Journal of Genetics and Genomics

Article	Citations
Local trafficking and long-distance transport of small RNAs in plants	265
Finding unknown species in the genomes of extant species	229
Functional analysis of the emerging roles for the KISS1/KISS1R signaling pathway in cancer metastasis	229
RCAN family member 3 deficiency contributes to noncompaction of the ventricular myocardium	209
RNA-binding motif protein RBM47 promotes tumorigenesis in nasopharyngeal carcinoma through multiple pathways	184
The ZFP541-KCTD19 complex is essential for pachytene progression by activating meiotic genes during mouse spermatogenesis	143
AMPK controls sucrose taste sensitization in Drosophila	139
Active DNA demethylation regulates MAMP-triggered immune priming in Arabidopsis	90
Maternal genetic history of southern East Asians over the past 12,000 years	86
Hd1, Ghd7, and DTH8 synergistically determine the rice heading date and yield-related agronomic traits	62
High-quality genome of Firmiana hainanensis provides insights into the evolution of Malvaceae subfamilies and the mechanism of their wood density formation	55
Single-cell transcriptome atlas of the leaf and root of rice seedlings	54
Building a cattle pan-genome using more de novo assemblies	52
Near-complete de novo genome assemblies of tomato (Solanum lycopersicum) determinate cultivars Micro-Tom and M82	52
Ether phospholipids govern ferroptosis	48
OsLTP47 may function in a lipid transfer relay essential for pollen wall development in rice	46
Neutrophils disrupt the intestinal barrier via IL-22/TGF-β/Mmp9 axis in the zebrafish model of inflammatory bowel disease	40
Gene therapy and gene editing strategies in inherited blood disorders	40
A mesenchymal-like subpopulation in non-neuroendocrine SCLC contributes to metastasis	38
Molecular cytogenetic map visualizes the heterozygotic genome and identifies translocation chromosomes in Citrus sinensis	38
Erratum to “GenomeSyn: A bioinformatics tool for visualizing genome synteny and structural variations” [J. Genet. Genom. 49 (2022) 1174–1176]	38
The composition, function, and regulation of adipose stem and progenitor cells	37
The transcription factor Sox30 is involved in Nile tilapia spermatogenesis	36
Deciphering the influence of gut and oral microbiomes on menopause for healthy aging	36
Bmelo12, an elongase of very long-chain fatty acids gene, regulates silk yield in Bombyx mori	36

The CXCR4-CXCL12 axis promotes T cell reconstitution via efficient hematopoietic immigration	36
Von Hippel-Lindau tumor suppressor pathways & corresponding therapeutics in kidney cancer	35
Ectopic expression of Myomaker and Myomixer in slow muscle cells induces slow muscle fusion and myofiber death	34
Aberrant nuclear lamina contributes to the malignancy of human gliomas	33
The S100 calcium binding protein A11 promotes liver fibrogenesis by targeting TGF-β signaling	33
TMEM63B regulates postnatal development of cochlear sensory epithelia via thyroid hormone signaling	32
ERVcancer: a web resource designed for querying activation of human endogenous retroviruses across major cancer types	31
An LRR-RLK protein modulates drought- and salt-stress responses in maize	30
Infection of SARS-CoV-2 causes severe pathological changes in mouse testis	30
Gap-free genome assembly and metabolomics analysis of common bean provide insights into genomic characteristics and metabolic determinants of seed coat pigmentation	29
NCAD v1.0: a database for non-coding variant annotation and interpretation	27
Corrigendum to “AMPK controls sucrose taste sensitization in Drosophila” [Journal of Genetics and Genomics (2023) 50, 50–53]	27
Identification of QTL-by-environment interaction by controlling polygenic background effect	27
Ancestral genome reconstruction and the evolution of chromosomal rearrangements in Triticeae	27
Understanding the mechanistic regulation of ferroptosis in cancer: the gene matters	26
VdMKK1-mediated cell wall integrity is essential for virulence in vascular wilt pathogen Verticillium dahliae	25
Genetic structure and domestication footprints of the tusk, coat color, and ear morphology in East Chinese pigs	25
