BMC Genomics

Papers
(The TQCC of BMC Genomics is 8. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-10-01 to 2025-10-01.)
ArticleCitations
Proteomic networks and related genetic variants associated with smoking and chronic obstructive pulmonary disease181
Salinity-responsive histone PTMs identified in the gills and gonads of Mozambique tilapia (Oreochromis mossambicus)135
De novo assembly and annotation of the singing mouse genome121
Alteration of chromosome structure impacts gene expressions implicated in pancreatic ductal adenocarcinoma cells111
A putative scenario of how de novo protein-coding genes originate in the Saccharomyces cerevisiae lineage108
Biological factors in the synthetic construction of overlapping genes107
peaksat: an R package for ChIP-seq peak saturation analysis94
Population genetic study of 17 Y-STR Loci of the Sorani Kurds in the Province of Sulaymaniyah, Iraq68
The expression of RBPJ and its potential role in rheumatoid arthritis67
Genomic insights into the antimicrobial resistance and virulence of Helicobacter pylori isolates from gastritis patients in Pereira, Colombia64
Analysis of asymptomatic Drosophila models for ALS and SMA reveals convergent impact on functional protein complexes linked to neuro-muscular degeneration63
UTR-Insight: integrating deep learning for efficient 5′ UTR discovery and design60
Quantitative trait loci and candidate genes for yield-related traits of upland cotton revealed by genome-wide association analysis under drought conditions58
The effect of induced molting on the testicular physiological remodeling in no-semen roosters57
Correction: Alterations in exosomal miRNA profile upon epithelial-mesenchymal transition in human lung cancer cell lines55
Correction to: Spatiotemporal expression profle of novel and known small RNAs throughout rice plant development focussing on seed tissues53
Caregiver-child interaction and early childhood development among preschool children in rural China: the possible role of blood epigenome-wide DNA methylation50
Large-scale integration of meta-QTL and genome-wide association study identifies genomic regions and candidate genes for photosynthetic efficiency traits in bread wheat49
Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach48
Genome-wide association study provided insights into the polled phenotype and polled intersex syndrome (PIS) in goats48
Detecting antibody reactivities in Phage ImmunoPrecipitation Sequencing data48
Autophagy is involved in the toxicity of the biocontrol agent GC16 against Tetranychus pueraricola (Acari: Tetranychidae) based on transcriptomic and proteomic analyses48
The multi-omics signatures of telomere length in childhood47
Integrative multi-omics approach for identifying molecular signatures and pathways and deriving and validating molecular scores for COVID-19 severity and status44
Insights into the taxonomy and virulence-related genetic profiles in 97 Cupriavidus strains through comparative genomic analysis44
Metabolomics, phytohormone and transcriptomics strategies to reveal the mechanism of barley heading date regulation to responds different photoperiod44
Genetic effect of an InDel in the promoter region of the NUDT15 and its effect on myoblast proliferation in chickens44
Identification of candidate proteins influencing spermatogenesis in Shandong black cattle via integrated multiomics analysis44
An in-depth bioinformatic analysis of the novel recombinant lumpy skin disease virus strains: from unique patterns to established lineage44
Characterization of rumen microbiome and immune genes expression of crossbred beef steers with divergent residual feed intake phenotypes43
Genome-wide identification and stress response analysis of cyclophilin gene family in apple (Malus × domestica)43
Revised time estimation of the ancestral human chromosome 2 fusion42
Assembly and comparative analysis of the complete mitochondrial genome of Brassica rapa var. Purpuraria42
Integrated genome and transcriptome analysis reveals pathogenic mechanisms of Calonectria eucalypti in Eucalyptus leaf blight41
From CFTR to a CF signalling network: a systems biology approach to study Cystic Fibrosis41
Gut microbiota profiling variated during colorectal cancer development in mouse41
Multi-omics insights into functional alterations of the liver in growth-retarded offspring: transcriptomic, epigenetic and metabolomic profiles40
HiFiBGC: an ensemble approach for improved biosynthetic gene cluster detection in PacBio HiFi-read metagenomes39
