Molecular Plant

Article	Citations
Temperature regulation of CLAVATA3 arabinosylation	2520
A solo-LTR insertion in the CreTPS3a promoter enhances γ -terpinene biosynthesis and affects consumer preference for tangerine-like aroma in citrus fruits	324
“Je t'aime moi non plus": A love-hate relationship between iron and phosphate	319
From plastids to the cytosol: Redefining boundaries for provitamin A biofortification in plants	280
Breaking the interspecific reproductive barriers in Brassicaceae	256
Structural basis of RLP activation by a pathogen glycoside hydrolase	244
Identification and biosynthesis of plant papanridins, a group of novel oligomeric flavonoids	236
Temperature-dependent regulation of seed dormancy	211
Long-read sequencing (method of the year 2022): The way forward for plant omics research	195
Vacuolar H+-ATPase and BZR1 form a feedback loop to regulate the homeostasis of BR signaling in Arabidopsis	187
Mitigating growth-stress tradeoffs via elevated TOR signaling in rice	179
Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly	177
Chloroplast immunity: A cornerstone of plant defense	177
CRISPR-Cas-based plant genome engineering goes viral	164
Plant triterpenoid saponins function as susceptibility factors to promote the pathogenicity of Botrytis cinerea	163
Genomic insights into the genetic basis of cotton breeding in China	158
Antagonistic regulation of systemin signaling acts on ligands and receptors	155
Alternative splicing of OsNPR3 promoted by the bacterial TAL effectors-targeted splicing regulator OsRBP11 antagonizes OsNPR1 function and enhances disease susceptibility in rice	155
An endophytic fungus interacts with the defensin-like protein OsCAL1 to regulate cadmium allocation in rice	148
SCOOP10 and SCOOP12 peptides act through MIK2 receptor-like kinase to antagonistically regulate Arabidopsis leaf senescence	145
Efficient and multiplex gene upregulation in plants through CRISPR-Cas-mediated knockin of enhancers	143
Warm temperature activates the TCP15-HDA4 module to suppress shoot branching by promoting auxin biosynthesis and signaling in tomato	133
Woody plant cell walls: Fundamentals and utilization	129
Rice metabolic regulatory network spanning the entire life cycle	125
A new oxidative pathway of nitric oxide production from oximes in plants	121

The OsNAC23-Tre6P-SnRK1a feed-forward loop regulates sugar homeostasis and grain yield in rice	118
Rice Gene Index: A comprehensive pan-genome database for comparative and functional genomics of Asian rice	117
A telomere-to-telomere gap-free assembly of soybean genome	114
Structural variation (SV)-based pan-genome and GWAS reveal the impacts of SVs on the speciation and diversification of allotetraploid cottons	114
How ignoring market-informed crop varietal development fuels food price volatility	110
Global wild rice germplasm resources conservation alliance: World Wild-Rice Wiring	107
Mirids secrete a TOPLESS targeting protein to enhance JA-mediated defense and gossypol accumulation for antagonizing cotton bollworms on cotton plants	103
Mitophagy: From the dark into the spotlight	102
PEP7 acts as a peptide ligand for the receptor kinase SIRK1 to regulate aquaporin-mediated water influx and lateral root growth	101
SIZ1-mediated SUMOylation of CPSF100 promotes plant thermomorphogenesis by controlling alternative polyadenylation	97
Activation of multilayered plant immunity through spatiotemporal expression of Botrytis cinerea BcCrh1-derived dual epitopes	97
Duet between stress granules and glutathionylation regulates cytosolic redox state to maintain proteostasis in Arabidopsis	95
The nucleolus as a genomic safe harbor for strong gene expression in Nannochloropsis oceanica	95
Robust transcriptional indicators of immune cell death revealed by spatiotemporal transcriptome analyses	94
Salicylic acid inhibits gibberellin signaling through receptor interactions	92
A mortise–tenon joint system facilitates precise targeted DNA insertion and replacement in rice	91
The CropGPT project: Call for a global, coordinated effort in precision design breeding driven by AI using biological big data	91
