Cell Death and Differentiation

Papers
(The TQCC of Cell Death and Differentiation is 24. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-05-01 to 2024-05-01.)
ArticleCitations
COVID-19 vaccines: where we stand and challenges ahead601
Cell cycle regulation: p53-p21-RB signaling320
Cellular degradation systems in ferroptosis290
Loss of ferroportin induces memory impairment by promoting ferroptosis in Alzheimer’s disease284
Molecular mechanisms of cell death in neurological diseases281
The multifaceted role of ferroptosis in liver disease231
An aberrant STAT pathway is central to COVID-19215
p53 in ferroptosis regulation: the new weapon for the old guardian202
Ubiquitin signalling in neurodegeneration: mechanisms and therapeutic opportunities202
Patients with COVID-19: in the dark-NETs of neutrophils184
Expansion of myeloid-derived suppressor cells in patients with severe coronavirus disease (COVID-19)184
Lactate promotes macrophage HMGB1 lactylation, acetylation, and exosomal release in polymicrobial sepsis174
Ubiquitin signaling in cell cycle control and tumorigenesis151
Ubiquitination in the regulation of inflammatory cell death and cancer149
Organelle-specific regulation of ferroptosis148
Ferroptotic pores induce Ca2+ fluxes and ESCRT-III activation to modulate cell death kinetics140
Specific expression and functions of circular RNAs128
Branched-chain amino acid aminotransferase 2 regulates ferroptotic cell death in cancer cells117
SARS-CoV-2 spike protein dictates syncytium-mediated lymphocyte elimination112
Oxygenated phosphatidylethanolamine navigates phagocytosis of ferroptotic cells by interacting with TLR2111
Wnt/beta-catenin signaling confers ferroptosis resistance by targeting GPX4 in gastric cancer110
Peroxisome-driven ether-linked phospholipids biosynthesis is essential for ferroptosis102
PRMT4 promotes ferroptosis to aggravate doxorubicin-induced cardiomyopathy via inhibition of the Nrf2/GPX4 pathway100
Brain organoids: an ensemble of bioassays to investigate human neurodevelopment and disease100
SARS-CoV-2 non-structural protein 6 triggers NLRP3-dependent pyroptosis by targeting ATP6AP198
Ki-67 gene expression95
CircRNA-vgll3 promotes osteogenic differentiation of adipose-derived mesenchymal stem cells via modulating miRNA-dependent integrin α5 expression91
T cell apoptosis characterizes severe Covid-19 disease89
YTHDC1-mediated augmentation of miR-30d in repressing pancreatic tumorigenesis via attenuation of RUNX1-induced transcriptional activation of Warburg effect88
TRIM22 activates NF-κB signaling in glioblastoma by accelerating the degradation of IκBα86
Methylation of EZH2 by PRMT1 regulates its stability and promotes breast cancer metastasis86
Long noncoding RNA NEAT1 promotes ferroptosis by modulating the miR-362-3p/MIOX axis as a ceRNA85
lncRNA THAP7-AS1, transcriptionally activated by SP1 and post-transcriptionally stabilized by METTL3-mediated m6A modification, exerts oncogenic properties by improving CUL4B entry into the nucleus84
The ubiquitin system: from cell signalling to disease biology and new therapeutic opportunities82
Urolithin A suppresses high glucose-induced neuronal amyloidogenesis by modulating TGM2-dependent ER-mitochondria contacts and calcium homeostasis82
Apoptotic cell death in disease—Current understanding of the NCCD 202382
Crosstalk between cGAS–STING signaling and cell death81
LINC00941 promotes CRC metastasis through preventing SMAD4 protein degradation and activating the TGF-β/SMAD2/3 signaling pathway81
Deubiquitinating enzyme OTUB1 promotes cancer cell immunosuppression via preventing ER-associated degradation of immune checkpoint protein PD-L181
SOCS2-enhanced ubiquitination of SLC7A11 promotes ferroptosis and radiosensitization in hepatocellular carcinoma80
The role of Ubiquitination in Apoptosis and Necroptosis77
GSDME-mediated pyroptosis promotes inflammation and fibrosis in obstructive nephropathy76
Targeting mitochondrial metabolism for precision medicine in cancer75