Genome-wide identification and evolutionary analysis of NRAMP family genes in tomato (Solanum lycopersicum L.) under cadmium and salt stress39
plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style38
Molecular characterization of recombinant LSDV isolates from 2022 outbreak in Indonesia through phylogenetic networks and whole-genome SNP-based analysis38
Identification and expression analysis of the glycosyltransferase GT43 family members in bamboo reveal their potential function in xylan biosynthesis during rapid growth38
Comparative genomic analysis of the tricarboxylic acid cycle members in four Solanaceae vegetable crops and expression pattern analysis in Solanum tuberosum38
Genetic architecture of end-use quality traits in soft white winter wheat37
Identification of ABC transporter G subfamily in white lupin and functional characterization of L.albABGC29 in phosphorus use37
Transcriptome analysis reveals fluid shear stress (FSS) and atherosclerosis pathway as a candidate molecular mechanism of short-term low salinity stress tolerance in abalone37
Genome-wide QTL and eQTL mapping reveal genes associated with growth rate trait of the Pacific white shrimp (Litopenaeus vannamei)37
Genomic consequences of intensive inbreeding in miniature inbred pigs37
Genome-wide association study identifies key quantitative trait loci (QTL) for fruit morphometric traits in avocado (Persea spp.)37
Genome-wide identification of AP2/ERF gene family in Coptis Chinensis Franch reveals its role in tissue-specific accumulation of benzylisoquinoline alkaloids36
Genome-wide scan for selection signatures reveals novel insights into the adaptive capacity characteristics in three Chinese cattle breeds36
Effects of hibernation on two important contractile tissues in tibetan frogs, Nanorana parkeri: a perspective from transcriptomics and metabolomics approaches36
Transcriptional response of murine microglia in Alzheimer’s disease and inflammation36
Genome-wide identification of polyamine metabolism and ethylene synthesis genes in Chenopodium quinoa Willd. and their responses to low-temperature stress36
Genome-wide identification, expression analysis of the R2R3-MYB gene family and their potential roles under cold stress in Prunus sibirica36
Evolutionary genetics of flipper forelimb and hindlimb loss from limb development-related genes in cetaceans35
Genome-wide identification and expression analysis reveals spinach brassinosteroid-signaling kinase (BSK) gene family functions in temperature stress response35
SPLHRNMTF: robust orthogonal non-negative matrix tri-factorization with self-paced learning and dual hypergraph regularization for predicting miRNA-disease associations35
A catalog of gene editing sites and genetic variations in editing sites in model organisms35
Clonostachys rosea ‘omics profiling: identification of putative metabolite-gene associations mediating its in vitro antagonism against Fusarium graminearum35
Identification of regulatory loci and candidate genes related to body weight traits in broilers based on different models35
Dynamic physiological and transcriptomic changes reveal memory effects of salt stress in maize35
Examining parent-of-origin effects on transcription and RNA methylation in mediating aggressive behavior in honey bees (Apis mellifera)35
Genome-wide identification and expression analysis of the NRT genes in Ginkgo biloba under nitrate treatment reveal the potential roles during calluses browning34
Cold exposure induces lipid dynamics and thermogenesis in brown adipose tissue of goats34
Construction of the first high-density SNP genetic map and identification of QTLs for the natural rubber content in Taraxacum kok-saghyz Rodin34
Genome assembly and annotation of Babesia rossi, a protozoan parasite for canine babesiosis34
Shared and distinct interactions of type 1 and type 2 Epstein-Barr Nuclear Antigen 2 with the human genome33
SARS-CoV-2 surveillance in Italy through phylogenomic inferences based on Hamming distances derived from pan-SNPs, -MNPs and -InDels33
Understanding host response to infectious salmon anaemia virus in an Atlantic salmon cell line using single-cell RNA sequencing33
Integrated analysis of the transcriptome and hormone metabolome elucidates the regulatory mechanisms governing walnut bud germination33
Comprehensive genome-wide analysis of calmodulin-binding transcription activator (CAMTA) in Durio zibethinus and identification of fruit ripening-associated DzCAMTAs33
