Journal of Biomedical Optics

Article	Citations
Fiber-based photoacoustic remote sensing microscopy and spectral-domain optical coherence tomography with a dual-function 1050-nm interrogation source	113
Deep-learning approach to stratified reconstructions of tissue absorption and scattering in time-domain spatial frequency domain imaging	88
Low-cost microvascular phantom for photoacoustic imaging using loofah	77
Characterization and identification of cell death dynamics by quantitative phase imaging	71
Investigation of image plane for image reconstruction of objects through diffusers via deep learning	58
Minimally invasive intrathecal spinal cord imaging with optical coherence tomography	52
Er:YAG laser biofilm removal from zero-gap periodontal/peri-implant model system mimicking clinical attachment loss	43
Hyperspectral imaging with deep learning for quantification of tissue hemoglobin, melanin, and scattering	39
High-resolution lensless holographic microscopy using a physics-aware deep network	38
PoLambRimetry: a multispectral polarimetric atlas of lamb brain	37
Remote sensing of alcohol consumption using machine learning speckle pattern analysis	35
Dermoscopy and skin imaging light sources: a comparison and review of spectral power distribution and color consistency	32
Comparative analysis of intraoperative thermal and optical imaging for identification of the human primary sensory cortex	31
Wearable optical coherence tomography angiography probe with extended depth of field	29
Hyperspectral analysis to assess gametocytogenesis stage progression in malaria-infected human erythrocytes	28
Speckle-illumination spatial frequency domain imaging with a stereo laparoscope for profile-corrected optical property mapping	27
Semisupervised representative learning for measuring epidermal thickness in human subjects in optical coherence tomography by leveraging datasets from rodent models	26
Quantitative assessment of the generalizability of a brain tumor Raman spectroscopy machine learning model to various tumor types including astrocytoma and oligodendroglioma	26
In vivo hamster cheek pouch subepithelial ablation, biomaterial injection, and localization: pilot study	23
Corneal absorption spectra in the deep UV range	23
Segmentation of the urothelium in optical coherence tomography images with dynamic contrast	22
Optimization of handheld spectrally encoded coherence tomography and reflectometry for point-of-care ophthalmic diagnostic imaging	22
Discrimination of cancerous from benign pigmented skin lesions based on multispectral autofluorescence lifetime imaging dermoscopy and machine learning	22
Monte Carlo simulation of the effect of melanin concentration on light–tissue interactions for transmittance pulse oximetry measurement	21
Improved intraoperative identification of close margins in oral squamous cell carcinoma resections using a dual aperture fluorescence ratio approach: first in-human results	21

Optimization of in vivo Cherenkov imaging dosimetry via spectral choices for ambient background lights and filtering	21
Fast and robust Fourier ptychographic microscopy with position misalignment correction	20
Robustness of tissue oxygenation estimates by continuous wave space-resolved near infrared spectroscopy	20
Generative adversarial network based digital stain conversion for generating RGB EVG stained image from hyperspectral H&E stained image	20
Wavefront shaping improves the transparency of the scattering media: a review	19
Signal to noise ratio quantifies the contribution of spectral channels to classification of human head and neck tissues ex vivo using deep learning and multispectral imaging	18
Automatic correction of motion artifact in dynamic contrast-enhanced fluorescence imaging during open orthopedic surgery	18
Influence of edge enhancement applied in endoscopic systems on sharpness and noise (Erratum)	17
Hierarchical decision model for in vitro bilirubin content prediction from absorption spectrum of whole blood	17
Heavy water coupling gel for short-wave infrared photoacoustic imaging	16
Multiparameter interferometric polarization-enhanced imaging differentiates carcinoma in situ from inflammation of the bladder: an ex vivo study	16
Single acquisition label-free histology-like imaging with dual-contrast photoacoustic remote sensing microscopy (Errata)	16
Realization of NIR-II 3D whole-body contour and tumor blood vessels imaging in small animals using rotational stereo vision technique	16
Empirical method for rapid quantification of intrinsic fluorescence signals of key metabolic probes from optical spectra measured on tissue-mimicking turbid medium	16
Assessment of nonalcoholic fatty liver function by photoacoustic imaging	16
