Frontiers in Neuroinformatics

Article	Citations
Editorial: Innovative methods for sleep staging using neuroinformatics	139
The quest to share data	84
Chronic jet lag-like conditions dysregulate molecular profiles of neurological disorders in nucleus accumbens and prefrontal cortex	84
A multi-head self-attention deep learning approach for detection and recommendation of neuromagnetic high frequency oscillations in epilepsy	78
hvEEGNet: a novel deep learning model for high-fidelity EEG reconstruction	64
FN-OCT: Disease Detection Algorithm for Retinal Optical Coherence Tomography Based on a Fusion Network	52
Intra-V1 functional networks and classification of observed stimuli	45
Predicting the clinical prognosis of acute ischemic stroke using machine learning: an application of radiomic biomarkers on non-contrast CT after intravascular interventional treatment	43
Systems Neuroscience Computing in Python (SyNCoPy): a python package for large-scale analysis of electrophysiological data	38
Detection of pulmonary embolism severity using clinical characteristics, hematological indices, and machine learning techniques	34
Editorial: Neuroinformatics of large-scale brain modelling	33
State-dependent modulation of thalamocortical oscillations by gamma light flicker with different frequencies, intensities, and duty cycles	32
A computational model of Alzheimer's disease at the nano, micro, and macroscales	31
versaFlow: a versatile pipeline for resolution adapted diffusion MRI processing and its application to studying the variability of the PRIME-DE database	30
Magnetic Resonance Imaging Sequence Identification Using a Metadata Learning Approach	29
A standardized accelerometry method for characterizing tremor: Application and validation in an ageing population with postural and action tremor	28
Erratum: Mapping and validating a point neuron model on Intel's neuromorphic hardware Loihi	26
Tracking axon initial segment plasticity using high-density microelectrode arrays: A computational study	26
Finding the limits of deep learning clinical sensitivity with fractional anisotropy (FA) microstructure maps	25
Unsupervised method for representation transfer from one brain to another	25
Multi-threshold image segmentation for melanoma based on Kapur’s entropy using enhanced ant colony optimization	23
Efficient Simulation of 3D Reaction-Diffusion in Models of Neurons and Networks	22
Multiple sclerosis and breast cancer risk: a meta-analysis of observational and Mendelian randomization studies	21
Transdiagnostic clustering of self-schema from self-referential judgements identifies subtypes of healthy personality and depression	21
SynCoPa: Visualizing Connectivity Paths and Synapses Over Detailed Morphologies	21

Web-based processing of physiological noise in fMRI: addition of the PhysIO toolbox to CBRAIN	20
Correction: Transdiagnostic clustering of self-schema from self-referential judgements identifies subtypes of healthy personality and depression	20
QuNex—An integrative platform for reproducible neuroimaging analytics	20
Analyzing Complex Problem Solving by Dynamic Brain Networks	18
Light-weight neural network for intra-voxel structure analysis	17
NeuroBridge ontology: computable provenance metadata to give the long tail of neuroimaging data a FAIR chance for secondary use	16
Radiomics-driven neuro-fuzzy framework for rule generation to enhance explainability in MRI-based brain tumor segmentation	16
A review of risk concepts and models for predicting the risk of primary stroke	16
Project, toolkit, and database of neuroinformatics ecosystem: A summary of previous studies on “Frontiers in Neuroinformatics”	16
Evaluating machine learning pipelines for multimodal neuroimaging in small cohorts: an ALS case study	16
Alternative patterns of deep brain stimulation in neurologic and neuropsychiatric disorders	16
Editorial: Neuroscience, computing, performance, and benchmarks: Why it matters to neuroscience how fast we can compute	16
BitBrain and Sparse Binary Coincidence (SBC) memories: Fast, robust learning and inference for neuromorphic architectures	16
Age-Specific Adult Rat Brain MRI Templates and Tissue Probability Maps	15
Machine learning-based infection prediction model for newly diagnosed multiple myeloma patients	15
Half-UNet: A Simplified U-Net Architecture for Medical Image Segmentation	15
Online interoperable resources for building hippocampal neuron models via the Hippocampus Hub	15
Corrigendum: Mapping and validating a point neuron model on intel's neuromorphic hardware Loihi	15
