Molecular & Cellular Proteomics

Article	Citations
Single-cell Proteomics: Progress and Prospects	225
IonQuant Enables Accurate and Sensitive Label-Free Quantification With FDR-Controlled Match-Between-Runs	179
Acquiring and Analyzing Data Independent Acquisition Proteomics Experiments without Spectrum Libraries	172
Fast Quantitative Analysis of timsTOF PASEF Data with MSFragger and IonQuant	152
ReactomeGSA - Efficient Multi-Omics Comparative Pathway Analysis	149
Proximity Dependent Biotinylation: Key Enzymes and Adaptation to Proteomics Approaches	138
DEqMS: A Method for Accurate Variance Estimation in Differential Protein Expression Analysis	133
MaxQuant Software for Ion Mobility Enhanced Shotgun Proteomics	129
A Pragmatic Guide to Enrichment Strategies for Mass Spectrometry–Based Glycoproteomics	125
An Improved Boosting to Amplify Signal with Isobaric Labeling (iBASIL) Strategy for Precise Quantitative Single-cell Proteomics	122
The Peptide Vaccine of the Future	104
Decoding Post-Translational Modification Crosstalk With Proteomics	98
MSstatsTMT: Statistical Detection of Differentially Abundant Proteins in Experiments with Isobaric Labeling and Multiple Mixtures	97
Proximity Extension Assay in Combination with Next-Generation Sequencing for High-throughput Proteome-wide Analysis	95
Site-specific N-glycosylation Characterization of Recombinant SARS-CoV-2 Spike Proteins	87
Trapped Ion Mobility Spectrometry and Parallel Accumulation–Serial Fragmentation in Proteomics	85
Data, Reagents, Assays and Merits of Proteomics for SARS-CoV-2 Research and Testing	78
Recent Advances in Software Tools for More Generic and Precise Intact Glycopeptide Analysis	71
Metabolic Perturbation Associated With COVID-19 Disease Severity and SARS-CoV-2 Replication	67
Proteome Turnover in the Spotlight: Approaches, Applications, and Perspectives	66
Meta-heterogeneity: Evaluating and Describing the Diversity in Glycosylation Between Sites on the Same Glycoprotein	62
Imaging Mass Spectrometry and Lectin Analysis of N-Linked Glycans in Carbohydrate Antigen–Defined Pancreatic Cancer Tissues	58
PTM-Shepherd: Analysis and Summarization of Post-Translational and Chemical Modifications From Open Search Results	57
An Introduction to Advanced Targeted Acquisition Methods	57
Quantitative Proteomics Identifies Proteins Enriched in Large and Small Extracellular Vesicles	56

Recent Advances in Analytical Approaches for Glycan and Glycopeptide Quantitation	56
Rapid and In-Depth Coverage of the (Phospho-)Proteome With Deep Libraries and Optimal Window Design for dia-PASEF	54
Changes in the Oligodendrocyte Progenitor Cell Proteome with Ageing	54
Proteome Profiling of Recombinant DNase Therapy in Reducing NETs and Aiding Recovery in COVID-19 Patients	54
Sensitive Immunopeptidomics by Leveraging Available Large-Scale Multi-HLA Spectral Libraries, Data-Independent Acquisition, and MS/MS Prediction	52
In-depth Site-specific Analysis of N-glycoproteome in Human Cerebrospinal Fluid and Glycosylation Landscape Changes in Alzheimer's Disease	51
Real-Time Search-Assisted Acquisition on a Tribrid Mass Spectrometer Improves Coverage in Multiplexed Single-Cell Proteomics	46
Developments and Applications of Functional Protein Microarrays	46
Accurate MS-based Rab10 Phosphorylation Stoichiometry Determination as Readout for LRRK2 Activity in Parkinson's Disease	44
Serum Protein Profiling Reveals a Landscape of Inflammation and Immune Signaling in Early-stage COVID-19 Infection	43
N-Glycomic Signature of Stage II Colorectal Cancer and Its Association With the Tumor Microenvironment	43
Robust Summarization and Inference in Proteome-wide Label-free Quantification	41
Proteomic Landscape of Exosomes Reveals the Functional Contributions of CD151 in Triple-Negative Breast Cancer	41
The Complexity and Dynamics of the Tissue Glycoproteome Associated With Prostate Cancer Progression	40
The Role of Data-Independent Acquisition for Glycoproteomics	39
Quantitative Profiling of the Human Substantia Nigra Proteome from Laser-capture Microdissected FFPE Tissue	39
