OOIR: Observatory of International Research

Papers

(The TQCC of Journal of Applied Microbiology is 17. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-06-01 to 2026-06-01.)

Article	Citations
Withdrawn: Abundance, community structure and diversity of nitrifying bacterial enrichments from low and high saline brackishwater environments	301
Issue Information	160
Exploring Bacillus thuringiensis as a model for endospore adhesion and its potential to investigate adhesins in Pasteuria penetrans	130
Enhancement of Acinetobacter baumannii biofilm growth by cephem antibiotics via enrichment of protein and extracellular DNA in the biofilm matrices	126
Selection of Debaryomyces hansenii isolates as starters in meat products based on phenotypic virulence factors, tolerance to abiotic stress conditions and aroma generation	93
Harnessing rhizobacteria to fulfil inter-linked nutrient dependency on soil and alleviate stresses in plants	93
Epidemiology of major entero-pathogenic viruses and genetic characterization of Group A rotaviruses among children (≤5 years) with acute gastroenteritis in eastern India, 2018–2020	80
Host range and virulence diversity of Pectobacterium carotovorum subsp. brasiliense strain RDKLR infecting radish in India, and development of a LAMP-based diagnostics	74
Could Bacillus biofilms enhance the effectivity of biocontrol strategies in the phyllosphere?	69
A comparative study of in-vitro and in-silico anti-candidal activity and GC–MS profiles of snow mountain garlic vs. normal garlic	65
Functional fermented meat products with probiotics—A review	62
Effect of nutritional and environmental conditions on biofilm formation of avian pathogenic Escherichia coli	59
Issue Information	57
	56
	56
A carvacrol-based product reduces Campylobacter jejuni load and alters microbiota composition in the caeca of chickens	52
Novel pulsed infrared radiation: Effect on microbial, chemical and sensory properties of saffron (Crocus sativus L.)	52
Fermentation of chickpea flour with selected lactic acid bacteria for improving its nutritional and functional properties	52
The potential of Bacillus subtilis and phosphorus in improving the growth of wheat under chromium stress	49
Beneficial effects of fermented barley extracts on inflammatory status and gut microbiota in high-fat diet-induced obese rats	46
Effect of thermotherapy, Leifsonia xyli subsp. xyli titres, sugarcane genotype and diagnostic techniques on ratoon stunt control in Brazil	44
A SARS-CoV-2 oral vaccine development strategy based on the attenuated Salmonella type III secretion system	44
Antimicrobial resistance—Do we share more than companionship with our dogs?	43
Whole-genome sequencing links Clostridium (Clostridioides) difficile in a single hospital to diverse environmental sources in the community	39
Metabolomic analysis of sheath blight disease of rice (Oryza sativa L.) induced by Rhizoctonia solani phytotoxin	39