Scaling and Benchmarking an Evolutionary Algorithm for Constructing Biophysical Neuronal Models	15
A scalable implementation of the recursive least-squares algorithm for training spiking neural networks	14
EpiBOX: An Automated Platform for Long-Term Biosignal Collection	14
Multi-Scale Graph Representation Learning for Autism Identification With Functional MRI	14
Erratum: Advancing prediction of risk of intraoperative massive blood transfusion in liver transplantation with machine learning models. A multicenter retrospective study	14
Discovering optimal features for neuron-type identification from extracellular recordings	13
Editorial: Addressing large scale computing challenges in neuroscience: current advances and future directions	13
Multi-omics integration reveals a six-malignant cell maker gene signature for predicting prognosis in high-risk neuroblastoma	13
A systematic comparison of deep learning methods for EEG time series analysis	13
Long-range temporal correlations in resting state alpha oscillations in major depressive disorder and obsessive-compulsive disorder	13
2.5D and 3D segmentation of brain metastases with deep learning on multinational MRI data	13
Recognition of MI-EEG signals using extended-LSR-based inductive transfer learning	13
Machine learning reveals interhemispheric somatosensory coherence as indicator of anesthetic depth	12
Towards Bridging the Gap Between Computational Intelligence and Neuroscience in Brain-Computer Interfaces With a Common Description of Systems and Data	12
ConGen—A Simulator-Agnostic Visual Language for Definition and Generation of Connectivity in Large and Multiscale Neural Networks	12
Translating single-neuron axonal reconstructions into meso-scale connectivity statistics in the mouse somatosensory thalamus	12
The Multicentre Acute ischemic stroke imaGIng and Clinical data (MAGIC) repository: rationale and blueprint	12
SDA: a data-driven algorithm that detects functional states applied to the EEG of Guhyasamaja meditation	12
Contrastive self-supervised learning for neurodegenerative disorder classification	11
Enhanced Performance by Interpretable Low-Frequency Electroencephalogram Oscillations in the Machine Learning-Based Diagnosis of Post-traumatic Stress Disorder	11
PyDapsys: an open-source library for accessing electrophysiology data recorded with DAPSYS	11
STEPS 4.0: Fast and memory-efficient molecular simulations of neurons at the nanoscale	11
PymoNNto: A Flexible Modular Toolbox for Designing Brain-Inspired Neural Networks	11
A Validation of Supervised Deep Learning for Gait Analysis in the Cat	11
Feature Selection Techniques for a Machine Learning Model to Detect Autonomic Dysreflexia	11
Time-Frequency Representations of Brain Oscillations: Which One Is Better?	11
Synthesis of diffusion-weighted MRI scalar maps from FLAIR volumes using generative adversarial networks	11
A Toolbox and Crowdsourcing Platform for Automatic Labeling of Independent Components in Electroencephalography	11
Power spectral analysis of voltage-gated channels in neurons	10
Dynamic topological data analysis: a novel fractal dimension-based testing framework with application to brain signals	10
Editorial: Reproducible analysis in neuroscience	10
Editorial: Weakly supervised deep learning-based methods for brain image analysis	10

Brain structural alterations in young girls with Rett syndrome: A voxel-based morphometry and tract-based spatial statistics study	10
Investigating cortical complexity and connectivity in rats with schizophrenia	10
Brain-Computer Interface using neural network and temporal-spectral features	10
Classification of ROI-based fMRI data in short-term memory tasks using discriminant analysis and neural networks	10
Events in context—The HED framework for the study of brain, experience and behavior	10
Enhanced heart sound anomaly detection via WCOS: a semi-supervised framework integrating wavelet, autoencoder and SVM	10
Multiscale co-simulation design pattern for neuroscience applications	10
Multi-Source Domain Adaptation Techniques for Mitigating Batch Effects: A Comparative Study	10
Identifying discriminative features of brain network for prediction of Alzheimer’s disease using graph theory and machine learning	9
Neuroimaging article reexecution and reproduction assessment system	9
Building a realistic, scalable memory model with independent engrams using a homeostatic mechanism	9
Editorial: Navigating the landscape of FAIR data sharing and reuse: repositories, standards, and resources	9