3D landscape reorganization in response to feeding preferences adaptation in the youngest split Gymnocypris fish	25
Unveiling cell-type-specific mode of evolution in comparative single-cell expression data	24
Activation of γ-globin expression by a common variant disrupting IKAROS-binding motif in β-thalassemia	24
The genetic control of glabrous glume during African rice domestication	24
Capn3b-deficient zebrafish model reveals a key role of autoimmune response in LGMDR1	24
A critical evaluation of deep-learning based phylogenetic inference programs using simulated datasets	23
Znf706 regulates germ plasm assembly and primordial germ cell development in zebrafish	23
VSOLassoBag: a variable-selection oriented LASSO bagging algorithm for biomarker discovery in omic-based translational research	23
ccdc141 is required for left-right axis development by regulating cilia formation in the Kupffer's vesicle of zebrafish	23
Altered gut microbiome in FUT2 loss-of-function mutants in support of personalized medicine for inflammatory bowel diseases	22
BAP60 plays an opposite role to the MRT-NURF complex in regulating lipid droplet size	22
The Magnaporthe oryzae effector MoCHT1 targets and stabilizes rice OsLLB to suppress jasmonic acid synthesis and enhance infection	22
Sequence motifs and prediction model of GBE editing outcomes based on target library analysis and machine learning	22
Transcription factors BnaC09.FUL and BnaC06.WIP2 antagonistically regulate flowering time under long-day conditions in Brassica napus	21
Variation in the promoter of OsNPF7.1 contributes to nitrate uptake, remobilization, and grain yield in upland rice	21
Absence of Serpinb6a causes progressive hair cell apoptosis and hearing loss in mice	21
Nitrogen inhibition of nitrogenase activity involves the modulation of cytosolic invertase in soybean nodule	21
Epigenetic variation in maize agronomical traits for breeding and trait improvement	21
Natural variation of CT2 affects the embryo/kernel weight ratio in maize	21
Coordinated regulation of cortical astrocyte maturation by OLIG1 and OLIG2 through BMP7 signaling modulation	21
CancerSRT: a spatially resolved transcriptomics database for human cancers	21
Characterizing structural variants based on graph-genotyping provides insights into pig domestication and local adaption	20
Triticeae-BGC: a web-based platform for detecting, annotating and evolutionary analysis of biosynthetic gene clusters in Triticeae	20
microRNA-2184 orchestrates Mauthner-cell axon regeneration in zebrafish via syt3 modulation	20
Thyroid-stimulating hormone-thyroid hormone signaling contributes to circadian regulation through repressing clock2/npas2 in zebrafish	20
A human-specific cytotoxic neopeptide generated by the deafness gene Cingulin	20
Fli1 acts in parallel with Pu.1 to control macrophage and neutrophil fate in zebrafish	20
Diverse functions of sex determination gene doublesex on sexually dimorphic neuronal development and behaviors	19
Fulminant myocarditis induced by SARS-CoV-2 infection without severe lung involvement: insights into COVID-19 pathogenesis	19
Reconstructing cell lineage trees with genomic barcoding: approaches and applications	19
Stomatal maturomics: hunting genes regulating guard cell maturation and function formation from single-cell transcriptomes	19
Polycomb-group proteins in the initiation and progression of cancer	19
Constructing the metabolic network of wheat kernels based on structure-guided chemical modification and multi-omics data	19

IMAGGS: a radiogenomic framework for identifying multi-way associations in breast cancer subtypes	19
CDCP: a visualization and analyzing platform for single-cell datasets	19
TaxonKit: A practical and efficient NCBI taxonomy toolkit	18
Synchronized lineage tracing of cell membranes and nuclei by dual recombinases and dual fluorescent	18
Homozygous nonsense variants of KCTD19 cause male infertility in humans and mice	18
Single-cell RNA-Seq reveals transcriptional regulatory networks directing the development of mouse maxillary prominence	18
Two ABCI family transporters, OsABCI15 and OsABCI16, are involved in grain-filling in rice	18
Migration and proliferation of ductal cells promote pancreatic repair after trauma	18