A new class of receptors for plant G-proteins	91
The HB40-JUB1 transcriptional regulatory network controls gibberellin homeostasis in Arabidopsis	90
A FLASH pipeline for arrayed CRISPR library construction and the gene function discovery of rice receptor-like kinases	90
Plant and animal positive-sense single-stranded RNA viruses encode small proteins important for viral infection in their negative-sense strand	89
Wheat adaptation to environmental stresses under climate change: Molecular basis and genetic improvement	88
TBtools-II: A “one for all, all for one” bioinformatics platform for biological big-data mining	87
Population genomic analysis reveals domestication of cultivated rye from weedy rye	87
Coordinated regulation of RNA metabolism and silencing by ABA signaling in plant abiotic stress responses	87
A cryptic inhibitor of cytokinin phosphorelay controls rice grain size	87
GRP7 phase separation as an interpreter of temperature cues	87
Too SHY 2 repress	85
The protein–protein interaction landscape of transcription factors during gynoecium development in Arabidopsis	85
Making connections with cell surface auxin signaling	84
Potatome: Harnessing natural variation of potatoes	84
An epic war between an oomycete pathogen and plants	84
Haplotype-based phylogenetic analysis and population genomics uncover the origin and domestication of sweetpotato	82
The super-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread forest trees	82
PDX1.1-dependent biosynthesis of vitamin B6 protects roots from ammonium-induced oxidative stress	81
Genomic insights into stepwise selection reshaping fruit traits and male-biased selection driving hermaphroditism in papayas	80
Super graph-based pan-genome: Bringing rice functional genomic study into a new dawn	78
Plant-specific casein kinases phosphorylate and stabilize SMXL6/7/8 to suppress strigolactone signaling and promote shoot branching	76
Arabidopsis SYP121 acts as an ROP2 effector in the regulation of root hair tip growth	75
Domestication-related changes at PvMYB26 reduce pod shattering in common bean and shed light on the origins of agriculture in the Americas	74
Manipulation of photosensory and circadian signaling restricts phenotypic plasticity in response to changing environmental conditions in Arabidopsis	74
Adenosine monophosphate enhances callus regeneration competence for de novo plant organogenesis	73
Zinc in plants: Integrating homeostasis and biofortification	72
On the evolution and genetic diversity of the bread wheat D genome	72
The dual-targeted transcription factor BAI1 orchestrates nuclear and plastid gene transcription in land plants	71
How sodium gets sequestered in the vacuoles of salinized plants?	69
Interspecific plant interaction via root exudates structures the disease suppressiveness of rhizosphere microbiomes	69
Dephosphorylation and polyubiquitination of the histone variant H2AX coordinately terminate DNA damage signaling in Arabidopsis	69
The OsIMP1–OsRLK5 immunopeptide–receptor pair confers bacterial and fungal disease resistance in rice	68
Adenylate cyclases tune heat-dependent stomatal responses	68

A decoy receptor derived from alternative splicing fine-tunes cytokinin signaling in Arabidopsis	67
Ancestral genome reconstruction for studies of the green lineage	66
QT–GWAS: A novel method for unveiling biosynthetic loci affecting qualitative metabolic traits	66
Back to wild relatives for future breeding through super-pangenome	66
Uncover the mystery of pleiotropic effects of PROG1 during rice domestication	65
pH sensing in plants	65
Reprogrammable design of DELLA as a strategy to mitigate alkaline–heat stress for sustainable agriculture	62
Decoding the senses: A new player in plant–virus dynamics unveiled	62
Engineering crop resistance by manipulating disease susceptibility genes	61
Pathogen-induced methylglyoxal negatively regulates rice bacterial blight resistance by inhibiting OsCDR1 protease activity	60
The transcription factor MYB44 suppresses starch synthesis to negatively regulate grain weight and yield in wheat and rice	60
A viral movement protein targets host catalases for 26S proteasome-mediated degradation to facilitate viral infection and aphid transmission in wheat	60
