Microbial Biotechnology

Article	Citations
Co‐occurrence of antibiotic, biocide, and heavy metal resistance genes in bacteria from metal and radionuclide contaminated soils at the Savannah River Site	88
Different lactic acid bacteria and their combinations regulated the fermentation process of ensiled alfalfa: ensiling characteristics, dynamics of bacterial community and their functional shifts	87
The bacterial community and metabolome dynamics and their interactions modulate fermentation process of whole crop corn silage prepared with or without inoculants	76
Clinical evidence that the pandemic from 1889 to 1891 commonly called the Russian flu might have been an earlier coronavirus pandemic	68
Synthetic community with six Pseudomonas strains screened from garlic rhizosphere microbiome promotes plant growth	66
Rhamnolipids produced by Pseudomonas: from molecular genetics to the market	62
Microbial biosurfactant research: time to improve the rigour in the reporting of synthesis, functional characterization and process development	62
Realities and hopes in the application of microbial tools in agriculture	60
Antibiofilm and antifungal activities of medium‐chain fatty acids against Candida albicans via mimicking of the quorum‐sensing molecule farnesol	58
Fermentation of plant‐based dairy alternatives by lactic acid bacteria	55
Water‐soluble polymers in agriculture: xanthan gum as eco‐friendly alternative to synthetics	55
The soil crisis: the need to treat as a global health problem and the pivotal role of microbes in prophylaxis and therapy	53
Nothing lasts forever: understanding microbial biodegradation of polyfluorinated compounds and perfluorinated alkyl substances	53
Pediococcus pentosaceus LI05 alleviates DSS‐induced colitis by modulating immunological profiles, the gut microbiota and short‐chain fatty acid levels in a mouse model	52
Modulation of gut mucosal microbiota as a mechanism of probiotics‐based adjunctive therapy for ulcerative colitis	48
Phage biocontrol to combat Pseudomonas syringae pathogens causing disease in cherry	48
Effects of growth‐promoting rhizobacteria on maize growth and rhizosphere microbial community under conservation tillage in Northeast China	48
Characteristics and nutrient function of intestinal bacterial communities in black soldier fly (Hermetia illucens L.) larvae in livestock manure conversion	46
Efficient genome editing in filamentous fungi via an improved CRISPR‐Cas9 ribonucleoprotein method facilitated by chemical reagents	46
COVID‐19: Omicron – the latest, the least virulent, but probably not the last variant of concern of SARS‐CoV‐2	41
Multi‐modular engineering of Saccharomyces cerevisiae for high‐titre production of tyrosol and salidroside	40
Lipoteichoic acid from Bifidobacterium animalis subsp. lactis BPL1: a novel postbiotic that reduces fat deposition via IGF‐1 pathway	40
Genome analysis of the metabolically versatile Pseudomonas umsongensis GO16: the genetic basis for PET monomer upcycling into polyhydroxyalkanoates	39
Microbial enzymes will offer limited solutions to the global plastic pollution crisis	39
Catching a glimpse of the bacterial gut community of companion animals: a canine and feline perspective	39

Evaluation of the IR Biotyper for Klebsiella pneumoniae typing and its potentials in hospital hygiene management	39
Can a combination of vaccination and face mask wearing contain the COVID‐19 pandemic?	38
The endolysin of the Acinetobacter baumannii phage vB_AbaP_D2 shows broad antibacterial activity	38
Repurposing phytochemicals as anti‐virulent agents to attenuate quorum sensing‐regulated virulence factors and biofilm formation in Pseudomonas aeruginosa	37
Secondary metabolites from plant‐associated Pseudomonas are overproduced in biofilm	36
Harnessing microbial volatiles to replace pesticides and fertilizers	35
The novel insecticides flupyradifurone and sulfoxaflor do not act synergistically with viral pathogens in reducing honey bee (Apis mellifera) survival but sulfoxaflor modulates host immunocompe	35
Probiotic Lactobacillus casei Shirota prevents acute liver injury by reshaping the gut microbiota to alleviate excessive inflammation and metabolic disorders	34