RNA-Seq analysis of the pyloric caecum, liver, and muscle reveals molecular mechanisms regulating fillet color in rainbow trout33
A novel isatin Schiff based cerium complex: synthesis, characterization, antimicrobial activity and molecular docking studies32
Genome-wide identification and expression analysis of the xyloglucan endotransglucosylase/hydrolase gene family in poplar32
Phylogeographic relationships and the evolutionary history of the Carassius auratus complex with a newly born homodiploid raw fish (2nNCRC)32
Taxonomy, comparative genomics of Mullein (Verbascum, Scrophulariaceae), with implications for the evolution of Verbascum and Lamiales32
Genome-wide landscape of runs of homozygosity and differentiation across Egyptian goat breeds32
Characterization of fine geographic scale population genetics in sugar kelp (Saccharina latissima) using genome-wide markers31
Introgression of pigs in Taihu Lake region possibly contributed to the improvement of fertility in Danish Large White pigs31
Detection of potential functional variants based on systems-biology: the case of feed efficiency in beef cattle31
Relationship and distribution of Salmonella enterica serovar I 4,[5],12:i:- strain sequences in the NCBI Pathogen Detection database31
Genome-wide association analysis reveals a novel QTL CsPC1 for pericarp color in cucumber31
Small open reading frames: a comparative genetics approach to validation30
Comprehensive analysis of RNA m6A methylation in pressure overload-induced cardiac hypertrophy30
Expression of ABC transporters negatively correlates with ectoine biosynthesis in Halomonas campaniensis under NaCl and ultraviolet mutagenesis treatments revealed by transcriptomic and proteomics com30
Genome-wide analysis of the P450 gene family in tea plant (Camellia sinensis) reveals functional diversity in abiotic stress30
Genome-wide analysis of the BES1 gene family reveals their involvement in grain development of Triticum aestivum L30
Diversity and evolution analysis of RNA viruses in three wheat aphid species29
Beta-galactosidase gene family genome-wide identification and expression analysis of members related to fruit softening in melon (Cucumis melo L.)29
ProEnd: a comprehensive database for identifying HbYX motif-containing proteins across the tree of life29
Genetic and genomic analysis of reproduction traits in holstein cattle using SNP chip data and imputed sequence level genotypes29
Genome-wide identification and expression analysis of the SPL transcription factor family and its response to abiotic stress in Pisum sativum L29
Genome-wide and comparative phylogenetic analysis of senescence-associated NAC transcription factors in sunflower (Helianthus annuus)28
Correction: Comparative transcriptome analysis of skin color-associated genes in leopard coral grouper (Plectropomus leopardus)28
Dexamethasone-induced whitening of rabbit brown adipose tissue: leptin resistance and mitochondrial dysfunction28
The effects of runs-of-homozygosity on pig domestication and breeding28
Ascites-derived hsa-miR-181a-5p serves as a prognostic marker for gastric cancer-associated malignant ascites27
Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in foxtail millet (Setaria italica L.)27
Characterization of Danube Swabian population samples on a high-resolution genome-wide basis27
Genomic analysis of SBP gene family in Saccharum spontaneum reveals their association with vegetative and reproductive development27
Negative effect of seasonal heat stress on testis morphology and transcriptomes in Angora rabbit27
Differential miRNA expression profiles in the bone marrow of Beagle dogs at different stages of Toxocara canis infection27
Genome-wide analysis of polyamine biosynthesis genes in wheat reveals gene expression specificity and involvement of STRE and MYB-elements in regulating polyamines under drought27
A targeted antibody-based array reveals a serum protein signature as biomarker for adolescent idiopathic scoliosis patients27
Transcriptomic and genomic analysis provides new insights in molecular and genetic processes involved in zucchini ZYMV tolerance27
XCVATR: detection and characterization of variant impact on the Embeddings of single -cell and bulk RNA-sequencing samples27
Analysis of miRNAs in milk of four livestock species27
Temperature-induced variation in the transcriptome of maritime pine (Pinus pinaster Ait.) embryogenic masses modulates the phenotype of the derived plants27
Genomic analysis of severe COVID-19 considering or not asthma comorbidity: GWAS insights from the BQC19 cohort26
