Molecular & Cellular Proteomics

Article	Citations
NovoBoard: A Comprehensive Framework for Evaluating the False Discovery Rate and Accuracy of De Novo Peptide Sequencing	259
Spatial Proteomics Reveals Distinct Protein Patterns in Cortical Migration Disorders Caused by LIN28A Overexpression and WNT Activation	204
Metabolic Enzyme Alterations and Astrocyte Dysfunction in a Murine Model of Alexander Disease With Severe Reactive Gliosis	153
Structural Premise of Selective Deubiquitinase USP30 Inhibition by Small-Molecule Benzosulfonamides	108
Sequencing of Polyclonal Antibodies by Integrating Intact Mass, Middle–Down, and De Novo Bottom–Up Mass Spectrometry	100
Discovery Proteomics Analysis Determines That Driver Oncogenes Suppress Antiviral Defense Pathways Through Reduction in Interferon-β Autocrine Stimulation	95
Proteomic Characterization of Acute Myeloid Leukemia for Precision Medicine	86
Differential Proteome and Interactome Analysis Reveal the Basis of Pleiotropy Associated With the Histidine Methyltransferase Hpm1p	83
PROTEOMIC CHANGES TO THE ANTERIOR CEREBRAL ARTERY IN ALZHEIMER’S DISEASE	82
Table of Contents	79
Easier, More Robust, and Faster Low-flow Quantitative Proteomics Approach	71
CREB-Regulated Transcriptional Coactivator 2 Proteome Landscape is Modulated by SREBF1	69
A Multipathway Phosphopeptide Standard for Rapid Phosphoproteomics Assay Development	67
LC-SRM Combined With Machine Learning Enables Fast Identification and Quantification of Bacterial Pathogens in Urinary Tract Infections	66
In-Cell Chemical Crosslinking Identifies Hotspots for SQSTM-1/p62-IκBα Interaction That Underscore a Critical Role of p62 in Limiting NF-κB Activation Through IκBα Stabilization	65
CellEKT: A Robust Chemical Proteomics Workflow to Profile Cellular Target Engagement of Kinase Inhibitors	62
Temporal Wheat Proteome Remodeling by Deoxynivalenol Reveals Novel Detoxification Signatures and Strategies Across Cultivars	58
A Methanolic Urea-Enhanced Protein Extraction Enabling the Largest Bacterial Phosphorylation Resource	55
mTORC2 Regulates Non-homologous End Joining Through Modulating the Temporal Dynamics of 53BP1	54
Exploring the Early Molecular Pathogenesis of Osteoarthritis Using Differential Network Analysis of Human Synovial Fluid	51
Region- and Cell-type–Resolved Multiomic Atlas of the Heart	51
PS.49 From spatial proteomics to spatial multiomics: leveraging spammR to integrate, analyze, and interpret mass spectrometry imaging data	46
PS.67 Combined bulk and single-cell proteomics identifies novel protein dysfunctions in Alzheimer’s disease	46
PS.118 Identification of KRAS PROTACs Targeting GTP-loaded Alleles	44
PS.46 Algorithm-Powered Mass Spectrometry for Pathogen Identification	43

Integrative Proteogenomics for Differential Expression and Splicing Variation in a DM1 Mouse Model	43
Employing Expression-Matched Controls Enables High-Confidence Proximity-Based Interactome Classification	41
Nuclear Factor I Family Members are Key Transcription Factors Regulating Gene Expression	41
Prenylated PALM2 Promotes the Migration of Esophageal Squamous Cell Carcinoma Cells Through Activating Ezrin	40
Quantitative Proteomic Analysis Reveals Functional Alterations of the Peripheral Immune System in Colorectal Cancer	39
Proteomic Portrait of Degranulation Program in Human Circulating Neutrophils Upon Multi-Inflammatory and Infectious Activation	36
Special Issue: Celebrating the Career of Donald F. Hunt	36
Development of a Fit-For-Purpose Multi-Marker Panel for Early Diagnosis of Pancreatic Ductal Adenocarcinoma	35
Immunopeptidomic Analyses of Colorectal Cancers With and Without Microsatellite Instability	35