Introducing Region Based Pooling for handling a varied number of EEG channels for deep learning models	8
RealNeuralNetworks.jl: An Integrated Julia Package for Skeletonization, Morphological Analysis, and Synaptic Connectivity Analysis of Terabyte-Scale 3D Neural Segmentations	8
Patterns of inflammation, microstructural alterations, and sodium accumulation define multiple sclerosis subtypes after 15 years from onset	8
Matlab Open Source Code: Noise-Assisted Multivariate Empirical Mode Decomposition Based Causal Decomposition for Causality Inference of Bivariate Time Series	8
Decoding EEG rhythms offline and online during motor imagery for standing and sitting based on a brain-computer interface	8
FAIR in action: Brain-CODE - A neuroscience data sharing platform to accelerate brain research	8
Explainable artificial intelligence based on feature optimization for age at onset prediction of spinocerebellar ataxia type 3	8
Impact of interferon-β and dimethyl fumarate on nonlinear dynamical characteristics of electroencephalogram signatures in patients with multiple sclerosis	8
Can micro-expressions be used as a biomarker for autism spectrum disorder?	8
EPAT: a user-friendly MATLAB toolbox for EEG/ERP data processing and analysis	8
Progressive 3D biomedical image registration network based on deep self-calibration	7
A Systematic Approach for Explaining Time and Frequency Features Extracted by Convolutional Neural Networks From Raw Electroencephalography Data	7
Deep CNN ResNet-18 based model with attention and transfer learning for Alzheimer's disease detection	7
Enhancing brain tumor detection in MRI with a rotation invariant Vision Transformer	7
A new machine learning model for predicting severity prognosis in patients with pulmonary embolism: Study protocol from Wenzhou, China	7
Editorial: Bringing together data- and knowledge-driven solutions for a better understanding and effective diagnostics of neurological disorders	7
Identifying Boys With Autism Spectrum Disorder Based on Whole-Brain Resting-State Interregional Functional Connections Using a Boruta-Based Support Vector Machine Approach	7
Editorial: Recent applications of noninvasive physiological signals and artificial intelligence	7
Estimation of Emotional Arousal Changes of a Group of Individuals During Movie Screening Using Steady-State Visual-Evoked Potential	7
A canonical polyadic tensor basis for fast Bayesian estimation of multi-subject brain activation patterns	7
Turbulent dynamics and whole-brain modeling: toward new clinical applications for traumatic brain injury	7
BIDScoin: A User-Friendly Application to Convert Source Data to Brain Imaging Data Structure	7
Efficient parameter calibration and real-time simulation of large-scale spiking neural networks with GeNN and NEST	7
Efficient simulation of neural development using shared memory parallelization	7
The ROSMAP project: aging and neurodegenerative diseases through omic sciences	7
Neural simulation pipeline: Enabling container-based simulations on-premise and in public clouds	7
Editorial: Physical neuromorphic computing and its industrial applications	7
Brain subnetworks most sensitive to alterations of functional connectivity in Schizophrenia: a data-driven approach	7
Novel Hybrid Brain-Computer Interface for Virtual Reality Applications Using Steady-State Visual-Evoked Potential-Based Brain–Computer Interface and Electrooculogram-Based Eye Tracking for Increased I	7
Sensitivity analysis of a mathematical model of Alzheimer's disease progression unveils important causal pathways	7
suMRak: a multi-tool solution for preclinical brain MRI data analysis	6
M3: using mask-attention and multi-scale for multi-modal brain MRI classification	6
Multi illumination color constancy based on multi-scale supervision and single-scale estimation cascade convolution neural network	6
Panama: An Open-Source Educational App for Ion Channel Biophysics Simulation	6
Functional MRI study of feedback-based reinforcement learning in depression	6
Fiber Clustering Acceleration With a Modified Kmeans++ Algorithm Using Data Parallelism	6
A generalized deep learning network for fractional anisotropy reconstruction: Application to epilepsy and multiple sclerosis	6
Differential processing of intrinsic vs. extrinsic coordinates in wrist movement: connectivity and chronometry perspectives	6
Quantifying evoked responses through information-theoretical measures	6