Quantitative photothermal analysis and multispectral imaging of dental structures: insights into optical and thermal properties of carious and healthy teeth	15
Intraoperative characterization of cardiac tissue: the potential of light scattering spectroscopy	15
Comprehensive framework of GPU-accelerated image reconstruction for photoacoustic computed tomography	15
Special Section Guest Editorial: Polarimetry in Biomedical Optics	15
Generalized 3D registration algorithm for enhancing retinal optical coherence tomography images	15
Effects of phantom microstructure on their optical properties	14
Design, implementation, and analysis of a compressed sensing photoacoustic projection imaging system	14
TIE-GANs: single-shot quantitative phase imaging using transport of intensity equation with integration of GANs	14
Use of topical methylene blue to image nuclear morphometry with a low-cost scanning darkfield microendoscope	14
Image-guided Raman spectroscopy navigation system to improve transperineal prostate cancer detection. Part 1: Raman spectroscopy fiber-optics system and in situ tissue characterization	13
Real-time identification of life-threatening necrotizing soft-tissue infections using indocyanine green fluorescence imaging	13
Förster resonance energy transfer efficiency measurements on vinculin tension sensors at focal adhesions using a simple and cost-effective setup	12
Pulse Oximetry: 50 Years of Inventions & Discoveries in Biomedical Optics	12
Optical manipulation: advances for biophotonics in the 21st century	12
Ultrasmall compact CMOS imaging system for bioluminescence reporter-based live gene expression analysis	12
In vivo retinal melanin detection with the calibrated depolarization index in polarization-sensitive optical coherence tomography	12
Visualizing veins from color images under varying illuminations for medical applications	11
Large-field-of-view optical-resolution optoacoustic microscopy using a stationary silicon-photonics acoustic detector	11
Perspectives on interstitial photodynamic therapy for malignant tumors	11
Ultra-miniature dual-wavelength spatial frequency domain imaging for micro-endoscopy	11
Single-distance and dual-slope frequency-domain near-infrared spectroscopy to assess skeletal muscle hemodynamics	11
Remote and low-cost intraocular pressure monitoring by deep learning of speckle patterns	11
Combined flat-field and frequency filter approach to correcting artifacts of multichannel two-photon microscopy	11
Human embryonic stem cell classification: random network with autoencoded feature extractor	11
Robust, high-density lesion mapping in the left atrium with near-infrared spectroscopy	11
Modeling toolchain for realistic simulation of photoacoustic data acquisition	11
Single acquisition label-free histology-like imaging with dual-contrast photoacoustic remote sensing microscopy	10
Combined frequency domain near-infrared spectroscopy and diffuse correlation spectroscopy system for comprehensive metabolic monitoring of inspiratory muscles during loading	10
Optical clearing with tartrazine enables deep transscleral imaging with optical coherence tomography	10
Exploring the evolution of circular polarized light backscattered from turbid tissue-like disperse medium utilizing generalized Monte Carlo modeling approach with a combined use of Jones and Stokes–Mu	10
Identification of different types of tumors based on photoacoustic spectral analysis: preclinical feasibility studies on skin tumors	10
In vivo two-photon-excited cellular fluorescence of melanin, NAD(P)H, and keratin enables an accurate differential diagnosis of seborrheic keratosis and pigmented cutaneous melanoma	10
Assessment of photodynamic therapy efficacy against Escherichia coli–Enterococcus faecalis biofilms using optical coherence tomography	10
Optical coherence tomography holds promise to transform the diagnostic anatomic pathology gross evaluation process	10
Imaging sub-diffuse optical properties of cancerous and normal skin tissue using machine learning-aided spatial frequency domain imaging	10

Characterization of fluorescence lifetime of organic fluorophores for molecular imaging in the shortwave infrared window	10
Optical clearing with tartrazine enables deep transscleral imaging with optical coherence tomography	10
Wide dynamic range measurement of blood flow in vivo using laser speckle contrast imaging	10
Evaluation of visible diffuse reflectance spectroscopy in liver tissue: validation of tissue saturations using extracorporeal circulation	10
Dynamic SWIR imaging near the 1950-nm water absorption band for caries lesion diagnosis	9
Monte Carlo simulation of spatial frequency domain imaging for breast tumors during compression	9
