OOIR: Observatory of International Research

Papers

(The H4-Index of Frontiers in Microbiology is 86. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-01-01 to 2026-01-01.)

Article	Citations
Corrigendum: Combined effects of host genetics and diet on porcine intestinal fungi and their pathogenic genes	777
Aniline-induced production of aniline-containing polyketides and related bicyclic polyketides by the Yellow River wetland-derived fungus Talaromyces funiculosus	665
Characterization of Rosculus vilicus sp. nov., a rhizarian amoeba interacting with Mycobacterium avium subsp. paratuberculosis	547
Suppression of Aspergillus fumigatus Germination by Neutrophils Is Enhanced by Endothelial-Derived CSF3 Production	423
Corrigendum: Understanding the burden of antibiotic resistance: a decade of carbapenem-resistant Gram-negative bacterial infections in Italian intensive care units	387
Unravelling copper effect on the production of varietal thiols during Colombard and Gros Manseng grape juices fermentation by Saccharomyces cerevisiae	355
Different characteristics of the soil in marmot habitats might be one of the factors that influcting Yersinia pestis prevalent in which than pikas	302
Comparative analysis of the leprosy detection rate regarding its clinical spectrum through PCR using the 16S rRNA gene: a scientometrics and meta-analysis	283
Virus-specific Dicer-substrate siRNA swarms inhibit SARS-CoV-2 infection in TMPRSS2-expressing Vero E6 cells	275
Editorial: Biotechnological Applications of Yeasts in Beverages and Food: From Fermentation to Innovation	263
Corrigendum: Molecular Analysis of Bacterial Isolates From Necrotic Wheat Leaf Lesions Caused by Xanthomonas translucens, and Description of Three Putative Novel Species, Sphingomonas albertensis sp.	260
Comprehensive effects of fecal microbiota transplantation on cynomolgus macaques across various fecal conditions	229
Non-structure protein ORF1ab (NSP8) in SARS-CoV-2 contains potential γδT cell epitopes	223
Soil mycobiomes in native European aspen forests and hybrid aspen plantations have a similar fungal richness but different compositions, mainly driven by edaphic and floristic factors	219
Prevalence of multidrug-resistant Escherichia coli isolates and virulence gene expression in poultry farms in Jos, Nigeria	215
Editorial: Microbial regulatory mechanisms in remediation of industrial wastewater and contaminated soils	212
Editorial: Morels: physiology, genetics, and interactions with the environment	191
Editorial: Microbial advances towards sustainable environment: Microbiome structure & integrated technologies	183
Mycobiome structure does not affect field litter decomposition in Eucalyptus and Acacia plantations	179
Protective effect of chicken yolk antibody Y against Campylobacter jejuni induced diarrhea in cats	171
Editorial: Women in infectious agents and disease: 2023	169
Editorial: The effect of mycobiomes on health of forest trees	166
The biogeography of gastrointestinal mucosal microbiota of beef cattle at harvest	165
Editorial: Cellular nanomotion as a new signature of life	165
Feeding systems influence the rumen resistome in yaks by changing the microbiome	165