A Proteomic Approach Identifies Isoform-Specific and Nucleotide-Dependent RAS Interactions	35
Clinical Proteomics for Solid Organ Tissues	35
WITHDRAWN	34
Proximity Labeling and SILAC-Based Proteomic Approach Identifies Proteins at the Interface of Homotypic and Heterotypic Cancer Cell Interactions	34
Cerebrospinal Fluid Protein Markers Indicate Neuro-Damage in SARS-CoV-2-Infected Nonhuman Primates	34
Developing Cross-linking Mass Spectrometry to Define Protein Interaction Landscapes	34
High-throughput subcellular proteomics reveals phospho-signaling dynamics	33
Toward Comprehensive, Single-molecule Proteomics: Protein Identification by Shortepitope Mapping	33
PRM-LIVE Accelerates Target Class-based Selectivity Profiling of Small Molecule Inhibitors	33
The rise of molecular glues and bifunctional compounds	33
In Situ Cell-Surface Proteomics: Method Development and Applications in Neurobiology	32
Proteogenomic analyses of CRISPR inhibited expression of a panel genes associated with Alzheimer's disease and related dementias in iPSC-derived neurons using a fully automated workflow	31
Dynamic Proteomic Changes in Tumor and Immune Organs Reveal Systemic Immune Response to Tumor Development	31
Phosphoproteome Profiling of the Receptor Tyrosine Kinase MuSK Identifies Tyrosine Phosphorylation of Rab GTPases	31
Proteomic Diversity in Bacteria: Insights and Implications for Bacterial Identification	31
PS.60 Proteomic translation and degradation screen of HECT E3 ligases reveals functional redundancies and exclusivity in E3-substrate relationships	30
The Acyl-Proteome of Syntrophus aciditrophicus Reveals Metabolic Relationships in Benzoate Degradation	30
Back Cover	30
2.1 Protein degraders: New insights and twists of molecular mechanism and drug design	29
Filter-Aided Extracellular Vesicle Enrichment (FAEVEr) for Proteomics	29
Recent Advances in Mass Spectrometry-Based Studies of Post-Translational Modifications in Alzheimer’s Disease	29
Degradomic Identification of Membrane Type 1-Matrix Metalloproteinase as an ADAMTS9 and ADAMTS20 Substrate	28
Proteins in Tumor-Derived Plasma Extracellular Vesicles Indicate Tumor Origin	28
Integrative Proteomics and N-Glycoproteomics Analyses of Rheumatoid Arthritis Synovium Reveal Immune-Associated Glycopeptides	28
Proteome Profiling of Cerebrospinal Fluid and Machine Learning Reveal Protein Classifiers of Two Forms of Alzheimer’s Disease Characterized by Increased or Not Altered Levels of Tau	28
Deep Learning Prediction Boosts Phosphoproteomics-Based Discoveries Through Improved Phosphopeptide Identification	28
HEXB Drives Raised Paucimannosylation in Colorectal Cancer and Stratifies Patient Risk	27
DIA-Based Phosphoproteomics Identifies Early Phosphorylation Events in Response to EGTA and Mannitol in Arabidopsis	27
The in vivo Interaction Landscape of Histones H3.1 and H3.3	26
Recent Advances in Mass Spectrometry-Based Protein Interactome Studies	25
Proteomics Profiling of Human Synovial Fluid Suggests Increased Protein Interplay in Early-Osteoarthritis (OA) That Is Lost in Late-Stage OA	25
Real-Time Search-Assisted Acquisition on a Tribrid Mass Spectrometer Improves Coverage in Multiplexed Single-Cell Proteomics	25
Bridging the Gap From Proteomics Technology to Clinical Application: Highlights From the 68th Benzon Foundation Symposium	25
Improved Mass Spectrometry–Based Methods Reveal Abundant Propionylation and Tissue-Specific Histone Propionylation Profiles	24
Proteomics, Transcriptomics, and Phosphoproteomics Reveal the Mechanism of Talaroconvolutin-A Suppressing Bladder Cancer via Blocking Cell Cycle and Triggering Ferroptosis	24
Phosphoproteome Analysis Identifies a Synaptotagmin-1-Associated Complex Involved in Ischemic Neuron Injury	24
