DNA Research

Papers
(The median citation count of DNA Research is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)
ArticleCitations
Exploring the evolutionary process of alkannin/shikonin O-acyltransferases by a reliable Lithospermum erythrorhizon genome108
Genome Assembly of the temporary socially parasitic spiny ant Polyrhachis lamellidens and its host Camponotus japonicus37
Correction to: Mituru Takanami, 1929–202226
The complete mitogenome assemblies of 10 diploid potato clones reveal recombination and overlapping variants26
A chromosome-scale genome and transcriptomic analysis of the endangered tropical treeVatica mangachapoi(Dipterocarpaceae)26
Chromosomal-level genome assembly of the orchid tree Bauhinia variegata (Leguminosae; Cercidoideae) supports the allotetraploid origin hypothesis of Bauhinia22
Universal Surface Biotinylation: a simple, versatile and cost-effective sample multiplexing method for single-cell RNA-seq analysis21
Genome analysis of five recently described species of the CUG-Ser clade uncoversCandida theaeas a new hybrid lineage with pathogenic potential in theCandida parapsilosisspecies complex19
The genome sequence and demographic history of Przewalskia tangutica (Solanaceae), an endangered alpine plant on the Qinghai–Tibet Plateau19
Base-excision restriction enzymes: expanding the world of epigenetic immune systems18
A highly contiguous genome assembly of red perilla (Perilla frutescens) domesticated in Japan18
Draft genome sequence and tissue expression panel of Pacific saury (Cololabis saira)17
Comparison of CRISPR-Cas9-mediated megabase-scale genome deletion methods in mouse embryonic stem cells17
Evolution of the viral genomes of SARS-CoV-2 in association with the changes in local condition: a genomic epidemiological study of a suburban city of Japan17
Chromosome-level assembly, annotation and phylome of Pelobates cultripes, the western spadefoot toad17
A chromosome-level genome assembly provides insights into the local adaptation of Tamarix austromongolica in the Yellow River Basin, China16
Pan-lineage Mycobacterium tuberculosis reference genome for enhanced molecular diagnosis16
The burst of satellite DNA in Leptidea wood white butterflies and their putative role in karyotype evolution16
Time-dependent changes in genome-wide gene expression and post-transcriptional regulation across the post-death process in silkworm16
Chromosome-level genome assembly of the medicinal insect Blaps rhynchopetera using Nanopore and Hi-C technologies16
Chromosome-scale genome assembly of acerola (Malpighia emarginata DC.)15
Characterization and complexity of transcriptome inGymnocypris przewalskiiusing single-molecule long-read sequencing and RNA-seq14
Chromosome-level genome assembly of the endangered plant Tetraena mongolica14
Genome features of a novel hydrocarbonoclastic Chryseobacterium oranimense strain and its comparison to bacterial oil-degraders and to other C. oranimense strains14
High-quality genome assembly of an important biodiesel plant, Euphorbia lathyris L14
Correction to: Chromosome-level genome assembly of the medicinal insect Blaps rhynchopetera using Nanopore and Hi-C technologies13
Chromosome-scale genome assembly of a Japanese chili pepper landrace, Capsicum annuum ‘Takanotsume’13
Genome-wide identification and characterization of Fur-binding sites in the cyanobacteria Synechocystis sp. PCC 6803 and PCC 671413
Mituru Takanami, 1929–202213
Chromosome-scale assembly of barley cv. ‘Haruna Nijo’ as a resource for barley genetics13
Chromosome-level genome assembly of Pontederia cordata L. provides insights into its rapid adaptation and variation of flower colours13
Assessing genetic diversity and geographical differentiation in a global collection of wild soybean (Glycine soja Sieb. et Zucc.) and assigning a mini-core collection13
Elucidation of the speciation history of three sister species of crown-of-thorns starfish (Acanthaster spp.) based on genomic analysis11
A chromosome-level genome assembly of the pollinating fig wasp Valisia javana11
Chromosome-level genome assembly of Japanese chestnut (Castanea crenata Sieb. et Zucc.) reveals conserved chromosomal segments in woody rosids11
MCPtaggR: R package for accurate genotype calling in reduced representation sequencing data by eliminating error-prone markers based on genome comparison9
Chromosome-level genome assembly of the aquatic plant Nymphoides indica reveals transposable element bursts and NBS-LRR gene family expansion shedding light on its invasiveness9