Interspecies Differences in Proteome Turnover Kinetics Are Correlated With Life Spans and Energetic Demands	39
MS2Rescore: Data-Driven Rescoring Dramatically Boosts Immunopeptide Identification Rates	38
A Cross-linking Mass Spectrometry Approach Defines Protein Interactions in Yeast Mitochondria	38
Uncovering the Depths of the Human Proteome: Antibody-based Technologies for Ultrasensitive Multiplexed Protein Detection and Quantification	38
Scaling Up Single-Cell Proteomics	38
Evaluation and Refinement of Sample Preparation Methods for Extracellular Matrix Proteome Coverage	37
The CEP5 Peptide Promotes Abiotic Stress Tolerance, As Revealed by Quantitative Proteomics, and Attenuates the AUX/IAA Equilibrium in Arabidopsis	36
HIGD2A is Required for Assembly of the COX3 Module of Human Mitochondrial Complex IV	35
An Expanding Repertoire of Protein Acylations	35
Benefits of Collisional Cross Section Assisted Precursor Selection (caps-PASEF) for Cross-linking Mass Spectrometry	35
Multi-Omics Profiling for Health	34
Organellar Maps Through Proteomic Profiling – A Conceptual Guide	34
Ethical Principles, Constraints, and Opportunities in Clinical Proteomics	34
Investigation of Inter- and Intratumoral Heterogeneity of Glioblastoma Using TOF-SIMS	34
Profiling Cell Signaling Networks at Single-cell Resolution	32
Optimized Liquid and Gas Phase Fractionation Increases HLA-Peptidome Coverage for Primary Cell and Tissue Samples	32
Dysregulation of Exosome Cargo by Mutant Tau Expressed in Human-induced Pluripotent Stem Cell (iPSC) Neurons Revealed by Proteomics Analyses	32
Accelerating the Field of Epigenetic Histone Modification Through Mass Spectrometry–Based Approaches	31
Spectral Prediction Features as a Solution for the Search Space Size Problem in Proteogenomics	31
High-Throughput and Site-Specific N-Glycosylation Analysis of Human Alpha-1-Acid Glycoprotein Offers a Great Potential for New Biomarker Discovery	30
Decreased Immunoglobulin G Core Fucosylation, A Player in Antibody-dependent Cell-mediated Cytotoxicity, is Associated with Autoimmune Thyroid Diseases	30
Age-Associated Proteomic Signatures and Potential Clinically Actionable Targets of Colorectal Cancer	29
ProAlanase is an Effective Alternative to Trypsin for Proteomics Applications and Disulfide Bond Mapping	29
Human Hepatocyte Nuclear Factor 4-α Encodes Isoforms with Distinct Transcriptional Functions	29
Phosphotyrosine-based Phosphoproteomics for Target Identification and Drug Response Prediction in AML Cell Lines	29
Integrated Glycoproteomics Identifies a Role of N-Glycosylation and Galectin-1 on Myogenesis and Muscle Development	29
Glycomics, Glycoproteomics, and Glycogenomics: An Inter-Taxa Evolutionary Perspective	28
Pitfalls in HLA Ligandomics—How to Catch a Li(e)gand	28
The DNA Sensor cGAS is Decorated by Acetylation and Phosphorylation Modifications in the Context of Immune Signaling	28
Open Database Searching Enables the Identification and Comparison of Bacterial Glycoproteomes without Defining Glycan Compositions Prior to Searching	28
Developments in Mass Spectrometry for Glycosaminoglycan Analysis: A Review	28
Differential Complex Formation via Paralogs in the Human Sin3 Protein Interaction Network	27
MHC Class I Immunopeptidome: Past, Present, and Future	27
Discovery of a Redox Thiol Switch: Implications for Cellular Energy Metabolism	27

Proteomic Signature of Host Response to SARS-CoV-2 Infection in the Nasopharynx	27
Systematic Proteome and Lysine Succinylome Analysis Reveals Enhanced Cell Migration by Hyposuccinylation in Esophageal Squamous Cell Carcinoma	27
Selection of Features with Consistent Profiles Improves Relative Protein Quantification in Mass Spectrometry Experiments	26
Simple But Efficacious Enrichment of Integral Membrane Proteins and Their Interactions for In-Depth Membrane Proteomics	26
Molecular Dynamics Simulation-assisted Ionic Liquid Screening for Deep Coverage Proteome Analysis	26