A Peptidisc-Based Survey of the Plasma Membrane Proteome of a Mammalian Cell	24
Multi-Omics Analysis Unveils Nsun5-Mediated Molecular Alterations in the Somatosensory Cortex and Its Impact on Pain Sensation	23
An Automated Workflow to Address Proteome Complexity and the Large Search Space Problem in Proteomics and HLA-I Immunopeptidomics	23
Proteomic Identification of Autophagy Cargo Using Novel Tools in Combination with Quantitative Proteomics.	23
Assessment of Kinome-Wide Activity Remodeling upon Picornavirus Infection	23

Multi-nanoparticle Workflow Enables Deep Plasma Proteomics at Scale, with Enhanced Precision, and Depths of Coverage	23
Highly multiplexed label-free imaging of tissue proteoforms using individual ion mass spectrometry	22
Mapping diverse proteome responses with intelligent mass spectrometry	22
Relative Quantification of Proteins in Formalin-Fixed Paraffin-Embedded Breast Cancer Tissue Using Multiplexed Mass Spectrometry Assays	22
Highly multiplexed proteome-wide quantitation of functional residues enabled by a novel 11plex-AzidoTMT reagent	22
Automated workflows for DIA data using DIA-NN on the PaSER platform	22
Mass spectrometry and SomaScan technologies to detect a plasma copper proteome in two human populations	22
Accurate MS-Based Diagnostic Amyloid Typing Using Endogenously Normalized Protein Intensities in Formalin-Fixed Paraffin-Embedded Tissue	21
PS.73 Parallel Accumulation Mobility Aligned Fragmentation Analysis Enables 1,000 Hz Speeds with 100% Ion Utilization for Fast and Sensitive Discovery Workflows	21
From Discovery to Delivery: A Rapid and Targeted Proteomics Workflow for Monitoring Chinese Hamster Ovary Biomanufacturing	21
PS.89 Antitumor and Pro-apoptotic Effects of Chetomin in Human Melanoma	20
PS.21 Iodine monochloride as a probe of the proteome of the volatile odorant uptake pathway in insect olfaction	20
The Role of Clinical Glyco(proteo)mics in Precision Medicine	20
The One Hour Human Proteome	20
3.4 The Lysine L-Lactylation Pathway: Biochemistry, Epigenetics and Pathophysiology	20
Table of Contents	20
PS.59 Impaired CO2-mediated Cerebral Blood Flow Regulation in the Absence of Hb βC93A in a Murine Model	20
TIMAHAC: Streamlined Tandem IMAC-HILIC Workflow for Simultaneous and High-Throughput Plant Phosphoproteomics and N-glycoproteomics	20
Prospective on Imaging Mass Spectrometry in Clinical Diagnostics	20
MS.6 Large-scale protein concentration profiling with MaxQuantAtlas	20
PS.9 Automated MagNet Enrichment Unlocks Deep and Cost-Effective LC-MS Plasma Proteomics	20
MS.1 Using Quantitative Proteomics for Biodosimetry and the Assessment of Low Dose Radiation Exposure	20
Enhanced In Situ Spatial Proteomics by Effective Combination of MALDI Imaging and LC-MS/MS	20
PS.64 An Oncogenic Virus Drives Dynamic Alterations to the Tumor-Infection Microenvironment	19
(Sialyl)Lewis Antigen Expression on Glycosphingolipids, N-, and O-Glycans in Colorectal Cancer Cell Lines is Linked to a Colon-Like Differentiation Program	19
3.6 Motif-Based Approaches for Analyzing Phosphoproteomic Mass Spectrometry Datasets Identify Signaling Dependencies in Cancers Lacking Known Oncogenic Drivers	19
PS.30 Unlocking next-generation insights in LC-MS based proteomics with a scalable and sustainable workflow strategy	19
In-Depth Analysis of miRNA Binding Sites Reveals the Complex Response of Uterine Epithelium to miR-26a-5p and miR-125b-5p During Early Pregnancy	19
Cover	19
PS.93 Profiling the Senescent Cell Surfaceome to Elucidate Senescence Biology and Identify Senotherapeutic Targets	19
2.4 Defining Proteoform-Specific Interactions for Drug Targeting in a Native Cell Signalling Environment	19
