Microbes and Environments

Papers
(The median citation count of Microbes and Environments is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-05-01 to 2026-05-01.)
ArticleCitations
Genome-wide Characterization of Non-shared Sequences among Amphora-shaped Giant Viruses54
Size Distribution and Pathogenic Potential of Culturable Airborne <i>Clostridium</i> spp. in a Suburb of Toyama City, Japan17
Unique Rhizobial Communities Dominated by <i>Bradyrhizobium liaoningense</i> and <i>Bradyrhizobium ottawaense</i> were Found in Vegetable Soybean Nodules in Osaka Prefecture, J15
Risk Evaluation of <i>Verticillium</i> Wilt on Cabbage Grown in Soil Reused from Sediment Basins14
Transcriptional Regulation of Methanol Dehydrogenases in the Methanotrophic Bacterium <i>Methylococcus capsulatus</i> Bath by Soluble and Insoluble Lanthanides13
Light-driven Proton Pumps as a Potential Regulator for Carbon Fixation in Marine Diatoms13
Restoration of Nitrate Respiration in <i>Pseudomonas aeruginosa</i> under Growth Limitations12
Nitrogen-fixing Ability of a Thermophilic Sulfate-reducing Bacterium in the Genus <i>Thermodesulfovibrio</i> Isolated from a Terrestrial Hot Spring in Japan12
High Prevalence of <i>Pantoea</i> spp. in Microbiota Associated with the Sorghum Plant Bug <i>Stenotus rubrovittatus</i> (Heteroptera: Miridae)12
Investigation of Microbial Community Shifts under the Mizumoto Japanese Traditional Sake Brewing Process Using Chemical Analyses and High-throughput Sequencing11
Highly Reduced Complementary Genomes of Dual Bacterial Symbionts in the Mulberry Psyllid <i>Anomoneura mori</i>11
A Potential Indicator Gene, <i>tetM</i>, to Assess Contamination by Antibiotic Resistance Genes in Greenhouses in South Korea11
Vertical Distribution and Seasonal Patterns of <i>Candidatus</i> Nitrotoga in a Sub-Alpine Lake10
Regulation of Root Nodule Symbiosis by Soybean <i>Rj</i> Genotypes and Rhizobial Effectors10
Optimal Phosphate Concentration for Growth and Normal Functioning of Marine Anammox Bacteria, <i>Candidatus</i> Scalindua sp.10
Phylogeny and Physiological Diversity of Cold-adapted Anaerobic Bacteria Isolated from Rice Field Soil in Japan9
A Rechargeable Biomineral Induced by the Sulfate-reducing Bacterium <i>Nitratidesulfovibrio</i> sp. HK-II7
Biocontrol of <i>Phytophthora</i> Root and Stem Rot and Growth Promotion of Soybean Plants by the Rhizobacterium <i>Enterobacter pseudoroggenkampii</i> Strain GVv1 Isolated fro7
Nitrifying Communities in Biological Nitrogen Removal Processes at Tropical Municipal Wastewater Treatment Plants7
Genetic Diversity of Endospore-forming Nitrogen-fixing Bacteria and Their Future Application as Biofertilizers in the Central Dry Zone of Myanmar7
Diversity and Quantitative Detection of Clade I Type <i>nosZ</i> Denitrifiers in the Arabian Sea Oxygen Minimum Zone6
Massive RNA Editing in Ascetosporean Mitochondria6
Expanding the Eco-collection of Methane-oxidizing Bacteria Inhabiting Rice Roots: Cultivation, Isolation, and Genomic Characterization of Isolates6
Temperature Effects on Symptom Expression of Lettuce Black Root Rot Caused by <i>Berkeleyomyces rouxiae</i>6
Global Distribution and Diversity of Marine Parmales6
Improvements in the Duckweed-Microbe Co-cultivation Method for the Stable and Efficient Isolation of Rarely Cultivated Bacteria Using Microfilter Membranes5
Amplicon Analysis of Dictean Cave Microbial Communities and Essential Oils as a Mild Biocide5
Physiological and Genomic Characterization of Oligotrophic <i>Nitrobacter</i> Isolated from a Forest Soil in Japan5
Cultivation of Piezotolerant and Piezophilic Hyperthermophiles with a Newly Developed Constant High Pressure and Temperature Culturing and Monitoring System5
