Breeding Science

Article	Citations
<i>Flowering Date1</i>, a major photoperiod sensitivity gene in adzuki bean, is a soybean floral repressor <i>E1</i> ortholog	34
Cloning and functional study of <i>GmRPI2</i>, which is the critical gene of photosynthesis in soybean	33
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Allyl isothiocyanate and 6-(methylsulfinyl) hexyl isothiocyanate contents vary among wild and cultivated wasabi (<i>Eutrema japonium</i>)	12
Development and characterization of near-isogenic lines for brown planthopper resistance genes in the genetic background of <i>japonica</i> rice ‘Sagabiyori’	10
A target cultivar-specific identification system based on the chromatographic printed array strip method for eight prominent Japanese citrus cultivars	9
DNAMarkMaker: streamlining ARMS and CAPS marker development from resequencing data with NGS short reads	9
Development of pyramided lines carrying brown planthopper resistance genes in the genetic background of Indica Group rice (<i>Oryza sativa</i> L.) variety ‘IR64’	8
Characterization of a novel mutant with inhibition of storage root formation in sweet potato	8
Genetic variation and genetic control of intraspikelet differences in grain weight and seed dormancy in wild and domesticated emmer wheats	8
The origin and distribution of ‘Kokubu’-type splice-site mutations of the <i>MLO</i> genes in tobacco varieties	7
Characterization of QTLs for diameter in panicle neck and substitution mapping of <i>qDPN5/qVBN5.2</i> and <i>qVBN6</i> in rice (<i>Oryza sativa</i> L.)	7
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The induced mutant allele <i>flo4-303</i> confers floury characteristics on the japonica rice cultivar ‘Hoshinoko’	6
<i>De novo</i> genome assembly of the partial homozygous dihaploid potato identified PVY resistance gene (<i>Ry<sub>chc</sub></i>) derived from <i>Solanum cha	6
Interaction between genetic regions responsible for the starch properties in non-glutinous rice varieties in Hokkaido, Japan	6
A novel QTL associated with tolerance to cold-induced seed cracking in the soybean cultivar Toyomizuki	6
A unique genetic variation with respect to blast (<i>Pyricularia oryzae</i> Cavara) resistance in rice (<i>Oryza sativa</i> L.) varieties in Vietnam	6
Development of 12 sets of chromosome segment substitution lines that enhance allele mining in Asian cultivated rice	5
Assessing streetscape greenery with deep neural network using Google Street View	5
<i>S</i> haplotype collection in Brassicaceae crops—an updated list of <i>S</i> haplotypes	5
Announcements	4
Form follows function in Triticeae inflorescences	4
Overcoming cross-incompatibility in genus <i>Arachis</i> via <i>in situ</i> embryo rescue	4

Diversity of Na<sup>+</sup> allocation in salt-tolerant species of the genus <i>Vigna</i>	4
Estimation of pollen dispersal distance in Job’s tears (<i>Coix lacryma-jobi</i> L.) by using red leaf sheath as a morphological marker	4
Selection of chromosome segment substitution lines with reduced grain chalkiness without yield penalty in rice	4
ITRAQ-based quantitative proteomic analysis of <i>japonica</i> rice seedling during cold stress	3
Whole-genome resequencing of Japanese large-sized tomato cultivars provides insights into the history of modern breeding	3
Loss of <i>GW5</i> function is involved in the unique grain shape of “Tanpo”, a Japanese landrace rice	3
3D modeling and reconstruction of plants and trees: A cross-cutting review across computer graphics, vision, and plant phenotyping	3
Genomic diversity of the Japanese wheat core collection and selection of alleles for agronomic traits in the breeding process	3
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Genome-wide association analysis was used to discover genes related to soybean grain weight per plant and 100-grain weight	3
Identification and characterization of stable QTLs for vascular bundle number at the panicle neck in rice (<i>Oryza sativa</i> L.)	3
Mutant <i>Tof11</i> alleles are highly accumulated in early planting-adaptable Japanese summer type soybeans	3
Breeding of a new malting barley variety ‘Satuiku 5 go’ for Hokkaido exhibiting improved grain yield and malting quality	3
Model-based plant phenomics on morphological traits using morphometric descriptors	2
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Fine mapping of <i>Rf5</i> region for a sorghum fertility restorer gene and microsynteny analysis across grass species	2
Genome-wide association study of ear tip barrenness in waxy maize	2
