OOIR: Observatory of International Research

Papers

(The TQCC of Tree Genetics & Genomes is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-08-01 to 2025-08-01.)

Article	Citations
Comparative chloroplast genomes of Prunus subgenus Cerasus (Rosaceae): insights into sequence variations and phylogenetic relationships	18
Revealing local adaptation of Quercus suber L. populations under climate change through Genome Scans and Environmental Association Analysis	18
Population structure and intraspecific ecological niche differentiation point to lineage divergence promoted by polyploidization in Psidium cattleyanum (Myrtaceae)	15
Assessment of genetic diversity and population structure of Malus sieversii and Malus niedzwetzkyana from Kazakhstan using high-throughput genotyping	15
Comparative plastid genome analyses of Rosa: Insights into the phylogeny and gene divergence	14
Association genetics of wood traits in European black poplar (Populus nigra L.)	13
Genotyping of cacao (Theobroma cacao L.) germplasm resources with SNP markers linked to agronomic traits reveals signs of selection	13
Construction of a high-density genetic linkage map and QTL analysis using an interspecific F1 population in pistachio	13
The future of rubber production: a review of genetic regulation of biosynthetic pathways and genome editing technologies in natural rubber-producing plants	11
A high-density genetic map from a cacao F2 progeny and QTL detection for resistance to witches’ broom disease	11
Parametric mapping of QTL for resistance to European canker in apple in ‘Aroma’ × ‘Discovery’	11
Spatial genetic structure and mating system in forest tree populations from seasonally dry tropical forests: a review	11
Genetic diversity of apple heirloom germplasm in Bosnia and Herzegovina, as revealed by SNP markers	10
Comprehensive analysis of the SmPIN gene family in Salix matsudana: roles in growth, development, and stress adaptation	10
The Barren Berry phenotype: untangling cranberry (Vaccinium macrocarpon Ait.) genetic contamination in central Wisconsin and beyond	10
Genetic variation and origin of mountain birch on a recently colonized glacial outwash plain by Vatnajökull glacier, southeast Iceland	9
Genetic breaks caused by ancient forest fragmentation: phylogeography of Staudtia kamerunensis (Myristicaceae) reveals distinct clusters in the Congo Basin	9
Comparison of chloroplast genomes of compound-leaved maples and phylogenetic inference with other Acer species	8
Mating system and inbreeding depression in Hymenaea stigonocarpa	8
Organellar genome evolution in Ribes L.: hotspots of mutation, sequence transfer, codon usage, and phylogenetic context	8
Isolation-by-ecology in a Neotropical savanna tree	8
Insights into the evolution of the eucalypt CER1 and CER3 genes involved in the synthesis of alkane waxes	8
QTL mapping of polymethoxyflavone (PMF) accumulation in citrus	8
Analysis of the relationships among telomere‒associated protein‒encoding gene expression, tree age and telomere length in Platycladus orientalis (L.) Franco	8
Patterns of genomic diversity and linkage disequilibrium across the disjunct range of the Australian forest tree Eucalyptus globulus	7

Date palm (Phoenix dactylifera L.) genetic improvement via biotechnological approaches	7
Heterochromatic patterns of Citrus revisited: a new look at species origins and karyotype evolution	7
Genome-wide identification of the Carya illinoinensis bZIP transcription factor and the potential function of S1-bZIPs in abiotic stresses	6
A novel synthesis of two decades of microsatellite studies on European beech reveals decreasing genetic diversity from glacial refugia	6
Traceability of provenance-collected lodgepole pine in a reforestation chain of custody case study	6
Correction to: A novel synthesis of two decades of microsatellite studies on European beech reveals decreasing genetic diversity from glacial refugia	6
Genomic exploration of Thuja plicata indicates no loss of diversity from adults to offspring in UK Woodlands	6
Characterization of the actin (ACT) family in Rosaceae and role of PbrACT1 in pear pollen tube growth	5
The mitochondrial genome sequence of Syagrus coronata (Mart.) Becc. (Arecaceae) is characterized by gene insertion within intergenic spaces	5
Early-growth results within a Eucalyptus globulus breeding population suggest limited scope for selection focused on CO2 responsiveness	5
Genetic analysis of quantitative variation in almond nut traits	5
Genetic consequence of widespread plantations of Cryptomeria japonica var. sinensis in Southern China: implications for afforestation strategies under climate change	5
Marker-based pedigree reconstruction reveals limited diversity within commercial Eucalyptus benthamii breeding populations in Brazil	5
Fine mapping of the gene controlling the easy-peeling pellicle trait and development of an efficient marker-assisted selection system in Japanese chestnut (Castanea crenata Sieb. et Zucc.)	5
Analysis of genetic parameters of growth and wood traits provides insight into the genetic improvement of Schima superba	5
Contribution of external dispersal to pollen pool genetic diversity in a riparian population of Cercidiphyllum japonicum	5
Pleistocene-dated genomic divergence of avocado trees supports cryptic diversity in the Colombian germplasm	5
Correction to: Deep plastid phylogeographic divergence of beaked hickory (Carya sinensis) calls for transboundary conservation in a biodiversity hotspot	5
Whole genome resequencing unveils population structure and wood trait associations for Indian teak germplasm	5
The AP2/ERF transcription factor OfERF2 promotes flavonoid biosynthesis in Osmanthus fragrans	4
Identification and dynamic expression analysis of microRNAs associated with multi-tepal formation in Magnolia polytepala	4
Female flowers first: QTL mapping in eastern black walnut (Juglans nigra L.) identifies a dominant locus for heterodichogamy syntenic with that in Persian walnut (J. regia L.)	4
Genetic insights into ecology and conservation of Pinus gerardiana (chilgoza pine) a threatened species of north western himalayas – a review	4
Deep plastid phylogeographic divergence of beaked hickory (Carya sinensis) calls for transboundary conservation in a biodiversity hotspot	4
Breakdown of self-incompatibility of apple (Malus × domestica Borkh.) induced by gamma-ray mutagenesis	4
Characterising the molecular diversity of ash (Fraxinus excelsior L.) at its western marginal range in Europe — phylogeographic insights and implications for conservation in Ireland	4
Genetic mapping of two quantitative resistance loci to Venturia nashicola in an interspecific pear family	4
The first mitogenome of Dracaena (Dracaena sp. in Guangxi) reveals complex multi-chromosomal architecture and long repeat sequence-driven evolution	4
Preserving genetic diversity in Pinus tabuliformis breeding population through core collection development	4
Low-density AgriSeq targeted genotyping-by-sequencing markers are efficient for pedigree quality control in Pinus taeda L. breeding	4
Genomic selection: an effective tool for operational Eucalyptus globulus clonal selection	4