Biallelic MED16 variants disrupt neural development and lead to an intellectual disability syndrome	18
A gain-of-function variant in RICTOR predisposes to human obesity	17
GRB10 regulates β-cell mass by inhibiting β-cell proliferation and stimulating β-cell dedifferentiation	17
Genetics of anorexia nervosa: An overview of genome-wide association studies and emerging biological links	17
Phylogeny and sex chromosome evolution of Palaeognathae	17
Chemical screening reveals Ronidazole is a superior prodrug to Metronidazole for nitroreductase-induced cell ablation system in zebrafish larvae	17
Development of a haploid inducer by editing HvMTL in barley	16
Genomic insights into the genetic diversity, lateral gaits and high-altitude adaptation of Chakouyi (CKY) horses	16
Characteristics of TP53 germline variants and their correlations with Li-Fraumeni syndrome or Li-Fraumeni-like syndrome in Chinese tumor patients	16
The power of “controllers”: Transposon-mediated duplicated genes evolve towards neofunctionalization	16
Mammary stem cells: molecular cues, orchestrated regulatory mechanisms and its implications in breast cancer	16
An efficient metatranscriptomic approach for capturing RNA virome and its application to SARS-CoV-2	16
Nitrogen assimilation in plants: current status and future prospects	16
Identification of FUT7 hypomethylation as the blood biomarker in the prediction of early-stage lung cancer	16
Phenotypic advantages and improved genomic stability following selection in advanced selfing-generations of Brassica allohexaploids	16
Both gain- and loss-of-function variants of KCNA1 are associated with paroxysmal kinesigenic dyskinesia	16
Comparative study of gut microbiota from captive and confiscated-rescued wild pangolins	15
Ancient mitochondrial genome depicts sheep maternal dispersal and migration in Eastern Asia	15
Root-derived long-distance signals trigger ABA synthesis and enhance drought resistance in Arabidopsis	15
The HuaBiao project: whole-exome sequencing of 5000 Han Chinese individuals	15
Mycobacterium Lrp/AsnC family transcriptional factor modulates the arginase pathway as both a sensor and a transcriptional repressor	15
Micro-coevolution of host genetics with gut microbiome in three Chinese ethnic groups	15
Two diversities meet in the rhizosphere: root specialized metabolites and microbiome	15
AtPQT11, a P450 enzyme, detoxifies paraquat via N-demethylation	15
The camphor tree genome enhances the understanding of magnoliid evolution	15
Protein post-translational modifications in auxin signaling	15
Whole-genome sequencing reveals selection signals among Chinese, Pakistani, and Nepalese goats	14
S-sulfenylation-mediated inhibition of the GSNOR1 activity regulates ovule development in Arabidopsis	14
GeMemiOM: the curated database on genes, putative methylation study targets, and microRNA targets for otitis media	14
Mesenteric lymph system constitutes the second route in gut–liver axis and transports metabolism-modulating gut microbial metabolites	13
OsbZIP27 coordinates with OsHUB1 and OsHUB2 to modulate drought tolerance in rice	13
ROS is essential for initiation of energy deprivation-induced autophagy	13
Combining single-cell profiling and functional analysis explores the role of pseudogenes in human early embryonic development	13
Corrigendum to “Root-derived long-distance signals trigger ABA synthesis and enhance drought resistance in Arabidopsis” [Journal of Genetics and Genomics (2024) 51, 749–761]	13
Synergy of gut microbiota and host genome in driving heterosis expression of chickens	13
Genetic basis of geographical differentiation, breeding selection, domestication effects, and breeding application for TaJAZ1 in wheat	13
LIMK2 is required for membrane cytoskeleton reorganization of contracting airway smooth muscle	13
Dosage effect genes modulate grain development in synthesized Triticum durum-Haynaldia villosa allohexaploid	13
Genome-wide analysis of Q binding reveals a regulatory network that coordinates wheat grain yield and grain protein content	12
Rare variants in FANCJ induce premature ovarian insufficiency in humans and mice	12
