OOIR: Observatory of International Research

Papers

(The TQCC of Molecular Genetics and Genomics is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)

Article	Citations
Enhancing tiny millets through genome editing: current status and future prospects	64
Phenotypic simulation for fruit-related traits in F1 progenies of chili peppers (Capsicum annuum) using genomic prediction based solely on parental information	46
Prevalence and molecular spectrum of thalassemia in infertile population among different ethnic groups in Hainan Province, China	46
Blood transcriptome analysis revealed the immune changes and immunological adaptation of wildness training giant pandas	33
Genetic evidence for a single founding population of the Lakshadweep Islands	27
Regulation of PPARγ/CPT-1 expression ameliorates cochlear hair cell injury by regulating cellular lipid metabolism and oxidative stress	27
Novel cataract-causing variant c.177dupC in c-MAF regulates the expression of crystallin genes for cell apoptosis via a mitochondria-dependent pathway	26
Association investigations between ACE1 and ACE2 polymorphisms and severity of COVID-19 disease	25
Analysis of TSC1 and TSC2 genes and evaluation of phenotypic correlations with tuberous sclerosis	24
The maternal ancestry of the Kavaratti islanders and the last glacial maximum aftermath	22
Genomic region and origin for selected traits during differentiation of small-fruit cultivars in Japanese apricot (Prunus mume)	22
Characterization and diversity of CRISPR/Cas systems in Klebsiella oxytoca	20
Whole-genome sequence and mass spectrometry study of the snow blight fungus Phacidium infestans (Karsten) DSM 5139 growing at freezing temperatures	20
Spondyloenchondrodysplasia in five new patients: identification of three novel ACP5 variants with variable neurological presentations	19
EMP1 correlated with cancer progression and immune characteristics in pan-cancer and ovarian cancer	17
Genetic analysis of patients with low-frequency non-syndromic hearing loss	17
A novel imprinted locus on bovine chromosome 18 homologous with human chromosome 16q24.1	17
Correction: Genetic evidence for a single founding population of the Lakshadweep Islands	17
From cactus to crop: genomic insights of a beneficial and non-pathogenic Curtobacterium flaccumfaciens strain and the evolution of its pathosystem	16
Differentially used codons among essential genes in bacteria identified by machine learning-based analysis	16
Genomics-based analysis of four porcine-derived lactic acid bacteria strains and their evaluation as potential probiotics	15
Forensic efficiency and genetic polymorphisms of 12 X-chromosomal STR loci in Northeastern Thai populations	15
Tomatidine activates autophagy to improve lung injury and inflammation in sepsis by inhibiting NF-κB and MAPK pathways	15
Full-length transcriptome characterization and analysis of Carrizo Citrange and molecular insights into pathogen defense	15
A homozygous missense variant in YTHDC2 induces azoospermia in two siblings	14

