Journal of Applied Microbiology

Article	Citations
Issue Information	284
Withdrawn: Abundance, community structure and diversity of nitrifying bacterial enrichments from low and high saline brackishwater environments	167
A comparative study of in-vitro and in-silico anti-candidal activity and GC–MS profiles of snow mountain garlic vs. normal garlic	144
Host range and virulence diversity of Pectobacterium carotovorum subsp. brasiliense strain RDKLR infecting radish in India, and development of a LAMP-based diagnostics	106
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Prevalence and conservation of ebp genes in Enterococcus faecalis originated from animals	78
Selection of Debaryomyces hansenii isolates as starters in meat products based on phenotypic virulence factors, tolerance to abiotic stress conditions and aroma generation	68
Thermal fogging with disinfectants and antifreezes enables effective industrial disinfection in subzero cold-chain environment	64
Epidemiology of major entero-pathogenic viruses and genetic characterization of Group A rotaviruses among children (≤5 years) with acute gastroenteritis in eastern India, 2018–2020	60
Dynamics of fungal and bacterial microbiome associated with green-mould contaminated sawdust substrate of Pleurotus pulmonarius (grey oyster mushroom)	58
Genomic evidence for stability of the Bacillus Calmette-Guérin (BCG) vaccine strain (Pasteur 1173P2) from different batches in Iran	53
Exploring Bacillus thuringiensis as a model for endospore adhesion and its potential to investigate adhesins in Pasteuria penetrans	53
Influence of climatic factors on dry flower, grey and green mould diseases of macadamia flowers in Australia	50
Enhancement of Acinetobacter baumannii biofilm growth by cephem antibiotics via enrichment of protein and extracellular DNA in the biofilm matrices	49
Harnessing rhizobacteria to fulfil inter-linked nutrient dependency on soil and alleviate stresses in plants	49
Butyrate administration strengthens the intestinal epithelium and improves intestinal dysbiosis in a cholestasis fibrosis model	48
Functional fermented meat products with probiotics—A review	48
Could Bacillus biofilms enhance the effectivity of biocontrol strategies in the phyllosphere?	48
Effect of nutritional and environmental conditions on biofilm formation of avian pathogenic Escherichia coli	46
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Grapevine rootstocks drive the community structure of arbuscular mycorrhizal fungi in New Zealand vineyards	46
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The probiotic potential of Lactobacillus plantarum strain RW1 isolated from canine faeces	41
Probiotic properties of yeasts in traditional fermented foods and beverages	41
A carvacrol-based product reduces Campylobacter jejuni load and alters microbiota composition in the caeca of chickens	41
Immunomodulatory and ameliorative effects of probiotic in combination with diclazuril on broilers under coccidia infection	37
Metabolite profiling reveals overexpression of the global regulator, MoLAEA leads to increased synthesis of metabolites in Magnaporthe oryzae	37
Using fermentation waste of ethanol-producing yeast for bacterial riboflavin production and recycling of spent bacterial mass for enhancing the growth of oily plants	35
Antifungal activity of 2-chloro-N-phenylacetamide, docking and molecular dynamics studies against clinical isolates of Candida tropicalis and Candida parapsilosis	35
Metabolomic analysis of sheath blight disease of rice (Oryza sativa L.) induced by Rhizoctonia solani phytotoxin	35
A SARS-CoV-2 oral vaccine development strategy based on the attenuated Salmonella type III secretion system	34
Effect of thermotherapy, Leifsonia xyli subsp. xyli titres, sugarcane genotype and diagnostic techniques on ratoon stunt control in Brazil	33
Beneficial effects of fermented barley extracts on inflammatory status and gut microbiota in high-fat diet-induced obese rats	32
Novel pulsed infrared radiation: Effect on microbial, chemical and sensory properties of saffron (Crocus sativus L.)	32
Fermentation of chickpea flour with selected lactic acid bacteria for improving its nutritional and functional properties	32
Nisin variants from Streptococcus and Staphylococcus successfully express in NZ9800	31
Woodfordia fruticosa extract supplementation stimulates the growth of Lacticaseibacillus casei and Lacticaseibacillus rhamnosus	31
The potential of Bacillus subtilis and phosphorus in improving the growth of wheat under chromium stress	31
Indole decreases the virulence of pathogenic vibrios belonging to the Harveyi clade	31
Effects of mixed culture fermentation of Bacillus amyloliquefaciens and Trichoderma longibrachiatum on its constituent strains and the bio	30
