Microbes and Environments

Papers
(The median citation count of Microbes and Environments is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-06-01 to 2025-06-01.)
ArticleCitations
Size Distribution and Pathogenic Potential of Culturable Airborne <i>Clostridium</i> spp. in a Suburb of Toyama City, Japan40
Unique Rhizobial Communities Dominated by <i>Bradyrhizobium liaoningense</i> and <i>Bradyrhizobium ottawaense</i> were Found in Vegetable Soybean Nodules in Osaka Prefecture, J33
High Prevalence of <i>Pantoea</i> spp. in Microbiota Associated with the Sorghum Plant Bug <i>Stenotus rubrovittatus</i> (Heteroptera: Miridae)26
Light-driven Proton Pumps as a Potential Regulator for Carbon Fixation in Marine Diatoms23
A Potential Indicator Gene, <i>tetM</i>, to Assess Contamination by Antibiotic Resistance Genes in Greenhouses in South Korea18
Phenolic Acids Induce Nod Factor Production in <i>Lotus japonicus</i>–<i>Mesorhizobium</i> Symbiosis18
Population Distribution of Phosphate-solubilizing Microorganisms in Agricultural Soil18
Transcriptional Regulation of Methanol Dehydrogenases in the Methanotrophic Bacterium <i>Methylococcus capsulatus</i> Bath by Soluble and Insoluble Lanthanides18
Highly Reduced Complementary Genomes of Dual Bacterial Symbionts in the Mulberry Psyllid <i>Anomoneura mori</i>16
Vertical Distribution and Seasonal Patterns of <i>Candidatus</i> Nitrotoga in a Sub-Alpine Lake15
Exogenous Indole-3-Acetic Acid Induced Ethanol Tolerance in Phylogenetically Diverse Saccharomycetales Yeasts13
Metagenomic Analysis of Five Phylogenetically Distant Anammox Bacterial Enrichment Cultures13
Phylogeny and Physiological Diversity of Cold-adapted Anaerobic Bacteria Isolated from Rice Field Soil in Japan11
Biocontrol of <i>Phytophthora</i> Root and Stem Rot and Growth Promotion of Soybean Plants by the Rhizobacterium <i>Enterobacter pseudoroggenkampii</i> Strain GVv1 Isolated fro10
Global Distribution and Diversity of Marine Parmales10
Massive RNA Editing in Ascetosporean Mitochondria9
Diversity and Quantitative Detection of Clade I Type <i>nosZ</i> Denitrifiers in the Arabian Sea Oxygen Minimum Zone9
Modulation of Phytochemicals and Essential Trace Elements in Fruits of Different Tomato Cultivars by the Endophytic Fungus <i>Penicillium pinophilum</i> EU00138
Cultivation of Piezotolerant and Piezophilic Hyperthermophiles with a Newly Developed Constant High Pressure and Temperature Culturing and Monitoring System8
Two Distinct Enzymes Have Both Phytoene Desaturase and 3,4-Desaturase Activities Involved in Carotenoid Biosynthesis by the Extremely Halophilic Archaeon <i>Haloarcula japonica</i>8
Species-specific Microorganisms in Acid-tolerant <i>Chironomus</i> Larvae Reared in a Neutral pH Range under Laboratory Conditions: Single Dataset Analysis8
Metagenome-assembled Genomes of Six Novel Ammonia-oxidizing Archaea (AOA) from Agricultural Upland Soil8
Bioformulations Derived from <i>Enterobacter</i> sp. NRRU-N13 and Oligochitosan Alleviate Drought Stress in Thai Jasmine Rice (<i>Oryza sativa</i> L. var. KDML105)7
Diversity of <i>Candidatus</i> Patescibacteria in Activated Sludge Revealed by a Size-‍Fractionation Approach7
Isolation and Identification of Phosphate-solubilizing Bacteria in the Rhizosphere of <i>Robinia pseudoacacia</i> on the Loess Plateau and Verification of Phosphate Solubilization Capacity6
Accelerated Iron Corrosion by Microbial Consortia Enriched from Slime-like Precipitates from a Corroded Metal Apparatus Deployed in a Deep-sea Hydrothermal System6
Plant Growth-promoting Effects of Viable and Dead Spores of <i>Bacillus pumilus</i> TUAT1 on <i>Setaria viridis</i>5
Syntrophic Interaction between an Anoxygenic Photosynthetic Bacterium and a Tetrathionate-reducing Bacterium in Anaerobic Benzoate Degradation5
Effects of Different Types of Additional Fertilizers on Root-associated Microbes of Napa Cabbage Grown in an Andosol Field in Japan5
