Current Proteomics

Article	Citations
S100A8 and S100A9–Critical Mediators of Inflammation in Arthritis	27
Cloning, Expression and Biochemical Characterization of the Recombinant α-amylase from Bacillus subtilis YX48	12
Preface	11
Exploration of atractylenolide III targeting MDM2/p53 axis in breast cancer cell progression based on network pharmacology, molecular docking and ubiquitination analysis	11
Random Walks on Biomedical Networks	7
Characterization of a New Hypotensive Peptide from the Venom of Snake Bothrops jararaca (Bj)	6
StemRegenin-1 Reverses Drug Resistance of MCF-7/ADR Cells via AhR/ABC Transports and AhR/UGTs Pathways	5
The Effect of N52R Mutation at the SPN-ARR Interface on the Conformational Dynamics of SHANK3	5
Pilot Study of the Ex Vivo Blood Leukocytes’ Proteomic Response to Prednisone Stimulation in Corticosteroid-responsive Asthma	4
Proteomic Analysis of the Molecular Mechanisms of Chlorpromazine Inhibiting Migration of Oral Squamous Cell Carcinoma	4
Evaluation of the Binding Affinity of a Gonadotropin-Releasing Hormone Analogue (GnRH-a) Buserelin through In silico and In vivo Testing in Clarias magur	4
Identifying Protein Subcellular Location with Embedding Features Learned from Networks	4
LINC00839, LINC01671, AC093673 and AC008760 are Associated with the Prognosis and Immune Infiltration of Clear-cell Renal Cell Carcinoma	4
Deep Learning for the Prediction of Protein Sequence, Structure, Function, and Interaction: Applications, Challenges, and Future Directions	4
Acknowledgements to Reviewers	4
Identifying Prostaglandin D2 Synthase in Urine: A Potential Biomarker for Bladder Cancer	3
Agar-Agar Matrix-Mediated Immobilization for Enhanced Catalytic Behavior and Stability of 1,4-α-D-Glucan Glucanohydrolase Obtained from Halotolerant Micrococcus spp. K11	3
Identification of a Ubiquitination‑Related Signature for Ovarian Cancer Based on 101 Combinations of Machine Learning Methods	3
Prediction of Nitration Sites Based on FCBF Method and Stacking Ensemble Model	3
Identification of Novel Biomarkers for Post-Kasai Portoenterostomy in Biliary Atresia through Shotgun Proteomics Analysis	3
miR-124 in Neuroblastoma: Mechanistic Insights, Biomarker Potential, and Therapeutic Prospects	3
Machine Learning-Based Virtual Screening Strategy RevealsSome Natural Compounds as Potential PAK4 Inhibitors in Triple Negative Breast Cancer	3
Bioinformatics Method Predicts Hantavirus Disrupts Vascular Permeability to Invade Cells Violently by Fibrocystin Hydrolase and PTEN/Gtpase-Like System	3
Meet the Editorial Board Member	3
RNA Sequencing of A2780 Cells Treated with CCL2 Identified Genes Associated with A2780 Cell Growth	3

A Novel Platform for Protein Post-translational Modifications based on a High-density Antibody Array	2
In Vitro and In Silico Evaluation of Caffeic and Ferulic Acids Involvement in the Translocation of Glucose Transporter 4	2
Comparison of Structural Stability of Monomeric and Dimeric Forms of Bovine Seminal Ribonuclease Using Molecular Dynamics Simulation	2
Circulating Exosomes Studied by Label-free Proteomics Analysis Reveal Transition Signatures from Diabetes Mellitus to Diabetic Kidney Disease	2
Proteomic analysis reveals the expression and impact of PRDX2 in ovarian cancer tissues	2
Proteomics and Computational Analysis of Cytosolic Proteome of a Thermoacidophilic Euryarchaeon, Picrophilus torridus	2
Identification of Novel PBP2B Protein Inhibitors against Streptococcus pneumoniae in Marine Natural Products using an In-Silico Approach	2
