe for transsphenoidal pituitary adenoma surgery8
Polydimethylsiloxane tissue-mimicking phantoms with tunable optical properties8
Remote sensing of alcohol consumption using machine learning speckle pattern analysis8
Deep learning segmentation of periarterial and perivenous capillary-free zones in optical coherence tomography angiography8
Multi-laboratory performance assessment of diffuse optics instruments: the BitMap exercise8
Fast and robust Fourier ptychographic microscopy with position misalignment correction8
Fiber-based photoacoustic remote sensing microscopy and spectral-domain optical coherence tomography with a dual-function 1050-nm interrogation source8
Evaluating blue light impact on reconstructed human epidermis using laser speckle imaging8
Photoplethysmographic imaging and analysis of pulsatile pressure wave in palmar artery at 10 wavelengths8
Hardware-software co-design of an open-source automatic multimodal whole slide histopathology imaging system8
Multiresolution nondestructive 3D pathology of whole lymph nodes for breast cancer staging8
Skin chromophore mapping by smartphone RGB camera under spectral band and spectral line illumination8
Robust, high-density lesion mapping in the left atrium with near-infrared spectroscopy8
Real-time identification of life-threatening necrotizing soft-tissue infections using indocyanine green fluorescence imaging8
Single-distance and dual-slope frequency-domain near-infrared spectroscopy to assess skeletal muscle hemodynamics8
Patient-specific arterial input function for accurate perfusion assessment in intraoperative fluorescence imaging8
Wavefront shaping improves the transparency of the scattering media: a review8
Structurally constrained and pathology-aware convolutional transformer generative adversarial network for virtual histology staining of human coronary optical coherence tomography images8
HyperTRCSS: A hyperspectral time-resolved compressive sensing spectrometer for depth-sensitive monitoring of cytochrome-c-oxidase and blood oxygenation8
Photoacoustic and fluorescence dual-modality imaging of cerebral biomarkers in Alzheimer’s disease rodent model8
Two-color fluorescence-guided surgery for head and neck cancer resections8
Depth detection limit of a fluorescent object in tissue-like medium with background emission in continuous-wave measurements: a phantom study8
Comprehensive framework of GPU-accelerated image reconstruction for photoacoustic computed tomography8
Hyperspectral imaging in neurosurgery: a review of systems, computational methods, and clinical applications8
Combined frequency domain near-infrared spectroscopy and diffuse correlation spectroscopy system for comprehensive metabolic monitoring of inspiratory muscles during loading8
Förster resonance energy transfer efficiency measurements on vinculin tension sensors at focal adhesions using a simple and cost-effective setup8
Exploring near-infrared autofluorescence properties in parathyroid tissue: an analysis of fresh and paraffin-embedded thyroidectomy specimens8
Beer–Lambert law for optical tissue diagnostics: current state of the art and the main limitations8
Detection of breast cancer using machine learning on time-series diffuse optical transillumination data7
Convolutional neural network-based regression analysis to predict subnuclear chromatin organization from two-dimensional optical scattering signals7
Improved U-net-based leukocyte segmentation method7
Label-free quantitative measurement of cardiovascular dynamics in a zebrafish embryo using frequency-comb-referenced-quantitative phase imaging7
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using tilted fiber-optic probe diffuse reflectance spectroscopy, part 2: probe design, realization, and ex7
Systematic comparison of fluorescence imaging in the near-infrared and shortwave-infrared spectral range using clinical tumor samples containing cetuximab-IRDye800CW7
Improved in vivo optical coherence tomography imaging of animal peripheral nerves using a prism nerve holder7
Two-photon scanned light sheet fluorescence microscopy with axicon imaging for fast volumetric imaging7
Using Fourier ptychography microscopy to achieve high-resolution chromosome imaging: an initial evaluation7
Model for the diffuse reflectance in spatial frequency domain imaging (Erratum)7
Targeted multispectral filter array design for the optimization of endoscopic cancer detection in the gastrointestinal tract7
Method for measurement of collagen monomer orientation in fluorescence microscopy7
Monte Carlo simulation of spatial frequency domain imaging for breast tumors during compression7
Quantitative phase imaging techniques for measuring scattering properties of cells and tissues: a review—part I7
Basis function model to extract the combined confocal and fall-off function from multiple optical coherence tomography A-scans7
Kernel Flow: a high channel count scalable time-domain functional near-infrared spectroscopy system7
Detection properties of indium-111 and IRDye800CW for intraoperative molecular imaging use across tissue phantom models7