Exogenous maltose enhances Zebrafish immunity to levofloxacin‐resistant Vibrio alginolyticus	34
Holistic assessment of the microbiome dynamics in the substrates used for commercial champignon (Agaricus bisporus) cultivation	33
High‐efficiency production of bisabolene from waste cooking oil by metabolically engineered Yarrowia lipolytica	32
Loop‐mediated isothermal amplification for the detection of SARS‐CoV‐2 in saliva	32
Inhibition of polymicrobial biofilm formation by saw palmetto oil, lauric acid and myristic acid	32
An updated overview on the regulatory circuits of polyhydroxyalkanoates synthesis	32
Cepharanthine ameliorates dextran sulphate sodium‐induced colitis through modulating gut microbiota	31
Biocorrosion caused by microbial biofilms is ubiquitous around us	31
Scientific novelty beyond the experiment	31
Development of a free radical scavenging bacterial consortium to mitigate oxidative stress in cnidarians	30
Enhancing astaxanthin accumulation in Xanthophyllomyces dendrorhous by a phytohormone: metabolomic and gene expression profiles	30
COVID 19: challenges for virologists in the food industry	29
Microbial interaction with and tolerance of radionuclides: underlying mechanisms and biotechnological applications	28
Gut microbiota composition before infection determines the Salmonella super‐ and low‐shedder phenotypes in chicken	28
Electron availability in CO2, CO and H2 mixtures constrains flux distribution, energy management and product formation in Clostridium ljungdahlii	28
Endophytes isolated from Panax notoginseng converted ginsenosides	28
Correlation of extracellular polymeric substances and microbial community structure in denitrification biofilm exposed to adverse conditions	28
Geographic pattern of antibiotic resistance genes in the metagenomes of the giant panda	27
The differences and overlaps in the seed‐resident microbiome of four Leguminous and three Gramineous forages	27
Addressing the energy crisis: using microbes to make biofuels	26
Environment and host species identity shape gut microbiota diversity in sympatric herbivorous mammals	26
Lactic acid bacteria as probiotics for the nose?	26
Shifts in the rhizobiome during consecutive in planta enrichment for phosphate‐solubilizing bacteria differentially affect maize P status	26
Visualizing the invisible: class excursions to ignite children’s enthusiasm for microbes	26
The seaweed holobiont: from microecology to biotechnological applications	26
SEVA 3.1: enabling interoperability of DNA assembly among the SEVA, BioBricks and Type IIS restriction enzyme standards	26
Butyrate production in the acetogen Eubacterium limosum is dependent on the carbon and energy source	26
Microfluidic devices for studying bacterial taxis, drug testing and biofilm formation	26
Biomolecular composition of capping layer and stability of biogenic selenium nanoparticles synthesized by five bacterial species	25
Characteristic gut microbiota and metabolic changes in patients with pulmonary tuberculosis	25
Truth in wine yeast	25
Isolation of alkaliphilic calcifying bacteria and their feasibility for enhanced CaCO3 precipitation in bio‐based cementitious composites	25
Proteomic characterization of extracellular vesicles produced by several wine yeast species	24
Membrane disruption of Fusarium oxysporum f. sp. niveum induced by myriocin from Bacillus amyloliquefaciens LZN01	24
Characterization of JEN family carboxylate transporters from the acid‐tolerant yeast Pichia kudriavzevii and their applications in succinic acid production	24
Bacillus subtilis and Enterococcus faecium co‐fermented feed regulates lactating sow's performance, immune status and gut microbiota	24
Engineering microbial technologies for environmental sustainability: choices to make	24
Unrevealed roles of polyphosphate‐accumulating microorganisms	24
Elevated intracellular cyclic‐di‐GMP level in Shewanella oneidensis increases expression of c‐type cytochromes	24
Plant growth‐promoting rhizobacteria isolation from rhizosphere of submerged macrophytes and their growth‐promoting effect on Vallisneria natans under high sediment organic matter load	24
Enhanced bioproduction of anticancer precursor vindoline by yeast cell factories	24
Bacterial metabolosomes: new insights into their structure and bioengineering	24

