OOIR: Observatory of International Research

Papers

(The H4-Index of Journal of Biomedical Informatics is 41. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-01-01 to 2026-01-01.)

Article	Citations
A self-supervised language model selection strategy for biomedical question answering	217
Development of a 3-Step theory of suicide ontology to facilitate 3ST factor extraction from clinical progress notes	198
Predicting relations between SOAP note sections: The value of incorporating a clinical information model	129
Corrigendum to “A pipeline for harmonising NHS Scotland laboratory data to enable national-level analyses” [J. Biomed. Inform. 2025 Feb;162:104771. https://doi.org/10.1016/j.jbi.2024.104771. Epub 2025	107
Measuring disease burden with individual cumulative incidence in patients with cirrhosis	102
Discontinuous named entities in clinical text: A systematic literature review	98
Leveraging heterogeneous tabular of EHRs with prompt learning for clinical prediction	97
Realistic 3D infant head surfaces augmentation to improve AI-based diagnosis of cranial deformities	81
Multi-agent norm perception and induction in distributed healthcare	80
From translational bioinformatics computational methodologies to personalized medicine	79
A Syntax-enhanced model based on category keywords for biomedical relation extraction	76
Deep neural networks for neuro-oncology: Towards patient individualized design of chemo-radiation therapy for Glioblastoma patients	73
Cover 1/Spine	71
Identifying cancer sub-types from genomic scale data sets using confidence based integration (CBI)	70
Integrating Mendelian randomization and literature-mined evidence for breast cancer risk factors	67
A robust phenotype-driven likelihood ratio analysis approach assisting interpretable clinical diagnosis of rare diseases	66
Joint modeling of mixed outcomes using a rank-based sparse neural network	65
A multimodal machine learning algorithm improved diagnostic accuracy for otitis media in a school aged Aboriginal population	62
Creating a computer assisted ICD coding system: Performance metric choice and use of the ICD hierarchy	57
Hypothesis-driven modeling of the human lung–ventilator system: A characterization tool for Acute Respiratory Distress Syndrome research	57
One-shot distributed algorithms for addressing heterogeneity in competing risks data across clinical sites	57
Learning the progression patterns of treatments using a probabilistic generative model	56
Towards a unified search: Improving PubMed retrieval with full text	55
Digital Phenotyping of Mental Health using multimodal sensing of multiple situations of interest: A Systematic Literature Review	55
MAM: Flexible Monte-Carlo Agent based model for modelling COVID-19 spread	55

Detection of valvular heart diseases combining orthogonal non-negative matrix factorization and convolutional neural networks in PCG signals	53
ViPal: A framework for virulence prediction of influenza viruses with prior viral knowledge using genomic sequences	52
Introducing the BlendedICU dataset, the first harmonized, international intensive care dataset	51
From centralized to ad-hoc knowledge base construction for hypotheses generation	51
TransDiffECG: Semantically controllable ECG synthesis via transformer-based diffusion modeling	50
Graph-based abstractive biomedical text summarization	50
Informative missingness: What can we learn from patterns in missing laboratory data in the electronic health record?	50
Cover 1/Spine	48
Digital twins in increasing diversity in clinical trials: A systematic review	48
fmi-ii: Table of Contents	48
Providing clinical context to the spatio-temporal analysis of 4D CT perfusion to predict acute ischemic stroke lesion outcomes	45
Predicting pharmacotherapeutic outcomes for type 2 diabetes: An evaluation of three approaches to leveraging electronic health record data from multiple sources	45
Using a clinical narrative-aware pre-trained language model for predicting emergency department patient disposition and unscheduled return visits	44
Clustering-based fusion for medical information retrieval	44
Automatic categorization of self-acknowledged limitations in randomized controlled trial publications	44
Non-invasive prediction of massive transfusion during surgery using intraoperative hemodynamic monitoring data	41
Natural language processing for clinical notes in dentistry: A systematic review	41
MDD-MARF: a multimodal depression detection model based on multi-level attention mechanism and residual fusion	41