Adipogenesis of skeletal muscle fibro/adipogenic progenitors is affected by the WNT5a/GSK3/β-catenin axis71
The regulation of necroptosis by post-translational modifications71
ER-mitochondria contact sites in neurodegeneration: genetic screening approaches to investigate novel disease mechanisms70
Intestinal microbiota influences clinical outcome and side effects of early breast cancer treatment69
Immune response in COVID-19: what is next?69
WTAP-mediated m6A modification of lncRNA DIAPH1-AS1 enhances its stability to facilitate nasopharyngeal carcinoma growth and metastasis69
Deubiquitinase USP39 and E3 ligase TRIM26 balance the level of ZEB1 ubiquitination and thereby determine the progression of hepatocellular carcinoma69
BH3 mimetics selectively eliminate chemotherapy-induced senescent cells and improve response in TP53 wild-type breast cancer68
Mutant p53: it’s not all one and the same67
Roles and mechanisms of BAP1 deubiquitinase in tumor suppression67
The intrinsic immunogenic properties of cancer cell lines, immunogenic cell death, and how these influence host antitumor immune responses66
Ferroptosis mediates selective motor neuron death in amyotrophic lateral sclerosis65
Photoreceptor protection by mesenchymal stem cell transplantation identifies exosomal MiR-21 as a therapeutic for retinal degeneration64
USP11 regulates autophagy-dependent ferroptosis after spinal cord ischemia-reperfusion injury by deubiquitinating Beclin 164
Organoid-based modeling of intestinal development, regeneration, and repair62
MLKL in cancer: more than a necroptosis regulator62
KPNB1-mediated nuclear translocation of PD-L1 promotes non-small cell lung cancer cell proliferation via the Gas6/MerTK signaling pathway62
Mitochondria and cell death-associated inflammation61
Mitophagy protein PINK1 suppresses colon tumor growth by metabolic reprogramming via p53 activation and reducing acetyl-CoA production60
Intranasal delivery of mesenchymal stem cell secretome repairs the brain of Alzheimer’s mice60
Organoid systems to study the human female reproductive tract and pregnancy60
Functions of outer mitochondrial membrane proteins: mediating the crosstalk between mitochondrial dynamics and mitophagy60
Cuproptosis: p53-regulated metabolic cell death?59
Gastric organoids—an in vitro model system for the study of gastric development and road to personalized medicine58
The TP53 Database: transition from the International Agency for Research on Cancer to the US National Cancer Institute57
IL-24 deficiency protects mice against bleomycin-induced pulmonary fibrosis by repressing IL-4-induced M2 program in macrophages57
Syncytia formation during SARS-CoV-2 lung infection: a disastrous unity to eliminate lymphocytes56
Past, present, and future perspectives of transcription factor EB (TFEB): mechanisms of regulation and association with disease56
Single-cell RNA sequencing reveals intratumoral heterogeneity in primary uveal melanomas and identifies HES6 as a driver of the metastatic disease55
Exosome-derived miR-142-5p remodels lymphatic vessels and induces IDO to promote immune privilege in the tumour microenvironment55
Cell death and inflammation during obesity: “Know my methods, WAT(son)”53
The miR-92a-2-5p in exosomes from macrophages increases liver cancer cells invasion via altering the AR/PHLPP/p-AKT/β-catenin signaling52
Non-coding RNAs and ferroptosis: potential implications for cancer therapy52
PLK1/vimentin signaling facilitates immune escape by recruiting Smad2/3 to PD-L1 promoter in metastatic lung adenocarcinoma51
Ubiquitin ligase E3 HUWE1/MULE targets transferrin receptor for degradation and suppresses ferroptosis in acute liver injury50
p53 at the crossroad of DNA replication and ribosome biogenesis stress pathways50
EBV infection-induced GPX4 promotes chemoresistance and tumor progression in nasopharyngeal carcinoma50
E6-mediated activation of JNK drives EGFR signalling to promote proliferation and viral oncoprotein expression in cervical cancer50
RIP1 kinase activity promotes steatohepatitis through mediating cell death and inflammation in macrophages50