Monitoring COVID‐19 through SARS‐CoV‐2 quantification in wastewater: progress, challenges and prospects	23
Metabolic engineering of Escherichia coli for biosynthesis of β‐nicotinamide mononucleotide from nicotinamide	23
Microbial food: microorganisms repurposed for our food	23
Caecal microbiota could effectively increase chicken growth performance by regulating fat metabolism	23
Faecal microbiota transplantation‐mediated jejunal microbiota changes halt high‐fat diet‐induced obesity in mice via retarding intestinal fat absorption	23
Washed preparation of faecal microbiota changes the transplantation related safety, quantitative method and delivery	23
Antimicrobial resistance: progress and challenges in antibiotic discovery and anti‐infective therapy	22
Dictyostelium discoideum as a non‐mammalian biomedical model	22
Legume–rhizobium dance: an agricultural tool that could be improved?	22
The end of hunger: fertilizers, microbes and plant productivity	22
Minicell‐based fungal RNAi delivery for sustainable crop protection	22
Detection of buried explosives with immobilized bacterial bioreporters	22
Synergistic effect of hypocrellin B and curcumin on photodynamic inactivation of Staphylococcus aureus	22
Assessing the potential for up‐cycling recovered resources from anaerobic digestion through microbial protein production	21
High‐throughput molecular analyses of microbiomes as a tool to monitor the wellbeing of aquatic environments	21
Sulfane sulfur‐activated actinorhodin production and sporulation is maintained by a natural gene circuit in Streptomyces coelicolor	21
Flexible integrated sensing platform for monitoring wound temperature and predicting infection	21
Soil microbiota influences clubroot disease by modulating Plasmodiophora brassicae and Brassica napus transcriptomes	21
Structural analysis and biochemical properties of laccase enzymes from two Pediococcus species	21
Metabolic engineering strategies of de novo pathway for enhancing 2′‐fucosyllactose synthesis in Escherichia coli	21
Biotransformation of d‐xylose to d‐xylonate coupled to medium‐chain‐length polyhydroxyalkanoate production in cellobiose‐grown Pseudomonas putida EM42	21
Development and application of an efficient recombineering system for Burkholderia glumae and Burkholderia plantarii	20
Mining for novel antibiotics in the age of antimicrobial resistance	20
Enhancing fluxes through the mevalonate pathway in Saccharomyces cerevisiae by engineering the HMGR and β‐alanine metabolism	20
Fish growth enhances microbial sulfur cycling in aquaculture pond sediments	20
Integrating continuous hypermutation with high‐throughput screening for optimization of cis,cis‐muconic acid production in yeast	20
Biochemical analysis of cross‐feeding behaviour between two common gut commensals when cultivated on plant‐derived arabinogalactan	20
Revealing formate production from carbon monoxide in wild type and mutants of Rnf‐ and Ech‐containing acetogens, Acetobacterium woodii and Thermoanaerobacter kivui	20
Water is a preservative of microbes	20
Protective effect of Lactobacillus salivarius Li01 on thioacetamide‐induced acute liver injury and hyperammonaemia	20
Current approaches on the roles of lactic acid bacteria in crop silage	19
Convergent phenotypic evolution towards fosfomycin collateral sensitivity of Pseudomonas aeruginosa antibiotic‐resistant mutants	19
An eDNA/eRNA‐based approach to investigate the life cycle of non‐cultivable shellfish micro‐parasites: the case of Bonamia ostreae, a parasite of the European flat oyster Ostrea edulis	19
Strain diversity of plant‐associated Lactiplantibacillus plantarum	19
Identification of genome integration sites for developing a CRISPR‐based gene expression toolkit in Yarrowia lipolytica	19
Living electronics: A catalogue of engineered living electronic components	19
Characteristics of gut microbiota in pigs with different breeds, growth periods and genders	19
Revisiting the host adhesion determinants of Streptococcus thermophilus siphophages	19
Airborne bacterial emission fluxes from manure‐fertilized agricultural soil	18
Yarrowia lipolyticachassis strains engineered to produce aromatic amino acids via the shikimate pathway	18