Single-cell profiling reveals transcriptome dynamics during bovine oocyte growth26
Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B.1.43 strain in the USA26
microRNA regulation of skin pigmentation in golden-back mutant of crucian carp from a rice-fish integrated farming system26
Thirteen complete chloroplast genomes of the costaceae family: insights into genome structure, selective pressure and phylogenetic relationships26
Small RNA sequencing and bioinformatics analysis of RAW264.7-derived exosomes after Mycobacterium Bovis Bacillus Calmette-Guérin infection26
Alternative splicing induces sample-level variation in gene–gene correlations26
A population genomics approach to unlock the genetic potential of lablab (Lablab purpureus (L.) Sweet), an underutilized tropical forage crop26
Genome-wide association study considering genotype-by-environment interaction for productive and reproductive traits using whole-genome sequencing in Nellore cattle26
Physiological and molecular mechanisms of leaf response to high-temperature stress in high-temperature-resistant soybean varieties26
Identification of key genes for triacylglycerol biosynthesis and storage in herbaceous peony (Paeonia lactifolra Pall.) seeds based on full-length transcriptome26
A probabilistic approach to visualize the effect of missing data on PCA in ancient human genomics25
IL-33 priming and antigenic stimulation synergistically promote the transcription of proinflammatory cytokine and chemokine genes in human skin mast cells25
Potential mutagenicity of aflatoxin B1 in Egyptian spices25
Haplotype-resolved genome of Mimosa bimucronata revealed insights into leaf movement and nitrogen fixation25
Genome sequencing and comparative genomics reveal insights into pathogenicity and evolution of Fusarium zanthoxyli, the causal agent of stem canker in prickly ash25
Comparative genotypic characterization related to antibiotic resistance phenotypes of clinical carbapenem-resistant Acinetobacter baumannii MTC1106 (ST2) and MTC0619 (ST25)25
Genome-wide detection of RNA editing events during the hair follicles cycle of Tianzhu white yak25
RNA-Seq uncovers endogenous NO-induced hormone signal transduction and carbon metabolism in response to PEG stress in alfalfa25
Genome-wide identification and molecular expression profile analysis of FHY3/FAR1 gene family in walnut (Juglans sigillata L.) development25
A transcriptome-wide analysis provides novel insights into how Metabacillus indicus promotes coral larvae metamorphosis and settlement25
Genome-wide association study identifies genomic regions associated with key reproductive traits in Korean Hanwoo cows25
Findzx: an automated pipeline for detecting and visualising sex chromosomes using whole-genome sequencing data25
Gene silencing, knockout and over-expression of a transcription factor ABORTED MICROSPORES (SlAMS) strongly affects pollen viability in tomato (Solanum lycopersicum)25
Genome-wide identification of heterotrimeric G protein genes in castor (Ricinus communis L.) and expression patterns under salt stress25
Prediction of lipase-specific foldase-dependence in bacterial lipase subfamilies I.1 and I.225
Microscale total genomic DNA was used to explore the complete mitochondrial genomes of two biting midge species of the family Ceratopogonidae (Insecta: Diptera)25
Splenic comparative transcriptome analysis reveals the immunological mode of undomesticated Gayal (Bos frontalis) for adapting to harsh environments25
Evaluation of methods to detect circular RNAs from single-end RNA-sequencing data25
Bioinformatics analysis of the Microsporidia sp. MB genome: a malaria transmission-blocking symbiont of the Anopheles arabiensis mosquito25
Detection and evaluation of parameters influencing the identification of heterozygous-enriched regions in Holstein cattle based on SNP chip or whole-genome sequence data25
Alternative splicing perspective to prey preference of environmentally friendly biological agent Cryptolaemus montrouzieri25
Genome-wide identification of R2R3-MYB gene family and association with anthocyanin biosynthesis in Brassica species24
Survival of the fittest: genomic investigations of the bay scallop reveal a shift in population structure through a summer mortality event24
Star allele search: a pharmacogenetic annotation database and user-friendly search tool of publicly available 1000 Genomes Project biospecimens24
Defining super-enhancers by highly ranked histone H4 multi-acetylation levels identifies transcription factors associated with glioblastoma stem-like properties24