4.9 The interface between metabolism and immunity within a virus microenvironment	19
Generation of a Deep Mouse Brain Spectral Library for Transmembrane Proteome Profiling in Mental Disease Models	18
Chemical Proteomics Reveals Nε-Fatty-Acylation of Septins by Rho Inactivation Domain (RID) of the Vibrio MARTX Toxin to Alter Septin Localization and Organization	18
Protein Kinase Signaling Networks Driven by Oncogenic Gq/11 in Uveal Melanoma Identified by Phosphoproteomic and Bioinformatic Analyses	18
Mapping Hydrogen Migration Thresholds for Site-Specific HDX-MS	18
Integrated Immunopeptidomics and Proteomics Study of SARS-CoV-2–Infected Calu-3 Cells Reveals Dynamic Changes in Allele-specific HLA Abundance and Antigen Presentation	18
PS.18 Expanded Coverage of Protein Post Translational Modifications Through Use of Complementary Proteases	18
TEAD Proteins Associate With DNA Repair Proteins to Facilitate Cellular Recovery From DNA Damage	18
Whole Blood Proteome Dynamics Defines Predictive Diagnostic and Prognostic Signatures of Cryptococcal Infection	18
11th Asia Oceania Human Proteome Organization Congress Report	17
Yellow Fever Blood Proteomics Study by Trapped Ion Mobility Mass Spectrometry	17
Clinical Proteomics: A Promise Becoming Reality	17
MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Datasets	17
Mapping the Degradable Kinome: A Resource for Expedited Degrader Development	17
Back Cover	17
Multiomic Metabolic Enrichment Network Analysis Reveals Metabolite–Protein Physical Interaction Subnetworks Altered in Cancer	17
Three-dimensional feature matching improves the sensitivity of single-cell and spatial proteomics	17
Elucidating Fibroblast Growth Factor–Induced Kinome Dynamics Using Targeted Mass Spectrometry and Dynamic Modeling	17
Causal Inference and Annotation of Phosphoproteomics Data in Multiomics Cancer Studies	17
Cover	17
Deciphering the highly complex cancer immunopeptidome	17
Computational challenges of identification and quantification algorithms in single-cell proteomic data.	17
Deciphering Spatial Protein–Protein Interactions in Brain Using Proximity Labeling	17
Combining Data Independent Acquisition With Spike-In SILAC (DIA-SiS) Improves Proteome Coverage and Quantification	17
Proximity Labeling of the Tau Repeat Domain Enriches RNA-Binding Proteins That Are Altered in Alzheimer's Disease and Related Tauopathies	16
SIRT3 Functions as an Eraser of Histone H3K9 Lactylation to Modulate Transcription for Inhibiting the Progression of Esophageal Cancer	16
Proteome-Wide Monitoring of Drug Action in Living Cells Using a Novel Label-Free Solvent-Based Shift Assay	16
pXg: Comprehensive Identification of Noncanonical MHC-I–Associated Peptides From De Novo Peptide Sequencing Using RNA-Seq Reads	16
Properties, Origin, and Consistency of Truncated Proteoforms Across Top-Down Proteomic Studies	16
A Time Point Proteomic Analysis Reveals Protein Dynamics of Plasmodium Oocysts	16
Improving the Depth and Reliability of Glycopeptide Identification Using Protein Prospector	16
Proteomics Data Imputation With a Deep Model That Learns From Many Datasets	15
Deep Learning Enhances Precision of Citrullination Identification in Human and Plant Tissue Proteomes	15
Localized K63 Ubiquitin Signaling Is Regulated by VCP/p97 During Oxidative Stress	15
Uncommon N-Glycan Structures in Anhydrobiotic Tardigrades	15
Serendipity and the slime mold: a visual survey of high molecular-weight protein assemblies reveals the structure of the polyketide synthase Pks16	15
Restrained Wnt Signaling Pathway by Enhanced EsGSK3β Activity Facilitates the Infection of Spiroplasma and Leads to Neuropathic Diseases in Crustaceans	15