Finding my way: The role of dirigent proteins in lignin assembly	59
Differentiation trajectories and biofunctions of symbiotic and un-symbiotic fate cells in root nodules of Medicago truncatula	59
The Dof transcription factor COG1 acts as a key regulator of plant biomass by promoting photosynthesis and starch accumulation	58
Improving maize seed protein content and nitrogen-use efficiency by a teosinte asparagine synthetase	58
International research initiative on genomics-guided sugarcane breeding	58
FERONIA signaling maintains cell wall integrity during brassinosteroid-induced cell expansion in Arabidopsis	58
RAF22, ABI1 and OST1 form a dynamic interactive network that optimizes plant growth and responses to drought stress in Arabidopsis	57
HDT2-mediated lysine deacetylation promotes phytochrome A degradation during photomorphogenesis in Arabidopsis	56
The lncRNA MARS modulates the epigenetic reprogramming of the marneral cluster in response to ABA	56
Elucidation and de novo reconstitution of glyceollin biosynthesis	56
A k-mer-based pangenome approach for cataloging seed-storage-protein genes in wheat to facilitate genotype-to-phenotype prediction and improvement of end-use quality	55
WGDI: A user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes	55
Small holes, big impact: Stomata in plant–pathogen–climate epic trifecta	55
Development of a widely targeted volatilomics method for profiling volatilomes in plants	55
The supercomplex formation between the chloroplast NADH dehydrogenase-like complex and photosystem I	54
Wheat-RegNet: An encyclopedia of common wheat hierarchical regulatory networks	54
Smart Breeding Platform: A web-based tool for high-throughput population genetics, phenomics, and genomic selection	54
An MCIA-like complex is required for mitochondrial complex I assembly and seed development in maize	53
Streamline unsupervised machine learning to survey and graph indel-based haplotypes from pan-genomes	53
The power of chromosome-scale, haplotype-resolved genomes	53
A chromosome-level genome assembly reveals that a bipartite gene cluster formed via an inverted duplication controls monoterpenoid biosynthesis in Schizonepeta tenuifolia	51
9,10-KODA, an α-ketol produced by the tonoplast-localized 9-lipoxygenase ZmLOX5, plays a signaling role in maize defense against insect herbivory	51
Persulfidation of host NADPH oxidase RbohB by rhizobial 3-mercaptopyruvate sulfurtransferase maintains redox homeostasis and promotes symbiotic nodulation in soybean	51
OsHYPK-mediated protein N-terminal acetylation coordinates plant development and abiotic stress responses in rice	51
Blue revolution for food security under carbon neutrality: A case from the water-saving and drought-resistance rice	51
AlphaFold-guided redesign of a plant pectin methylesterase inhibitor for broad-spectrum disease resistance	51
FERONIA-mediated TIR1/AFB2 oxidation stimulates auxin signaling in Arabidopsis	51
Wheat2035: Integrating pan-omics and advanced biotechnology for future wheat design	50
SH3P2, an SH3 domain-containing protein that interacts with both Pib and AvrPib, suppresses effector-triggered, Pib-mediated immunity in rice	50
A “protector” model for membrane trafficking-regulated and NLR-mediated plant immunity	49
Structural insights into a plant-conserved DHFR-TS reveal a selective herbicide target	49
Rice SINA E3 ligases dichotomously control ERECTA1 ubiquitination and stability to regulate panicle morphogenesis and grain yield	49
Gene editing produces CoQ10 rice	48
Coordinated Communication Among the Nucleus, Plastids, and Mitochondria	48
Cultivating potential: Harnessing plant stem cells for agricultural crop improvement	48
Establishment and functions of the Casparian strip	47
The cartography of plant immunity: Proximity labeling puts a novel SGT1–NSL1 regulatory module on the map	47
SnRK2.5-mediated phosphorylation of PIN2 links osmotic stress signaling with auxin-dependent root adaptive growth in Arabidopsis	47
Histone H4K8hib modification promotes gene expression and regulates rice immunity	46