Structural Insight into Wild Type of Arginine Deiminase Protein and its Three Mutated Versions in Complex with Arginine Molecule: A Computational Approach	2
Critical Residues in Hsp70 Nucleotide Binding Domain for Challenges in Drug Design	2
Advances in machine learning for optimizing pharmaceutical drug discovery	2
Cytotoxic and Apoptotic Effect of Iris taochia Plant Extracts on Human Breast Cancer (MCF-7) Cells	2
Integration of Proteomic Data Obtained from the Saliva of Children with Caries through Bioinformatic Analysis	2
Evaluation of the Interaction between Ricin Protein and Quercetin using Different Analytical Methods	2
NaturePred: A Tool for Revolutionizing Natural Product Classification with Artificial Intelligence	1
Developing Multi-epitope Antigen Construct from Immunodominant Proteins for Serological Diagnosis of Chlamydia trachomatis: An In Silico Approach	1
A Bottom-Up Proteomic Approach in Bone Marrow Plasma Cells of Newly Diagnosed Multiple Myeloma Patients	1
Proteomic Profile Analysis of Pulmonary Artery in a Rat Model Under Hypoxic Pulmonary Hypertension	1
In silico Investigation on the Structural Insights into the Binding of Squalamine Inhibitor with Membrane-bound Α-Synuclein	1
Serum Proteomics Reveals Differential Proteins between Individuals with Vestibular Migraine and Healthy Subjects	1
PCM1: A Potential Prognostic Biomarker Correlated with Immune Infiltration in Lung Adenocarcinoma	1
Expression Analysis of 4-Hydroxynonenal Modified Proteins in Schizophrenia Brain; Relevance to Involvement in Redox Dysregulation	1
Proteomic Technologies and their Application for Ensuring Meat Quality, Safety and Authenticity	1
Proteomic Analysis of Aqueous Humor Proteins Associated with Neovascular Glaucoma Secondary to Proliferative Diabetic Retinopathy	1
Current Understanding of Dried Spots Platform for Blood Proteomics	1
Small Peptides Inhibition of SARS-CoV-2 Mpro via Computational Approaches	1
Analysis of Membrane Proteins of Streptomycin-Resistant Mycobacterium tuberculosis Isolates	1
Comparative Proteomic Analysis of Hydrogen Peroxide-Induced Protein Expression in Streptococcus pneumoniae D39	1
Two Novel Peptides from Buthotus saulcyi Scorpion Venom: Proteomic Analysis and Approaches	1
NSUN2/FOXM1 positive feedback pathway promotes the malignant development of non-small cell lung cancer	1
Proteomic Profiling of Maternal Serum for Early Risk Analysis of Preterm Birth	1
Proteome Profiling of Serum Exosomes from Newborns Delivered by Mothers with Preeclampsia	1
Arsenite Induced Conformational Changes and Aggregation in Human Serum Albumin (HSA) and its Prevention by Naringin	0
Predicting the Secondary Structure of Proteins: A Deep Learning Approach	0
Annotation-Based Study on Hypothetical Proteins in Bacteria Using Classification Features	0
Machine Learning for Mass Spectrometry Data Analysis in Proteomics	0
Preface	0
Exploring Phytochemical Compounds: A Computational Study for HIV-1 Reverse Transcriptase Inhibition	0
Investigating the Effectiveness of Natural Analogs and Different Metabolites of Curcumin for the Inhibition of the Influenza Virus Proteins in a Simulated Environment	0
Molecular Docking, Pharmacophore Mapping, and Virtual Screening of Novel Glucokinase Activators as Antidiabetic Agents	0
Identification of Potential Immunogenic Epitopes Against SARS-CoV-2 Using In-Silico Method: An Immunoinformatics Study	0
Designing a Novel Multi-epitope Peptide as a Potential Serodiagnosis Marker for the Diagnosis of Acinetobacter baumannii: An In silico Approach	0