The mechanism of INO80D involved in chromatin remodeling regulating spermatogenesis in Chinese mitten crab (Eriocheir sinensis)	14
Pps1, phosphatidylserine synthase, regulates the salt stress response in Schizosaccharomyces pombe	14
Single-cell RNA sequencing reveals surface markers of primordial germ cells in chicken and zebra finch	14
Characterization of hAT DNA transposon superfamily in the genome of Neotropical fish Apareiodon sp.	14
ARNSHL gene identification: past, present and future	14
A meta-analysis of different von Hippel Lindau mutations: are they related to retinal capillary hemangioblastoma?	12
Amplicon genome fishing (AGF): a rapid and efficient method for sequencing target cis-regulatory regions in nonmodel organisms	12
Genetic testing enables a precision medicine approach for nephrolithiasis and nephrocalcinosis in pediatrics: a single-center cohort	12
Selection signatures for heat tolerance in Brazilian horse breeds	11
A novel cancer-associated fibroblasts risk score model predict survival and immunotherapy in lung adenocarcinoma	11
Improving the accuracy of genomic predictions in an outcrossing species with hybrid cultivars between heterozygote parents: a case study of oil palm (Elaeis guineensis Jacq.)	11
Distinct role of HAMP and HAMP-like linker domains in regulating the activity of Hik1p, a hybrid histidine kinase 3 from Magnaporthe oryzae	11
A frameshift insertion in FA2H causes a recessively inherited form of ichthyosis congenita in Chianina cattle	11
Dimorphic frataxin and its gene regulation by sex steroids in hamsters	11
Transcriptome and metabolome profiling in different stages of infestation of Eucalyptus urophylla clones by Ralstonia solanacearum	11
Application of the prenatal BACs-on-Beads™ assay for rapid prenatal detection of sex chromosome mosaicism	10
Genomic characterization of a rare Carica papaya X chromosome mutant reveals a candidate monodehydroascorbate reductase 4 gene involved in all-hermaphrodite phenomenon	10
Independent DSG4 frameshift variants in cats with hair shaft dystrophy	10
Revealing diverse alternative splicing variants of the highly homologous SMN1 and SMN2 genes by targeted long-read sequencing	10
Mapping of dynamic QTLs for resistance to Fusarium wilt (Fusarium oxysporum f. sp. vasinfectum) race 4 in a backcross inbred line population of Upland cotton	10
A survey of transcriptome complexity using full-length isoform sequencing in the tea plant Camellia sinensis	10
The influence of VDR polymorphisms on the type 2 diabetes susceptibility in Chinese: an interaction with hypertriglyceridemia	10
Comprehensive bioinformatics analyses reveal immune genes responsible for altered immune microenvironment in intervertebral disc degeneration	9
Genetic analysis based on 15 autosomal short tandem repeats (STRs) in the Chaouia population, western center Morocco, and genetic relationships with worldwide populations	9
A two-phase comprehensive NSCLC prognostic study identifies lncRNAs with significant main effect and interaction	9
A novel strategy to map a locus associated with flowering time in canola (Brassica napus L.)	9
Natural variation and genetic loci underlying resistance to grain shattering in standing crop of modern wheat	9
The genomic history of southwestern Chinese populations demonstrated massive population migration and admixture among proto-Hmong–Mien speakers and incoming migrants	9
High level of somatic mutations detected in a diploid banana wild relative Musa basjoo	9
The first maternal genetic study of hunter-gatherers from Vietnam	9
Mesenchymal stem cells-derived exosomes carrying microRNA-30b confer protection against pulmonary fibrosis by downregulating Runx1 via Spred2	9
Different scales of gene duplications occurring at different times have jointly shaped the NBS-LRR genes in Prunus species	8
Polyphenols as microRNA modulator in endometrial cancer: implications for apoptosis induction	8
RNA sequencing reveals a complete picture of a homozygous missense variant in a patient with VPS13D movement disorder: a case report and review of the literature	8
Correction to: XG-PseU: an eXtreme Gradient Boosting based method for identifying pseudouridine sites	8
Whole genome sequencing and evolutionary significance of a novel mosquitocidal bacterium, Bacillus thuringiensis serovar israelensis VCRC-B650 reported from Union Territory of Puducherry, India highly	8
Deletions in GSN gene associated with growth traits of four Chinese cattle breeds	8
Meiotic behavior, transmission and active genes of B chromosomes in the cichlid Astatotilapia latifasciata: new clues about nature, evolution and maintenance of accessory elements	8
Interaction network among factors involved in heterocyst-patterning in cyanobacteria	8
Complete genome analysis of Bacillus velezensis HF-14,109 with potential for broad-spectrum antimicrobial activity and high enzyme-producing ability from common carp (Cyprinus carpio L.)	7
Super enhancer loci of EGFR regulate EGFR variant 8 through enhancer RNA and strongly associate with survival in HNSCCs	7
Molecular epidemiological study of Pseudomonas aeruginosa strains isolated from hospitals in Brazil by MLST and CRISPR/Cas system analysis	7
BS-Seq reveals major role of differential CHH methylation during leaf rust resistance in wheat (Triticum aestivum L.)	7
Whole-genome sequencing unravels novel genetic determinants and regulatory pathways associated with triamcinolone acetonide-induced ocular hypertension	7
Correction: Optimization of a 2A self-cleaving peptide-based multigene expression system for efficient expression of upstream and downstream genes in silkworm	7
Sequence and functional analysis of MIR319 promoter homologs from Brassica juncea reveals regulatory diversification and altered expression under stress	7
Genome characterisation of three mycorrhizal helper bacterial strains isolated from a polycyclic aromatic hydrocarbon polluted site	7
A comprehensive analysis of stroke risk factors and development of a predictive model using machine learning approaches	7
Computational insights into host–pathogen protein interactions: unveiling penaeid shrimp and white spot syndrome virus interplay	7
Genetic variability of 23 autosomal STRs in Austroasiatic-speaking populations from Thailand	6