Phage Genes Induce Quorum Sensing Signal Release through Membrane Vesicle Formation5
Delayed Lysis Time at High Multiplicities of Particles in a Chlorovirus-<i>Chlorella</i> Interaction5
Species-specific Primer and Probe Sets for Detection of Syntrophic Long-chain Fatty Acid-degrading Bacteria in Anaerobic Digestion Using Quantitative PCR5
Environmental Variables Including Heavy Metals Significantly Shape the Soil Bacterial Community Structure in the Tatun Volcano Group, Northern Taiwan5
Differential Responses of Soil Ammonia-oxidizing Bacterial and Archaeal Communities to Land-use Changes in Zambia5
Analysis of the Bacterial Flora of Substrates Used for the Cultivation of <i>Agaricus bisporus</i>: Relationship between <i>Clostridia</i> and Yield5
Self-cloning of the Catalase Gene in Environmental Isolates Improves Their Colony-forming Abilities on Agar Media4
RNA Virosphere in a Marine Zooplankton Community in the Subtropical Western North Pacific4
Deep Subseafloor Biogeochemical Processes and Microbial Populations Potentially Associated with the 2011 Tohoku-oki Earthquake at the Japan Trench Accretionary Wedge (IODP Expedition 343)4
Polyethylene Biodegradation by an Artificial Bacterial Consortium: <i>Rhodococcus</i> as a Competitive Plastisphere Species4
Characterization of Lactic Acid Bacteria from Fermented Fish (<i>pla-paeng-daeng</i>) and Their Cholesterol-lowering and Immunomodulatory Effects4
The Significance of Mycoparasitism by <i>Streptomyces</i> sp. MBCN152-1 for Its Biocontrol Activity against <i>Alternaria brassicicola</i>4
Evaluation of Disease Suppressiveness of Soils in Croplands by Co-Cultivation of Pathogenic <i>Fusarium oxysporum</i> and Indigenous Soil Microorganisms4
Effects of Phosphate-solubilizing Bacteria on Soil Phosphorus Fractions and Supply to Maize Seedlings Grown in Lateritic Red Earths and Cinnamon Soils4
Identification of a Novel Gene Involved in Cell-to-cell Communication-induced Cell Death and eDNA Production in <i>Streptococcus mutans</i>4
Effects of Co-existing Heterotrophs on Physiology of and Nitrogen Metabolism in Autotrophic Nitrite-oxidizing <i>Candidatus</i> Nitrotoga4
A Fast and Easy Method to Co-extract DNA and RNA from an Environmental Microbial Sample3
Environmental Factors Affecting the Community of Methane-oxidizing Bacteria3
Mating Types of <i>Ustilago esculenta</i> Infecting <i>Zizania latifolia</i> Cultivars in Japan Are Biased towards MAT-2 and MAT-33
Microbial Community Structures and Methanogenic Functions in Wetland Peat Soils3
N<sub>2</sub>O Reduction by <i>Gemmatimonas aurantiaca</i> and Potential Involvement of <i>Gemmatimonadetes</i> Bacteria in N<sub>2</sub>O Reduction in 3
Bacterial Community of Water Yam (<i>Dioscorea alata</i> L.) cv. A-193
<i>Fusarium</i> Fungi Produce Nitrous Oxide (N<sub>2</sub>O) from Nitrite (NO<sub>2</sub><sup>–</sup>) in a Model Pot System Simulating the Soybean Rhiz3
Categorization of Bacteria That Leak from Activated Sludge to Secondary Treated Water: Year-round Observations3
Identification of 146 Metagenome-assembled Genomes from the Rumen Microbiome of Cattle in Japan3
A Minority Population of Non-dye-decolorizing <i>Bacillus subtilis</i> enhances the Azo Dye-decolorizing Activity of <i>Enterococcus faecalis</i>3
Microbial Community Structure of Mesophilic and Low-temperature Partial Nitrification-anammox Reactors: Distribution and Functional Roles of the Core Microbiome2
Simultaneous Nitrogen Removal and Plant Growth Promotion Using Salt-‍tolerant Denitrifying Bacteria in Agricultural Wastewater2
Gamma Ray-induced Mutations in <i>pyrEF</i> Genes in <i>Frankia casuarinae</i> Strain CcI32
Dynamics of the Microbial Community and Opportunistic Pathogens after Water Stagnation in the Premise Plumbing of a Building2