Analysis of the Bacterial Flora of Substrates Used for the Cultivation of <i>Agaricus bisporus</i>: Relationship between <i>Clostridia</i> and Yield4
Species-specific Primer and Probe Sets for Detection of Syntrophic Long-chain Fatty Acid-degrading Bacteria in Anaerobic Digestion Using Quantitative PCR4
Two Distinct Enzymes Have Both Phytoene Desaturase and 3,4-Desaturase Activities Involved in Carotenoid Biosynthesis by the Extremely Halophilic Archaeon <i>Haloarcula japonica</i>4
Isolation and Identification of Phosphate-solubilizing Bacteria in the Rhizosphere of <i>Robinia pseudoacacia</i> on the Loess Plateau and Verification of Phosphate Solubilization Capacity4
Syntrophic Interaction between an Anoxygenic Photosynthetic Bacterium and a Tetrathionate-reducing Bacterium in Anaerobic Benzoate Degradation4
Distribution and Characterization of the Novel Quorum-quenching Enzyme AiiB in <i>Priestia megaterium</i> Isolated from a Natural Environment4
Species-specific Microorganisms in Acid-tolerant <i>Chironomus</i> Larvae Reared in a Neutral pH Range under Laboratory Conditions: Single Dataset Analysis4
Accelerated Iron Corrosion by Microbial Consortia Enriched from Slime-like Precipitates from a Corroded Metal Apparatus Deployed in a Deep-sea Hydrothermal System4
Characterization of Lactic Acid Bacteria from Fermented Fish (<i>pla-paeng-daeng</i>) and Their Cholesterol-lowering and Immunomodulatory Effects4
Differential Responses of Soil Ammonia-oxidizing Bacterial and Archaeal Communities to Land-use Changes in Zambia4
Bioformulations Derived from <i>Enterobacter</i> sp. NRRU-N13 and Oligochitosan Alleviate Drought Stress in Thai Jasmine Rice (<i>Oryza sativa</i> L. var. KDML105)4
<i>Legionella</i> Survives and Elongates in Algal Consortia Containing Bacteria in Alkaline Oligotrophic Conditions3
Metabolic Potential and Microbial Diversity of Late Archean to Early Proterozoic Ocean Analog Hot Springs of Japan3
Effects of Co-existing Heterotrophs on Physiology of and Nitrogen Metabolism in Autotrophic Nitrite-oxidizing <i>Candidatus</i> Nitrotoga3
Identification of a Novel Gene Involved in Cell-to-cell Communication-induced Cell Death and eDNA Production in <i>Streptococcus mutans</i>3
Self-cloning of the Catalase Gene in Environmental Isolates Improves Their Colony-forming Abilities on Agar Media3
Deep Subseafloor Biogeochemical Processes and Microbial Populations Potentially Associated with the 2011 Tohoku-oki Earthquake at the Japan Trench Accretionary Wedge (IODP Expedition 343)3
Effects of Phosphate-solubilizing Bacteria on Soil Phosphorus Fractions and Supply to Maize Seedlings Grown in Lateritic Red Earths and Cinnamon Soils3
Polyethylene Biodegradation by an Artificial Bacterial Consortium: <i>Rhodococcus</i> as a Competitive Plastisphere Species3
A Fast and Easy Method to Co-extract DNA and RNA from an Environmental Microbial Sample3
<i>Fusarium</i> Fungi Produce Nitrous Oxide (N<sub>2</sub>O) from Nitrite (NO<sub>2</sub><sup>–</sup>) in a Model Pot System Simulating the Soybean Rhiz3
Mating Types of <i>Ustilago esculenta</i> Infecting <i>Zizania latifolia</i> Cultivars in Japan Are Biased towards MAT-2 and MAT-32
Ammonia Oxidation Property of Soils on the Glacier Foreland of Austre Brøggerbreen, Svalbard: Response to Open-top Chamber Experiments2
A Simple and Effective Method for Solid Medium Cultivation of Strictly Hydrogen- and Sulfur-oxidizing Chemolithoautotrophs Predominant in Deep-‍sea Hydrothermal Fields2
Promoter Sequences Do Not Solely Govern <i>nosZ</i> Expression Differences between <i>Bradyrhizobium ottawaense</i> and <i>B. diazoefficiens</i>2