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Antimicrobial resistance—Do we share more than companionship with our dogs?	30
Dose–response analysis of Bacillus thuringiensis HD-1 cry- spore reduction on surfaces using formaldehyde with pre-germination	29
Whole genome sequencing reveals antimicrobial resistance determinants (AMR genes) of Salmonella enterica recovered from raw chicken and ready-to-eat leaves imported into England between 2014 and 2019	29
Whole-genome sequencing links Clostridium (Clostridioides) difficile in a single hospital to diverse environmental sources in the community	28
Metabolite and transcriptome analyses revealed the modulation of fructo-oligosaccharide on ileum metabolism of Taiping chickens	28
Lactobacilli reduce recurrences of vaginal candidiasis in pregnant women: a randomized, double-blind, placebo-controlled study	28
Minimum inhibitory concentrations of commercial essential oils against common chicken pathogenic bacteria and their relationship with antibiotic resistance	27
In vitro and in silico pharmaceutical activities of the methylated cyclic pentapeptide, persipeptides	27
Cinnamaldehyde as antimicrobial in cellulose‐based dental appliances	27
Bacillus subtilis var. natto increases the resistance of Caenorhabditis elegans to gram‐positive bacteria	27
Competitive growth kinetics of Campylobacter jejuni , Escherichia coli O157:H7 and Listeria monocytogenes w	27
Enterococcus faecium HDRsEf1 inhibits Lipopolysaccharide‐induced downregulation of zona occludens ‐1 expression via toll‐like receptor 2/4‐mediated c‐Jun N‐terminal kinase/activator	26
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Analysis of bacterial diversity and genetic evolution of Lacticaseibacillus paracasei isolates in fermentation pit mud	25
Effect of different dosages of sodium butyrate and niacin on growth, faecal microbiota and Vitamin B metabolism in weaned piglets	25
Container material dictates stability of bacteriophage suspensions: Light scattering and infectivity measurements reveal mechanisms of infectious titre decay	25
The inactivation efficacy of plasma-activated acetic acid against Salmonella Typhimurium cells and biofilm	25
Antimicrobial effects of automobile screen washes against Legionella pneumophila	25
Rapid and visual detection of Staphylococcus aureus in milk using a recombinase polymerase amplification-lateral flow assay combined with immunomagnetic separation	25
Plant endophytic bacteria: A potential resource pool of electroactive micro-organisms	25
Comparison of bacterial diversity, root exudates and soil enzymatic activities in the rhizosphere of AVP1-transgenic and nontransgenic wheat (Triticum aestivum L.)	24
Minding the matrix: The importance of inoculum suspensions on finger transfer efficiency of virus	24
An assessment of three methods for extracting bacterial DNA from beach sand	24
Combined analysis of metagenomic data revealed consistent changes of gut microbiome structure and function in inflammatory bowel disease	24
The NDT80-like transcription factor CmNdt80a affects the conidial formation and germination, mycoparasitism, and cell wall integrity of Coniothyrium minitans	24
Evaluating the fermentation quality and bacterial community of high-moisture whole-plant quinoa silage ensiled with different additives	24
Biogenic silver nanoparticle (Bio‐AgNP) has an antibacterial effect against carbapenem‐resistant Acinetobacter baumannii with synergism and additivity when combined with	24
A survey of fermentation parameters, bacterial community compositions and their metabolic pathways during the ensiling of sorghum	24
Layers, broiler chickens and their F1 cross develop distinctly different caecal microbial communities when hatched and reared together	23
Characterization of a novel, biofilm dispersing, lytic bacteriophage against drug-resistant Enterobacter cloacae	23

Antibacterial activity and mechanism of ginger extract against Ralstonia solanacearum	23
In vitro Inhibition of respiratory pathogens by lactobacillus and alpha haemolytic streptococci from Aboriginal and Torres Strait Islander children	23
Using γ-ray irradiation and epiphytic microbiota inoculation to separate the effects of chemical and microbial factors on fermentation quality and bacterial community of ensiled Pennisetum giganteum	23
Special Issue ‘One Health meets Omics: The way forward to investigate zoonosis’	23
Effects of dispersal on species distribution, abundance, diversity and interaction in a bacterial biofilm metacommunity	22
Two novel screened microbial consortia and their application in combination with Lactobacillus plantarum for improving fermentation quality of high-moisture alfalfa	22
Copper stimulates neonicotinoid insecticide thiacloprid degradation by Ensifer adhaerens TMX‐23	22