The formation of proto-austronesians: insights from a revised phylogeography of the paternal founder lineage	6
Genetic diversity and population genetic structure analysis of an extensive collection of wild and cultivated Vigna accessions	6
Identification of potential microRNAs regulating metabolic plasticity and cellular phenotypes in glioblastoma	6
Identification and functional analysis of two GJA8 variants in Chinese families with eye anomalies	6
Single- and multi-trait genomic prediction and genome-wide association analysis of grain yield and micronutrient-related traits in ICARDA wheat under drought environment	6
Novel MEI1 mutations cause chromosomal and DNA methylation abnormalities leading to embryonic arrest and implantation failure	6
Cloning and in silico characterization of cinnamyl alcohol dehydrogenase gene involved in lignification of Tall fescue (Festuca arundinacea Schreb.)	6
Inheritance and molecular mapping of solitary/cluster fruit-bearing habit in Luffa	6
The signaling pathway of levamisole-sensitive-acetylcholine receptors involved in short-term forgetting of Caenorhabditis elegans	6
NGS-driven molecular diagnosis of heterogeneous hereditary neurological disorders reveals novel and known variants in disease-causing genes	6
Understanding the genomic selection for crop improvement: current progress and future prospects	6
The comparative studies of complete chloroplast genomes in Actinidia (Actinidiaceae): novel insights into heterogenous variation, clpP gene annotation and phylogenetic relationships	6
Phylogenomics, CAZyome and core secondary metabolome of Streptomyces albus species	6
In silico analysis of a novel pathogenic variant c.7G > A in C14orf39 gene identified by WES in a Pakistani family with azoospermia	6
Mutational investigation of 17 causative genes in a cohort of 113 families with nonsyndromic early-onset high myopia in northwestern China	6
Development and validation of allele-specific PCR-based SNP typing in a gene on chromosome D03 conferring resistance to Fusarium wilt race 4 in Upland cotton (Gossypium hirsutum)	6
A comparative study of population genetic structure reveals patterns consistent with selection at functional microsatellites in common sunflower	6
SLC10A1 rs2296651 variant (S267F mutation) predicts biochemical traits, hepatitis B virus infection susceptibility and the risk of gallstone disease	6
Robust regression based genome-wide multi-trait QTL analysis	5
Epigenetic inactivation of DNA repair genes as promising prognostic and predictive biomarkers in urothelial bladder carcinoma patients	5
De novo assembly of the complete mitochondrial genome of Mycetophylax simplex Emery, 1888 through organelle targeting revels no substantial expansion of gene spacers, but rather some slightly shorter	5
Diversity and potential functional role of phyllosphere-associated actinomycetota isolated from cupuassu (Theobroma grandiflorum) leaves: implications for ecosystem dynamics and plant defense strategi	5
Characterization of POLE c.1373A > T p.(Tyr458Phe), causing high cancer risk	5
Predisposition to atrioventricular septal defects may be caused by SOX7 variants that impair interaction with GATA4	5
CACNA1H restrains chemotherapy resistance in ovarian clear cell carcinoma cells by repressing autophagy	5
Construction of circRNA-related ceRNA networks in longissimus dorsi muscle of Queshan Black and Large White pigs	5
Genetic dissection of flowering time in flax (Linum usitatissimum L.) through single- and multi-locus genome-wide association studies	5
Genotypic spectrum of ABCA4-associated retinal degenerations in 211 unrelated Mexican patients: identification of 22 novel disease-causing variants	5
Four classic “de novo” genes all have plausible homologs and likely evolved from retro-duplicated or pseudogenic sequences	5
Unravelling epigenetic mechanisms in Cerastoderma edule genome: a comparison of healthy and neoplastic cockles	5
Functional testing for variant prioritization in a family with long QT syndrome	5
Microbial community composition associated with early developmental stages of the Indian white shrimp, Penaeus indicus	5
Enhanced SA and Ca2+ signaling results in PCD-mediated spontaneous leaf necrosis in wheat mutant wsl	5
Characterization and clinical relevance of PDGFRA pathway copy number variation gains across human cancers	5
Genome resequencing-based high-density genetic map and QTL detection for yield and fiber quality traits in diploid Asiatic cotton (Gossypium arboreum)	5
Genomic insights into the molecular mechanisms of a Pseudomonas strain significant in its survival in Kongsfjorden, an Arctic fjord	5
Diagnostic, grading and prognostic role of a restricted miRNAs signature in primary and metastatic brain tumours. Discussion on their therapeutic perspectives	5
Introduction of a diverse genetic background of Pyrus into Malus through intergeneric hybridization	5
A computational approach to biological pathogenicity	5
Characterizing identity by descent segments in Chinese interpopulation unrelated individual pairs	5
Phylogenomic analysis of the Erwiniaceae supports reclassification of Kalamiella piersonii to Pantoea piersonii comb. nov. and Erwinia gerundensis to the new genus Duffyella gen. nov. as Duffyella ger	5
Genome-wide association study identified QTLs and genes underlying early seedling vigour in aus rice (Oryza sativa L.)	5
Small RNA sequencing and identification of papaya (Carica papaya L.) miRNAs with potential cross-kingdom human gene targets	5
Construction of a high-density genetic map using specific-length amplified fragment markers and identification of QTLs for branching angle in poplar	5