Addition of the T5 exonuclease increases the prime editing efficiency in plants	12
Understanding and enhancing rice resistance to false smut disease	12
A simple and precise method (Y2H-in-frame-seq) improves yeast two-hybrid screening with cDNA libraries	12
CCDC181 is required for proper spermiogenesis in mice	12
Delineating the longitudinal tumor evolution using organoid models	11
Microbiota-mediated shaping of mouse spleen structure and immune function characterized by scRNA-seq and Stereo-seq	11
DPB3 and DPB4 proteins regulate Medicago flowering and leaf anthocyanin biosynthesis	11
Toll-9 prevents the proliferation of injected oncogenic cells in adult flies	11
Loss of lims1 causes aberrant cardiac remodeling and heart failure via activating gp130/Jak1/Stat3 pathway in zebrafish	11
Corrigendum to “Biogenesis of autophagosomes from the ERGIC membrane system” [Journal of Genetics and Genomics (2023) 50, 3–6]	11
Genomic analyses reveal distinct genetic architectures and selective pressures in Chinese donkeys	11
The local density of H3K9me3 dictates the stability of HP1α condensates-mediated genomic interactions	11
Deciphering the evolution and complexity of wheat germplasm from a genomic perspective	11
A hypothetical model of trans-acting R-loops-mediated promoter-enhancer interactions by Alu elements	11
Current therapies for osteoarthritis and prospects of CRISPR-based genome, epigenome, and RNA editing in osteoarthritis treatment	11
Nutritional geometry framework of sucrose taste in Drosophila	11
A multi-ancestry GWAS meta-analysis of facial features and its application in predicting archaic human features	11
The interplay between extracellular and intracellular auxin signaling in plants	10
VT3D: a visualization toolbox for 3D transcriptomic data	10
O-GlcNAcylation regulates phagocytosis by promoting Ezrin localization at the cell cortex	10
Long-read sequencing and de novo assembly of the cynomolgus macaque genome	10
Localized production of LECT2 by orthotopic histiocytes during inflammation	10
Epigenetic control of plant abiotic stress responses	10
COL: a method for identifying putatively functional circular RNAs	10
ADGAP: a user-friendly online Ancient DNA Database and Genome Analysis Platform	10
Translation machinery: the basis of translational control	10
Cdx1b protects intestinal cell fate by repressing signaling networks for liver specification	10
TabHLH95-TaNF-YB1 module promotes grain starch synthesis in bread wheat	9
Pathogenic TDRD12 variants cause defective piRNA pathway and male infertility in humans and mice	9
Characterization of heavy-chain antibody gene repertoires in Bactrian camels	9
Crop root system architecture in drought response	9
Laser capture microdissection for biomedical research: towards high-throughput, multi-omics, and single-cell resolution	9

Polyamine oxidase 3 is involved in salt tolerance at the germination stage in rice	9
The rice histone methylation regulates hub species of the root microbiota	9
The shikimate pathway regulates programmed cell death	9
Ccdc57 is required for straightening the body axis by regulating ciliary motility in the brain ventricle of zebrafish	9
Developmental regulation of neuronal gene expression by Elongator complex protein 1 dosage	9
Identification of novel loci influencing refractive error in East Asian populations using an extreme phenotype design	9
Overexpression of CRYPTOCHROME 2 enhances shoot growth and wood formation in poplar under growth-restrictive short days	8
New insights into the dispersion history and adaptive evolution of taxon Aegilops tauschii in China	8
Genome-wide profiling of polymorphic short tandem repeats and their influence on gene expression and trait variation in diverse rice populations	8
Systematic identification and screening of functional long noncoding RNAs during planarian regeneration	8
The SNAPc complex mediates starvation-induced trans-splicing in Caenorhabditis elegans	8
Phosphorylation of ATF2 promotes odontoblastic differentiation via intrinsic HAT activity	8
TMEM39A and TMEM131 facilitate bulk transport of ECM proteins through large COPII vesicle formation	8