Dependency of crossover point on absorption changes in bilayer diffusion reflection measurements	9
Optical absorption spectra and corresponding in vivo photoacoustic visualization of exposed peripheral nerves	9
Patient-specific arterial input function for accurate perfusion assessment in intraoperative fluorescence imaging	9
Dual division of focal plane polarimeters-based collinear reflection Mueller matrix fast imaging microscope	9
Cascaded domain multiphoton spatial frequency modulation imaging	9
Hyperspectral imaging in neurosurgery: a review of systems, computational methods, and clinical applications	9
Dual optical elastography detects TGF-β-induced alterations in the biomechanical properties of skin scaffolds	9
Depth detection limit of a fluorescent object in tissue-like medium with background emission in continuous-wave measurements: a phantom study	9
Review of optical reporters of radiation effects in vivo: tools to quantify improvements in radiation delivery technique	9
In vivo skin optical clearing efficacy quantification of clinically compatible agents using line-field confocal optical coherence tomography	9
Effects of shell-integrated Sudan Black dye on the acoustic activity and ultrasound imaging properties of lipid-shelled nanoscale ultrasound contrast agents	8
Femtosecond laser-assisted selective holding with ultra-low power for direct manipulation of biological species	8
Targeted multispectral filter array design for the optimization of endoscopic cancer detection in the gastrointestinal tract	8
Quantitative phase imaging techniques for measuring scattering properties of cells and tissues: a review—part I	8
Convolutional neural network advances in demosaicing for fluorescent cancer imaging with color–near-infrared sensors	8
Artificial neural networks trained on simulated multispectral data for real-time imaging of skin microcirculatory blood oxygen saturation	8
Looking for a perfect match: multimodal combinations of Raman spectroscopy for biomedical applications	8
Interpretable deep learning approach for oral cancer classification using guided attention inference network	8
Approaching closed spherical, full-view detection for photoacoustic tomography	8
Accuracy enhancement of metabolic index-based blood glucose estimation with a screening process for low-quality data	8
Estimation of diffuse Cherenkov optical emission from external beam radiation build-up in tissue	8
Polydimethylsiloxane tissue-mimicking phantoms with tunable optical properties	8
Compressed intracellular motility via non-uniform temporal sampling in dynamic optical coherence tomography	8
Skin chromophore mapping by smartphone RGB camera under spectral band and spectral line illumination	8
iStent insertion orientation and impact on trabecular meshwork motion resolved by optical coherence tomography imaging	8
Rapid, high-contrast, and steady volumetric imaging with Bessel-beam-based two-photon fluorescence microscopy	8
Saliva-based detection of COVID-19 infection in a real-world setting using reagent-free Raman spectroscopy and machine learning	8
Bimodal multispectral imaging system with cloud-based machine learning algorithm for real-time screening and detection of oral potentially malignant lesions and biopsy guidance	8
Multi-laboratory performance assessment of diffuse optics instruments: the BitMap exercise	8
Multimodal fluorescence lifetime imaging and optical coherence tomography for longitudinal monitoring of tissue-engineered cartilage maturation in a preclinical implantation model	8
Impact of signal-to-noise ratio and contrast definition on the sensitivity assessment and benchmarking of fluorescence molecular imaging systems	8
Hyperspectral imaging of 4T1 mammary carcinomas grown in dorsal skinfold window chambers: spectral renormalization and fluorescence modeling	8
Development and preclinical evaluation of an endonasal Raman spectroscopy probe for transsphenoidal pituitary adenoma surgery	8
Hyperspectral imaging for tumor segmentation on pigmented skin lesions	8
Improved spatial speckle contrast model for tissue blood flow imaging: effects of spatial correlation among neighboring camera pixels	8
Functional imaging with dynamic quantitative oblique back-illumination microscopy	8
Multimodal 3D photoacoustic remote sensing and confocal fluorescence microscopy imaging	7
Multiscale photoacoustic tomography of neural activities with GCaMP calcium indicators	7
Quantitative molecular bioluminescence tomography	7
Photonics probing of pup brain tissue and molecular-specific nuclear nanostructure alterations due to fetal alcoholism via light scattering/localization approaches	7
Meshless Monte Carlo radiation transfer method for curved geometries using signed distance functions	7