A Robust Modular Automated Neuroimaging Pipeline for Model Inputs to TheVirtualBrain	6
Single Image-Based Vignetting Correction for Improving the Consistency of Neural Activity Analysis in 2-Photon Functional Microscopy	6
An enhanced deep deterministic policy gradient algorithm for intelligent control of robotic arms	6
Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults	6
Improving the detection of sleep slow oscillations in electroencephalographic data	6
SparNet: A Convolutional Neural Network for EEG Space-Frequency Feature Learning and Depression Discrimination	6
Comparing the Performance of Two Radiomic Models to Predict Progression and Progression Speed of White Matter Hyperintensities	6
The image and data archive at the laboratory of neuro imaging	5
Modernizing the NEURON Simulator for Sustainability, Portability, and Performance	5
Maximum likelihood-based estimation of diffusion coefficient is quick and reliable method for analyzing estradiol actions on surface receptor movements	5
Extended Invariant Information Clustering Is Effective for Leave-One-Site-Out Cross-Validation in Resting State Functional Connectivity Modeling	5
The Case for Optimized Edge-Centric Tractography at Scale	5
A System-on-Chip Based Hybrid Neuromorphic Compute Node Architecture for Reproducible Hyper-Real-Time Simulations of Spiking Neural Networks	5
Efficient federated learning for distributed neuroimaging data	5
BrainQuake: An Open-Source Python Toolbox for the Stereoelectroencephalography Spatiotemporal Analysis	5
Modeling Neurodegeneration in silico With Deep Learning	5
Artificial intelligence role in advancement of human brain connectome studies	5
Editorial: Bio-Inspired Physiological Signal(s) and Medical Image(s) Neural Processing Systems Based on Deep Learning and Mathematical Modeling for Implementing Bio-Engineering Applications in Medical	5
Evaluation of an English language phoneme-based imagined speech brain computer interface with low-cost electroencephalography	5
Domain adaptation for EEG-based, cross-subject epileptic seizure prediction	5
Test-retest reliability of peak location in the sensorimotor network of resting state fMRI for potential rTMS targets	5
TReC: Transferred ResNet and CBAM for Detecting Brain Diseases	5
Exploring white matter dynamics and morphology through interactive numerical phantoms: the White Matter Generator	4
Non-stationary neural signal to image conversion framework for image-based deep learning algorithms	4
Neural network system for analyzing statistical factors of patients for predicting the survival of dental implants	4
Deep Learning in Large and Multi-Site Structural Brain MR Imaging Datasets	4
vol2Brain: A New Online Pipeline for Whole Brain MRI Analysis	4
Enhancing human activity recognition for the elderly and individuals with disabilities through optimized Internet-of-Things and artificial intelligence integration with advanced neural networks	4
Identifying natural inhibitors against FUS protein in dementia through machine learning, molecular docking, and dynamics simulation	4

Editorial: Brain Modeling of Neurogenerative Disorders	4
The pursuit of approaches to federate data to accelerate Alzheimer’s disease and related dementia research: GAAIN, DPUK, and ADDI	4
Video-based marker-free tracking and multi-scale analysis of mouse locomotor activity and behavioral aspects in an open field arena: A perspective approach to the quantification of complex gait distur	4
Bridging neuroscience and AI: a survey on large language models for neurological signal interpretation	4
Software tool for visualization of a probabilistic map of the epileptogenic zone from seizure semiologies	4
Commentary: Accelerating spiking neural network simulations with PymoNNto and PymoNNtorch	4
Comparison of CNN-Learned vs. Handcrafted Features for Detection of Parkinson's Disease Dysgraphia in a Multilingual Dataset	4
Microglial morphometric analysis: so many options, so little consistency	4
Brain MRI sequence and view plane identification using deep learning	4
Early detection of mild cognitive impairment through neuropsychological tests in population screenings: a decision support system integrating ontologies and machine learning	4
The EBRAINS Hodgkin-Huxley Neuron Builder: An online resource for building data-driven neuron models	4
Quantitative assessment of neurodevelopmental maturation: a comprehensive systematic literature review of artificial intelligence-based brain age prediction in pediatric populations	4
LLRHNet: Multiple Lesions Segmentation Using Local-Long Range Features	4