Near-gapless telomere-to-telomere reference nuclear genome and variable mitochondrial genome of Amborella trichopoda	8
Decoding transcriptional regulation via a human gene expression predictor	8
The landscape and clinical relevance of intronic polyadenylation in human cancers	8
Genome-wide association analysis reveals regulatory genes for the metabolite synthesis of 2-acetyl-1-pyrroline in aromatic coconut (Cocos nucifera L.)	8
Maize plastid terminal oxidase (ZmPTOX) regulates the color formation of leaf and kernel by modulating plastid development	8
Two zinc-finger proteins control the initiation and elongation of long stalk trichomes in tomato	8
Retina cell atlases of multiple species and an online platform for retina cell-type markers	8
The lawc gene emerged de novo from conserved genomic elements and acquired a broad expression pattern in Drosophila	8
Genetic and molecular mechanisms of reproductive isolation in the utilization of heterosis for breeding hybrid rice	8
Newborn screening with targeted sequencing: a multicenter investigation and a pilot clinical study in China	8
Emerging roles of phosphoinositide-associated membrane trafficking in plant stress responses	8
Whole-genome sequence-based association study for immune cells in an eight-breed pig heterogeneous population	8
PI3K/Akt/mTOR signaling orchestrates the phenotypic transition and chemo-resistance of small cell lung cancer	8
Genomic allele-specific base editing with imperfect gRNA	8
Viral receptor profiles of masked palm civet revealed by single-cell transcriptomics	8
Wide hybridizations reveal the robustness of functional centromeres in Triticum–Aegilops species complex lines	8
Genome engineering of the human gut microbiome	7
Wheat PKL genes regulate pre-harvest sprouting and yield-related traits	7
Natural selection shaped the protective effect of the mtDNA lineage against obesity in Han Chinese populations	7
Delta.EPI: a probabilistic voting-based enhancer–promoter interaction prediction platform	7
Rab1 and Syntaxin 17 regulate hematopoietic homeostasis through β-integrin trafficking in Drosophila	7
Nuclear encoded elongation factor EF-Tu is required for chloroplast development in rice grown under low-temperature conditions	7
Corrigendum to “Actin polymerization induces mitochondrial distribution during collective cell migration” [Journal of Genetics and Genomics (2023) 50 46–49]	7
Revealing extensive inbreeding and less efficient purging of deleterious mutations in wild Amur tigers in China	7
Functionalized gadofullerene ameliorates impaired glycolipid metabolism in type 2 diabetic mice	7
Genome-editing of a circadian clock gene TaPRR95 facilitates wheat peduncle growth and heading date	7
Evidence for a mouse origin of the SARS-CoV-2 Omicron variant	7
The HISTONE ACETYLTRANSFERASE 1 interacts with CONSTANS to promote flowering in Arabidopsis	7
Corrigendum to “Absence of Serpinb6a causes progressive hair cell apoptosis and hearing loss in mice” [Journal of Genetics and Genomics (2023) 50, 122–125]	7
Genetic variations in ZmEREB179 are associated with waterlogging tolerance in maize	7
Genetic evidence for facial variation being a composite phenotype of cranial variation and facial soft tissue thickness	7
Neolithic to Bronze Age human maternal genetic history in Yunnan, China	7
Variants in the Wnt co-receptor LRP6 are associated with familial exudative vitreoretinopathy	7
Calcium channels at the center of nucleotide-binding leucine-rich repeat receptor-mediated plant immunity	7
TMEM181: a key mediator of cytolethal distending toxin required for Wnt signaling activity	7
Natural variations in grain length 10 (GL10) regulate rice grain size	7
TAZ inhibits SCLC metastasis through GALNT18-mediated O-glycosylation	7
TaNPF6.2 improves agronomic traits via enhancing nitrogen uptake efficiency in wheat	7
Fixation of hybrid sterility genes and favorable alleles of key yield-related genes with dominance contribute to the high yield of the Yongyou series of intersubspecific hybrid rice	7
A tunable genome editing system of the prime editor mediated by dihydrofolate reductase	7
m6A-modified RNAs possess distinct poly(A) tails	7