Antibody Binding Epitope Mapping (AbMap) of Hundred Antibodies in a Single Run	26
Are There Indeed Spliced Peptides in the Immunopeptidome?	25
Ten Years of Extracellular Matrix Proteomics: Accomplishments, Challenges, and Future Perspectives	25
Peak Filtering, Peak Annotation, and Wildcard Search for Glycoproteomics	25
Deeply Mining a Universe of Peptides Encoded by Long Noncoding RNAs	25
Seminal Plasma Proteome as an Indicator of Sperm Dysfunction and Low Sperm Motility in Chickens	25
Immunopeptidomic Analysis Reveals That Deamidated HLA-bound Peptides Arise Predominantly from Deglycosylated Precursors	25
Reflections on the HUPO Human Proteome Project, the Flagship Project of the Human Proteome Organization, at 10 Years	25
Data Management of Sensitive Human Proteomics Data: Current Practices, Recommendations, and Perspectives for the Future	25
The Aspergillus fumigatus Secretome Alters the Proteome of Pseudomonas aeruginosa to Stimulate Bacterial Growth: Implications for Co-infection	24
Characterization of Signaling Pathways Associated with Pancreatic β-cell Adaptive Flexibility in Compensation of Obesity-linked Diabetes in db/db Mice	24
Mutation-independent Proteomic Signatures of Pathological Progression in Murine Models of Duchenne Muscular Dystrophy	24
Peptide-based Interaction Proteomics	24
Identification of Microorganisms by Liquid Chromatography-Mass Spectrometry (LC-MS1) and in Silico Peptide Mass Libraries	24
Quantitative Proteomics of Human Heart Samples Collected In Vivo Reveal the Remodeled Protein Landscape of Dilated Left Atrium Without Atrial Fibrillation	24
Synchro-PASEF Allows Precursor-Specific Fragment Ion Extraction and Interference Removal in Data-Independent Acquisition	23
Subcellular Transcriptomics and Proteomics: A Comparative Methods Review	23
Quantitative Consequences of Protein Carriers in Immunopeptidomics and Tyrosine Phosphorylation MS2 Analyses	23
In-Depth Characterization of the Staphylococcus aureus Phosphoproteome Reveals New Targets of Stk1	23
Quantitative Proteomics Reveals that the OGT Interactome Is Remodeled in Response to Oxidative Stress	23
Novel Antibodies for the Simple and Efficient Enrichment of Native O-GlcNAc Modified Peptides	23
MS-Based Proteomics of Body Fluids: The End of the Beginning	23
Early Prediction of COVID-19 Patient Survival by Targeted Plasma Multi-Omics and Machine Learning	22
Proteomics Profiling of Human Synovial Fluid Suggests Increased Protein Interplay in Early-Osteoarthritis (OA) That Is Lost in Late-Stage OA	22
Precision Neoantigen Discovery Using Large-scale Immunopeptidomes and Composite Modeling of MHC Peptide Presentation	22
Methods for Enrichment and Assignment of N-Acetylglucosamine Modification Sites	22
Immunopeptidomic Analyses of Colorectal Cancers With and Without Microsatellite Instability	22
Plasma Proteomes Can Be Reidentifiable and Potentially Contain Personally Sensitive and Incidental Findings	22
CIITA-Transduced Glioblastoma Cells Uncover a Rich Repertoire of Clinically Relevant Tumor-Associated HLA-II Antigens	22
AlphaTims: Indexing Trapped Ion Mobility Spectrometry–TOF Data for Fast and Easy Accession and Visualization	22
In-Depth Matrisome and Glycoproteomic Analysis of Human Brain Glioblastoma Versus Control Tissue	21
Isolation of Acetylated and Unmodified Protein N-Terminal Peptides by Strong Cation Exchange Chromatographic Separation of TrypN-Digested Peptides	21
Kir2.1 Interactome Mapping Uncovers PKP4 as a Modulator of the Kir2.1-Regulated Inward Rectifier Potassium Currents	21
Structural Investigations of Human A2M Identify a Hollow Native Conformation That Underlies Its Distinctive Protease-Trapping Mechanism	21
A Mouse Brain-based Multi-omics Integrative Approach Reveals Potential Blood Biomarkers for Ischemic Stroke	20
Quantitative Proteomic and Metabolomic Profiling Reveals Altered Mitochondrial Metabolism and Folate Biosynthesis Pathways in the Aging Drosophila Eye	20
The Mouse Heart Mitochondria N Terminome Provides Insights into ClpXP-Mediated Proteolysis	20