The Relationship of Transposable Elements with Non-Coding RNAs in the Emergence of Human Proteins and Peptides	0
Label-free and TMT-labeled Proteomics Methods to Compare Differences on Normal and Attached Livers of Glyptosternum maculatum	0
Effects of Chronic Cold Exposure on Proteomics of Lung Tissue in Mice	0
Unraveling Major Proteins of Mycobacterium tuberculosis Envelope	0
Elucidating the therapeutic mechanisms of Angelica dahurica in knee osteoarthritis: An integrative network pharmacology and molecular docking approach	0
An Immunoinformatic Approach to Designing a Multi-epitope Vaccine against Helicobacter pylori with the VacA Toxin and BabA Adhesion	0
Osteoarthritis: Insights into Potential Causes and Biomarkers from Articular Fluid Metabonomics	0
Higher Abundance of Vitronectin (S-protein) in Serum-derived Exosomes of Pulmonary and Extra-Pulmonary Tuberculosis Patients as Compared to HIV-Tuberculosis Dual-infected Patients and Healthy Humans	0
Comprehensive Analysis of Tertiary Lymphoid Structures in Pancreatic Cancer: Molecular Characteristics and Prognostic Implications	0

Bioinformatics-Based Characterization of Proteins Related to SARS-CoV- 2 Using the Polarity Index Method® (PIM®) and Intrinsic Disorder Predisposition	0
Predicting Membrane Protein Types Based on Fusing Information Feature and Ensemble Machine Learning Model	0
Meet the Editorial Board Member	0
Identification of Potential Drug Targets for Sleep Apnea Through Mendelian Randomization	0
Proteomics, Peptidomics and Transcriptomic Analysis of the Venom from the Spider Macrothele yani (Mygalomorphae: Macrothelidae)	0
Protein Profiling of Hirudo orientalis During Different Seasons for Obtaining Accurate Results in Leech Therapy	0
M.P. Molloy	0
Meet the Editorial Board Member	0
SP1-mediated WTAP exacerbates the progression of colon adenocarcinoma by m6A methylation of KLK8	0
Unraveling Potential Candidate Targets Associated with Expression of p16INK4a or p16 Truncated Fragment by Comparative Proteomics Analysis	0
Differential Proteomic Identification and Bioinformatics Analysis of Femoral Neck in Elderly Female Patients with Hyperuricaemia	0
Multi-omics analysis reveals molecular characteristics and potential therapeutic targets of primary central nervous system lymphoma	0
ORF7a Palsies Macrophage to Worsen Diabetes by SMB/BPI/ABC Domains and PARP/Cap/Cyclin Enzyme System	0
Acknowledgements to Reviewers	0
Heavy Metal Stress Tolerance by Serratia nematodiphila sp. MB307: Insights from Mass Spectrometry-based Proteomics	0
A Combined Method of Protein Extraction from Unorthodox Plant Samples for Proteomics	0
The Use of New Omics Techniques for Natural Products to Improve Drug Efficiency and Mechanism	0
Recent Trends in Machine Learning-Based Computational Biology and Digital Medicine	0
Molecular Mechanisms of Antiproliferative Effects of Safranal on Cervical Cancer: Evidence from Bioinformatics Analysis	0
Airway Fibroblast Secretory Products Enhance Cell Migration	0
Identification of Potential Necroptosis Inhibitors using Pharmacophore Model: An In-silico Approach	0
Elucidation of EhSec1 and Interaction with EhSyntaxin1A /1B of Entamoeba Histolytica via Docking and Molecular Simulations	0
Meet the Editorial Board Member	0
Identification of Disease-Protein Associations from a Heterogeneous Network Using Graph Embedding and Sample Screening Algorithms	0
Heteromerization as a Mechanism Modulating the Affinity of the ACE2 Receptor to the Receptor Binding Domain of SARS-CoV-2 Spike Protein	0
Novel Feature Representation and Machine Learning Methods in Computational Proteomics	0