Chromosome-level genome of a leaf vegetableGlebionis coronariaprovides insights into the biosynthesis of monoterpenoids contributing to its special aroma9
Erratum to: Long-read metagenomics of multiple displacement amplified DNA of low-biomass human gut phageomes by SACRA pre-processing chimeric reads9
Unravelling the genomic features, phylogeny and genetic basis of tooth ontogenesis in Characiformes through analysis of four genomes9
A chromosomal-scale reference genome of the New World Screwworm,Cochliomyia hominivorax9
A high-quality genome assembly reveals adaptations underlying glossy, wax-coated leaves in the heat-tolerant wild raspberry Rubus leucanthus8
The genome of a globally invasive passerine, the common myna, Acridotheres tristis8
Near-complete telomere-to-telomere de novo genome assembly in Egyptian clover (Trifolium alexandrinum)7
Advancing apple genetics research: Malus coronaria and Malus ioensis genomes and a gene family-based pangenome of native North American apples7
Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade7
Propagation path of a flowering cherry (Cerasus × yedoensis) cultivar ‘Somei-Yoshino’ traced by somatic mutations7
Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome6
Chromosomal DNA sequences of the Pacific saury genome: versatile resources for fishery science and comparative biology6
Assessment of metagenomic workflows using a newly constructed human gut microbiome mock community6
Genomic variation across distribution of Micro-Tom, a model cultivar of tomato (Solanum lycopersicum)6
GINGER: an integrated method for high-accuracy prediction of gene structure in higher eukaryotes at the gene and exon level6
Functional landscape of genome-wide postzygotic somatic mutations between monozygotic twins6
A spinach genome assembly with remarkable completeness, and its use for rapid identification of candidate genes for agronomic traits5
Genome sequencing and analysis of two early-flowering cherry (Cerasus × kanzakura) varieties, ‘Kawazu-zakura’ and ‘Atami-zakura’5
A high-quality chromosome-level genome of wild Rosa rugosa5
Chromosome-level genome assembly of the yeast Lodderomyces beijingensis reveals the genetic nature of metabolic adaptations and identifies subtelomeres as hotspots for amplification of mating t5
Long-read metagenomics of multiple displacement amplified DNA of low-biomass human gut phageomes by SACRA pre-processing chimeric reads5
Genome-wide simple sequence repeat markers in potato: abundance, distribution, composition, and polymorphism5
Chromosome-level genome assembly of Gynostemma pentaphyllum provides insights into gypenoside biosynthesis5
The haplotype-phased genome assembly facilitated the deciphering of the bud dormancy-related QTLs in Prunus mume5
Integrating a genome-wide association study with transcriptomic data to predict candidate genes and favourable haplotypes influencing Brassica napus seed phytate5
A high-quality, haplotype-phased genome reconstruction reveals unexpected haplotype diversity in a pearl oyster5
A haplotype-resolved reference genome of a long-distance migratory bat, Pipistrellus nathusii (Keyserling & Blasius, 1839)4
Comparative transcriptome and mutation analyses of the pancreatic islets of a rat model of obese type 2 diabetes identifies a frequently distributed nonsense mutation in the lipocalin 2 gene4
Spatial and single-cell transcriptome analysis reveals changes in gene expression in response to drug perturbation in rat kidney4
Chromosome-scale genome assembly of Phyllanthus emblica L. “Yingyu”4
Characterization of proteogenomic signatures of differentiation of CD4+ T cell subsets3
Characterization of transcriptome changes in saline stress adaptation on Leuciscus merzbacheri using PacBio Iso-Seq and RNA-Seq3
Genome assembly of Genji firefly (Nipponoluciola cruciata) reveals novel luciferase-like luminescent proteins without peroxisome targeting signal3
Constitutive expression of the global regulator AbrB restores the growth defect of a genome-reduced Bacillus subtilis strain and improves its metabolite production3
Chromosome-level genome assembly and demographic history of Euryodendron excelsum in monotypic genus endemic to China3
Genome-resolved analysis of Serratia marcescens strain SMTT infers niche specialization as a hydrocarbon-degrader3
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