Should mutant TP53 be targeted for cancer therapy?49
The lipid peroxidation product 4-hydroxynonenal inhibits NLRP3 inflammasome activation and macrophage pyroptosis49
Efferocytosis potentiates the expression of arachidonate 15-lipoxygenase (ALOX15) in alternatively activated human macrophages through LXR activation48
Inhibition of Drp1 SUMOylation by ALR protects the liver from ischemia-reperfusion injury48
Of the many cellular responses activated by TP53, which ones are critical for tumour suppression?47
ALS motor neurons exhibit hallmark metabolic defects that are rescued by SIRT3 activation47
M6A RNA methylation-mediated RMRP stability renders proliferation and progression of non-small cell lung cancer through regulating TGFBR1/SMAD2/SMAD3 pathway46
Primidone blocks RIPK1-driven cell death and inflammation46
Neuronal cell life, death, and axonal degeneration as regulated by the BCL-2 family proteins46
The role of E3 ubiquitin ligases in the development and progression of glioblastoma45
Ubiquitination of NF-κB p65 by FBXW2 suppresses breast cancer stemness, tumorigenesis, and paclitaxel resistance44
Deubiquitinase USP35 restrains STING-mediated interferon signaling in ovarian cancer44
Pathologically high intraocular pressure disturbs normal iron homeostasis and leads to retinal ganglion cell ferroptosis in glaucoma44
Functional crosstalk between myeloid Foxo1–β-catenin axis and Hedgehog/Gli1 signaling in oxidative stress response43
DAPK3 inhibits gastric cancer progression via activation of ULK1-dependent autophagy43
Impaired RIPK1 ubiquitination sensitizes mice to TNF toxicity and inflammatory cell death43
The Met1-linked ubiquitin machinery in inflammation and infection42
Elevated FSP1 protects KRAS-mutated cells from ferroptosis during tumor initiation42
LncRNA NEAT1 controls the lineage fates of BMSCs during skeletal aging by impairing mitochondrial function and pluripotency maintenance42
Circular RNA Cwc27 contributes to Alzheimer’s disease pathogenesis by repressing Pur-α activity42
Building inner ears: recent advances and future challenges for in vitro organoid systems41
Identity, structure, and function of the mitochondrial permeability transition pore: controversies, consensus, recent advances, and future directions40
Regulation of Bcl-XL by non-canonical NF-κB in the context of CD40-induced drug resistance in CLL40
Kupffer cell receptor CLEC4F is important for the destruction of desialylated platelets in mice40
Snail/PRMT5/NuRD complex contributes to DNA hypermethylation in cervical cancer by TET1 inhibition40
Bcl-xL acts as an inhibitor of IP3R channels, thereby antagonizing Ca2+-driven apoptosis39
Nuclear miR-30b-5p suppresses TFEB-mediated lysosomal biogenesis and autophagy39
Ubiquitin signaling in neurodegenerative diseases: an autophagy and proteasome perspective39
UBE2O targets Mxi1 for ubiquitination and degradation to promote lung cancer progression and radioresistance39
p53-dependent elimination of aneuploid mitotic offspring by entosis38
Comorbidity-associated glutamine deficiency is a predisposition to severe COVID-1938
Histone deacetylase 3 aberration inhibits Klotho transcription and promotes renal fibrosis38
Build-UPS and break-downs: metabolism impacts on proteostasis and aging37
USP9X-mediated KDM4C deubiquitination promotes lung cancer radioresistance by epigenetically inducing TGF-β2 transcription37
A toolbox for imaging RIPK1, RIPK3, and MLKL in mouse and human cells37
SARS-CoV-2 membrane protein causes the mitochondrial apoptosis and pulmonary edema via targeting BOK37
The circRNA CNEACR regulates necroptosis of cardiomyocytes through Foxa2 suppression37
MYH9-dependent polarization of ATG9B promotes colorectal cancer metastasis by accelerating focal adhesion assembly36
Repurposing the estrogen receptor modulator raloxifene to treat SARS-CoV-2 infection36
Kdm2a deficiency in macrophages enhances thermogenesis to protect mice against HFD-induced obesity by enhancing H3K36me2 at the Pparg locus36