A large deletion within intron 20 sequence of single-copy <i>PolA1</i> gene as a useful marker for the speciation in <i>Oryza</i> AA-genome species	2
Low asparagine wheat: Europe’s first field trial of genome edited wheat amid rapidly changing regulations on acrylamide in food and genome editing of crops	2
High-throughput field crop phenotyping: current status and challenges	2
Diversity of salt tolerance in <i>Vigna nakashimae</i>, wild related species of the azuki bean (<i>Vigna angularis</i>)	2
Mutations within the miR172 target site of wheat <i>AP2</i> homoeologs regulate lodicule size and rachis internode length	2
Narrowing down a major QTL region reveals <i>Phytochrome E</i> (<i>PHYE</i>) as the candidate gene controlling flowering time in mungbean (<i>Vigna radiata</i>)	2
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Development of a multicriteria decision-making model for evaluating hybrid offspring in the sweetpotato (<i>Ipomoea batatas</i> L.) breeding process	2
Polyploid QTL-seq revealed multiple QTLs controlling steamed tuber texture and starch gelatinization temperature in sweetpotato	2
Genetic mapping and quantitative trait loci analysis for pistillate flowers per node and multi-pistillate flower traits in the F<sub>2</sub> cucumber population	2
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Near-isogenic lines for resistance to brown planthopper with the genetic background of Indica Group elite rice (<i>Oryza sativa</i> L.) variety ‘IR64’	1
V-primer: software for the efficient design of genome-wide InDel and SNP markers from multi-sample variant call format (VCF) genotyping data	1
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Contribution of the grain size QTL <i>GS3</i> to yield properties and physiological nitrogen-use efficiency in the large-grain rice cultivar ‘Akita 63’	1
Allelic variation of a clubroot resistance gene (<i>Crr1a</i>) in Japanese cultivars of Chinese cabbage (<i>Brassica rapa</i> L.)	1
Root nodule organogenesis: a unique lateral organogenesis in legumes	1
Understanding plant development for plant breeding	1
Development of ‘Poroshiri’, a chip processing potato variety with golden cyst nematode and common scab resistance	1
Detection of QTLs regulating the second internode length in rice dwarf mutant <i>d1</i>	1
Development of a plant conveyance system using an AGV and a self-designed plant-handling device: A case study of DIY plant phenotyping	1
Comparative analyses of <i>Stvb</i>-allelic genes reveal <i>japonica</i> specificity of rice stripe resistance in <i>Oryza sativa</i>	1
Development of genomic and genetic resources facilitating molecular genetic studies on untapped Myanmar rice germplasms	1
Genome-wide identification and salt stress expression analysis of the PLATZ transcription factor genes in <i>Betula platyphylla</i>	1
Polyploid QTL-seq identified QTLs controlling potato flesh color and tuber starch phosphorus content in a plexity-dependent manner	1
Whole-genome sequence analysis of mutations in rice plants regenerated from zygotes, mature embryos, and immature embryos	1
Chromosome-level assembly of <i>Cucumis sativus</i> cv. ‘Tokiwa’ as a reference genome of Japanese cucumber	1
Breeding of a promising isogenic line of rice (<i>Oryza sativa</i> L.) variety ‘Koshihikari’ with low cadmium and brown spot (<i>Bipolaris oryzae</i>) resistance	1
Mutagenic effects of nitrogen protoxide and oryzalin on “41 B” and “Fercal” grapevine rootstocks seedlings	1
Evolution of sex in crops: recurrent scrap and rebuild	1
Effects of <i>SpsNAC042</i> transgenic <i>Populus hopeiensis</i> on root development, leaf morphology and stress resistance	1
<i>Psy-E1</i> derived from <i>Thinopyrum ponticum</i> contributes strong yellowness to durum wheat but may cause yield loss in Japan	0

Two dominant genes in barley (<i>Hordeum vulgare</i> L.) complementarily encode perfect resistance to <i>Japanese soil-borne wheat mosaic virus</i>	0
Genomic markers analysis associated with resistance to <i>Alternaria alternata</i> (fr.) keissler—tomato pathotype, <i>Solanum lycopersicum</i> L.	0
Comparative transcriptome profiling reveals the mechanism of increasing lysine and tryptophan content through pyramiding <i>opaque2</i>, <i>opaque16</i> and <i>waxy1</	0
Cas12a and MAD7, genome editing tools for breeding	0
Histological studies on the relationship between the low seed set and abnormal embryo sacs in sweet potato, <i>Ipomoea batatas</i> (L.) Lam.	0