Calcium-dependent activation of CPK12 facilitates its cytoplasm-to-nucleus translocation to potentiate plant hypoxia sensing by phosphorylating ERF-VII transcription factors	46
A top HAT: A maize mutant hypersusceptible to Agrobacterium transformation	46
Understanding source–sink interactions: Progress in model plants and translational research to crops	46
Four plasma membrane-localized MGR transporters mediate xylem Mg2+ loading for root-to-shoot Mg2+ translocation in Arabidopsis	45
A Single-Cell-Resolution Spatial Transcriptomic Atlas Decodes Wheat Spike Development and Yield Potential	45
IIIVmrMLM: The R and C++ tools associated with 3VmrMLM, a comprehensive GWAS method for dissecting quantitative traits	45
Systematic identification of wheat spike developmental regulators by integrated multi-omics, transcriptional network, GWAS, and genetic analyses	44
Regulatory dynamics of the higher-plant PSI–LHCI supercomplex during state transitions	44
Endosperm ontogeny through the lens of epigenetics	44
Nitric oxide regulation of plant metabolism	44
Two complete telomere-to-telomere genome assemblies of Medicago reveal the landscape and evolution of its centromeres	43
Design of effective synbiotics against aboveground insect herbivory through characterization of host plant rhizosphere microbiota and metabolites	43
Development and maintenance of the ligular region of maize leaves	43
Asymmetric brassinosteroid signaling and biosynthesis during symmetric cell divisions	42
Darwin’s orchid: Plant–pollinator coevolution, chemical ecology, and genomic insights into convergent evolution of floral scent biosynthesis	42
Jazzin’ up nodules: The groovy role of jasmonic acid during nodulation	42
A new phase of treasure hunting in plant genebanks	41
AraENCODE: A comprehensive epigenomic database of Arabidopsis thaliana	41
Cryo-EM structures of Arabidopsis heteromultimeric isoamylase complex essential for starch granule biogenesis	41
Rise of the ethylene biosynthesis machinery from the Cβ-S lyase	41
Mixing and matching SMXL proteins to fine-tune strigolactone responses	41
CONSTANS alters the circadian clock in Arabidopsis thaliana	41
PlantscRNAdb 4.0: Improved marker identification and annotation under a cell type uniformity for plants	40
Strigolactone-gibberellin crosstalk mediated by a distant silencer fine-tunes plant height in upland cotton	40
Posttranslational regulation of TOR kinase activity controls resource allocation between plant growth and immunity in Arabidopsis	40
Nitrate confers rice adaptation to high ammonium by suppressing its uptake but promoting its assimilation	40
Activation of stress-response genes by retrograde signaling-mediated destabilization of nuclear importin IMPα-9 and its interactor TPR2	39
Volatilome-based GWAS identifies OsWRKY19 and OsNAC021 as key regulators of rice aroma	38
Phase separation of the nuclear pore complex facilitates selective nuclear transport to regulate plant defense against pathogen and pest invasion	38

OsPRMT6a-mediated arginine methylation of OsJAZ1 regulates jasmonate signaling and spikelet development in rice	38
Root bacteria fine-tune rice tillering through phytohormone interference and mimicry	37
Low phosphorus promotes NSP1–NSP2 heterodimerization to enhance strigolactone biosynthesis and regulate shoot and root architecture in rice	37
Genetic and molecular exploration of maize environmental stress resilience: Toward sustainable agriculture	37
Specialized metabolites as versatile tools in shaping plant–microbe associations	37
Steroidal scaffold decorations in Solanum alkaloid biosynthesis	37
Protein phase separation of plant nuclear pore complex	36
NAC1 goes TOPLESS to manage cortex proliferation	35
Breaking the spatial restriction of pluripotency acquisition by environmental stimuli	35
Botanical timekeepers: Deciphering evolutionary relationships in plants	35
From the T2T cotton genome to a tripartite regulatory module governing embryo folding	34
Insects manipulate plant immunity via a cross-kingdom small RNA effector	34
WD40-protein-mediated crosstalk among three epigenetic marks regulates chromatin states and yield in rice	34