Chromosomal localization of cohesin is differentially regulated by WIZ, WAPL, and G9a24
Assessment of DNA methylation in porcine immune cells reveals novel regulatory elements associated with cell-specific gene expression and immune capacity traits24
Are we there yet? Benchmarking low-coverage nanopore long-read sequencing for the assembling of mitochondrial genomes using the vulnerable silky shark Carcharhinus falciformis24
A cross-tissue transcriptomic approach decodes glucocorticoid receptor-dependent links to human metabolic phenotypes24
An insight into the draft genome of the Oriental rat flea, Xenopsylla cheopis, together with its Wolbachia endosymbiont24
Transcriptome and co-expression network analysis reveal the genetic basis of cell wall components in maize stalks24
Integrated multi-omics analysis of metabolome and transcriptome profiles during bovine adipocyte differentiation reveals functional divergence of FADS2 isoforms in lipid metabolism regulation24
Intron size minimisation in teleosts24
Immune transcriptomic profile in adult female pigs: dominance status has more influence than environmental enrichment24
Whole exome sequence reveals genetic profiles of primary cardiomyopathy and genotype-phenotype association in Chinese population24
SWATH-MS based proteomics reveals the role of photosynthesis related proteins and secondary metabolic pathways in the colored leaves of sweet olive (Osmanthus fragrans)24
Near telomere-to-telomere genome assemblies of two Chlorella species unveil the composition and evolution of centromeres in green algae24
Genome sequencing reveals novel causative structural and single nucleotide variants in Pakistani families with congenital hypogonadotropic hypogonadism24
Sex-specific differential gene expression during stolonization in the branching syllid Ramisyllis kingghidorahi (Annelida, Syllidae)24
Integrated microRNA and whole-transcriptome sequencing reveals the involvement of small and long non-coding RNAs in the fiber growth of ramie plant24
Integrated analysis of single-cell and bulk RNA sequencing data reveals prognostic characteristics of lysosome-dependent cell death-related genes in osteosarcoma24
Accuracy benchmark of the GeneMind GenoLab M sequencing platform for WGS and WES analysis23
Cyclin-dependent kinases (CDKs) are key genes regulating early development of Neptunea arthritica cumingii: evidence from comparative transcriptome and proteome analyses23
Correction: Genetic diversity and signatures of selection for heat tolerance and immune response in Iranian native chickens23
Comparative transcriptomic analysis of the different developmental stages of ovary in the cuttlefish Sepia pharaonis23
Genome-wide analysis of the AP2/ERF gene family in Tritipyrum and the response of TtERF_B2-50 in salt-tolerance23
Multi-tissue metabolomic profiling reveals the crucial metabolites and pathways associated with scallop growth23
Genetic mapping and candidate gene identification of BoGL5, a gene essential for cuticular wax biosynthesis in broccoli23
The fiber diameter traits of Tibetan cashmere goats are governed by the inherent differences in stress, hypoxic, and metabolic adaptations: an integrative study of proteome and transcriptome23
HTS and scRNA-seq revealed that the location and RSS quality of the mammalian TRBV and TRBJ genes impact biased rearrangement23
Characterization of a strain-specific CD-1 reference genome reveals potential inter- and intra-strain functional variability23
Canine hyper-sociability structural variants associated with altered three-dimensional chromatin state23
Genome-wide identification of MBD gene family members in Eleutherococcus senticosus with their expression motifs under drought stress and DNA demethylation23
Long-read sequencing of extrachromosomal circular DNA and genome assembly of a Solanum lycopersicum breeding line revealed active LTR retrotransposons originating from S. Peruvianum L. introgressions23
Genomic formation of Tibeto-Burman speaking populations in Guizhou, Southwest China23
Genomic and functional insights into commensal streptococci with anti-pneumococcal activity23
Identification of knowledge gaps in whole-genome sequence analysis of multi-resistant thermotolerant Campylobacter spp.23
Single-nucleus RNA sequencing and lipidomics reveal characteristics of transcriptional and lipid composition in porcine longissimus dorsi muscle23