Studies of potato resistance to <i>Globodera rostochiensis</i> revealed novel alleles for 57R marker	0
Global regulatory trends of genome editing technology in agriculture and food	0
Identification of a unique allele in the quantitative trait locus for crown root number in <i>japonica</i> rice from Japan using genome-wide association studies	0
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Designing rice panicle architecture via developmental regulatory genes	0
Hybridization with <i>Fagopyrum cymosum</i> Meisn. as a way to make cultivated Tartary buckwheat (<i>F. tataricum</i> Gaertn.) with grain characteristics typical for common buc	0
Genetic resources and pangenome analysis of barley	0
Seed management using NGS technology to rapidly eliminate a deleterious allele from rice breeder seeds	0
Identification of a major QTL conferring resistance to <i>wheat yellow mosaic virus</i> derived from the winter wheat ‘Hokkai 240’ on chromosome 2AS	0
Development of male sterile lines of CMS chilies (<i>Capsicum annuum</i> L.) from F<sub>1</sub> hybrids	0
Induction of 2n pollen with colchicine during microsporogenesis in <i>Phalaenopsis</i>	0
Automatic detection of alien plant species in action camera images using the chopped picture method and the potential of citizen science	0
Unlocking the potential of genetic resources in the Pangenome era	0
Chromatographic printed array strip (C-PAS) method for cultivar-specific identification of sweetpotato cultivars ‘Beniharuka’ and ‘Fukumurasaki’	0
NARO historical phenotype dataset from rice breeding	0
Scarless genome editing technology and its application to crop improvement	0
Roles of microRNAs and histone modifications in enhancing stress tolerance in soybean and their applications in molecular breeding	0
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Exploring the landscape of public attitudes towards gene-edited foods in Japan	0
A genome-wide association study using Myanmar <i>indica</i> diversity panel reveals a significant genomic region associated with heading date in rice	0
Melon diversity on the Silk Road by molecular phylogenetic analysis in Kazakhstan melons	0
Allelic variation and genetic diversity of HMW glutenin subunits in Chinese wheat (<i>Triticum aestivum</i> L.) landraces and commercial cultivars	0
Improvement of preharvest sprouting resistance with <i>MOTHER OF FT AND TFL 1</i> + mutated <i>ABA 8ʹ-hydroxylase</i> in white-seeded durum wheat	0
Screening corn hybrids for early-stage drought stress tolerance using SPAR phenotyping platform	0
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Development of a high-throughput field phenotyping rover optimized for size-limited breeding fields as open-source hardware	0
All-around 3D plant modeling system using multiple images and its composition	0
Seed abortion caused by the combination of two duplicate genes in the progeny from the cross between <i>Oryza sativa</i> and <i>Oryza meridionalis</i>	0
Transferring of clubroot-resistant locus <i>CRd</i> from Chinese cabbage (<i>Brassica rapa</i>) to canola (<i>Brassica napus</i>) through interspecific hybridizatio	0
Resistance haplotypes to green rice leafhopper (<i>Nephotettix cincticeps</i> Uhler) estimated in genome-wide association study in Myanmar <i>indica</i> rice landraces	0
Allelic variations of <i>Vrn-1</i> and <i>Ppd-1</i> genes in Japanese wheat varieties reveal the genotype-environment interaction for heading time	0
Diversity of tomato leaf form provides novel insights into breeding	0
Development of diagnostic molecular markers for marker-assisted breeding against bacterial wilt in tomato	0
Current and future pangenomic research in cucurbit crops	0
Elucidation of genetic variation and population structure of melon genetic resources in the NARO Genebank, and construction of the World Melon Core Collection	0
Development and chromosomal characterization of interspecific hybrids between common buckwheat (<i>Fagopyrum esculentum</i>) and a related perennial species (<i>F. cymosum</i>)	0
Genetic basis controlling rice plant architecture and its modification for breeding	0
An NGS approach for the identification of precise homoeologous recombination sites between A and C genomes in <i>Brassica</i> genus	0
Novel breeding resources for the underutilised legume, lablab, based on a pangenome approach	0
<i>Colletotrichum orbiculare</i> strains distributed in Japan: race identification and evaluation of virulence to cucurbits	0
Phenotyping and a genome-wide association study of elite lines of pearl millet	0