Determination of FGFR1 Functions in Cytarabine Treatment of Acute Myeloid Leukemia Through Bioinformatics Analysis	0
Proteomic Analysis of Tumor-specific Biomarkers in Colon Cancer	0
The Efficacy and Safety Analysis of the Bendamustine, Pomalidomide, and Dexamethasone (BPD) Combination Treatment for Patients with Proteasome Inhibitor Intolerance and/or Relapsed Multiple Myeloma	0
iTRAQ-Based Quantitative Proteomics Analysis Reveals the Invasion Mechanism of Spiroplasma eriocheiris in 3T6 Cells	0
Proteomic Study of the Mechanism of Talin-C as an Inhibitor of HIV Infection	0
Curcumin Reverts the Protein Differential Expression in the Liver of the Diabetic Obese db/db Mice	0
An in-silico approach for structural and functional annotation of an uncharacterized protein of human papillomavirus (HPV)	0
The Epidemiological and Pangenome Landscape of Staphylococcus aureus and Identification of Conserved Novel Candidate Vaccine Antigens	0
In Silico Analysis of Antarctic Rhomboid Proteases (Rho): Unveiling Protein Structure and Evolution	0
CovidLLM: A Robust Large Language Model with Missing Value Adaptation and Multi-Objective Learning Strategy for Predicting Disease Severity and Clinical Outcomes in COVID-19 Patients	0
Interaction of C-terminal Truncated Beta-amyloid Peptides with Human Serum Albumin	0
Acknowledgements to Reviewers	0
Investigating PI3P Binding with Plasmodium Falciparum HSP70 Proteins	0
A Pan-Cancer Signature For S100A11 - Prognostic And Immunotherapeutic Value	0
Immunoprotective Potential of Adenylosuccinate Synthetase Protein (PurA) in Streptococcus equi ssp. zooepidemicus Infections	0
Study on the Role of Human Gut Microbiome in Controlling MRSA-Induced Sepsis Using Proteomics Tool	0
Quantitative Proteomics Reveals SOS2-Related Proteins in Arabidopsis Under Salt Stress	0
Corrigendum to: Cancer Proteomics: New Horizons and Insights into Therapeutic Applications	0
Meet the Editorial Board Member	0
Preface	0
Targeting the unexplored 'dark proteome': Novel approaches in drug discovery	0
The Study of Different Signal Peptides in Improvement of Recombinant Proteins Solubility in E. coli: A Review Article	0
Incretin Hormones: Mechanisms, Therapeutic Implications, and Future Directions in Glucose Regulation and Diabetes Management	0
Integrated Analysis of the Proteome Datasets Using the Assembled Genome Sequence Provides New Insights into the Specialization of Shoots, Stolons, and Rhizomes in Bermudagrass (Cynodon dactylon L.)	0
Protein Aggregation and Self Assembly in Health and Disease	0
Computational Evaluation of Bioactive Compounds from Bryophyllum pinnatum as a Novel GSK3B Inhibitor in Alzheimer's Disease	0
Nanotechnology-Driven Approaches for Targeted Rectal Microbiome Modulation in Gastrointestinal Disorders	0
Network Pharmacology and Computational Approach to Explore the Potential Underlying Mechanism of Centella asiatica in the Treatment of Diabetes Mellitus	0
A Complete Sojourn of Monoclonal Antibodies: AI, Rare Diseases / Disorders and Immunotoxic Effects	0
Integrating the summary data-based mendelian randomization and transcriptomic analysis identifies candidate genes and repositioning targets for asthma	0
Subcellular Proteomic Analysis Reveals Dysregulation in the Organization of Human A549 Cells Infected with Influenza Virus H7N9	0
Decoding Glycobiomarkers in Non-Alcoholic Steatohepatitis (NASH) and Related Hepatocellular Carcinoma (HCC)	0
AraMultiOmics: A Platform for Generating Multi-Omics Features for Studying Symbiosis in Arabidopsis thaliana and Arbuscular Mycorrhizal Fungi	0
