OOIR: Observatory of International Research

Papers

(The H4-Index of IEEE-ACM Transactions on Computational Biology and Bioinformatics is 41. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-05-01 to 2026-05-01.)

Article	Citations
Contrasting Multi-Source Temporal Knowledge Graphs for Biomedical Hypothesis Generation	174
Data-Driven and Knowledge-Based Algorithms for Gene Network Reconstruction on High-Dimensional Data	140
New Labeling Methods for Deep Learning Real-Valued Inter-Residue Distance Prediction	107
Modality-DTA: Multimodality Fusion Strategy for Drug–Target Affinity Prediction	102
ELMo4m6A: A Contextual Language Embedding-Based Predictor for Detecting RNA N6-Methyladenosine Sites	98
scBKAP: A Clustering Model for Single-Cell RNA-Seq Data Based on Bisecting K-Means	93
Graph Convolutional Auto-Encoders for Predicting Novel lncRNA-Disease Associations	82
Analysis of Cancer-Associated Mutations of POLB Using Machine Learning and Bioinformatics	82
VMF-SSD: A Novel V-Space Based Multi-Scale Feature Fusion SSD for Apple Leaf Disease Detection	80
An Effective Swarm Intelligence Optimization Algorithm for Flexible Ligand Docking	79
IPP: An Intelligent Privacy-Preserving Scheme for Detecting Interactions in Genome Association Studies	79
Protein-Protein Interaction Sites Prediction Using Batch Normalization Based CNNs and Oversampling Method Borderline-SMOTE	77
Gene Co-Expression Networks Offer New Perspectives on Sepsis Pathophysiology	76
An Ensemble Tf-Idf Based Approach to Protein Function Prediction via Sequence Segmentation	76
Prediction of circRNA-MiRNA Association Using Singular Value Decomposition and Graph Neural Networks	63
Prediction of Transcription Factor Binding Sites With an Attention Augmented Convolutional Neural Network	63
The Determination of Distinctive Single Nucleotide Polymorphism Sets for the Diagnosis of Behçet's Disease	58
IGNSCDA: Predicting CircRNA-Disease Associations Based on Improved Graph Convolutional Network and Negative Sampling	56
Seq-BEL: Sequence-Based Ensemble Learning for Predicting Virus-Human Protein-Protein Interaction	56
Hybrid Projective Synchronization via PI Controller Based on DNA Strand Displacement	55
Fine-Grained Lesion Classification Framework for Early Auxiliary Diagnosis	55
PseU-KeMRF: A Novel Method for Identifying RNA Pseudouridine Sites	54
Predator: Predicting the Impact of Cancer Somatic Mutations on Protein-Protein Interactions	53
Improving Biomedical Question Answering by Data Augmentation and Model Weighting	51
Subgroup Identification Using Virtual Twins for Human Microbiome Studies	50

SGNet: Sequence-Based Convolution and Ligand Graph Network for Protein Binding Affinity Prediction	49
Blockchain-Based Data Access Security Solutions for Medical Wearables	49
Automated Spot Counting in Microbiology	48
PSPGO: Cross-Species Heterogeneous Network Propagation for Protein Function Prediction	48
WVDL: Weighted Voting Deep Learning Model for Predicting RNA-Protein Binding Sites	47
Minimum Functional Length Analysis of K-Mer Based on BPNN	47
An Approach of Epistasis Detection Using Integer Linear Programming Optimizing Bayesian Network	47
Robust and Privacy-Preserving Decentralized Deep Federated Learning Training: Focusing on Digital Healthcare Applications	46
Spatial Stochastic Model of the Pre-B Cell Receptor	46
A Multi-Task Deep Feature Selection Method for Brain Imaging Genetics	44
RNPredATC: A Deep Residual Learning-Based Model With Applications to the Prediction of Drug-ATC Code Association	43
State Observer Design of Coupled Genetic Regulatory Networks With Reaction-Diffusion Terms via Time-Space Sampled-Data Communications	43
A Neighborhood-Based Global Network Model to Predict Drug-Target Interactions	42
NMTF-DTI: A Nonnegative Matrix Tri-factorization Approach With Multiple Kernel Fusion for Drug-Target Interaction Prediction	41
Self-Supervised Learning for Label Sparsity in Computational Drug Repositioning	41
TransCrispr: Transformer Based Hybrid Model for Predicting CRISPR/Cas9 Single Guide RNA Cleavage Efficiency	41
Feature Fusion GAN Based Virtual Staining on Plant Microscopy Images	41