Special Section Guest Editorial: Wearable, Implantable, Mobile, and Remote Biomedical Optics and Photonics	7
Fluorescence-guided surgical system using holographic display: from phantom studies to canine patients	7
Impact of illumination spectrum and eye pigmentation on image quality from a fundus camera using transscleral illumination	7
Basis function model to extract the combined confocal and fall-off function from multiple optical coherence tomography A-scans	7
Deep-learning-based cross-modality translation from Stokes image to bright-field contrast	7
Extracellular pH affects the fluorescence lifetimes of metabolic co-factors	7
Phase contrast reflectance confocal brain imaging at 1650 nm	7
Experimental imaging and Monte Carlo modeling of ultrafast pulse propagation in thin scattering slabs	7
Spatial analysis of polarimetric images to enhance near-surface sampling sensitivity: feasibility in demineralized teeth and other tissue-like media	7
Method for measurement of collagen monomer orientation in fluorescence microscopy	7
Special Section Guest Editorial: Introduction to the Special Section Celebrating 30 years of Open Source Monte Carlo Codes in Biomedical Optics	7
Assessing spectral effectiveness in color fundus photography for deep learning classification of retinopathy of prematurity	7
Terahertz spectroscopy analysis of human corneal sublayers	7
Incorporating early and late-arriving photons to improve the reconstruction of cerebral hemodynamic responses acquired by time-resolved near-infrared spectroscopy	7
Sounding out the dynamics: a concise review of high-speed photoacoustic microscopy	7
Full-aperture extended-depth oblique plane microscopy through dynamic remote focusing	7
Speculum-free portable preterm imaging system	7
Three-dimensional vascular and metabolic imaging using inverted autofluorescence	7
Label-free differentiation of human pancreatic cancer, pancreatitis, and normal pancreatic tissue by molecular spectroscopy	7
Low-cost optofluidic add-on enables rapid selective plane illumination microscopy of C. elegans with a conventional wide-field microscope	7
Elastic property of sickle cell anemia and sickle cell trait red blood cells	7
Irradiance uniformity optimization for a photodynamic therapy treatment device with 3D scanner	7
Integration of cellular-resolution optical coherence tomography and Raman spectroscopy for discrimination of skin cancer cells with machine learning	7
Multispectral imaging of nailfold capillaries using light-emitting diode illumination	7
Deep learning-based optical approach for skin analysis of melanin and hemoglobin distribution	7
Inhibition of B-cell lymphoma 2 family proteins alters optical redox ratio, mitochondrial polarization, and cell energetics independent of cell state	6
Unsupervised super-resolution reconstruction of hyperspectral histology images for whole-slide imaging (Errata)	6
Noninvasive optical monitoring of pulmonary embolism: a Monte Carlo study on visible Chinese human thoracic tissues	6
Spectral correction of light emitting diodes enables accurate hydration ratio calculation using narrowband diffuse reflectance spectroscopy	6
Photoacoustic imaging plus X: a review	6
Multimodality system of x-ray and fluorescence based on Fourier single-pixel imaging for small animals	6
Special Section Guest Editorial: Short Wave Infrared Techniques and Applications in Biomedical Optics	6
Tissue harvest with a laser microbiopsy (Erratum)	6

Smartphone-based dual radiometric fluorescence and white-light imager for quantification of protoporphyrin IX in skin	6
Quantifying tissue properties and absolute hemodynamics using coherent spatial imaging	6
Real-time multispectral imaging for intraoperative monitoring of coronary artery bypass graft patency	6
Compact and ultracompact spectral imagers: technology and applications in biomedical imaging	6
Label-free quantitative measurement of cardiovascular dynamics in a zebrafish embryo using frequency-comb-referenced-quantitative phase imaging	6
Depolarization diagrams for circularly polarized light scattering for biological particle monitoring	6
Improved in vivo optical coherence tomography imaging of animal peripheral nerves using a prism nerve holder	6
Convolutional neural network-based regression analysis to predict subnuclear chromatin organization from two-dimensional optical scattering signals	6
Expanding the applicability of multiphoton fluorescence recovery after photobleaching by incorporating shear stress in laminar flow	6
Shortwave infrared diffuse optical wearable probe for quantification of water and lipid content in emulsion phantoms using deep learning	6
Solid optical tissue phantom tools based on upconverting nanoparticles for biomedical applications	6
