OOIR: Observatory of International Research

Papers

(The TQCC of Plant Biotechnology is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-05-01 to 2024-05-01.)

Article	Citations
Transient protein expression systems in plants and their applications	31
<i>In planta</i> particle bombardment (iPB): A new method for plant transformation and genome editing	30
Impact of abiotic stress on the regulation of cell wall biosynthesis in <i>Populus trichocarpa</i>	25
Molecular basis of cytoplasmic male sterility and fertility restoration in rice	23
Targeted genome editing in tetraploid potato through transient TALEN expression by <i>Agrobacterium</i> infection	22
Two aquaporins, SIP1;1 and PIP1;2, mediate water transport for pollen hydration in the <i>Arabidopsis</i> pistil	18
Creation of a potato mutant lacking the starch branching enzyme gene <i>StSBE3</i> that was generated by genome editing using the CRISPR/dMac3-Cas9 system	16
A method of transformation and current progress in transgenic research on cucumbers and <i>Cucurbita</i> species	15
A protocol for <i>Agrobacterium</i>-mediated transformation of Japanese cedar, Sugi (<i>Cryptomeria japonica</i> D. Don) using embryogenic tissue explants	12
A rapid method for detection of mutations induced by CRISPR/Cas9-based genome editing in common wheat	12
Somatic embryogenesis in artificially pollinated seed families of 2nd generation plus trees and cryopreservation of embryogenic tissue in <i>Cryptomeria japonica</i> D. Don (Sugi)	12
Phenylalanine ammonia-lyase and phenolic compounds are related to hybrid lethality in the cross <i>Nicotiana suaveolens</i>×<i>N. tabacum</i>	11
Genome editing in <i>PDS</i> genes of tomatoes by non-selection method and of <i>Nicotiana benthamiana</i> by one single guide RNA to edit two orthologs	11
An in vitro grafting method to quantify mechanical forces of adhering tissues	10
3-Phenyllactic acid, a root-promoting substance isolated from Bokashi fertilizer, exhibits synergistic effects with tryptophan	9
Visualization of Toyoura sand-grown plant roots by X-ray computer tomography	9
Hatching stimulation activity of steroidal glycoalkaloids toward the potato cyst nematode, <i>Globodera rostochiensis</i>	9
Efficient <i>Agrobacterium</i>-mediated genetic transformation method using hypocotyl explants of radish (<i>Raphanus sativus</i> L.)	8
Efficient genome editing and gene knockout in <i>Setaria viridis</i> with CRISPR/Cas9 directed gene editing by the non-homologous end-joining pathway	8
Exogenous ethanol treatment alleviates oxidative damage of <i>Arabidopsis thaliana</i> under conditions of high-light stress	8
Correlation between seed longevity and RNA integrity in the embryos of rice seeds	8
A glycogen synthase kinase 3-like kinase MpGSK regulates cell differentiation in <i>Marchantia polymorpha</i>	8
<i>Trans</i>-species small RNAs move long distances in a parasitic plant complex	8
Molecular cloning and biochemical characterization of isoflav-3-ene synthase, a key enzyme of the biosyntheses of (+)-pisatin and coumestrol	8
Characterization of 5-<i>O</i>-glucosyltransferase involved in anthocyanin biosynthesis in <i>Cyclamen purpurascens</i>	8