What we can learn from the dynamics of the 1889 ‘Russian flu’ pandemic for the future trajectory of COVID‐19	18
Extracellular vesicle formation in Lactococcus lactis is stimulated by prophage‐encoded holin–lysin system	18
Repositioning microbial biotechnology against COVID‐19: the case of microbial production of flavonoids	18
Interdependence between lignocellulosic biomasses, enzymatic hydrolysis and yeast cell factories in biorefineries	18
Natural sciences at the service of art and cultural heritage: an interdisciplinary area in development and important challenges	18
Screening of a genome‐reduced Corynebacterium glutamicum strain library for improved heterologous cutinase secretion	17
Effect of concentration and hydraulic reaction time on the removal of pharmaceutical compounds in a membrane bioreactor inoculated with activated sludge	17
COVID‐19: emergence and mutational diversification of SARS‐CoV‐2	17
Association between algal productivity and phycosphere composition in an outdoor Chlorella sorokiniana reactor based on multiple longitudinal analyses	17
Toxoplasma gondii α‐amylase deletion mutant is a promising vaccine against acute and chronic toxoplasmosis	17
Engineering controllable biofilms for biotechnological applications	17
Plasma‐mediated enhancement of enzyme secretion in Aspergillus oryzae	17
Metabolic engineering of Saccharomyces cerevisiae for hydroxytyrosol overproduction directly from glucose	17
We and herbivores eat endophytes	17
Alterations in the gut microbiome and metabolic profile in rats acclimated to high environmental temperature	16
Status quo of tet regulation in bacteria	16
First description of betalains biosynthesis in an aquatic organism: characterization of 4,5‐DOPA‐extradiol‐dioxygenase activity in the cyanobacteria Anabaena cylindrica	16
Carbon catabolite regulation of secondary metabolite formation, an old but not well‐established regulatory system	16
Enzyme‐constrained models predict the dynamics of Saccharomyces cerevisiae growth in continuous, batch and fed‐batch bioreactors	16
Defining how microorganisms benefit human health	16
Metabolic engineering of Vibrio natriegens for anaerobic succinate production	16
Phytoplankton trigger the production of cryptic metabolites in the marine actinobacterium Salinispora tropica	16
Safety and immunogenicity of a new glycoengineered vaccine against Acinetobacter baumannii in mice	16
Safety of photosynthetic Synechococcus elongatus for in vivo cyanobacteria–mammalian symbiotic therapeutics	16
The Brassica napus seed microbiota is cultivar‐specific and transmitted via paternal breeding lines	16
Benchmarking recombinant Pichiapastoris for 3‐hydroxypropionic acid production from glycerol	16
The gut microbiota, a key to understanding the health implications of micro(nano)plastics and their biodegradation	16
The role of the Listeria monocytogenes surfactome in biofilm formation	16
The potential of bacteriophages to control Xanthomonas campestris pv. campestris at different stages of disease development	15
Structure–activity relationships of antibacterial peptides	15
Comparative secretome of white‐rot fungi reveals co‐regulated carbohydrate‐active enzymes associated with selective ligninolysis of ramie stalks	15
Biosynthesis of cofactor‐activatable iron‐only nitrogenase in Saccharomyces cerevisiae	15
Role of phenazine‐enzyme physiology for current generation in a bioelectrochemical system	15
Engineering a probiotic strain of Escherichia coli to induce the regression of colorectal cancer through production of 5‐aminolevulinic acid	15
Sanguinarine synergistically potentiates aminoglycoside‐mediated bacterial killing	15
COVID‐19: vaccine’s progress	15
Armeniaspirol A: a novel anti‐Helicobacter pylori agent	15
On the future fermentation	15
An underappreciated DIET for anaerobic petroleum hydrocarbon‐degrading microbial communities	15
Protein‐based natural antibacterial materials and their applications in food preservation	15

SEVAtile: a standardised DNA assembly method optimised for Pseudomonas	15
Antifungal activity of hypocrellin compounds and their synergistic effects with antimicrobial agents against Candida albicans	15
Bacteriophage‐mediated interference of the c‐di‐GMP signalling pathway in Pseudomonas aeruginosa	14