Transcriptome and WGCNA reveals the potential genetic basis of photoperiod-sensitive male sterility in soybean23
Genome-wide identification and evolution of the tubulin gene family in Camelina sativa23
Comparative analysis of the whole transcriptome landscapes of muscle and adipose tissue in Qinchuan beef cattle23
Transcriptome analysis of the endangered dung beetle Copris tripartitus (Coleoptera: Scarabaeidae) and characterization of genes associated to immunity, growth, and reproduction23
Transcription factor-binding k-mer analysis clarifies the cell type dependency of binding specificities and cis-regulatory SNPs in humans22
The landscape of the long non-coding RNAs in developing mouse retinas22
High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata22
The different subtelomeric structure among 1RS arms in wheat-rye 1BL.1RS translocations affecting their meiotic recombination and inducing their structural variation22
TB-DROP: deep learning-based drug resistance prediction of Mycobacterium tuberculosis utilizing whole genome mutations22
Split Pool Ligation-based Single-cell Transcriptome sequencing (SPLiT-seq) data processing pipeline comparison22
Identification of ARF family in blueberry and its potential involvement of fruit development and pH stress response22
Genome-wide identification, expression analysis, and functional study of the bZIP transcription factor family and its response to hormone treatments in pea (Pisum sativum L.)22
Transcriptomic profiling reveals histone acetylation-regulated genes involved in somatic embryogenesis in Arabidopsis thaliana22
scQCEA: a framework for annotation and quality control report of single-cell RNA-sequencing data22
Genome-wide identification of the NLR gene family in Haynaldia villosa by SMRT-RenSeq22
Genome-wide identification, characterization, and expression analysis of the MADS-box gene family in grass pea (Lathyrus sativus) under salt stress conditions22
Comparison of structural variants detected by PacBio-CLR and ONT sequencing in pear22
Genomic mining of Vibrio parahaemolyticus highlights prevalence of antimicrobial resistance genes and new genetic markers associated with AHPND and tdh + /trh + genotypes22
Benchmarking full-length transcript single cell mRNA sequencing protocols22
Identification and response analysis of xyloglucan endotransglycosylase/hydrolases (XTH) family to fluoride and aluminum treatment in Camellia sinensis22
Genomes of the Orestias pupfish from the Andean Altiplano shed light on their evolutionary history and phylogenetic relationships within Cyprinodontiformes21
Novel insights into the Leishmania infantum transcriptome diversity of protein-coding and non-coding sequences in both stages of parasite development using nanopore direct RNA sequencing21
Transcriptome analysis reveals key defense genes associated with resistance to banana blood disease21
Integrative transcriptomics and metabolomics reveal neuroendocrine-lipid crosstalk and adenosine signaling in broiler under heat stress21
Chemical composition determination and transcriptomic analyses provide insight into the differences between wild and grafted Semen Ziziphi Spinosae21
The evolutionary dynamics of genome sizes and repetitive elements in Ensifera (Insecta: Orthoptera)21
Whole-transcriptome sequencing reveals a vernalization-related ceRNA regulatory network in chinese cabbage (Brassica campestris L. ssp. pekinensis)21
Longitudinal multi-omic changes in the transcriptome and proteome of peripheral blood cells after a 4 Gy total body radiation dose to Rhesus macaques21
Effects of glutamate and aspartate on prostate cancer and breast cancer: a Mendelian randomization study21
Chlamydia suis undergoes interclade recombination promoting Tet-island exchange21
Trehalose accumulation contributes to enhanced cold stress tolerance in Telenomus remus, a dominant egg parasitoid of Spodoptera frugiperda21
Seminal fluid proteins induce transcriptome changes in the Aedes aegypti female lower reproductive tract21
Integrative analysis of the steroidal alkaloids distribution and biosynthesis of bulbs Fritillariae Cirrhosae through metabolome and transcriptome analyses21
Complete chloroplast genomes of 13 species of sect. Tuberculata Chang (Camellia L.): genomic features, comparative analysis, and phylogenetic relationships21
MitoCOMON: whole mitochondrial DNA sequencing by primer design and long overlapping amplicon assembly21
MitoDelta: identifying mitochondrial DNA deletions at cell-type resolution from single-cell RNA sequencing data21