Microbiome Associated with <i>Polypedilum</i> sp. (Diptera; Chironomidae), a Midge Adapted to an Extremely Acidic Environment2
Microbial Community Structure of Mesophilic and Low-temperature Partial Nitrification-anammox Reactors: Distribution and Functional Roles of the Core Microbiome2
Categorization of Bacteria That Leak from Activated Sludge to Secondary Treated Water: Year-round Observations2
Effects of Soil Moisture Content and <i>Rj</i> Genotype Differences on Soybean Productivity and Soybean-nodulating Bradyrhizobial Occupancy2
Application of Genomic Epidemiology of Pathogens to Farmed Yellowtail Fish Mycobacteriosis in Kyushu, Japan2
Does Rhizobial Inoculation Change the Microbial Community in Field Soils? A‍ ‍Comparison with Agricultural Land-use Changes1
Reactive Sulfur Species Produced by Cystathionine γ-lyase Function in the Establishment of <i>Mesorhizobium loti</i>–<i>Lotus japonicus</i> Symbiosis1
Formation of Biogenic Manganese Oxide Nodules on Hyphae of a New Fungal Isolate of <i>Periconia</i> That Immobilizes Aqueous Copper1
Quest for Nitrous Oxide-reducing Bacteria Present in an Anammox Biofilm Fed with Nitrous Oxide1
Relationship Between Rumen Microbial Composition and Fibrolytic Isozyme Activity During the Biodegradation of Rice Straw Powder Using Rumen Fluid1
Screening of <i>Bradyrhizobium ottawaense</i> with High N<sub>2</sub>O-reducing Activity from Soybean Nodules in Japan1
Isolation of a Moderately Acidophilic <i>Nitrobacter</i> from a Nitrifying Community Supplied with Urea1
Unipolar Polysaccharide-mediated Attachment of the N<sub>2</sub>O-reducing bacterium <i>Bradyrhizobium ottawaense</i> SG09 to Plant Roots1
Successful Isolation of Diverse <i>Verrucomicrobiota</i> Strains through the Duckweed-Microbes Co-cultivation Method1
Metagenomic Insights into Ecophysiology of <i>Zetaproteobacteria</i> and <i>Gammaproteobacteria</i> in Shallow Zones within Deep-sea Massive Sulfide Deposits1
The Discovery of Membrane Vesicle Biogenesis in the Polyhydroxybutyrate-non-producing Mutant Strain of <i>Cupriavidus necator</i> H161
Novel Insights into Microbial Behavior Gleaned Using Microfluidics1
Impact of Inoculations with Indigenous <i>Bradyrhizobium diazoefficiens</i> Isolates on Productivity and Competition with Indigenous Bradyrhizobia in Adzuki Bean (<i>Vigna angularis&1
Characterization of <i>Frankia casuarinae</i> Mutants Defective in Vesicle Envelope Development1
Community Structure and Predicted Functions of Actively Growing Bacteria Responsive to Released Coral Mucus in Surrounding Seawater1
Ferrihydrite Addition Activated <i>Geobacteraceae</i>, the Most Abundant Iron-reducing Diazotrophs, and Suppressed Methanogenesis by Heterogeneous Methanogens in Xylan-amended Paddy Soil M1
Genome Plasticity Depends on Positions both Inside and Outside of the Symbiosis Island of <i>Bradyrhizobium diazoefficiens</i>1
The Type III Effector NopM from <i>Bradyrhizobium elkanii</i> USDA61 Induces a Hypersensitive Response in <i>Lotus japonicus</i> Root Nodules1
Marked Genome Reduction Driven by a Parasitic Lifestyle: Two Complete Genomes of Endosymbiotic Bacteria Possibly Hosted by a Dinoflagellate1
DiGAlign: Versatile and Interactive Visualization of Sequence Alignment for Comparative Genomics1
Gamma Ray-induced Mutations in <i>pyrEF</i> Genes in <i>Frankia casuarinae</i> Strain CcI31
A Novel Strain of the Cyanobacterial Growth-promoting Bacterium, <i>Rhodococcus</i> sp. AF2108, Enhances the Growth of <i>Synechococcus elongatus</i>1
Isolation of a <i>Tissierellaceae</i> Bacterium Exhibiting a High Reduction Potential for Insoluble Indigo Dyes1
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