Application of transposon insertion site sequencing method in the exploration of gene function in microalgae	161
Identification and molecular detection of the pathogen of Phalaenopsis leaf yellowing through genome analysis	158
Genomic surveillance of genes encoding the SARS-CoV-2 spike protein to monitor for emerging variants on Jeju Island, Republic of Korea	157
Genomic and Biocontrol Potential of the Crude Lipopeptide by Streptomyces bikiniensis HD-087 Against Magnaporthe oryzae	152
Loss of submerged macrophytes in shallow lakes alters bacterial and archaeal community structures, and reduces their co-occurrence networks connectivity and complexity	149
Gut microbiota assemblages of generalist predators are driven by local- and landscape-scale factors	142
Response of serum biochemical profile, antioxidant enzymes, and gut microbiota to dietary Hong-bailanshen supplementation in horses	140
Dynamic Phycobilin Pigment Variations in Diazotrophic and Non-diazotrophic Cyanobacteria Batch Cultures Under Different Initial Nitrogen Concentrations	140
Nourishing neonatal piglets with synthetic milk and Lactobacillus sp. at birth highly modifies the gut microbial communities at the post-weaning stage	133
Combined transcriptomics and metabolomics analyses reveal the molecular mechanism of heat tolerance in Pichia kudriavzevii	130
Editorial: Plants surviving in extreme environment: harnessing soil-plant–microbial relationship to enhance crop health and productivity	123
Evaluation and validation of extensive growth and growth boundary models for mesophilic and psychrotolerant Bacillus cereus in dairy products (Part 2)	121
Development and evaluation of a rapid RPA/CRISPR-based detection of Francisella tularensis	119
Corrigendum: Improvement of antioxidant activity and active ingredient of Dendrobium officinale via microbial fermentation	119
Structural and biochemical elucidation of class I hybrid cluster protein natively extracted from a marine methanogenic archaeon	119
Cell entry of bovine respiratory syncytial virus through clathrin-mediated endocytosis is regulated by PI3K-Akt and Src-JNK pathways	119
Multi-gene phylogeny and taxonomy of the genus Bannoa with the addition of three new species from central China	117
A global bibliometric and visualized analysis of bacterial biofilm eradication from 2012 to 2022	117
Exploiting the roles of nitrogen sources for HEA increment in Cordyceps cicadae	115
Correction: Identification, functional analysis, and clinical applications of defective viral genomes	115
Positive effects of molybdenum on the biomineralization process on the surface of low-alloy steel catalyzed by Bacillus subtilis	115
Phenotypic and transcriptional characterization of F. tularensis LVS during transition into a viable but non-culturable state	114
Effects of ciprofloxacin on bacterial abundance and enrichments in samples taken from the sea surface microlayer and underlying waters in the southern North Sea	114
Impact of fasting and refeeding on immune markers, hepatic gene expression, and gut microbiota in geese: insights into metabolic regulation and gut-liver interactions	114
The Zinc-Finger protein ZCCHC3 inhibits LINE-1 retrotransposition	112
Toxic Factors of Lead and Cadmium Fit in the Ecological Risk Assessment for Microorganisms	112
Editorial: New Insights Into the Transmission Dynamics and Control of Antimicrobial Resistance to Last-Resort Antibiotics	112
Campylobacter fetus foodborne illness outbreak in the elderly	110
Editorial: Immunometabolic crosstalk during viral infection	107
Global characteristics and trends in research on Candida auris	105
Temporal Alignment of Longitudinal Microbiome Data	105
Dysregulated NAD(H) homeostasis associated with ciprofloxacin tolerance in Escherichia coli investigated on a single-cell level with the Peredox [NADH:NAD+] biosensor	103
Effect of conjugative transfer of antibiotic resistance genes mediated by plasmids on the microecology of different intestinal segments	102
Physiological variations in hypovirus-infected wild and model long-term laboratory strains of Cryphonectria parasitica	102
The effects of ambient temperature and feeding regimens on cecum bacteria composition and circadian rhythm in growing rabbits	102
Ackermannviridae bacteriophage against carbapenem-resistant Klebsiella pneumoniae of capsular type 64	100
Microbial removal of nutrients from anaerobic digestate: assessing product-coupled and non-product-coupled approaches	99
One-pot biosynthesis of N-acetylneuraminic acid from chitin via combination of chitin-degrading enzymes, N-acetylglucosamine-2-epimerase, and N-neuraminic acid aldolase	98
Lactiplantibacillus plantarum improves the growth performance and meat quality of broilers by regulating the cecal microbiota and metabolites	97
Litter mixing promoted decomposition rate through increasing diversities of phyllosphere microbial communities	96
Corrigendum: Probiotic effects on skin health: comprehensive visual analysis and perspectives	95
Mapping the research landscape of immune response in human brucellosis: a bibliometric analysis	95
Study on the mechanism of peanut resistance to Fusarium oxysporum infection induced by Bacillus thuringiensis TG5	95
Editorial: Microbe-nanoparticle interactions: a mechanistic approach	94
smu_1558c-mediated regulation of growth and biofilm formation in Streptococcus mutans	94
Detection and Characterization of Carbapenemases in Enterobacterales With a New Rapid and Simplified Carbapenemase Detection Method Called rsCDM	94
Reconstruction of the Evolutionary Origin, Phylodynamics, and Phylogeography of the Porcine Circovirus Type 3	91
A computational model for potential microbe–disease association detection based on improved graph convolutional networks and multi-channel autoencoders	91
Biocontrol potential of endophytic Bacillus subtilis A9 against rot disease of Morchella esculenta	91
Occurrence and characterization of β-lactamase-producing bacteria in biomedical wastewater and in silico enhancement of antibiotic efficacy	91

Genetically predicted the causal relationship between gut microbiota and the risk of polymyositis/dermatomyositis: a Mendelian randomization analysis	91
Serotype distribution and antimicrobial susceptibility of Streptococcus pneumoniae isolates cultured from Japanese adult patients with community-acquired pneumonia in Goto City, Japan	91
Exploring the fungal community structure and assembly in different tissues of Gymnadenia conopsea	90
Deciphering of differences in gut microbiota and plasma metabolites profile between non-obese and obese Golden Retrievers dogs	89
Global quantitative proteome analysis of a multi-resistant Klebsiella pneumoniae strain	89
Assessment of the Transmission Dynamics of Clostridioides difficile in a Farm Environment Reveals the Presence of a New Toxigenic Strain Connected to Swine Production	89
Membrane and Extracellular Matrix Glycopolymers of Colwellia psychrerythraea 34H: Structural Changes at Different Growth Temperatures	88
Seasonal dynamics of free-living (FL) and particle-attached (PA) bacterial communities in a plateau reservoir	88
A Novel Lineage of Cile-Like Viruses Discloses the Phylogenetic Continuum Across the Family Kitaviridae	88
Genome-Wide Identification of Cellular Pathways and Key Genes That Respond to Sodium Bicarbonate Stress in Saccharomyces cerevisiae	87
Application progress of CRISPR/Cas9 genome-editing technology in edible fungi	87
Gut Bacterial Composition and Functional Potential of Tibetan Pigs Under Semi-Grazing	86
Sub-MIC antibiotics increased the fitness cost of CRISPR-Cas in Acinetobacter baumannii	86
Effects from supplementary feeding of bamboo powder in perinatal period on farrowing process, serum biochemical indexes, and fecal microbes of sows and offspring piglets	86
A streamlined method to determine the antibiotic resistance of plaque-forming predatory bacteria	86
Bt GS57 Interaction With Gut Microbiota Accelerates Spodoptera exigua Mortality	86