A methodological review on the characterization of microalgal biofilm and its extracellular polymeric substances	22
Purification and characterization of a robust thermostable protease isolated from Bacillus subtilis strain HR02 as an extremozyme	22
Highly sensitive time‐resolved fluoroimmunoassay for the quantitative onsite detection of Alternaria longipes in tobacco	22
Biocontrol potential of Burkholderia sp. BV6 against the rice blast fungus Magnaporthe oryzae	22
Antifungal potential of Azotobacter species and its metabolites against Fusarium verticillioides and biodegradation of fumonisin	22
Differences in biofilm formation of Salmonella serovars on two surfaces under two temperature conditions	22
Rhizobacterial Bacillus mycoides functions in stimulating the antioxidant defence system and multiple phytohormone signalling pathways to regulate plant growth and stres	22
Rhizospheric and endophyticPseudomonas aeruginosain edible vegetable plants share molecular and metabolic traits with clinical isolates	21
Dodecylamine rapidly kills of spores of multiple Firmicute species: properties of the killed spores and the mechanism of the killing	21
The following articles for this Special Issue were published in different Issues	21
Karlodinium veneficum: Growth optimization, metabolite characterization and biotechnological potential survey	21
Characterization of oxaliplatin removal by multispecies bacterial populations in moving bed biofilm and suspended-biomass reactors	21
Predictive growth kinetic parameters and modelled probabilities of deoxynivalenol production by Fusarium graminearum on wheat during simulated storing conditions	21
Interactive relationship between Trp metabolites and gut microbiota: The impact on human pathology of disease	21
Identification of antibacterial metabolites produced by a marine bacterium Halobacillus marinus HMALI004	21
High-copy genome integration and stable production of p-coumaric acid via a POT1-mediated strategy in Saccharomyces cerevisiae	21
RETRACTED: Guaiacol augments quorum quenching potential of ciprofloxacin against Pseudomonas aeruginosa	21
A comparative genomics approach for identifying genetic factors in Escherichia coli isolates associated with bovine diseases	20
A commercial SnF2 toothpaste formulation reduces simulated human plaque biofilm in a dynamic typodont model	20
Infrared thermography can detect previsual bacterial growth in a laboratory setting via metabolic heat detection	20
Effects of supplementing with Humulus scandens on the growth performance and gut microbiota in piglets	20
Potential hazards associated with the consumption of Scombridae fish: Infection and toxicity from raw material and processing	20
Differing kinetics of anti-spike protein IgGs and neutralizing antibodies against SARS-CoV-2 after Comirnaty (BNT162b2) immunization	20
Effects of water activity, ammonia and Corynebacterium urealyticum on the survival of Salmonella Typhimurium in sterile poultry litter	20
Comparative survival of environmental and clinical Mycobacterium abscessus isolates in a variety of diverse host cells	19
Genomic diversity, virulence and source of Campylobacter jejuni contamination in Irish poultry slaughterhouses by whole genome sequencing	19
Heterologous expression of a cryptic gene cluster from a marine proteobacterium Thalassomonas actiniarum affords new lanthipeptides thalassomonasins A and B	19
The effect of environmental conditions on the occurrence of Campylobacter jejuni and Campylobacter coli in wastewater and surface waters	19
Antibiotyping and genotyping of extensively drug‐resistant (XDR) Salmonella sp. isolated from clinical samples of Lahore, Pakistan	19
Anti-inflammatory potential of Lactobacillus reuteri LM1071 via eicosanoid regulation in LPS-stimulated RAW264.7 cells	18
Rapid detoxification of Jatropha curcas cake by fermentation with a combination of three microbial strains and characterization of their metabolic profiles	18
Bacteriophage-antibiotic combination therapy for multidrug-resistant Pseudomonas aeruginosa: In vitro synergy testing	18
Biosorption of lead ions from aqueous solution by Clostridium tyrobutyricum immobilized in macroporous Ca-alginate-lignin beads	18
Identification of spoilage microflora in draught beer using culture-dependent methods	18
Evaluation of environmental conditions as a decontamination approach for SARS-CoV-2 when applied to common library, archive and museum-related materials	18
Burkholderia gladioli E39CS3, an endophyte of Crocus sativus Linn., induces host resistance against corm‐rot caused by Fusarium oxyspor	18
Distinct dynamics of Vibrio parahaemolyticus populations in two farming models	18
Rhizosphere bacteria induce programmed cell death defence genes and signalling in chilli pepper	18