Comprehensive analysis of long non-coding RNA and mRNA expression patterns during seminiferous tubules maturation in Guanzhong dairy goats20
Identification and characterization of the T cell receptor (TCR) repertoire of the cynomolgus macaque (Macaca Fascicularis)20
Identification of lncRNA, miRNA and mRNA expression profiles and ceRNA Networks in small cell lung cancer20
The pan-genome of Mycobacterium avium subsp. paratuberculosis (Map) confirms ancestral lineage and reveals gene rearrangements within Map Type S20
Identification of CDK gene family and functional analysis of CqCDK15 under drought and salt stress in quinoa20
ZF-HD gene family in rapeseed (Brassica napus L.): genome-wide identification, phylogeny, evolutionary expansion and expression analyses20
Genome-wide identification and expression pattern analysis of NAC family in Taxus yunnanensis and the TyuNAC30 role in paclitaxel production20
Genome-wide identification, structural homology analysis, and evolutionary diversification of the phospholipase D gene family in the venom gland of three scorpion species20
Organic acid accumulation pattern and its key genes in Chinese cherry fruits20
Genomic and transcriptomic survey of bryozoan Hox and ParaHox genes with emphasis on phylactolaemate bryozoans20
Multi-tiered analyses of honey bees that resist or succumb to parasitic mites and viruses20
Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle20
Alternative splicing level related to intron size and organism complexity20
Combinatorial metabolomic and transcriptomic analysis of muscle growth in hybrid striped bass (female white bass Morone chrysops x male striped bass M. saxatilis)20
Chloroplast genome comparison and taxonomic reassessment of Polygonatum sensu Lato (Asparagaceae): implications for molecular marker development in traditional medicinal plants20
guidedNOMe-seq quantifies chromatin states at single allele resolution for hundreds of custom regions in parallel20
Correction: Comparative genome-wide identification and characterization of SET domain-containing and JmjC domain-containing proteins in piroplasms20
Geometric morphology and population genomics provide insights into the adaptive evolution of Apis cerana in Changbai Mountain20
Understanding the molecular regulation of flavonoid 3’-hydroxylase in anthocyanin synthesis: insights from purple qingke20
Identification of sugar transporter MrSTP20 responding to high-salt stress and hexoses induction in apple rootstock (Malus robusta Rehd)20
Genome-wide expression of the residual lung reacting to experimental Pneumonectomy20
Genome-wide identification of SNPs associated with body weight in yak20
An algorithm for annotation and classification of T. cruzi MASP sequences: towards a better understanding of the parasite genetic variability20
Time-series transcriptomic analysis of Nile tilapia reveals the crucial roles of long non-coding RNA and transcription factor in response to Aeromonas veronii infection20
Comprehensive analysis of the sucrose nonfermenting 1-related protein kinase 2 gene family in broomcorn millet (Panicum miliaceum L.) under abiotic stress conditions20
Correction: Genome-wide association study for stayability at diferent calvings in Nellore beef cattle20
Genome-wide characterization of post-transcriptional processes related to wood formation in Dalbergia odorifera19
Protein features fusion using attributed network embedding for predicting protein-protein interaction19
Genomic trajectories of a near-extinction event in the Chatham Island black robin19
Manipulating base quality scores enables variant calling from bisulfite sequencing alignments using conventional bayesian approaches19
Transcriptome profile of spleen tissues from locally-adapted Kenyan pigs (Sus scrofa) experimentally infected with three varying doses of a highly virulent African swine fever virus genotype IX isolat19
In-silico analysis of deleterious non-synonymous SNPs in the human AVPR1a gene linked to autism19
Correction: Application of RNA sequencing to understand the response of rice seedlings to salt-alkali stress19
The genomic pattern of insertion/deletion variations during rice improvement19
In the battle of the disease: a transcriptomic analysis of European foulbrood-diseased larvae of the Western honey bee (Apis mellifera)19
Complement 3 (C3) within the hypothalamic arcuate nucleus is a potential key mediator of the effect of enhanced nutrition on reproductive development in young bull calves19
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