OOIR: Observatory of International Research

Papers

(The H4-Index of Journal of Proteome Research is 34. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-01-01 to 2026-01-01.)

Article	Citations
Margaret Dayhoff: A Personal Memoir	238
Systematic Survey of the Regulatory Networks of the Long Noncoding RNA BANCR in Cervical Cancer Cells	192
A Method to Estimate the Distribution of Proteins across Multiple Compartments Using Data from Quantitative Proteomics Subcellular Fractionation Experiments	184
Canadian Proteomics: A Journey across the Country Highlights Discovery and Innovation	169
Targeted Proteomics Profiling for Biomarker Discovery in Glaucoma Using the Olink Proteomics Platform	108
Reverse Phase Proteomic Array Profiling of Asparagine Synthetase Expression in Newly Diagnosed Acute Myeloid Leukemia	90
Integration of Automatic Text Mining and Genomic and Proteomic Analysis to Unravel Prostate Cancer Biomarkers	87
Time-Resolved Multiomics Illustrates Host and Gut Microbe Interactions during Salmonella Infection	86
Longitudinal Proteomic Changes in HCT 116 Colon Cancer Spheroids During Growth	84
Lipidomic Network Analysis Reveals Amyloid-β-Induced Lysosomal Lipid Accumulation in the Cortex and Hippocampus of 5xFAD Mice	80
An Improved Metabolomics Workflow Enables Untargeted Data Acquisition and Targeted Data Analysis Using Liquid Chromatography–Mass Spectrometry	80
Issue Publication Information	68
Evaluation of the Suitability of Dried Saliva Spots for In-Depth Proteome Analyses for Clinical Applications	67
Uncovering Hidden Members and Functions of the Soil Microbiome Using De Novo Metaproteomics	64
Brief Evaluation of Olink Reveal Proximity Extension Assay for High-Throughput Proteomics: A Case Study Using NIST SRM 1950 and Two Spike-In Protein Standards	64
Fast and Memory-Efficient Searching of Large-Scale Mass Spectrometry Data Using Tide	64
Dynamic Phosphotyrosine-Dependent Signaling Profiling in Living Cells by Two-Dimensional Proximity Proteomics	62
DiDBiT-TMT: A Novel Method to Quantify Changes in the Proteomic Landscape Induced by Neural Plasticity	56
Tissue-, Blood-, and Urine-Based Proteomics Changes of Different Endometrial Receptivity Status in Patients after Fertility-Sparing Treatment of Atypical Endometrial Hyperplasia or Endometrial Cancer	54
Pancreatic Digestive Enzyme Dispersion into Human Organs Outside the Gastrointestinal Tract	49
Immunoproteomic Identification of Scedosporium boydii Antigens with Potential Diagnostic Interest in Cystic Fibrosis Patients	47
Protein–Protein Interaction Networks Derived from Classical and Machine Learning-Based Natural Language Processing Tools	45
Multicenter Collaborative Study to Optimize Mass Spectrometry Workflows of Clinical Specimens	45
Multispecies Benchmark Analysis for LC-MS/MS Validation and Performance Evaluation in Bottom-Up Proteomics	43
Untargeted Metabolomic Study of Lung Cancer Patients after Surgery with Curative Intent	42

Statistical Detection of Differentially Abundant Proteins in Experiments with Repeated Measures Designs and Isobaric Labeling	42
Proteomic Profiling of Plasma Extracellular Vesicles Combined with Multivariate Modeling Identified Potential Biomarkers for Distinguishing Benign Pulmonary Nodules from Early-Stage Lung Adenocarcinom	40
Antioxidant Impact of Soft Knotwood Extracts on Human Keratinocytes Shown by NMR Metabolomic Analysis	39
The Future of Proteomics is Up in the Air: Can Ion Mobility Replace Liquid Chromatography for High Throughput Proteomics?	37
Metabolomic Signature in Men with Central Serous Chorioretinopathy Using UHPLC-MS	37
Sequential Proteomic and N-Glycoproteomic Analyses of Bronchoalveolar Lavage Fluids for Potential Biomarker Discovery of Lung Adenocarcinoma	37
SWATH-MS Analysis of Blood Plasma and Circulating Small Extracellular Vesicles Enables Detection of Putative Protein Biomarkers of Fertility in Young and Aged Dairy Cows	36
Data-Independent Acquisition (DIA)-Based Label-Free Redox Proteomics (DIALRP) Identifies Prominent Cysteine Oxidations in Translation Machinery in Prostate Cancer Cells Under Oxidative Stress	36
Metabolomics Reveals Novel Serum Metabolic Signatures in Gastric Cancer by a Mass Spectrometry Platform	35
Discovery of Oogenesis Biomarkers from Mouse Oocytes Using a Single-Cell Proteomics Approach	34
Back to the Future, from a Departing Editor	34
Localization of Multiple O-Linked Glycans Exhibited in Isomeric Glycopeptides by Hot Electron Capture Dissociation	34
¹H NMR Reveals Predictive Metabolic Signatures of Response to RMP1–14 Treatment in the Plasma of Tumor-Bearing Mice	34
Comparative Proteomics and N-Glycoproteomics Reveal the Effects of Different Plasma Protein Enrichment Technologies	34
Issue Publication Information	34