Phytolectin conjugated positively charged fatty acid amide impairs virulence factors and inhibits cross-kingdom biofilm formation of Candida albicans and uropathogenic Escherichia coli	18
Microbial contamination profile change over a 4‐year period in nonoperated cleft soft palate	18
Postmortem interval assessment by MALDI‐TOF mass spectrometry analysis in murine cadavers	17
Comparative analysis of the gut microbiota in bighead carp under different culture patterns	17
Assessment of humoral immune response to two mRNA SARS-CoV-2 vaccines (Moderna and Pfizer) in healthcare workers fully vaccinated with and without a history of previous infection	17
Bacterial levels and diversity in kitchen sponges and dishwashing brushes used by consumers	17
Epidemiology of resistance of carbapenemase‐producing Klebsiella pneumoniae to ceftazidime‐avibactam in a Chinese hospital	17
Identifying more targeted antimicrobials active against selected bacterial phytopathogens	17
Application of pulsed light technology for fruits and vegetables disinfection: A review	17
Dynamic metabolic modelling predicts efficient acetogen–gut bacterium cocultures for CO‐to‐butyrate conversion	17
Characterization of cinnamon essential oil and its application in Malva sylvestris seed mucilage edible coating to the enhancement of the microbiological, physicochemical and sensory properties of lam	17
Comparison of Monkeypox virus genomes from the 2017 Nigeria outbreak and the 2022 outbreak	17
Characterization of bacterial communities in Coregonus peled fillets during chilled storage and interactions between selected bacterial strains	17
Biochemical features and early adhesion of marine Candida parapsilosis strains on high-density polyethylene	17
Management of Phytophthora parasitica causing gummosis in citrus using biogenic copper oxide nanoparticles	17
Isolation and development of a microbial consortium for the treatment of automobile service station wastewater	17
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Protective effects of Lacticaseibacillus rhamnosus Hao9 on dextran sulphate sodium-induced ulcerative colitis in mice	17
Inhibitory effects of atmospheric dielectric barrier discharge plasma against Bacillus cereus and Staphylococcus aureus on Gwamegi (semi-dried Cololabis saira)	17
Imaging and plate counting to quantify the effect of an antimicrobial: A case study of a photo-activated chlorine dioxide treatment	17
Lactobacillus plantarum as feed additive to improvement in vitro ruminal biofermentation and digestibility of some tropical tree leaves	16
Utilization of palm oil mill effluent as a novel substrate for the production of antifungal compounds by Streptomyces philanthi RM-1-138 and evaluation of its efficacy in suppression of three strains	16
A traditional Ugandan Ficus natalensis bark cloth exhibits antimicrobial activity against methicillin-resistant Staphylococcus aureus	16
Lactobacillus fermentum(MTCC‐5898) alleviatesEscherichia coli‐induced inflammatory responses in intestinal epithelial cells by modulating immune genes and NF‐κB signalling	16
Iron and methyl jasmonate increase high-value PUFA production by elevating the expression of desaturase genes in marine microalga Isochrysis sp.,	16
Mass spectrometry‐based untargeted lipidomics reveals new compositional insights into membrane dynamics of Candida albicans under magnesium deprivation	16
Redesigned pMAL expression vector for easy and fast purification of active native antimicrobial peptides	16
Genomic characterization of high-risk Escherichia coli and Enterobacter hormaechei clones recovered from a single tertiary-care hospital in Pakistan	16
Antifungal action of the combination of ferulic acid and ultraviolet-A irradiation against Saccharomyces cerevisiae	16
Effects of probiotic Lactiplantibacillus plantarum IMC 510 supplementation on metabolic factors in otherwise healthy overweight and obese individuals	15
Integrative analyses of probiotics, pathogenic infections and host immune response highlight the importance of gut microbiota in understanding disease recovery in rainbow trout (Oncorhynchus mykiss)	15
Bactericidal effects of high-energy visible light on common otitis media pathogens	15
The combination of hexanal and geraniol in sublethal concentrations synergistically inhibits quorum sensing in Pseudomonas fluorescens—In vitro and in silico approaches	15
Oxidative lesions and post-treatment viability attenuation of listeria monocytogenes triggered by atmospheric non-thermal plasma	15
Salmonella contamination and hazard analysis in a storage facility for feed materials in Japan	15

Characterization of three novel DyP-type peroxidases from Streptomyces chartreusis NRRL 3882	15