Convolutional neural network advances in demosaicing for fluorescent cancer imaging with color–near-infrared sensors7
Compact and cost-effective laser-powered speckle contrast optical spectroscopy fiber-free device for measuring cerebral blood flow7
Deep-learning-based cross-modality translation from Stokes image to bright-field contrast7
Perspectives on interstitial photodynamic therapy for malignant tumors7
Optofluidic flow meter for sub-nanoliter per minute flow measurements7
Customizable optical tissue phantom platform for characterization of fluorescence imaging device sensitivity7
Femtosecond laser-assisted selective holding with ultra-low power for direct manipulation of biological species7
Compact and ultracompact spectral imagers: technology and applications in biomedical imaging7
Elucidating the effect of tumor and background region-of-interest selection on the performance metrics used to assess fluorescence imaging7
Adaptive correction method of hybrid aberrations in Fourier ptychographic microscopy7
Ninety years of pulse oximetry: history, current status, and outlook7
Optimizing optical coherence tomography to detect occult spermatozoa in rat testis after induced non-obstructive azoospermia7
Impact of corpus callosum fiber tract crossing on polarimetric images of human brain histological sections: ex vivo studies in transmission configuration7
Looking deep inside tissue with photoacoustic molecular probes: a review6
Multichromatic near-infrared imaging to assess interstitial lymphatic and venous uptake in vivo6
JBO 2024 List of Reviewers6
Subsurface fluorescence time-of-flight imaging using a large-format single-photon avalanche diode sensor for tumor depth assessment6
Acoustic resolution photoacoustic Doppler flowmetry for assessment of patient rectal cancer blood perfusion6
Multivariate analysis of breast tissue using optical parameters extracted from a combined time-resolved fluorescence and diffuse reflectance system for tumor margin detection6
Macroscopic inelastic scattering imaging using a hyperspectral line-scanning system identifies invasive breast cancer in lumpectomy and mastectomy specimens6
Can diffuse reflectance spectroscopy identify shuntodynia in pediatric hydrocephalus patients?6
Special Section Guest Editorial: Tissue Phantoms to Advance Biomedical Optical Systems6
Fluid mechanics approach to analyzing collagen fiber organization6
Image-guided Raman spectroscopy navigation system to improve transperineal prostate cancer detection. Part 2: in-vivo tumor-targeting using a classification model combining spectral and MRI-radiomics 6
Self-calibrated pulse oximetry algorithm based on photon pathlength change and the application in human freedivers6
Integration of cellular-resolution optical coherence tomography and Raman spectroscopy for discrimination of skin cancer cells with machine learning6
Cherenkov light emission in external beam radiation therapy of the larynx6
Sub-millimeter endoscope demonstrates feasibility of in vivo reflectance imaging, fluorescence imaging, and cell collection in the fallopian tubes6
Large field-of-view short-wave infrared metalens for scanning fiber endoscopy6
Improving diffuse optical tomography imaging quality using APU-Net: an attention-based physical U-Net model6
Spectral analysis of multiple scattering factors of turbid media for glucose measurement using near-infrared spectroscopy6
Water and hemoglobin modulated gelatin-based phantoms to spectrally mimic inflamed tissue in the validation of biomedical techniques and the modeling of microdialysis data6
X-ray Cherenkov-luminescence tomography reconstruction with a three-component deep learning algorithm: Swin transformer, convolutional neural network, and locality module6
Transport-of-intensity phase imaging using commercially available confocal microscope6
Analysis of muscle tissue in vivo using fiber-optic autofluorescence and diffuse reflectance spectroscopy6
Reconstruction of fluorophore absorption and fluorescence lifetime using early photon mesoscopic fluorescence molecular tomography: a phantom study6
Time-of-flight and noise-correlation-inspired algorithms for full-field shear-wave elastography using digital holography5
Characterization of Mueller matrix elements for classifying human skin cancer utilizing random forest algorithm5
Assessing the effects of prenatal poly-drug exposure on fetal brain vasculature using optical coherence angiography5
Frameworks of wavelength selection in diffuse reflectance spectroscopy for tissue differentiation in orthopedic surgery5
Polarized hyperspectral microscopic imaging system for enhancing the visualization of collagen fibers and head and neck squamous cell carcinoma5
Imaging the rotational mobility of carbon dot-gold nanoparticle conjugates using frequency domain wide-field time-resolved fluorescence anisotropy5
Tetherless miniaturized point detector device for monitoring cortical surface hemodynamics in mice5
Enhancing intraoperative tumor delineation with multispectral short-wave infrared fluorescence imaging and machine learning5
Challenges and advances in two-dimensional photoacoustic computed tomography: a review5
