Journal of Proteome Research

Papers
(The H4-Index of Journal of Proteome Research is 35. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-08-01 to 2025-08-01.)
ArticleCitations
Canadian Proteomics: A Journey across the Country Highlights Discovery and Innovation173
Sequential Proteomic and N-Glycoproteomic Analyses of Bronchoalveolar Lavage Fluids for Potential Biomarker Discovery of Lung Adenocarcinoma169
Integration of Automatic Text Mining and Genomic and Proteomic Analysis to Unravel Prostate Cancer Biomarkers147
Margaret Dayhoff: A Personal Memoir146
Systematic Survey of the Regulatory Networks of the Long Noncoding RNA BANCR in Cervical Cancer Cells124
A Method to Estimate the Distribution of Proteins across Multiple Compartments Using Data from Quantitative Proteomics Subcellular Fractionation Experiments95
Targeted Proteomics Profiling for Biomarker Discovery in Glaucoma Using the Olink Proteomics Platform76
Reverse Phase Proteomic Array Profiling of Asparagine Synthetase Expression in Newly Diagnosed Acute Myeloid Leukemia76
Uncovering Hidden Members and Functions of the Soil Microbiome Using De Novo Metaproteomics72
Comprehensive Metabolomics and Lipidomics Profiling of Prostate Cancer Tissue Reveals Metabolic Dysregulations Associated with Disease Development72
Longitudinal Proteomic Changes in HCT 116 Colon Cancer Spheroids During Growth69
Multispecies Benchmark Analysis for LC-MS/MS Validation and Performance Evaluation in Bottom-Up Proteomics64
Antioxidant Impact of Soft Knotwood Extracts on Human Keratinocytes Shown by NMR Metabolomic Analysis63
Comparison of Microflow and Analytical Flow Liquid Chromatography Coupled to Mass Spectrometry Global Metabolomics Methods Using a Urea Cycle Disorder Mouse Model63
SWATH-MS Analysis of Blood Plasma and Circulating Small Extracellular Vesicles Enables Detection of Putative Protein Biomarkers of Fertility in Young and Aged Dairy Cows56
Untargeted Metabolomic Study of Lung Cancer Patients after Surgery with Curative Intent52
Multicenter Collaborative Study to Optimize Mass Spectrometry Workflows of Clinical Specimens52
Metabolomic Signature in Men with Central Serous Chorioretinopathy Using UHPLC-MS50
DiDBiT-TMT: A Novel Method to Quantify Changes in the Proteomic Landscape Induced by Neural Plasticity50
Metabolomics Reveals Novel Serum Metabolic Signatures in Gastric Cancer by a Mass Spectrometry Platform48
Dynamic Phosphotyrosine-Dependent Signaling Profiling in Living Cells by Two-Dimensional Proximity Proteomics48
Time-Resolved Multiomics Illustrates Host and Gut Microbe Interactions during Salmonella Infection47
The Novel Interplay between Commensal Gut Bacteria and Metabolites in Diet-Induced Hyperlipidemic Rats Treated with Simvastatin45
The Future of Proteomics is Up in the Air: Can Ion Mobility Replace Liquid Chromatography for High Throughput Proteomics?42
Lipidomic Network Analysis Reveals Amyloid-β-Induced Lysosomal Lipid Accumulation in the Cortex and Hippocampus of 5xFAD Mice40
Issue Publication Information39
Statistical Detection of Differentially Abundant Proteins in Experiments with Repeated Measures Designs and Isobaric Labeling38
Evaluation of the Suitability of Dried Saliva Spots for In-Depth Proteome Analyses for Clinical Applications37
Data-Independent Acquisition (DIA)-Based Label-Free Redox Proteomics (DIALRP) Identifies Prominent Cysteine Oxidations in Translation Machinery in Prostate Cancer Cells Under Oxidative Stress37
Protein–Protein Interaction Networks Derived from Classical and Machine Learning-Based Natural Language Processing Tools37
Automated High-Throughput Affinity Capture-Mass Spectrometry Platform with Data-Independent Acquisition36
Systematic Assessment of Deep Learning-Based Predictors of Fragmentation Intensity Profiles36
Localization of Multiple O-Linked Glycans Exhibited in Isomeric Glycopeptides by Hot Electron Capture Dissociation36
Novel PPT+SEC Workflow for High-Sensitivity Extracellular Vesicle Proteomics from Cell Media36
Metabolomics Analysis of the Effect of GAT-2 Deficiency on Th1 Cells in Mice35
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