Micromanipulation of amyloplasts with optical tweezers in <i>Arabidopsis</i> stems	7
Competitive action between Brassinosteroid and tracheary element differentiation inhibitory factor in controlling xylem cell differentiation	7
A multimodal metabolomics approach using imaging mass spectrometry and liquid chromatography-tandem mass spectrometry for spatially characterizing monoterpene indole alkaloids secreted from roots	7
Additional betalain accumulation by genetic engineering leads to a novel flower color in lisianthus (<i>Eustoma grandiflorum</i>)	7
Embryogenic callus induction and <i>Agrobacterium</i>-mediated genetic transformation of ‘Shine Muscat’ grape	7
Stable and efficient transformation of apple	7
Novel assays to monitor gene expression and protein-protein interactions in rice using the bioluminescent protein, NanoLuc	7
Heterologous transformation of <i>Camelina sativa</i> with high-speed chimeric myosin XI-2 promotes plant growth and leads to increased seed yield	6
A novel strategy for promoting homoplasmic plastid transformant production using the barnase–barstar system	6
OsCERK2/OsRLK10, a homolog of OsCERK1, has a potential role for chitin-triggered immunity and arbuscular mycorrhizal symbiosis in rice	6
Plant regeneration and <i>Agrobacterium</i>-mediated genetic transformation systems in liliaceous ornamental plants	6
Enhancement of shoot regeneration by treatment with inhibitors of auxin biosynthesis and transport during callus induction in tissue culture of <i>Arabidopsis thaliana</i>	6
Effect of phosphate starvation on <i>CAPRICE</i> homolog gene expression in the root of <i>Arabidopsis</i>	6
Production of potato (<i>Solanum tuberosum</i>, L.) microtubers using plastic culture bags	6
Tissue culture protocols for gene transfer and editing in maize (<i>Zea mays</i> L.)	6
Spatial metabolomics using imaging mass spectrometry to identify the localization of asparaptine A in <i>Asparagus officinalis</i>	5
The boundary-expressed <i>EPIDERMAL PATTERNING FACTOR-LIKE2</i> gene encoding a signaling peptide promotes cotyledon growth during <i>Arabidopsis thaliana</i> embryogenesis	5
Structural features conserved in subclass of type II arabinogalactan	5
Database mining of plant peptide homologues	5
Inactivation of plant and animal viruses by proanthocyanidins from <i>Alpinia zerumbet</i> extract	5
Four-dimensional imaging with virtual reality to quantitatively explore jigsaw puzzle-like morphogenesis of <i>Arabidopsis</i> cotyledon pavement cells	5
Identification of genes involved in <i>Meloidogyne incognita</i>-induced gall formation processes in <i>Arabidopsis thaliana</i>	5
MassBase: A large-scaled depository of mass spectrometry datasets for metabolome analysis	5
Isolation and characterization of a novel glucosyltransferase involved in production of emodin-6-<i>O</i>-glucoside and rhaponticin in <i>Rheum palmatum</i>	4
Identification of two tobacco genes encoding MYB3R proteins with repressor function and showing cell cycle-regulated transcript accumulation	4
Fertile <i>Arabidopsis cyp704b1</i> mutant, defective in sporopollenin biosynthesis, has a normal pollen coat and lipidic organelles in the tapetum	4
Nucleoside derivatives of 5-methylcytosine suppress 5-azacytidine-induced reactivation of a silent transgene in suspension-cultured tobacco cells	4
Protocol for <i>Agrobacterium</i>-mediated transformation of tall fescue and future perspective on the application of genome editing	4
Overexpression of rice OsLEA5 relieves the deterioration in seed quality caused by high-temperature stress	4
In situ measurement of cell stiffness of Arabidopsis roots growing on a glass micropillar support by atomic force microscopy	4
Biochemical characterization of the jasmonic acid methyltransferase gene from wasabi (<i>Eutrema japonicum</i>)	4
Brassinosteroids are required for efficient root tip regeneration in <i>Arabidopsis</i>	4
Establishment of a genetic transformation system for <i>Codonopsis pilosula</i> callus	4
An Arabidopsis NAC domain transcriptional activator VND7 negatively regulates <i>VNI2</i> expression	4
Expression of the auxin biosynthetic genes <i>YUCCA1</i> and <i>YUCCA4</i> is dependent on the boundary regulators <i>CUP-SHAPED COTYLEDON</i> genes in the <i>	4
4-Phenylbutyric acid promotes plant regeneration as an auxin by being converted to phenylacetic acid via an IBR3-independent pathway	4
Root shape adaptation to mechanical stress derived from unidirectional vibrations in <i>Populus nigra</i>	4
Spatio-temporal kinematic analysis of shoot gravitropism in <i>Arabidopsis thaliana</i>	4
Comparative analysis of various root active promoters by evaluation of GUS expression in transgenic Arabidopsis	4
Recent advances in steroidal glycoalkaloid biosynthesis in the genus <i>Solanum</i>	4
Calcium signaling contributes to xylem vessel cell differentiation via post-transcriptional regulation of VND7 downstream events	4
A simple method for <i>in planta</i> tomato transformation by inoculating floral buds with a sticky <i>Agrobacterium tumefaciens</i> suspension	4
New insights into the intraspecific cytoplasmic DNA diversity, maternal lineages classification and conservation issues of Tunisian pearl millet landraces	4
Mutation of cysteine residues increases heterologous expression of peach expansin in the methylotrophic yeast <i>Pichia pastoris</i>	4
Metabolome analysis using multiple data mining approaches suggests luteolin biosynthesis in <i>Physcomitrella patens</i>	4
Integrated transcript and metabolite profiling reveals coordination between biomass size and nitrogen metabolism in <i>Arabidopsis</i> F<sub>1</sub> hybrids	4
Estimating the flexural rigidity of Arabidopsis inflorescence stems: Free-vibration test vs. three-point bending test	4