Identification of Endogenous Kinase Substrates by Proximity Labeling Combined with Kinase Perturbation and Phosphorylation Motifs	20
PolySTest: Robust Statistical Testing of Proteomics Data with Missing Values Improves Detection of Biologically Relevant Features	20
The Circadian Clock Gene Circuit Controls Protein and Phosphoprotein Rhythms in Arabidopsis thaliana	20
Region-Specific Cell Membrane N-Glycome of Functional Mouse Brain Areas Revealed by nanoLC-MS Analysis	20
Examining and Fine-tuning the Selection of Glycan Compositions with GlyConnect Compozitor	19
Thyroglobulin Interactome Profiling Defines Altered Proteostasis Topology Associated With Thyroid Dyshormonogenesis	19
Enabling Photoactivated Cross-Linking Mass Spectrometric Analysis of Protein Complexes by Novel MS-Cleavable Cross-Linkers	19
Citrus Vascular Proteomics Highlights the Role of Peroxidases and Serine Proteases during Huanglongbing Disease Progression	19
Proteomic Dissection of the Impact of Environmental Exposures on Mouse Seminal Vesicle Function	19
Comparative Proteome Signatures of Trace Samples by Multiplexed Data-Independent Acquisition	19
Proteomics, Lipidomics, Metabolomics, and 16S DNA Sequencing of Dental Plaque From Patients With Diabetes and Periodontal Disease	19
Glycoproteomics Landscape of Asymptomatic and Symptomatic Human Alzheimer’s Disease Brain	18
A Novel Mechanism for NF-κB-activation via IκB-aggregation: Implications for Hepatic Mallory-Denk-Body Induced Inflammation	18
Precision Glycoproteomics Reveals Distinctive N-Glycosylation in Human Spermatozoa	18
Mass Spectrometric and Glycan Microarray–Based Characterization of the Filarial Nematode Brugia malayi Glycome Reveals Anionic and Zwitterionic Glycan Antigens	18
Feature Selection Methods for Protein Biomarker Discovery from Proteomics or Multiomics Data	18
The Choice of Search Engine Affects Sequencing Depth and HLA Class I Allele-Specific Peptide Repertoires	18
Depolarization-dependent Induction of Site-specific Changes in Sialylation on N-linked Glycoproteins in Rat Nerve Terminals	18
Separation and Identification of Permethylated Glycan Isomers by Reversed Phase NanoLC-NSI-MSn	18
Proteomics-Based Insights Into the SARS-CoV-2–Mediated COVID-19 Pandemic: A Review of the First Year of Research	17
SP3-Enabled Rapid and High Coverage Chemoproteomic Identification of Cell-State–Dependent Redox-Sensitive Cysteines	17
Mass Spectrometry–Based Proteomics Analysis of Human Substantia Nigra From Parkinson's Disease Patients Identifies Multiple Pathways Potentially Involved in the Disease	17
Quantitative Metaproteomics and Activity-based Protein Profiling of Patient Fecal Microbiome Identifies Host and Microbial Serine-type Endopeptidase Activity Associated With Ulcerative Colitis	17
Sulconazole Induces PANoptosis by Triggering Oxidative Stress and Inhibiting Glycolysis to Increase Radiosensitivity in Esophageal Cancer	17
Integrated Systems Analysis of the Murine and Human Pancreatic Cancer Glycomes Reveals a Tumor-Promoting Role for ST6GAL1	17
Proteogenomic Analysis Unveils the HLA Class I-Presented Immunopeptidome in Melanoma and EGFR-Mutant Lung Adenocarcinoma	17
Prediction and Validation of Mouse Meiosis-Essential Genes Based on Spermatogenesis Proteome Dynamics	17
Multiattribute Glycan Identification and FDR Control for Glycoproteomics	17
Multisample Mass Spectrometry-Based Approach for Discovering Injury Markers in Chronic Kidney Disease	17
Sensitive and Quantitative Detection of MHC-I Displayed Neoepitopes Using a Semiautomated Workflow and TOMAHAQ Mass Spectrometry	17
The Secretome Profiling of a Pediatric Airway Epithelium Infected with hRSV Identified Aberrant Apical/Basolateral Trafficking and Novel Immune Modulating (CXCL6, CXCL16, CSF3) and Antiviral (CEACAM1)	17
Global Proteome and Phosphoproteome Characterization of Sepsis-induced Kidney Injury	16
Assessing the Preanalytical Variability of Plasma and Cerebrospinal Fluid Processing and Its Effects on Inflammation-Related Protein Biomarkers	16