Epithelium- and endothelium-derived exosomes regulate the alveolar macrophages by targeting RGS1 mediated calcium signaling-dependent immune response36
O-GlcNAcylation of MORC2 at threonine 556 by OGT couples TGF-β signaling to breast cancer progression36
SARS-CoV-2 N501Y variants of concern and their potential transmission by mouse36
MS4A15 drives ferroptosis resistance through calcium-restricted lipid remodeling36
YAP–TEAD1 control of cytoskeleton dynamics and intracellular tension guides human pluripotent stem cell mesoderm specification35
Inhibition of cGAS-STING by JQ1 alleviates oxidative stress-induced retina inflammation and degeneration34
TLR4 downregulation by the RNA-binding protein PUM1 alleviates cellular aging and osteoarthritis34
Selective ferroptosis vulnerability due to familial Alzheimer’s disease presenilin mutations34
Met1-linked ubiquitin signalling in health and disease: inflammation, immunity, cancer, and beyond34
The NSP14/NSP10 RNA repair complex as a Pan-coronavirus therapeutic target33
Glycoprotein PTGDS promotes tumorigenesis of diffuse large B-cell lymphoma by MYH9-mediated regulation of Wnt–β-catenin–STAT3 signaling33
Harnessing TRAIL-induced cell death for cancer therapy: a long walk with thrilling discoveries33
Targeting androgen receptor (AR) with antiandrogen Enzalutamide increases prostate cancer cell invasion yet decreases bladder cancer cell invasion via differentially altering the AR/circRNA-ARC1/miR-133
Reducing FASN expression sensitizes acute myeloid leukemia cells to differentiation therapy32
Exosomal miR-101-3p and miR-423-5p inhibit medulloblastoma tumorigenesis through targeting FOXP4 and EZH232
TRIM21 regulates pyroptotic cell death by promoting Gasdermin D oligomerization32
TRIM26 positively regulates the inflammatory immune response through K11-linked ubiquitination of TAB131
A novel HIF-2α targeted inhibitor suppresses hypoxia-induced breast cancer stemness via SOD2-mtROS-PDI/GPR78-UPRER axis31
Loss of p53 in mesenchymal stem cells promotes alteration of bone remodeling through negative regulation of osteoprotegerin31
Ubiquitin ligase CHIP regulates OTUD3 stability and suppresses tumour metastasis in lung cancer30
N6-Methyladenosine-modified circSAV1 triggers ferroptosis in COPD through recruiting YTHDF1 to facilitate the translation of IREB230
LOXL1 confers antiapoptosis and promotes gliomagenesis through stabilizing BAG230
Genome-scale screening of deubiquitinase subfamily identifies USP3 as a stabilizer of Cdc25A regulating cell cycle in cancer30
Trends and challenges in modeling glioma using 3D human brain organoids30
Bedaquiline, an FDA-approved drug, inhibits mitochondrial ATP production and metastasis in vivo, by targeting the gamma subunit (ATP5F1C) of the ATP synthase30
BCL-XL is crucial for progression through the adenoma-to-carcinoma sequence of colorectal cancer30
SPY1 inhibits neuronal ferroptosis in amyotrophic lateral sclerosis by reducing lipid peroxidation through regulation of GCH1 and TFR129
Repression of p53 function by SIRT5-mediated desuccinylation at Lysine 120 in response to DNA damage29
Necroptosis is dispensable for the development of inflammation-associated or sporadic colon cancer in mice29
Opposing functions of β-arrestin 1 and 2 in Parkinson’s disease via microglia inflammation and Nprl329
Breast cancer dependence on MCL-1 is due to its canonical anti-apoptotic function28
Defective endoplasmic reticulum-mitochondria contacts and bioenergetics in SEPN1-related myopathy28
RIP3-mediated necroptosis is regulated by inter-filament assembly of RIP homotypic interaction motif28
Deubiquitylases in developmental ubiquitin signaling and congenital diseases28
Sequential ubiquitination of p53 by TRIM28, RLIM, and MDM2 in lung tumorigenesis28
USP22 positively modulates ERα action via its deubiquitinase activity in breast cancer28
Inhibiting the Pkm2/b-catenin axis drives in vivo replication of adult cardiomyocytes following experimental MI28
TEAD1 protects against necroptosis in postmitotic cardiomyocytes through regulation of nuclear DNA-encoded mitochondrial genes27