Comprehensively dissecting the hub regulation of PkaC on high‐productivity and pellet macromorphology in citric acid producing Aspergillus niger	14
Biological and technical challenges for implementation of yeast‐based biosensors	14
Synthetic co‐culture of autotrophic Clostridium carboxidivorans and chain elongating Clostridium kluyveri monitored by flow cytometry	14
The urgent need for microbiology literacy in society: children as educators	14
Different co‐occurring bacteria enhance or decrease the growth of the microalga Nannochloropsis sp. CCAP211/78	14
Diverse responses of pqqC‐ and phoD‐harbouring bacterial communities to variation in soil properties of Moso bamboo forests	14
Efficient CRISPR/Cas9 system based on autonomously replicating plasmid with an AMA1 sequence and precisely targeted gene deletion in the edible fungus, Cordyceps militaris	14
Sporulation is dispensable for the vegetable‐associated life cycle of the human pathogen Bacillus cereus	14
MiMiC: a bioinformatic approach for generation of synthetic communities from metagenomes	14
Continuous feeding strategy for polyhydroxyalkanoate production from solid waste animal fat at laboratory‐ and pilot‐scale	14
Weaponising microbes for peace	14
Genomic insights on fighting bacterial wilt by a novel Bacillus amyloliquefaciens strain Cas02	14
Newly identified genes contribute to vanillin tolerance in Saccharomyces cerevisiae	14
Rapid preparation and antimicrobial activity of polyurea coatings with RE‐Doped nano‐ZnO	14
Auxin‐mediated induction of GAL promoters by conditional degradation of Mig1p improves sesquiterpene production in Saccharomyces cerevisiae with engineered acetyl‐CoA synthesis	14
Enhancement of microbiome management by machine learning for biological wastewater treatment	13
Use of CRISPR‐Cas tools to engineer Trichoderma species	13
High‐throughput dilution‐based growth method enables time‐resolved exo‐metabolomics of Pseudomonas putida and Pseudomonas aeruginosa	13
Sustainable biosynthesis of chemicals from methane and glycerol via reconstruction of multi‐carbon utilizing pathway in obligate methanotrophic bacteria	13
A newly developed PCR‐based method revealed distinct Fusobacterium nucleatum subspecies infection patterns in colorectal cancer	13
Physiological activity of E. coli engineered to produce butyric acid	13
Metabolic energy conservation for fermentative product formation	13
Mechanistic and phylogenetic insights into actinobacteria‐mediated oestrogen biodegradation in urban estuarine sediments	13
Next steps after 15 stimulating years of human gut microbiome research	13
Oil field microorganisms cause highly localized corrosion on chemically inhibited carbon steel	13
Integrating greenhouse gas capture and C1 biotechnology: a key challenge for circular economy	13
Antibiofilm and repair activity of ozonated oil in liposome	13
Extremophilic microbial communities on photovoltaic panel surfaces: a two‐year study	13
Developing an understanding of sophorolipid synthesis through application of a central composite design model	13
When microbial biotechnology meets material engineering	12
The beginning and ending of a respiratory viral pandemic‐lessons from the Spanish flu	12
Microbial production of small peptide: pathway engineering and synthetic biology	12
Programming living sensors for environment, health and biomanufacturing	12
The membrane mucin Msb2 regulates aflatoxin biosynthesis and pathogenicity in fungus Aspergillus flavus	12
One major facilitator superfamily transporter is responsible for propionic acid tolerance in Pseudomonas putida KT2440	12
Network analysis and functional estimation of the microbiome reveal the effects of cashew nut shell liquid feeding on methanogen behaviour in the rumen	12
Multi‐level metabolic engineering of Escherichia coli for high‐titer biosynthesis of 2′‐fucosyllactose and 3‐fucosyllactose	12
Diallyl sulfide from garlic suppresses quorum‐sensing systems of Pseudomonas aeruginosa and enhances biosynthesis of three B vitamins through its thioether group	12
In vivo, in vitro and in silico: an open space for the development of microbe‐based applications of synthetic biology	12
Establishment of a Cuscuta campestris‐mediated enrichment system for genomic and transcriptomic analyses of ‘Candidatus Liberibacter asiaticus’	12