New Views of Old Proteins: Clarifying the Enigmatic Proteome	16
Harmonizing Labeling and Analytical Strategies to Obtain Protein Turnover Rates in Intact Adult Animals	16
Measuring Site-specific Glycosylation Similarity between Influenza a Virus Variants with Statistical Certainty	16
A Universal Peptide Matrix Interactomics Approach to Disclose Motif-Dependent Protein Binding	16
Mapping Isoform Abundance and Interactome of the Endogenous TMPRSS2-ERG Fusion Protein by Orthogonal Immunoprecipitation–Mass Spectrometry Assays	16

Modulation of Natural HLA-B*27:05 Ligandome by Ankylosing Spondylitis-associated Endoplasmic Reticulum Aminopeptidase 2 (ERAP2)	15
Perlecan Knockdown Significantly Alters Extracellular Matrix Composition and Organization During Cartilage Development	15
Integrated Redox Proteomic Analysis Highlights New Mechanisms of Sensitivity to Silver Nanoparticles	15
Quantitative Proteomics Links the LRRC59 Interactome to mRNA Translation on the ER Membrane	15
Comparative Host Interactomes of the SARS-CoV-2 Nonstructural Protein 3 and Human Coronavirus Homologs	15
Protein Modification Characteristics of the Malaria Parasite Plasmodium falciparum and the Infected Erythrocytes	14
Chromatin Proteomics to Study Epigenetics — Challenges and Opportunities	14
Dynamic Changes to the Skeletal Muscle Proteome and Ubiquitinome Induced by the E3 Ligase, ASB2β	14
Integrated Proteomics to Understand the Role of Neuritin (NRN1) as a Mediator of Cognitive Resilience to Alzheimer’s Disease	14
Flow-induced Reorganization of Laminin-integrin Networks Within the Endothelial Basement Membrane Uncovered by Proteomics	14
Characterization of R-Loop–Interacting Proteins in Embryonic Stem Cells Reveals Roles in rRNA Processing and Gene Expression	14
Integrated Liver and Plasma Proteomics in Obese Mice Reveals Complex Metabolic Regulation	14
Identification of an Unconventional Subpeptidome Bound to the Behçet's Disease-associated HLA-B*51:01 that is Regulated by Endoplasmic Reticulum Aminopeptidase 1 (ERAP1)	14
An Automated Nanowell-Array Workflow for Quantitative Multiplexed Single-Cell Proteomics Sample Preparation at High Sensitivity	14
An Interaction Network of RNA-Binding Proteins Involved in Drosophila Oogenesis	14
Glutamine-Fructose-6-Phosphate Transaminase 2 (GFPT2) Is Upregulated in Breast Epithelial–Mesenchymal Transition and Responds to Oxidative Stress	14
Proteomics and Metaproteomics Add Functional, Taxonomic and Biomass Dimensions to Modeling the Ecosystem at the Mucosal-luminal Interface	13
A New Parallel High-Pressure Packing System Enables Rapid Multiplexed Production of Capillary Columns	13
Proteomic Portraits Reveal Evolutionarily Conserved and Divergent Responses to Spinal Cord Injury	13
Increased Wheat Protein Content via Introgression of an HMW Glutenin Selectively Reshapes the Grain Proteome	13
An Integrated Transcriptomics and Proteomics Analysis Implicates lncRNA MALAT1 in the Regulation of Lipid Metabolism	13
Proteomic Identification of Coxiella burnetii Effector Proteins Targeted to the Host Cell Mitochondria During Infection	13
A Dynamic and Combinatorial Histone Code Drives Malaria Parasite Asexual and Sexual Development	13
Global Insights Into Lysine Acylomes Reveal Crosstalk Between Lysine Acetylation and Succinylation in Streptomyces coelicolor Metabolic Pathways	13
Identification of Novel Serological Autoantibodies in Takayasu Arteritis Patients Using HuProt Arrays	13
Automating UbiFast for High-throughput and Multiplexed Ubiquitin Enrichment	13
MS-Based HLA-II Peptidomics Combined With Multiomics Will Aid the Development of Future Immunotherapies	13
Analytical Guidelines for co-fractionation Mass Spectrometry Obtained through Global Profiling of Gold Standard Saccharomyces cerevisiae Protein Complexes	13
Ionizing Radiation-induced Proteomic Oxidation in Escherichia coli	13
TMEM67, TMEM237, and Embigin in Complex With Monocarboxylate Transporter MCT1 Are Unique Components of the Photoreceptor Outer Segment Plasma Membrane	13