A New Monoclonal Antibody Enables BAR Analysis of Subcellular Importin β1 Interactomes	15
Jolkinolide B Activates Mitophagy to Exhibit Antipancreatic Cancer Activity and Alleviate Cognitive Deficits in Alzheimer's Disease	15
Early Life Exposure to Deltamethrin Impairs Synaptic Function by Altering the Brain-Derived Extracellular Vesicle Proteome	15
Probing the sORF-Encoded Peptides of Deinococcus radiodurans in Response to Extreme Stress	15
Comparative Evaluation of Solid-Phase and Membrane Mimetic Strategies in Membrane Proteome Coverage and Disease-State Analysis	15
MSstatsTMT Improves Accuracy of Thermal Proteome Profiling	15
Proteogenomic Analysis of Breast Cancer Transcriptomic and Proteomic Data, Using De Novo Transcript Assembly: Genome-Wide Identification of Novel Peptides and Clinical Implications	14
Comparative N-Glycoproteomics Reveals Subtype-Specific N-Glycosylation Signatures and Immune Associations in Cholangiocarcinoma	14
Phosphoproteomic Analysis of FLCN Inactivation Highlights Differential Kinase Pathways and Regulatory TFEB Phosphoserines	14
PS.2 Integrated Omics of Multiple Post-Translational Modifications Reveals Host Cellular Pathways and Therapeutic Targets in Coronavirus 229E Infection	14
Large-Scale Plasma Proteome Epitome Profiling is an Efficient Tool for the Discovery of Cancer Biomarkers	14
Zscan4 as a Candidate Conveyor of Early Developmental Defects in O-GlcNAc Transferase Intellectual Disability	14

Multi-omics Characterization of Acquired Olaparib Resistance in BRCA1 and BRCA2 Mutant Breast Cancer Cell Lines	14
PS.45 The dynamic TRPV2 ion channel proximity proteome reveals functional links of calcium flux with cellular adhesion factors NCAM and L1CAM in neurite outgrowth	14
Cover	14
In-cell Proteomics Enables High-Resolution Spatial and Temporal Mapping of Early Xenopus tropicalis Embryos	13
Quantification and Proteomic Characterization of β-Hydroxybutyrylation Modification in the Hearts of AMPKα2 Knockout Mice	13
Trypanosoma cruzi cardiomyocyte infection promotes innate immune response and metabolic rewiring	13
AMPylation Regulates 5′-3′ Exonuclease PLD3 Processing	13
Phosphorylation Dynamics in a flg22-Induced, G Protein–Dependent Network Reveals the AtRGS1 Phosphatase	13
msqrob2PTM: Differential Abundance and Differential Usage Analysis of MS-Based Proteomics Data at the Posttranslational Modification and Peptidoform Level	13
WITHDRAWN	13
Complexome profiling of mitochondrial oxidative phosphorylation knockout models.	13
Tracking drug action at the cell surface and the secreted proteome	13
Sulconazole Induces PANoptosis by Triggering Oxidative Stress and Inhibiting Glycolysis to Increase Radiosensitivity in Esophageal Cancer	13
Application of stable isotope labelingbased quantitative PTM proteomics and interactomics in study of Arabidopsis cell signaling	13
Landscape of Steroid Dynamics in Pregnancy: Insights From the Maternal-Placental-Fetal Unit and Placental Models	13
An Automated Nanowell-Array Workflow for Quantitative Multiplexed Single-Cell Proteomics Sample Preparation at High Sensitivity	12
WITHDRAWN	12
Exploring the Spatial Landscape of the Estrogen Receptor Proximal Proteome With Antibody-Based Proximity Labeling	12
Evaluating timsTOF Pro 2 for the analysis of histone PTMs measured in Global Chromatin Profiling using dia-PASEF and prm-PASEF	12
Antibody Profiling of Pan-Cancer Viral Proteome Reveals Biomarkers for Nasopharyngeal Carcinoma Diagnosis and Prognosis	12
PS.116 Proteomic Profiling of Targeting ERK 1/2 and Vitamin A Signaling Pathways in Asthmatic Epithelial Cells for Airway Remodeling	12
A Proteogenomic Pipeline for the Analysis of Protein Biosynthesis Errors in the Human Pathogen Candida albicans	12