The m6A reader YTHDC2 maintains visual function and retinal photoreceptor survival through modulating translation of PPEF2 and PDE6B	7
Maternal genetic structure of a neolithic population of the Yangshao culture	7
The OsCLV2s-OsCRN1 co-receptor regulates grain shape in rice	7
High-throughput base editing KO screening of cellular factors for enhanced GBE	7
Improved in situ sequencing for high-resolution targeted spatial transcriptomic analysis in tissue sections	7
Recombination and repeat-induced point mutation landscapes reveal trade-offs between the sexual and asexual cycles of Magnaporthe oryzae	6
Two imprinted genes primed by DEMETER in the central cell and activated by WRKY10 in the endosperm	6
G-quadruplexes in genomes of viruses infecting eukaryotes or prokaryotes are under different selection pressures from hosts	6
Differential regulation of JAK1 expression by ETS1 associated with predisposition to primary biliary cholangitis	6
Haplotype-resolved and chromosome-level genome assembly of Colorado potato beetle	6
A novel PCYT2 mutation identified in a Chinese consanguineous family with hereditary spastic paraplegia	6
CircPTEN-MT from PTEN regulates mitochondrial energy metabolism	6
Single-cell transcriptomics reveals cell type diversity of human prostate	6
Genetic diversity and population structure of Leptosphaeria maculans isolates in Western Canada	6
Divergent expression of Neurl3 from hemogenic endothelial cells to hematopoietic stem progenitor cells during development	6
Zfp281 is essential for epiblast maturation through a cell autonomous effect	6
Age-dependent genetic architectures of chicken body weight explored by multidimensional GWAS and molQTL analyses	6
bmp10 maintains cardiac function by regulating iron homeostasis	6
A heavy metal transporter gene ZmHMA3a promises safe agricultural production on cadmium-polluted arable land	6
PPR21 is involved in the splicing of nad2 introns via interacting with PPR-SMR1 and SPR2 and is essential to maize seed development	6
Emerging functions of tRNA modifications in mRNA translation and diseases	6
OsMLH1 interacts with OsMLH3 to regulate synapsis and interference-sensitive crossover formation during meiosis in rice	6
Assessing the efficacy and safety of gemcitabine-induced thrombocytopenia/neutropenia and thrombocytopenia interventions in zebrafish	6
The phospholipid scramblase PLSCR5 is regulated by POU4F3 and required for hair cell stereocilia homeostasis and auditory functions	6
Chromosome-scale genomes of Quercus sichourensis and Quercus rex provide insights into the evolution and adaptation of Fagaceae	6
Gut microbiota, inflammation, and molecular signatures of host response to infection	6
Xgr is involved in body size control in Drosophila through promoting glucose uptake in the Malpighian tubules	6
Tongue-coating microbiome reflects cardiovascular health and determines outcome in blood pressure intervention	6
Improvement of wheat drought tolerance through editing of TaATX4 by CRISPR/Cas9	5
PICOTEES: a privacy-preserving online service of phenotype exploration for genetic-diagnostic variants from Chinese children cohorts	5
H3K36me3 and H2A.Z coordinately modulate flowering time in Arabidopsis	5
DAIS: a method for identifying spatial domains based on density clustering of spatial omics data	5
Chemotherapy suppresses SHH gene expression via a specific enhancer	5
Exome-wide variation in a diverse barley panel reveals genetic associations with ten agronomic traits in Eastern landraces	5
Adipose Rheb deficiency promotes miR-182-5p expression via the cAMP/PPARγ signaling pathway	5
Efficient silencing of the multicopy DUX4 gene by ABE-mediated start codon mutation in human embryos	5
Interruption of Klf5 acetylation in basal progenitor cells promotes luminal commitment by activating Notch signaling	5
Pinpointing the animal origins of SARS-CoV-2: a genomic approach	5
Genetic interaction network of quantitative trait genes for heading date in rice	5
Corrigendum to ‘The power of “controllers”: Transposon-mediated duplicated genes evolve towards neofunctionalization’ [Journal of Genetics and Genomics (2023) 50, 462–472]	5
Alternations in the gut microbiota and metabolome with newly diagnosed unstable angina	5