The winners of Rising Stars in Plant Sciences 2024	34
Multifaceted roles of phosphorylation-mediated regulation of heterotrimeric G proteins in plant cellular signaling	34
GEFormer: A genotype-environment interaction-based genomic prediction method that integrates the gating multilayer perceptron and linear attention mechanisms	33
Heat stress-induced decapping of WUSCHEL mRNA enhances stem cell thermotolerance in Arabidopsis	33
Telomere-to-telomere genome assembly reveals the genomic architecture of disease resistance and yield coordination in elite wheat YM33	33
A molecular framework underlying low-nitrogen-induced early leaf senescence in Arabidopsis thaliana	33
Underwater survival: Calcium signaling keeps plants afloat	33
Rewilding staple crops for the lost halophytism: Toward sustainability and profitability of agricultural production systems	33
A telomere-to-telomere genome assembly of the cultivated peanut	32
Genome sequences of five Sitopsis species of Aegilops and the origin of polyploid wheat B subgenome	32
The RALF1-FERONIA complex interacts with and activates TOR signaling in response to low nutrients	32
Control of H2S synthesis by the monomer–oligomer transition of OsCBSX3 for modulating rice growth-immunity balance	32
Nitrogen–iron interaction as an emerging factor influencing crop productivity and nutrient use efficiency	32
The tug-of-war between growth and cold tolerance in plants: How to create resilient crops with maintained biomass	32
The BCM1-EGY1 module balances chlorophyll biosynthesis and breakdown to confer chlorophyll homeostasis in land plants	32
Unraveling the sorghum domestication	31
Lack of ethylene does not affect reproductive success and synergid cell death in Arabidopsis	31
A step forward in breeding for ratooning ability in rice	31
Perenniality: From model plants to applications in agriculture	31
Toward the next step to the New Green Revolution	31
Distinctive and complementary roles of E2F transcription factors during plant replication stress responses	31
Regulation of jasmonate signaling by reversible acetylation of TOPLESS in Arabidopsis	31
A war on the cell wall	31
RIN enhances plant disease resistance via root exudate-mediated assembly of disease-suppressive rhizosphere microbiota	30
Epigenetic reprogramming by glucose-TOR signaling controls plant development	30
The ferroxidases LPR1 and LPR2 control iron translocation in the xylem of Arabidopsis plants	30
Arabidopsis WRKY1 promotes monocarpic senescence by integrative regulation of flowering, leaf senescence, and nitrogen remobilization	30
Dampened nuclear localization of SnRK1 by brassinosteroid signaling inhibits stomatal development in Arabidopsis	30
Petota (potatoes) evolved from fortuitous hybridization between Tomato and Etuberosum ancestors	30
Chloroplast state transitions modulate nuclear genome stability via cytokinin signaling in Arabidopsis	30
Mobilizing Triticeae diversity from gene banks to farmer’s field	30
Polycomb and trithorax: Their yin-yang dynamics in plants	29
SUMOylation-modified Pelota-Hbs1 RNA surveillance complex restricts the infection of potyvirids in plants	29
Comparative genomic and transcriptomic analyses uncover the molecular basis of high nitrogen-use efficiency in the wheat cultivar Kenong 9204	29
Methylesterification of cell-wall pectin controls the diurnal flower-opening times in rice	29
A complete reference genome assembly for foxtail millet and Setaria-db, a comprehensive database for Setaria	29
The RLI1–OsPUB77–OsBZR3 module mediates the crosstalk between phosphate starvation and brassinosteroid signaling pathways to shape rice shoot architecture	29
Cell-type-specific transcriptomics reveals that root hairs and endodermal barriers play important roles in beneficial plant-rhizobacterium interactions	29
A SPX domain vacuolar transporter links phosphate sensing to homeostasis in Arabidopsis	29
Cytokinin signaling connects the chloroplast function with nuclear genome stability	29
SoyOmics: A deeply integrated database on soybean multi-omics	29
Exploring the maize transcriptional regulatory landscape through large-scale profiling of transcription factor binding sites	29