Epigenetics

Papers
(The TQCC of Epigenetics is 9. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-10-01 to 2025-10-01.)
ArticleCitations
N6-methyladenosine methylation analysis of long noncoding RNAs and mRNAs in 5-FU-resistant colon cancer cells73
Co-occurrence of injection drug use and hepatitis C increases epigenetic age acceleration that contributes to all-cause mortality among people living with HIV49
Leukocyte DNA methylation in Alzheimer´s disease associated genes: replication of findings from neuronal cells36
Placental DNA methylation in pregnancies complicated by maternal diabetes and/or obesity: State of the art and research gaps34
Role of N6-methyladenosine-related lncRnas in pseudoexfoliation glaucoma32
Transcriptional signature of cardiac myocyte recovery in mice and human reveals persistent upregulation of epigenetic factors29
Differential methylation patterns in cord blood associated with prenatal exposure to neighborhood crime: an epigenome-wide association study and regional analysis26
Identification and functional characterisation of DNA methylation differences between East- and West-originating Finns25
GGNBP2 regulates histone ubiquitination and methylation in spermatogenesis25
Epigenetic landscape of 5-hydroxymethylcytosine and associations with gene expression in placenta22
Using methylation data to improve transcription factor binding prediction22
Digital methylation assessments of alcohol and cigarette consumption account for common variance in accelerated epigenetic ageing21
Generational stability of epigenetic transgenerational inheritance facilitates adaptation and evolution21
Placental malaria induces a unique methylation profile associated with fetal growth restriction20
A novel lncRNA, Lnc21q22.11, suppresses gastric cancer growth by inhibiting MEK/ERK pathway20
Detailed immune profiling in pediatric Crohn’s disease using methylation cytometry20
Proposal of a bioinformatics approach to predict molecular mechanisms involved in inflammatory response: case of ATRA and 1,25(OH) 2 D in adipocytes20
The influence of intergenerational trauma on epigenetics and obesity in Indigenous populations - a scoping review20
Differential methylation pattern in pubertal girls associated with biochemical premature adrenarche19
Mechanism of crosstalk between DNA methylation and histone acetylation and related advances in diagnosis and treatment of premature ovarian failure18
Accelerated epigenetic age at birth and child emotional and behavioural development in early childhood: a meta-analysis of four prospective cohort studies in ECHO18
Multiomics analysis of adaptation to repeated DNA damage in prostate cancer cells18
CircRNF111 Contributes to Adipocyte Differentiation by Elevating PPARγ Expression via miR-27a-3p18
Epigenome-wide association study of loneliness in a sample of U.S. middle-aged twins18
Mendelian randomization analysis of CpG methylation and immune phenotypes in epithelial ovarian cancer outcomes17
Acetaldehyde-driven mRNA methylation and expression changes in ethanol-metabolizing enzyme genes17
Identification and characterization of extrachromosomal circular DNA in patients with high myopia and cataract17
Identification cloning and functional analysis of novel natural antisense lncRNA CFL1-AS1 in cattle17
Genomic context determines the effect of DNA methylation on gene expression in the gut epithelium of Atlantic salmon ( Salmo salar )17
The UHRF1 protein is a key regulator of retrotransposable elements and innate immune response to viral RNA in human cells16
MYCN and HIF-1 directly regulate TET1 expression to control 5-hmC gains and enhance neuroblastoma cell migration in hypoxia16
ACMSD methylation in peripheral blood is associated with dynamic functional connectivity pattern in adolescent MDD patients16
PIK3R1 and G0S2 are human placenta-specific imprinted genes associated with germline-inherited maternal DNA methylation15
Direction-aware functional class scoring enrichment analysis of infinium DNA methylation data15
Polymethylation scores for prenatal maternal smoke exposure persist until age 15 and are detected in saliva in the Fragile Families and Child Wellbeing cohort15
Integration of miRNA expression analysis of purified leukocytes and whole blood reveals blood-borne candidate biomarkers for lung cancer14
ELOVL2-AS1 suppresses tamoxifen resistance by sponging miR-1233-3p in breast cancer14
Regulatory networks of circRNA- centred ceRNAs in sepsis-induced acute kidney injury14
Blood DNA methylation signatures are associated with social determinants of health among survivors of childhood cancer14
Placental and immune cell DNA methylation reference panel for bulk tissue cell composition estimation in epidemiological studies14
Selenium-associated differentially expressed microRNAs and their targeted mRNAs across the placental genome in two U.S. birth cohorts14
Validation of the new EPIC DNA methylation microarray (900K EPIC v2) for high-throughput profiling of the human DNA methylome14
Pan-precancer and cancer DNA methylation profiles revealed significant tissue specificity of interrupted biological processes in tumorigenesis14
CircRIMKLB promotes myoblast proliferation and inhibits differentiation by sponging miR-29c to release KCNJ1213
Upregulation of KHDC1L promotes the proliferation and inhibits apoptosis in head and neck squamous cell carcinoma13
The role of histone methyltransferases in therapeutic resistance of NSCLC13
Timing of dietary effects on the epigenome and their potential protective effects against toxins13
Cut&tag: a powerful epigenetic tool for chromatin profiling13
CpG island demethylation and recruitment of SP1 to the promoter region regulates human thymic stromal lymphopoietin expression13
Associations between infant sex and DNA methylation across umbilical cord blood, artery, and placenta samples13
Direct bisulphite conversion of cervical samples for DNA methylation analysis13
The role of DNA methylation on gene expression in the vertebrae of ancestrally benzo[a]pyrene exposed F1 and F3 male medaka13
Cumulative stress, PTSD, and emotion dysregulation during pregnancy and epigenetic age acceleration in Hispanic mothers and their newborn infants12