Antibacterial and antibiofilm activities of novel antimicrobial peptide DP7 against the periodontal pathogen Porphyromonas gingivalis	15
Bacteriophages: A weapon against mixed-species biofilms in the food processing environment	15
Biovalorization of spent Konacha tea leaves via single-culture fermentation involving wine yeasts and lactic acid bacteria	15
Norovirus attribution study: Detection of norovirus from the commercial food preparation environment in outbreak and non-outbreak premises	15
Ceriporia lacerata HG2011 enhances P mobilization and wheat agronomic performance irrespective of P fertilization levels	15
Impact of microecological agents on water environment restoration and microbial community structures of trench system in a Baiyangdian wetland ecosystem	14
Characterization of R‐pyocin activity against Gram‐positive pathogens for the first time with special focus on Staphylococcus aureus	14
Infection and antibiotic treatment have prolonged effects on gut microbiota, muscle and hepatic fatty acids in rainbow trout (Oncorhynchus mykiss)	14
Genomic analysis revealed conserved acid tolerance mechanisms from native micro‐organisms in fermented feed	14
Structure and functional capacity of a benzene-mineralizing, nitrate-reducing microbial community	14
Antistaphylococcal and antioxidant activities of bacteriocinogenic lactic acid bacteria and essential oil in goat coalho cheese	14
Conversion of selenite by Haloferax alexandrinus GUSF-1 (KF796625) to pentagonal selenium nanoforms which in vitro modulates the formation of calcium oxalate crystals	14
Comparison of planktonic bacterial communities indoor and outdoor of aquaculture greenhouses	14
Ultrasound-assisted facile synthesis of Boron-Heck-coupled sclareol analogues as potential antibacterial agents against Staphylococcus aureus	14
Algicidal interaction between Paenibacillus polymyxa MEZ6 and microalgae	14
Characterization of nitrilases from Variovorax boronicumulans that functions in insecticide flonicamid degradation and β-cyano-L-alanine detoxification	14
PCR-based ORF typing of Klebsiella pneumoniae for rapid identification of global clones and transmission events	14
Microbiological safety of spinach throughout commercial supply chains in Gauteng Province, South Africa and characterization of isolated multidrug-resistant Escherichia coli	14
Phenotypic characterization of the Hordeum bulbosum derived leaf rust resistance genes Rph22 and Rph26 in barley	14
Antimicrobial compounds from an FDA-approved drug library with activity against Streptococcus suis	14
Optimized methods for detecting Salmonella Typhi in the environment using validated field sampling, culture and confirmatory molecular approaches	14
High-throughput assay for effect screening of amphotericin B and bioactive components on filamentous Candida albicans	14
Probiotic potential of GABA-producing lactobacilli isolated from Uruguayan artisanal cheese starter cultures	13
Membrane vesicles from antibiotic-resistant Staphylococcus aureus transfer antibiotic-resistance to antibiotic-susceptible Escherichia coli	13
Pyroligneous acid and antibacterial activity: criticism of a paper by Araújo et al. (2018)	13
Functional relevance and health benefits of soymilk fermented by lactic acid bacteria	13
Bacterial mandelic acid degradation pathway and its application in biotechnology	13
Testing of candidate probiotics to prevent dental caries induced by Streptococcus mutans in a mouse model	13
Novel amikacin resistance genes identified from human gut microbiota by functional metagenomics	13
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Resistance properties and the role of the inner membrane and coat of Bacillus subtilis spores with extreme wet heat resistance	13
Nanocarriers for combating biofilms: Advantages and challenges	13
Taxonomic and functional diversity of Dendrobium officinale microbiome in Danxia habitat	13
Clostridium butyricum alone or combined with 1, 25‐dihydroxyvitamin D 3 improved early‐stage broiler health by modulating intestinal flora	13
Evaluation of probiotic potential of autochthonous lactobacilli strains isolated from Zabuli yellow kashk, an Iranian dairy product	13
Directional bioconversion and optimization of stevioside into rubusoside by Lelliottia sp. LST-1	13
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Trans‐species transmission of Brucellae among ruminants hampering brucellosis control efforts in Egypt	13
Siderophore production in pseudomonas SP. strain SP3 enhances iron acquisition in apple rootstock	13
Synthesis of chlorogenic acid and p ‐coumaroyl shikimate by expressing shikimate gene modules in Escherichia coli	13
Neuroprotective effects of quercetin produced by an endophytic fungus Nigrospora oryzae isolated from Tinospora cordifolia	13
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