Relationship of Antiviral Proteins with Retroelements in the Brain in Pathogenesis of Neurodegenerative Diseases	0
Proteomics of the Skin Secretion of Pulchrana glandulosa (Anura: Ranidae) (Boulenger, 1882), Langkawi Island, Kedah, Peninsular Malaysia	0
LncRNA SH3BP5-AS1 Regulates the Proliferation and Cell Cycle of Non-Small Cell Lung Cancer Cells	0
Computational Analysis and Inhibition Study of Carbonic Anhydrase from Azadirachta indica Leaves	0
Advances in Research on Adropin: Potential Implications for Clinical Diagnosis and Possible Treatment – A Mini-Review	0
An Evolutionary Attributes of OMP33-36 in Acinetobacter baumannii: In silico Based Analysis	0
Comparison of the Effects of Different Coating Matrices on Cell Binding and Nitric Oxide-mediated Protein S-nitrosylation in Endothelial Cells under Shear Flow	0
In silico Analysis of Maize Spermidine Synthase: Detailed Insights from Substrate Docking Studies	0
A Useful Tool for the Identification of DNA-Binding Proteins Using Graph Convolutional Network	0
Proteomic Analysis of Early Phosphorylated Proteins in Acute Pancreatitis Model	0
Metabolomics of Meat Color: Practical Implications	0
Methanol and Sorbitol Affect the Molecular Dynamics of Arginine Deiminase: Insights for Improving its Stability	0
Predicting and Validating the Mechanism of Action of the Enema Formula in Treating Colorectal Cancer by Using Network Pharmacology, GEO, and TCGA Databases	0
Knockdown of miR-135a-5p Promotes Mitophagy by Regulating FoxO1/PINK1/Parkin Signaling in Hepatoma Cells Exposed to Oxidative Stress	0
Prediction of Protein Structural Classes: Features Extraction to Classification Algorithm	0
Design, synthesis, and theoretical studies of sulfonylated purine derivatives as EGFR inhibitor	0
Decoding disorder: Advances in predicting intrinsically disordered proteins	0
In-silico Analysis of Peroxidase from Raphanus Sativus	0
Advances in bioinformatics techniques for ophthalmic diseases	0
Proteome Profiling of Serum Exosomes from Newborns with Lung Injury after Perinatal Asphyxia	0
A Motif in Metallopeptidase Inhibitor Decreases Effectively the Activity of Macrophage Metalloproteinases	0

Comprehensive omics profiling in acute myeloid leukemia: From molecular landscape to clinical translation	0
H-GWNN: A Population Graph-Based Autism Spectrum Disorders Identification Framework for Tackling Data Heterogeneity	0
Machine learning-based classification of viral membrane proteins	0
Antioxidant defense gene expression associated with lung cancer pathology: implications for diagnostic and therapeutic targets	0
Screening of immune-related secretory proteins linking primary Sjögren’s syndrome with pulmonary arterial hypertension based on comprehensive bioinformatics analysis and machine learning	0
Proteomics Response of Photosynthetic Machinery to Abiotic Stresses: A Review	0
Comparative Clinical, Proteomic, and Serologic Evaluation in Non-Hospitalized COVID-19 Patients and Healthy Individuals	0
Characterization of Proteins from Putative Human DNA and RNA Viruses	0
Effective Inhibition of Mitochondrial Metabolism by Cryptotanshinone in MDA-MB231 cells: A Proteomic Analysis	0
Identification of Human Protein Subcellular Location with Multiple Networks	0
Meet the Editorial Board Member	0
Docking and AI-based classification cum recurrent neural network validation for predicting anti-tubercular leads against dprE-1 enzyme targeter	0
Plasma Apolipoprotein-AIV Downregulated in Patients with Major Depressive Disorder having Suicidal Ideation Compared to those without Suicidal Ideation	0