Dimensional reduction based on peak fitting of Raman micro spectroscopy data improves detection of prostate cancer in tissue specimens5
Measuring and imaging of transcutaneous bilirubin, hemoglobin, and melanin based on diffuse reflectance spectroscopy5
Margin assessment during breast conserving surgery using diffuse reflectance spectroscopy5
Near-infrared imaging of head and neck squamous cell carcinoma using indocyanine green that targets the αvβ6 peptide5
Determination of tissue oxygen saturation by diffuse reflectance spectroscopy5
Simultaneous assessment of NAD(P)H and flavins with multispectral fluorescence lifetime imaging microscopy at a single excitation wavelength of 750 nm5
Mueller matrix analysis of a biologically sourced engineered tissue construct as polarimetric phantom5
Analyzing the influence of oblique incidence on quantitative backscattering tissue polarimetry: a pilot ex vivo study5
Bubble dynamics and speed of jets for needle-free injections produced by thermocavitation5
Neighbor-based adaptive sparsity orthogonal least square for fluorescence molecular tomography5
Dedicated near-infrared oximeter to monitor oxygenation in the superior sagittal sinus in newborn infants: a research agenda5
Spectral characterization of liquid hemoglobin phantoms with varying oxygenation states5
Light-guided dynamic phantom to mimic microvasculature for biomedical applications: an exploration for pulse oximeter5
Increased fluorescence observation intensity during the photodynamic diagnosis of deeply located tumors by fluorescence photoswitching of protoporphyrin IX5
Accuracy and precision of depth-resolved estimation of attenuation coefficients in optical coherence tomography5
Review of consensus test methods in medical imaging and current practices in photoacoustic image quality assessment5
Rapid inverse radiative transfer solver for multiparameter spectrophotometry without integrating sphere5
Deep-learning–enabled spatial frequency domain imaging of the spatiotemporal dynamics of skin physiology5
Protoporphyrin IX delayed fluorescence imaging: a modality for hypoxia-based surgical guidance5
Three-dimensional C-scan-based generation adversarial network with synthetic input to improve optical coherence tomography angiography5
Multiwavelength tissue-mimicking phantoms with tunable vessel pulsation5
Erythrocyte nano-ghosts with dual optical and magnetic resonance characteristics5
Machine learning–based classification of spatially resolved diffuse reflectance and autofluorescence spectra acquired on human skin for actinic keratoses and skin carcinoma diagnostics aid5
Photoacoustic imaging of the dynamics of a dye-labeled IgG4 monoclonal antibody in subcutaneous tissue reveals a transient decrease in murine blood oxygenation under anesthesia5
Fiftieth anniversary of fiber optic–based fluorometry of brain mitochondrial NADH redox state monitored in vivo5
Depth-dependent attenuation and backscattering characterization of optical coherence tomography by stationary iterative method5
Subcellular analysis of nuclear and cytoplasmic redox indices differentiates breast cancer cell subtypes better than nuclear-to-cytoplasmic area ratio5
ArthroNavi framework: stereo endoscope-guided instrument localization for arthroscopic minimally invasive surgeries5
Multifocal acoustic radiation force-based reverberant optical coherence elastography for evaluation of ocular globe biomechanical properties5
Accuracy enhancement of metabolic index-based blood glucose estimation with a screening process for low-quality data4
Cascaded domain multiphoton spatial frequency modulation imaging4
Robustness of tissue oxygenation estimates by continuous wave space-resolved near infrared spectroscopy4
In vivo two-photon-excited cellular fluorescence of melanin, NAD(P)H, and keratin enables an accurate differential diagnosis of seborrheic keratosis and pigmented cutaneous melanoma4
Ultra-miniature dual-wavelength spatial frequency domain imaging for micro-endoscopy4
Generative adversarial network based digital stain conversion for generating RGB EVG stained image from hyperspectral H&E stained image4
Investigation of image plane for image reconstruction of objects through diffusers via deep learning4
iStent insertion orientation and impact on trabecular meshwork motion resolved by optical coherence tomography imaging4
Hyperspectral imaging with deep learning for quantification of tissue hemoglobin, melanin, and scattering4
Smartphone-based dual radiometric fluorescence and white-light imager for quantification of protoporphyrin IX in skin4
Semisupervised representative learning for measuring epidermal thickness in human subjects in optical coherence tomography by leveraging datasets from rodent models4
Quantitative photothermal analysis and multispectral imaging of dental structures: insights into optical and thermal properties of carious and healthy teeth4
Interpretable deep learning approach for oral cancer classification using guided attention inference network4
Fluorescence-guided surgical system using holographic display: from phantom studies to canine patients4
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