Is Habitat More Important than Phylogenetic Relatedness for Elucidating the Gut Bacterial Composition in Sister Lizard Species?2
Eukaryotic Microbial RNA Viruses—Acute or Persistent? Insights into Their Function in the Aquatic Ecosystem2
Relationship Between Rumen Microbial Composition and Fibrolytic Isozyme Activity During the Biodegradation of Rice Straw Powder Using Rumen Fluid2
Impact of Inoculations with Indigenous <i>Bradyrhizobium diazoefficiens</i> Isolates on Productivity and Competition with Indigenous Bradyrhizobia in Adzuki Bean (<i>Vigna angularis&2
A Simple and Effective Method for Solid Medium Cultivation of Strictly Hydrogen- and Sulfur-oxidizing Chemolithoautotrophs Predominant in Deep-‍sea Hydrothermal Fields2
Application of Genomic Epidemiology of Pathogens to Farmed Yellowtail Fish Mycobacteriosis in Kyushu, Japan2
A Novel Strain of the Cyanobacterial Growth-promoting Bacterium, <i>Rhodococcus</i> sp. AF2108, Enhances the Growth of <i>Synechococcus elongatus</i>2
Identification of Aerotaxis Receptor Proteins Involved in Host Plant Infection by <i>Pseudomonas syringae</i> pv. <i>tabaci</i> 66051
Evaluation of Soil Antagonism against the White Root Rot Fungus <i>Rosellinia necatrix</i> and Pathogen Mycosphere Communities in Biochar-amended Soil1
Domain-level Identification of Single Prokaryotic Cells by Optical Photothermal Infrared Spectroscopy1
DiGAlign: Versatile and Interactive Visualization of Sequence Alignment for Comparative Genomics1
The Discovery of Membrane Vesicle Biogenesis in the Polyhydroxybutyrate-non-producing Mutant Strain of <i>Cupriavidus necator</i> H161
Isolation of a Moderately Acidophilic <i>Nitrobacter</i> from a Nitrifying Community Supplied with Urea1
Novel Insights into Microbial Behavior Gleaned Using Microfluidics1
High-resolution Microbiome Analyses of Nine Psyllid Species of the Family Triozidae Identified Previously Unrecognized but Major Bacterial Populations, including <i>Liberibacter</i> and &l1
Transcriptome and Deletion Mutant Analyses Revealed that an RpoH Family Sigma Factor Is Essential for Photosystem Production in <i>Roseateles depolymerans</i> under Carbon Starvation1
Successful Isolation of Diverse <i>Verrucomicrobiota</i> Strains through the Duckweed-Microbes Co-cultivation Method1
Community Structure and Predicted Functions of Actively Growing Bacteria Responsive to Released Coral Mucus in Surrounding Seawater1
Occurrence and Diversity of <i>Listeria monocytogenes</i> Isolated from Two Pig Manure Treatment Plants in France1
Ferrihydrite Addition Activated <i>Geobacteraceae</i>, the Most Abundant Iron-reducing Diazotrophs, and Suppressed Methanogenesis by Heterogeneous Methanogens in Xylan-amended Paddy Soil M1
Metagenomic Insights into Ecophysiology of <i>Zetaproteobacteria</i> and <i>Gammaproteobacteria</i> in Shallow Zones within Deep-sea Massive Sulfide Deposits1
Weekly Observations of Estuarine Microbial Assemblages during Summer in the Inner Part of Ariake Bay, Japan; Microbial Water-sediment Coupling in Turbid Shallow Waters1
Diversity in Infection Specificity between the Bloom-forming Microalga <i>Heterosigma akashiwo</i> and Its dsDNA Virus, Heterosigma akashiwo Virus1
16S rRNA Gene Sequencing of Six Psyllid Species of the Family Carsidaridae Identified Various Bacteria Including <i>Symbiopectobacterium</i>1
Reactive Sulfur Species Produced by Cystathionine γ-lyase Function in the Establishment of <i>Mesorhizobium loti</i>–<i>Lotus japonicus</i> Symbiosis1
Quest for Nitrous Oxide-reducing Bacteria Present in an Anammox Biofilm Fed with Nitrous Oxide1
Does Rhizobial Inoculation Change the Microbial Community in Field Soils? A‍ ‍Comparison with Agricultural Land-use Changes1
Formation of Biogenic Manganese Oxide Nodules on Hyphae of a New Fungal Isolate of <i>Periconia</i> That Immobilizes Aqueous Copper1
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