Customizable optical tissue phantom platform for characterization of fluorescence imaging device sensitivity	6
Stochastic three-dimensional numerical phantoms to enable computational studies in quantitative optoacoustic computed tomography of breast cancer	6
Detection of breast cancer using machine learning on time-series diffuse optical transillumination data	6
Two-photon scanned light sheet fluorescence microscopy with axicon imaging for fast volumetric imaging	6
Three-dimensional tracking using a single-spot rotating point spread function created by a multiring spiral phase plate	6
Spatial frequency domain Mueller matrix imaging	6
Modular head-mounted cortical imaging device for chronic monitoring of intrinsic signals in mice	6
Mirau-based line-field confocal optical coherence tomography for three-dimensional high-resolution skin imaging	6
Multiplexed optical fiber cell temperature sensing system with high sensitivity and accuracy	6
Observation and density estimation of a large number of skin capillaries using wide-field portable video capillaroscopy and semantic segmentation	6
OCT particle tracking velocimetry of biofluids in a microparallel plate strain induction chamber	6
Optofluidic flow meter for sub-nanoliter per minute flow measurements	6
Development and characterization of phasor-based analysis for FLIM to evaluate the metabolic and epigenetic impact of HER2 inhibition on squamous cell carcinoma cultures	5
Analysis of structural effects of sickle cell disease on brain vasculature of mice using three-dimensional quantitative phase imaging	5
Monte Carlo method for assessment of a multimodal insertable biosensor	5
Model for the diffuse reflectance in spatial frequency domain imaging (Erratum)	5
Multiple illumination learned spectral decoloring for quantitative optoacoustic oximetry imaging	5
Model for the diffuse reflectance in spatial frequency domain imaging	5
Prediction of motion artifacts caused by translation in handheld laser speckle contrast imaging	5
In vivo microscopy as an adjunctive tool to guide detection, diagnosis, and treatment	5
To label or not: the need for validation in label-free imaging	5
Using Fourier ptychography microscopy to achieve high-resolution chromosome imaging: an initial evaluation	5
Stain-free enucleation of mouse and human oocytes with a 1033 nm femtosecond laser	5
Fluorescence guided surgery imaging systems for breast cancer identification: a systematic review	5
Designing a use-error robust machine learning model for quantitative analysis of diffuse reflectance spectra (Erratum)	5
Binary photoacoustic tomography for improved vasculature imaging	5
Skin characterization of diabetes mellitus revealed by polarization-sensitive optical coherence tomography imaging	5
Physically informed Monte Carlo simulation of dual-wedge prism-based spectroscopic single-molecule localization microscopy	5
Imperfect refractive index matching in scanning laser optical tomography and a method for digital correction	5
Targeted spectroscopy in the eye fundus	5
Dual-wavelength photoacoustic atlas method to estimate fractional methylene blue and hemoglobin contents	5
Label-free multimodal nonlinear optical imaging of needle biopsy cores for intraoperative cancer diagnosis	5
Barium sulfate and pigment admixture for photoacoustic and x-ray contrast imaging of the gut	5
High-sensitivity dynamic diffuse fluorescence tomography system for fluorescence pharmacokinetics	5
Polarization-insensitive optical coherence tomography using pseudo-depolarized reference light for mitigating birefringence-related image artifacts	5
Systematic comparison of fluorescence imaging in the near-infrared and shortwave-infrared spectral range using clinical tumor samples containing cetuximab-IRDye800CW	5
Video-rate endocavity photoacoustic/harmonic ultrasound imaging with miniaturized light delivery	5
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using tilted fiber-optic probe diffuse reflectance spectroscopy, part 2: probe design, realization, and ex	5
Fast 3D super-resolution imaging using a digital micromirror device and binary holography	5
Adaptive correction method of hybrid aberrations in Fourier ptychographic microscopy	5
Deep learning-based method to accurately estimate breast tissue optical properties in the presence of the chest wall	5
Point-of-care optical spectroscopy platform and ratio-metric algorithms for rapid and systematic functional characterization of biological models in vivo	5
Photoacoustic imaging for cutaneous melanoma assessment: a comprehensive review	5
Development of a protocol for whole-lung in vivo lung perfusion-assisted photodynamic therapy using a porcine model	5