PS.107 High-throughput peptide-centric local stability assay extends protein-ligand identification to membrane proteins, tissues, and bacteria	12
The biological basis and analyses of N-glycan microheterogeneity	12
Predicting Protein Pathways Associated to Tumor Heterogeneity by Correlating Spatial Lipidomics and Proteomics: The Dry Proteomic Concept	12
Antibody-based enrichment of phosphotyrosine peptides using magnetic beads simplifies and outperforms results obtained using Protein A agarose beads	12
PS.85 C-COMPASS: A user-friendly neural network tool profiles cell compartments at protein and lipid levels	12
Robust and accurate redox metabolomics and proteomics of clinical samples by in situ derivatization of free thiols	12
Analyzing N-Glycosylation Biosynthetic Networks Using Mass Spectrometry	12
Galectin-4 Antimicrobial Activity Primarily Occurs Through its C-Terminal Domain	12
WITHDRAWN	12
Proteome Mapping of the Human Pancreatic Islet Microenvironment Reveals Endocrine–Exocrine Signaling Sphere of Influence	12
Comparative Proteome and Cis-Regulatory Element Analysis Reveals Specific Molecular Pathways Conserved in Dog and Human Brains	12
GRable Version 1.0: A Software Tool for Site-Specific Glycoform Analysis With Improved MS1-Based Glycopeptide Detection With Parallel Clustering and Confidence Evaluation With MS2 Information	11
inSPIRE: An Open-Source Tool for Increased Mass Spectrometry Identification Rates Using Prosit Spectral Prediction	11
PS.58 Simultaneous chemoproteomic and phosphoproteomic profiling uncovers changes in the Hippo pathway in drug resistance	11
Bioinertization of NanoLC/MS/MS Systems by Depleting Metal Ions From the Mobile Phases for Phosphoproteomics	11
PS.6 ENRICHplus enables enhanced plasma proteome coverage while preserving quantitative accuracy	11
PS.15 Structural characterization of N-glycan isomers with α2-3 and α2-6 sialyl linkages in phosvitin, a highly phosphorylated protein found in egg yolk	11
Serum Exosomes From Epithelial Ovarian Cancer Patients Contain LRP1, Which Promotes the Migration of Epithelial Ovarian Cancer Cell	11
Challenges and Opportunities for Single-cell Computational Proteomics	11
Experience-Induced Remodeling of the Hippocampal Post-synaptic Proteome and Phosphoproteome	11
Proteomic Analysis of Small Extracellular Vesicles From Lymphatic Affluents in Developing Premetastatic Niche in Melanoma	11
Immunopeptidomics Mapping of Listeria monocytogenes T Cell Epitopes in Mice	11
Integrated Multiomics Reveals Alterations in Paucimannose and Complex Type N-Glycans in Cardiac Tissue of Patients with COVID-19	11
Cover	11
MS.8 High-throughput perturbation proteomics with DIA for construction of AI virtual cells	11
Integrated Proteomics to Understand the Role of Neuritin (NRN1) as a Mediator of Cognitive Resilience to Alzheimer’s Disease	11
Nucleolar Proteomics Revealed the Regulation of RNA Exosome Localization by MTR4	11
High-Throughput Proteomic and Phosphoproteomic Analysis of Formalin-Fixed Paraffin-Embedded Tissues	11
Single-Cell Proteomics Reveals Specific Cellular Subtypes in Cardiomyocytes Derived From Human iPSCs and Adult Hearts	11
Unified Workflow for the Rapid and In-Depth Characterization of Bacterial Proteomes	11
Insight Into the Dynamics of the Ixodes ricinus Nymphal Midgut Proteome	11
Author Index	11
Mass Spectrometry–Driven Discovery of Neuropeptides Mediating Nictation Behavior of Nematodes	11
Spatial Proteomics Reveals Differences in the Cellular Architecture of Antibody-Producing CHO and Plasma Cell–Derived Cells	10
Editorial Board	10
Cover	10
The Proteome of Large or Small Extracellular Vesicles in Pig Seminal Plasma Differs, Defining Sources and Biological Functions	10