Oxidative Modifications Switch Modulatory Activities of Urinary Proteins From Inhibiting to Promoting Calcium Oxalate Crystallization, Growth, and Aggregation	13
A Reductionist Approach Using Primary and Metastatic Cell–Derived Extracellular Vesicles Reveals Hub Proteins Associated with Oral Cancer Prognosis	12
Identification of Tumor Antigens in the HLA Peptidome of Patient-derived Xenograft Tumors in Mouse	12
Commentary: Are There Indeed Spliced Peptides in the Immunopeptidome?	12
Pronounced Postmating Response in the Drosophila Female Reproductive Tract Fluid Proteome	12
In-Depth Comparison of Matrigel Dissolving Methods on Proteomic Profiling of Organoids	12
Agonists of Orally Expressed TRP Channels Stimulate Salivary Secretion and Modify the Salivary Proteome	12
The Insufficient Activation of RIG-I–Like Signaling Pathway Contributes to Highly Efficient Replication of Porcine Picornaviruses in IBRS-2 Cells	12
Characterization of the AGR2 Interactome Uncovers New Players of Protein Disulfide Isomerase Network in Cancer Cells	12
Kinome Profiling of Primary Endometrial Tumors Using Multiplexed Inhibitor Beads and Mass Spectrometry Identifies SRPK1 as Candidate Therapeutic Target	12
Deciphering Spatial Protein–Protein Interactions in Brain Using Proximity Labeling	12
Quantitative Data-Independent Acquisition Glycoproteomics of Sparkling Wine	12
Proteomics of Campylobacter jejuni Growth in Deoxycholate Reveals Cj0025c as a Cystine Transport Protein Required for Wild-type Human Infection Phenotypes	12
OpenPepXL: An Open-Source Tool for Sensitive Identification of Cross-Linked Peptides in XL-MS	12
Interactome Analysis of Human Phospholipase D and Phosphatidic Acid-Associated Protein Network	12
Proteaphagy in Mammalian Cells Can Function Independent of ATG5/ATG7	12
Proteome Landscape of Epithelial-to-Mesenchymal Transition (EMT) of Retinal Pigment Epithelium Shares Commonalities With Malignancy-Associated EMT	12
Prospective on Imaging Mass Spectrometry in Clinical Diagnostics	12
Slight Deuterium Enrichment in Water Acts as an Antioxidant: Is Deuterium a Cell Growth Regulator?	12
Unraveling the MAX2 Protein Network in Arabidopsis thaliana: Identification of the Protein Phosphatase PAPP5 as a Novel MAX2 Interactor	11
Proteome-wide Analysis Reveals Substrates of E3 Ligase RNF146 Targeted for Degradation	11
Reanalysis of ProteomicsDB Using an Accurate, Sensitive, and Scalable False Discovery Rate Estimation Approach for Protein Groups	11
Proteomic Analyses Identify Differentially Expressed Proteins and Pathways Between Low-Risk and High-Risk Subtypes of Early-Stage Lung Adenocarcinoma and Their Prognostic Impacts	11
Novel Proteomic Profiling of Epididymal Extracellular Vesicles in the Domestic Cat Reveals Proteins Related to Sequential Sperm Maturation with Differences Observed between Normospermic and Teratosper	11
Protein Phosphorylation in Depolarized Synaptosomes: Dissecting Primary Effects of Calcium from Synaptic Vesicle Cycling	11
The Mechanism of NEDD8 Activation of CUL5 Ubiquitin E3 Ligases	11
Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner	11
Single-Cell Quantitative Proteomic Analysis of Human Oocyte Maturation Revealed High Heterogeneity in In Vitro–Matured Oocytes	11
Limited Evidence for Protein Products of Noncoding Transcripts in the HEK293T Cellular Cytosol	11
Temporal Quantitative Proteomics of mGluR-induced Protein Translation and Phosphorylation in Neurons	11
Multiomics Reveals Ectopic ATP Synthase Blockade Induces Cancer Cell Death via a lncRNA-mediated Phospho-signaling Network	11
Oxonium Ion–Guided Optimization of Ion Mobility–Assisted Glycoproteomics on the timsTOF Pro	11
Domain Mapping of Chondroitin/Dermatan Sulfate Glycosaminoglycans Enables Structural Characterization of Proteoglycans	11
Integrated Application of Multiomics Strategies Provides Insights Into the Environmental Hypoxia Response in Pelteobagrus vachelli Muscle	11
MHC Phosphopeptides: Promising Targets for Immunotherapy of Cancer and Other Chronic Diseases	11