Review of Generative Adversarial Networks in mono- and cross-modal biomedical image registration	4
LaminaRGeneVis: A Tool to Visualize Gene Expression Across the Laminar Architecture of the Human Neocortex	4
ProbeInterface: A Unified Framework for Probe Handling in Extracellular Electrophysiology	4
Clinica: An Open-Source Software Platform for Reproducible Clinical Neuroscience Studies	4
A fast and robust hippocampal subfields segmentation: HSF revealing lifespan volumetric dynamics	4
Medical Image Interpolation Using Recurrent Type-2 Fuzzy Neural Network	4
Effects of individualized brain anatomies and EEG electrode positions on inferred activity of the primary auditory cortex	4
Reproducible supervised learning-assisted classification of spontaneous synaptic waveforms with Eventer	4
NeuroWRAP: integrating, validating, and sharing neurodata analysis workflows	4
Digitoids: a novel computational platform for mimicking oxygen-dependent firing of neurons in vitro	4
A Programmable Ontology Encompassing the Functional Logic of the Drosophila Brain	3
Learning the heterogeneous representation of brain's structure from serial SEM images using a masked autoencoder	3
Optimizing neuroscience data management by combining REDCap, BIDS and SQLite: a case study in Deep Brain Stimulation	3
Comparing feature selection and machine learning approaches for predicting CYP2D6 methylation from genetic variation	3
Enabling uncertainty estimation in neural networks through weight perturbation for improved Alzheimer's disease classification	3
Neuromorphic-P2M: processing-in-pixel-in-memory paradigm for neuromorphic image sensors	3
On the Minimal Amount of EEG Data Required for Learning Distinctive Human Features for Task-Dependent Biometric Applications	3
Expected affine: A registration method for damaged section in serial sections electron microscopy	3
Intradialytic hypotension prediction using covariance matrix-driven whale optimizer with orthogonal structure-assisted extreme learning machine	3
A Hybrid Deep Learning Method for Early and Late Mild Cognitive Impairment Diagnosis With Incomplete Multimodal Data	3
Harmonizing data on correlates of sleep in children within and across neurodevelopmental disorders: lessons learned from an Ontario Brain Institute cross-program collaboration	3
Application value of a deep learning method based on a 3D V-Net convolutional neural network in the recognition and segmentation of the auditory ossicles	3
A Waveform-Independent Measure of Recurrent Neural Activity	3
A Spiking Neural Network Builder for Systematic Data-to-Model Workflow	3
Fireworks explosion boosted Harris Hawks optimization for numerical optimization: Case of classifying the severity of COVID-19	3
An enhanced ant colony optimizer with Cauchy-Gaussian fusion and novel movement strategy for multi-threshold COVID-19 X-ray image segmentation	3
Modeling Brain Volume Using Deep Learning-Based Physical Activity Features in Patients With Dementia	3
NIDM-Terms: community-based terminology management for improved neuroimaging dataset descriptions and query	3
Editorial: Advanced EEG analysis techniques for neurological disorders	3
Brian2CUDA: Flexible and Efficient Simulation of Spiking Neural Network Models on GPUs	3
In silico analyses of the involvement of GPR55, CB1R and TRPV1: response to THC, contribution to temporal lobe epilepsy, structural modeling and updated evolution	3
A scoping review of mathematical models covering Alzheimer's disease progression	3
Deploying and Optimizing Embodied Simulations of Large-Scale Spiking Neural Networks on HPC Infrastructure	3
An optimized framework for processing multicentric polysomnographic data incorporating expert human oversight	3
Mitigating Computer Limitations in Replicating Numerical Simulations of a Neural Network Model With Hodgkin-Huxley-Type Neurons	3
An accessible and versatile deep learning-based sleep stage classifier	3
The Locare workflow: representing neuroscience data locations as geometric objects in 3D brain atlases	3
NeuroDecodeR: a package for neural decoding in R	3
DR-IIXRN : Detection Algorithm of Diabetic Retinopathy Based on Deep Ensemble Learning and Attention Mechanism	3
Harmonizing AI governance regulations and neuroinformatics: perspectives on privacy and data sharing	3
Novel methods for elucidating modality importance in multimodal electrophysiology classifiers	3
Embedding Functional Brain Networks in Low Dimensional Spaces Using Manifold Learning Techniques	3