Beyond DNA repair and chromosome instability—Fanconi anaemia as a cellular senescence-associated syndrome27
OTUB1 prevents lethal hepatocyte necroptosis through stabilization of c-IAP1 during murine liver inflammation27
RUNX2 recruits the NuRD(MTA1)/CRL4B complex to promote breast cancer progression and bone metastasis27
Non-coding small nucleolar RNA SNORD17 promotes the progression of hepatocellular carcinoma through a positive feedback loop upon p53 inactivation26
Uncovering the PIDDosome and caspase-2 as regulators of organogenesis and cellular differentiation26
The DJ1-Nrf2-STING axis mediates the neuroprotective effects of Withaferin A in Parkinson’s disease26
Long Covid: where we stand and challenges ahead26
Identification and functional characterization of new missense SNPs in the coding region of the TP53 gene26
Prolonged SARS-CoV-2 RNA virus shedding and lymphopenia are hallmarks of COVID-19 in cancer patients with poor prognosis26
Loss of Ryanodine Receptor 2 impairs neuronal activity-dependent remodeling of dendritic spines and triggers compensatory neuronal hyperexcitability26
Genotoxic stress-activated DNA-PK-p53 cascade and autophagy cooperatively induce ciliogenesis to maintain the DNA damage response26
Long noncoding RNA AVAN promotes antiviral innate immunity by interacting with TRIM25 and enhancing the transcription of FOXO3a26
Targeting the miR-34a/LRPPRC/MDR1 axis collapse the chemoresistance in P53 inactive colorectal cancer26
CDK15 promotes colorectal cancer progression via phosphorylating PAK4 and regulating β-catenin/ MEK-ERK signaling pathway26
dsDNA-induced AIM2 pyroptosis halts aberrant inflammation during rhabdomyolysis-induced acute kidney injury26
Ubiquitin-dependent and -independent functions of OTULIN in cell fate control and beyond26
O-GlcNAcylation and stablization of SIRT7 promote pancreatic cancer progression by blocking the SIRT7-REGγ interaction26
Deubiquitination of MYC by OTUB1 contributes to HK2 mediated glycolysis and breast tumorigenesis26
SPOP mutations promote p62/SQSTM1-dependent autophagy and Nrf2 activation in prostate cancer26
TCF3 is epigenetically silenced by EZH2 and DNMT3B and functions as a tumor suppressor in endometrial cancer25
USP42 drives nuclear speckle mRNA splicing via directing dynamic phase separation to promote tumorigenesis25
The noncoding RNAs SNORD50A and SNORD50B-mediated TRIM21-GMPS interaction promotes the growth of p53 wild-type breast cancers by degrading p5325
SIRT1 coordinates with the CRL4B complex to regulate pancreatic cancer stem cells to promote tumorigenesis25
Kdm6a suppresses the alternative activation of macrophages and impairs energy expenditure in obesity25
Selective autophagy controls the stability of TBK1 via NEDD4 to balance host defense25
Site-specific ubiquitination of MLKL targets it to endosomes and targets Listeria and Yersinia to the lysosomes24
E3 ligase TRIM25 ubiquitinates RIP3 to inhibit TNF induced cell necrosis24
Hypoxia-induced GLT8D1 promotes glioma stem cell maintenance by inhibiting CD133 degradation through N-linked glycosylation24
Dying in self-defence: a comparative overview of immunogenic cell death signalling in animals and plants24
RGS5–TGFβ–Smad2/3 axis switches pro- to anti-apoptotic signaling in tumor-residing pericytes, assisting tumor growth24
MECOM permits pancreatic acinar cell dedifferentiation avoiding cell death under stress conditions24
The long non-coding RNA PFI protects against pulmonary fibrosis by interacting with splicing regulator SRSF124
Single-cell RNA-seq reveals novel mitochondria-related musculoskeletal cell populations during adult axolotl limb regeneration process24
The integrated stress response in ischemic diseases24
PKA compartmentalization links cAMP signaling and autophagy24
Loss of RBMS1 promotes anti-tumor immunity through enabling PD-L1 checkpoint blockade in triple-negative breast cancer24
YB-1 is a positive regulator of KLF5 transcription factor in basal-like breast cancer24
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