The one-carbon metabolism as an underlying pathway for placental DNA methylation – a systematic review12
RNA modification m 6 Am: the role in cardiac biology12
Long non-coding RNA Gm10561 promotes myogenesis by sponging miR-43212
Large-scale integration of DNA methylation and gene expression array platforms identifies both cis and trans relationships12
DNA methylation at birth and fine motor ability in childhood: an epigenome-wide association study with replication12
Tributyltin chloride alters the structural, genomic, and epigenomic integrity of postejaculatory mammalian sperm12
Comprehensive analysis of m 6 A methylomes in idiopathic pulmonary arterial hypertension12
Chemotherapy-induced acceleration of DNA methylation-based biological age in breast cancer12
mir152hypomethylation as a mechanism for non-syndromic cleft lip and palate11
Research progress on the mechanism of tumor cell ferroptosis regulation by epigenetics11
Upregulation of GPR133 expression impaired the phagocytosis of macrophages in recurrent spontaneous miscarriage11
Detecting aberrant DNA methylation in Illumina DNA methylation arrays: a toolbox and recommendations for its use11
Analysis of global DNA methylation and epigenetic modifiers (DNMTs and HDACs) in human foetal endothelium exposed to gestational and type 2 diabetes11
DNMT1 expression partially dictates 5-Azacytidine sensitivity and correlates with RAS/MEK/ERK activity in gastric cancer cells11
DNA methylation changes in glial cells of the normal-appearing white matter in Multiple Sclerosis patients11
Heavy alcohol consumption but not smoking predicts mortality in patients with acute coronary syndrome11
Hypomethylation at H19DMR in penile squamous cell carcinoma is not related to HPV infection11
Dietary and supplemental intake of vitamins C and E is associated with altered DNA methylation in an epigenome-wide association study meta-analysis11
Alterations in DNA methylation associate with fatty liver and metabolic abnormalities in a multi-ethnic cohort of pre-teenage children11
DNA methylation profiles in bovine sperm are associated with daughter fertility11
Assessment of aberrant DNA methylation two years after paediatric critical illness: a pre-planned secondary analysis of the international PEPaNIC trial11
NSUN2-mediated RNA m5C modification modulates uveal melanoma cell proliferation and migration10
Epigenetic age acceleration, neonatal morbidities, and neurobehavioral profiles in infants born very preterm10
Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin10
Higher sperm H3K4me3 levels are associated with idiopathic recurrent pregnancy loss10
DNA methylation and bronchiectasis: a Mendelian randomization analysis to investigate causal link and therapeutic target10
Biological stability of DNA methylation measurements over varying intervals of time and in the presence of acute stress10
Epigenome wide association study in peripheral blood of pregnant women identifies potential metabolic pathways related to gestational diabetes10
m6A reader YTHDC2 mediates NCOA4 mRNA stability affecting ferritinophagy to alleviate secondary injury after intracerebral haemorrhage10
Prenatal Socioeconomic Disadvantage and Epigenetic Alterations at Birth Among Children Born to White British and Pakistani Mothers in the Born in Bradford Study10
Detection of DNA methylation from buccal swabs using nanopore sequencing to study stunting10
DNA-based cell typing in menstrual effluent identifies cell type variation by sample collection method: toward noninvasive biomarker development for women’s health10
Study on chromatin regulation patterns of expression vectors in the PhiC31 integration site10
Gaps in current methods to detect polymorphic CpGs from Illumina Infinium human methylation microarrays and exploring their potential impact in multi-EWAS analyses10
Comparative genomic analyses reveal evidence for adaptive A-to-I RNA editing in insect Adar gene10
Dynamics of methylated cell-free DNA in the urine of non-small cell lung cancer patients10
Advancements in DNA methylation technologies and their application in cancer diagnosis10
Methylome profile of medaka eggs and sperm10
ΔNp63α-mediated epigenetic regulation in keratinocyte senescence10
Memory B-cell like chronic lymphocytic leukaemia is associated with specific methylation profile of WNT5A promoter and undetectable expression of WNT5A gene9
Precise epigenomic editing with a SunTag-based modular epigenetic toolkit9
Time-course full profiling of circulating miRNAs in neurologically deceased organ donors: a proof of concept study to understand the onset of the cytokine storm9
Genetic and epigenetic analysis of the serotonin 2A receptor in the context of cocaine abuse9
Glucocorticoid receptor epigenetic activity in the heart9
DNA methylation biomarkers to identify epigenetically abnormal spermatozoa in male partners from couples experiencing recurrent pregnancy loss9
Uncertainty quantification of reference-based cellular deconvolution algorithms9
Circ_0003747 promotes thyroid cancer progression by sponging miR-338-3p to upregulate PLCD3 expression9
Comparison of EM-seq and PBAT methylome library methods for low-input DNA9
History of exposure to copper influences transgenerational gene expression responses in Daphnia magna9
Methylation of FKBP5 is associated with accelerated DNA methylation ageing and cardiometabolic risk: replication in young-adult and middle-aged Black Americans9
A novel principal component based method for identifying differentially methylated regions in Illumina Infinium MethylationEPIC BeadChip data9
Stress-induced epigenetic effects driven by maternal lactation in dairy cattle: a comethylation network approach9
Oleic acid-related anti-inflammatory effects in force-stressed PdL fibroblasts are mediated by H3 lysine acetylation associated with altered IL10 expression9
Epigenome-wide meta-analysis of prenatal vitamin D insufficiency and cord blood DNA methylation9
Sex-based differences in placental DNA methylation profiles related to gestational age: an NIH ECHO meta-analysis9
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