Engineering Saccharomyces cerevisiae‐based biosensors for copper detection	12
High methanol‐to‐formate ratios induce butanol production in Eubacterium limosum	12
Additive effects of metal excess and superoxide, a highly toxic mixture in bacteria	12
Transcriptome dynamics and metabolite analysis revealed the candidate genes and regulatory mechanism of ganoderic acid biosynthesis during liquid superficial‐static culture of Ganoderma lucidum	12
Metabolic engineering of Pseudomonas putida for production of vanillylamine from lignin‐derived substrates	12
Development of a live biotherapeutic throat spray with lactobacilli targeting respiratory viral infections	12
Production of 11α‐hydroxysteroids from sterols in a single fermentation step by Mycolicibacterium smegmatis	12
Enhancing electrical outputs of the fuel cells with Geobacter sulferreducens by overexpressing nanowire proteins	11
Improved production of 2,3‐butanediol and isobutanol by engineering electron transport chain in Escherichia coli	11
The rising dominance of microbiology: what to expect in the next 15 years?	11
Nutrient conditions determine the localization of Bacillus thuringiensis Vip3Aa protein in the mother cell compartment	11
The development of human gut microbiota fermentation capacity during the first year of life	11
Green and scalable synthesis of chiral aromatic alcohols through an efficient biocatalytic system	11
Revisiting a ‘simple’ fungal metabolic pathway reveals redundancy, complexity and diversity	11
Electroacupuncture modulates the intestinal microecology to improve intestinal motility in spinal cord injury rats	11
Cecal microbial transplantation attenuates hyperthyroid‐induced thermogenesis in Mongolian gerbils	11
The darkest microbiome—a post‐human biosphere	11
Accessing previously uncultured marine microbial resources by a combination of alternative cultivation methods	11
Are synthetic biology standards applicable in everyday research practice?	10
Increasing the copper sensitivity of microorganisms by restricting iron supply, a strategy for bio‐management practices	10
Lignocellulose conversion of ensiled Caragana korshinskii Kom. facilitated by Pediococcus acidilactici and cellulases	10
Using the microbiome in clinical practice	10
A plasmid toolset for CRISPR‐mediated genome editing and CRISPRi gene regulation in Escherichia coli	10
mRNA vaccines against COVID‐19: a showcase for the importance of microbial biotechnology	10
Redox‐sensitive transcriptional regulator SoxR directly controls antibiotic production, development and thiol‐oxidative stress response in Streptomyces avermitilis	10
Hyperproduction of PHA copolymers containing high fractions of 4‐hydroxybutyrate (4HB) by outer membrane‐defected Halomonas bluephagenesis grown in bioreactors	10
Selective fungal bioprecipitation of cobalt and nickel for multiple‐product metal recovery	10
Modes‐of‐action of antifungal compounds: Stressors and (target‐site‐specific) toxins, toxicants, or toxin–stressors	10
Rapid production of l‐DOPA by Vibrio natriegens, an emerging next‐generation whole‐cell catalysis chassis	10
Anti‐obesity effects of Chenpi: an artificial gastrointestinal system study	10
Effect on the ensilage performance and microbial community of adding Neolamarckia cadamba leaves to corn stalks	10
Current progress on engineering microbial strains and consortia for production of cellulosic butanol through consolidated bioprocessing	10
Potential of laser‐induced fluorescence‐light detection and ranging for future stand‐off virus surveillance	10
Hermetia illucens L. larvae–associated intestinal microbes reduce the transmission risk of zoonotic pathogens in pig manure	10
Development of dual‐inducible duet‐expression vectors for tunable gene expression control and CRISPR interference‐based gene repression in Pseudomonas putida KT2440	10
Identification of antibiotic resistance and virulence‐encoding factors in Klebsiella pneumoniae by Raman spectroscopy and deep learning	10
A multiplex antigen microarray for simultaneous IgG and IgM detection against SARS‐CoV‐2 reveals higher seroprevalence than reported	10
Anthropogenic chemicals and their impacts on microbes living in buildings	10