Domestication of azuki bean and soybean in Japan: From the insight of archeological and molecular evidence	0
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GenoSee: a novel visualization tool for graphical genotypes	0
Wild and cultivated allele effects on rice phenotypic traits in reciprocal backcross populations between <i>Oryza rufipogon</i> and two cultivars, <i>O. sativa</i> Nipponbare a	0
Usage of wild <i>Oryza</i> germplasms for breeding in pan-genomics era	0
Taxonomic history, morphology, evolution, gene pool and stress tolerances of azuki bean and its related wild <i>Vigna</i> genetic resources	0
Molecular-based race classification of <i>Pyrenophora tritici-repentis</i> causing tan spot of wheat in Japan	0
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Genomic traces of Japanese malting barley breeding in two modern high-quality cultivars, ‘Sukai Golden’ and ‘Sachiho Golden’	0
<i>Wheat yellow mosaic virus</i> resistant line, ‘Kitami-94’, developed by introgression of two resistance genes from the cultivar ‘Madsen’	0
Recent applications of metabolomics in plant breeding	0
Development of SNP genotyping assays for heading date in rice	0
Seedless formation of a landrace ‘Sanenashi’ (<i>Pyrus</i> L.) collected from Northern Tohoku, Japan	0
Genetic control of morphological traits useful for improving sorghum	0
Genetic dissection of a reduced seed-shattering trait acquired in rice domestication	0
Quantitative trait locus (QTL) analysis and fine-mapping for <i>Fusarium oxysporum</i> disease resistance in <i>Raphanus sativus</i> using GRAS-Di technology	0
Genome-wide association mapping for early maturity in kintoki bean (<i>Phaseolus vulgaris</i> L.)	0
Comparative QTL mapping for male sterility of cultivated strawberry (<i>Fragaria</i> × <i>ananassa</i> Duch.) using different reference genome sequences	0
Identification of resistance to <i>Fusarium</i> head blight and molecular cytogenetics of interspecific derivatives between wheat and <i>Psathyrostachys huashanica</i>	0
Possibility of genome editing for melon breeding	0
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The impact of telomere-to-telomere genome assembly in the plant pan-genomics era	0
A new cultivar ‘Hisui no Kaori’ opens up a fragrant type of lettuce (<i>Lactuca sativa</i> L.)	0
Genomics unlocks the potential of genetic resources for citrus breeding	0
Classification of Southeast Asian mints (<i>Mentha</i> spp.) based on simple sequence repeat markers	0
Development of a laboratory test using stem cuttings to measure resistance to foot rot disease caused by <i>Diaporthe destruens</i> in sweetpotato	0
Quantitative trait loci (QTL) for low temperature tolerance at the young microspore stage in rice (<i>Oryza sativa</i> L.) in Australian breeding material	0
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Accelerating the development of genome-edited crops and the establishment of utilization infrastructure	0
Substitution mapping and characterization of brown planthopper resistance genes from traditional rice cultivar ‘Rathu Heenati’ (<i>Oryza sativa</i> L.)	0
Identification of a candidate rice blast resistance gene, <i>Pior4</i>(t), in an introgression line of <i>Oryza rufipogon</i> using CRISPR/Cas9-mediated genome editing	0
Single candidate gene for salt tolerance of <i>Vigna nakashimae</i> (Ohwi) Ohwi & Ohashi identified by QTL mapping, whole genome sequencing and triplicated RNA-seq analyses	0
Screening <i>Brassica rapa</i> for broad-spectrum resistance to Turnip mosaic virus	0

Genome editing of <i>DWARF</i> and <i>SELF-PRUNING</i> rapidly confers traits suitable for plant factories while retaining useful traits in tomato	0
Detection and validation of QTLs for green stem disorder of soybean (<i>Glycine max</i> (L.) Merr.)	0
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Improving the efficiency of plant root system phenotyping through digitization and automation	0
Developing core marker sets for effective genomic-assisted selection in wheat and barley breeding programs	0
Effects of dwarfing allele <i>sd1-d</i> originating from ‘Dee-geo-woo-gen’ and its tall alleles <i>SD1-in</i> and <i>SD1-ja</i> on morphological characteristics con	0
Digital phenotyping and data analysis for plant breeding	0
Identification of <i>An7</i> as a positive awn regulator from two wild rice species	0
Molecular mechanism of internode elongation in rice	0
THB1, a putative transmembrane protein that causes hybrid breakdown in rice	0