Minding the matrix: The importance of inoculum suspensions on finger transfer efficiency of virus	38
The inactivation efficacy of plasma-activated acetic acid against Salmonella Typhimurium cells and biofilm	38
The NDT80-like transcription factor CmNdt80a affects the conidial formation and germination, mycoparasitism, and cell wall integrity of Coniothyrium minitans	37
Effect of different dosages of sodium butyrate and niacin on growth, faecal microbiota and Vitamin B metabolism in weaned piglets	37
Analysis of bacterial diversity and genetic evolution of Lacticaseibacillus paracasei isolates in fermentation pit mud	37
Rapid and visual detection of Staphylococcus aureus in milk using a recombinase polymerase amplification-lateral flow assay combined with immunomagnetic separation	37
Antimicrobial effects of automobile screen washes against Legionella pneumophila	35
Comparison of bacterial diversity, root exudates and soil enzymatic activities in the rhizosphere of AVP1-transgenic and nontransgenic wheat (Triticum aestivum L.)	34
Dose–response analysis of Bacillus thuringiensis HD-1 cry- spore reduction on surfaces using formaldehyde with pre-germination	33
Characterization of oxaliplatin removal by multispecies bacterial populations in moving bed biofilm and suspended-biomass reactors	33
Whole genome sequencing reveals antimicrobial resistance determinants (AMR genes) of Salmonella enterica recovered from raw chicken and ready-to-eat leaves imported into England between 2014 and 2019	33
Special Issue ‘One Health meets Omics: The way forward to investigate zoonosis’	33
Container material dictates stability of bacteriophage suspensions: Light scattering and infectivity measurements reveal mechanisms of infectious titre decay	33
Layers, broiler chickens and their F1 cross develop distinctly different caecal microbial communities when hatched and reared together	32
Purification and characterization of a robust thermostable protease isolated from Bacillus subtilis strain HR02 as an extremozyme	31
Antifungal potential of Azotobacter species and its metabolites against Fusarium verticillioides and biodegradation of fumonisin	31
Antibacterial activity and mechanism of ginger extract against Ralstonia solanacearum	31
Biocontrol potential of Burkholderia sp. BV6 against the rice blast fungus Magnaporthe oryzae	30
Identification of antibacterial metabolites produced by a marine bacterium Halobacillus marinus HMALI004	30
RETRACTED: Guaiacol augments quorum quenching potential of ciprofloxacin against Pseudomonas aeruginosa	29
The following articles for this Special Issue were published in different Issues	29
Genomic diversity, virulence and source of Campylobacter jejuni contamination in Irish poultry slaughterhouses by whole genome sequencing	29
A commercial SnF2 toothpaste formulation reduces simulated human plaque biofilm in a dynamic typodont model	29
A comparative genomics approach for identifying genetic factors in Escherichia coli isolates associated with bovine diseases	28
Effects of supplementing with Humulus scandens on the growth performance and gut microbiota in piglets	28
Potential hazards associated with the consumption of Scombridae fish: Infection and toxicity from raw material and processing	28
Interactive relationship between Trp metabolites and gut microbiota: The impact on human pathology of disease	28
High-copy genome integration and stable production of p-coumaric acid via a POT1-mediated strategy in Saccharomyces cerevisiae	27
Predictive growth kinetic parameters and modelled probabilities of deoxynivalenol production by Fusarium graminearum on wheat during simulated storing conditions	26
Rapid detoxification of Jatropha curcas cake by fermentation with a combination of three microbial strains and characterization of their metabolic profiles	25
Identification of spoilage microflora in draught beer using culture-dependent methods	25
Distinct dynamics of Vibrio parahaemolyticus populations in two farming models	24
Anti-inflammatory potential of Lactobacillus reuteri LM1071 via eicosanoid regulation in LPS-stimulated RAW264.7 cells	24
Assessment of humoral immune response to two mRNA SARS-CoV-2 vaccines (Moderna and Pfizer) in healthcare workers fully vaccinated with and without a history of previous infection	24
Phytolectin conjugated positively charged fatty acid amide impairs virulence factors and inhibits cross-kingdom biofilm formation of Candida albicans and uropathogenic Escherichia coli	23
Characterization of cinnamon essential oil and its application in Malva sylvestris seed mucilage edible coating to the enhancement of the microbiological, physicochemical and sensory properties of lam	22
Issue Information	22
Bacteriophage-antibiotic combination therapy for multidrug-resistant Pseudomonas aeruginosa: In vitro synergy testing	22
Oxidative lesions and post-treatment viability attenuation of listeria monocytogenes triggered by atmospheric non-thermal plasma	21
Imaging and plate counting to quantify the effect of an antimicrobial: A case study of a photo-activated chlorine dioxide treatment	21
Effects of probiotic Lactiplantibacillus plantarum IMC 510 supplementation on metabolic factors in otherwise healthy overweight and obese individuals	21
Identifying more targeted antimicrobials active against selected bacterial phytopathogens	21
Comparison of Monkeypox virus genomes from the 2017 Nigeria outbreak and the 2022 outbreak	21
Characterization of bacterial communities in Coregonus peled fillets during chilled storage and interactions between selected bacterial strains	21
Bacteriophages: A weapon against mixed-species biofilms in the food processing environment	20
Redesigned pMAL expression vector for easy and fast purification of active native antimicrobial peptides	20
Bacterial levels and diversity in kitchen sponges and dishwashing brushes used by consumers	20
Protective effects of Lacticaseibacillus rhamnosus Hao9 on dextran sulphate sodium-induced ulcerative colitis in mice	20
Ceriporia lacerata HG2011 enhances P mobilization and wheat agronomic performance irrespective of P fertilization levels	19
Salmonella contamination and hazard analysis in a storage facility for feed materials in Japan	19

Norovirus attribution study: Detection of norovirus from the commercial food preparation environment in outbreak and non-outbreak premises	19
Biovalorization of spent Konacha tea leaves via single-culture fermentation involving wine yeasts and lactic acid bacteria	19
High-throughput assay for effect screening of amphotericin B and bioactive components on filamentous Candida albicans	19
Antistaphylococcal and antioxidant activities of bacteriocinogenic lactic acid bacteria and essential oil in goat coalho cheese	19
PCR-based ORF typing of Klebsiella pneumoniae for rapid identification of global clones and transmission events	18
Algicidal interaction between Paenibacillus polymyxa MEZ6 and microalgae	18
The combination of hexanal and geraniol in sublethal concentrations synergistically inhibits quorum sensing in Pseudomonas fluorescens—In vitro and in silico approaches	18
Antibacterial and antibiofilm activities of novel antimicrobial peptide DP7 against the periodontal pathogen Porphyromonas gingivalis	18
Characterization of nitrilases from Variovorax boronicumulans that functions in insecticide flonicamid degradation and β-cyano-L-alanine detoxification	18
Ultrasound-assisted facile synthesis of Boron-Heck-coupled sclareol analogues as potential antibacterial agents against Staphylococcus aureus	17
Bacterial mandelic acid degradation pathway and its application in biotechnology	17
Characterization of three novel DyP-type peroxidases from Streptomyces chartreusis NRRL 3882	17
Phenotypic characterization of the Hordeum bulbosum derived leaf rust resistance genes Rph22 and Rph26 in barley	17
Infection and antibiotic treatment have prolonged effects on gut microbiota, muscle and hepatic fatty acids in rainbow trout (Oncorhynchus mykiss)	17
Novel amikacin resistance genes identified from human gut microbiota by functional metagenomics	17