Cover	10
Comprehensive Evaluation of Cleavable Bioorthogonal Probes for Site-Specific O-GlcNAc Proteomics	10
The Proteome and Phosphoproteome Uncovers Candidate Proteins Associated With Vacuolar Phosphate Signal Multipled by Vacuolar Phosphate Transporter 1 (VPT1) in Arabidopsis	10
Super Enhanced Purification of Denatured-Refolded Ubiquitinated Proteins by ThUBD Revealed Ubiquitinome Dysfunction in Liver Fibrosis	10
PS.104 High-sensitivity in vivo N-terminomics reveals novel caspase substrates involved in cell extrusion during apoptosis in Drosophila wing discs	10
WITHDRAWN	10
PS.25 Bioactive Constituents, Antioxidant and Anti-Inflammatory Effects of Uvaria chamae Stem Extracts on Carbon Tetrachloride-Induced Toxicity in Rats	10
Early Proteomic Characteristics and Changes in the Optic Nerve Head, Optic Nerve, and Retina in a Rat Model of Ocular Hypertension	10
Exploration of Nitrotyrosine-Containing Proteins and Peptides by Antibody-Based Enrichment Strategies	10
Cover	10
PS.16 Advancing Protein Misfolding Prediction with Quantum Machine Learning: Implications for Cancer and Neurodegenerative Diseases	10
Ciliopathy-Associated Missense Mutations in IFT140 are Tolerated by the Inherent Resilience of the IFT Machinery	10
Global Proteomics Reveals Distinct Muscle Adaptations to Menstrual Cycle Phase-Based Sprint Interval Training in Endurance-Trained Females	10
MSFragger-Labile: A Flexible Method to Improve Labile PTM Analysis in Proteomics	10
PS.29 A Mass Tag Screening Platform Enables Pooled Evaluation of >5000 Mass Tags for plexDIA Applications and Beyond.	10
Post-translational Modifications and Their Effects on the Conformation and Function of Hsp90 in Embryonic Stem Cells	10
An AI-driven leap forward in peptide identification through deconvolution of chimeric spectra	10
Application of Liquid-Liquid Extraction for N-terminal Myristoylation Proteomics	10
Exploring How Workflow Variations in Denaturation-Based Assays Impact Global Protein-Protein Interaction Predictions	10
PS.75 Charting a nanoscale map of the human cell surface proteome using proximity labeling proteomics	10
PS.40 Proteomic Analysis of Pancreatic Adaptations to 8:2 Fluorotelomer Alcohol (8:2 FTOH) Exposure in Male Mice Highlights Upregulation of Insulin Secretion	10
Exploring Virus–Host Interactions Through Combined Proteomic Approaches Identifies BANF1 as a New Essential Factor for African Swine Fever Virus	10
Serum N-Glycans as Independent Predictors of Death: A Prospective Investigation in the AEGIS Cohort	10
Insights Into Glycobiology and the Protein-Glycan Interactome Using Glycan Microarray Technologies	10
Innovations Toward Immunopeptidomics	10
Proteome imaging of human pancreas with a novel microPOTS platform	9
Intelligent Data Acquisition Approaches for Single Cell Proteomics	9
Multiomic Analysis Reveals Disruption of Cholesterol Homeostasis by Cannabidiol in Human Cell Lines	9
Proteogenomic analysis of multiple myeloma reveals therapeutic opportunities and predictive signatures	9
Proteomic Characterization of Renal Cell Carcinoma Using MALDI-MS Imaging	9
Development of a Spectral Library for the Discovery of Altered Genomic Events in Mycobacterium avium Associated With Virulence Using Mass Spectrometry–Based Proteogenomic Analysis	9
4.4 Unlocking the Potential of Untargeted Plasma Proteomics for Lung Cancer: Translating Discovery to a Liquid Biopsy LDT	9
BAMS: A Robust Analytical Platform for Quantifying Histone Modifications and Various Proteoforms by IP MALDI MS	9
WITHDRAWN	9
Proteomic Profiling of Muscular Adaptations to Short-Term Concentric Versus Eccentric Exercise Training in Humans	9
Change in Publication Schedule	9