Evolutionary Applications

Article	Citations
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Comparison of bacterial suppression by phage cocktails, dual‐receptor generalists, and coevolutionarily trained phages	44
Genomic and environmental influences on resilience in a cold‐water fish near the edge of its range	38
Identifying and testing marker–trait associations for growth and phenology in three pine species: Implications for genomic prediction	37
Reciprocal Host–Wolbachia Interactions Shape Infection Persistence Upon Loss of Cytoplasmic Incompatibility in Haplodiploids	36
Cryptic diversity and spatial genetic variation in the coral Acropora tenuis and its endosymbionts across the Great Barrier Reef	33
Reliability of trans‐generational genetic mark–recapture (tGMR) for enumerating Pacific salmon	32
Genetic Stock Identification Reveals Mismatches Between Management Areas and Population Genetic Structure in a Migratory Pelagic Fish	31
Structural genomic variation in the inbred Scandinavian wolf population contributes to the realized genetic load but is positively affected by immigration	31
Linked Selection and Gene Density Shape Genome‐Wide Patterns of Diversification in Peatmosses	29
Factors Beyond Karstification Have Shaped the Population Structure of a Surface‐Dwelling Minnow (Phoxinus lumaireul) Able to Disperse Underground	29
Genomic Evidence for the Purging of Deleterious Genetic Variation in the Endangered North Atlantic Right Whale	28
Genetic Signatures of Contrasted Outbreak Histories of “Candidatus Liberibacter asiaticus”, the Bacterium That Causes Citrus Huanglongbing, in Three Outermost Regions of the European Union	27
Genetic and Habitat Rescue Improve Population Viability in Self‐Incompatible Plants	26
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Genomic insights into local adaptation in the Asiatic toad Bufo gargarizans, and its genomic offset to climate warming	25
Cancer suppression and the evolution of multiple retrogene copies of TP53 in elephants: A re‐evaluation	25
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Characterization of novel lncRNA muscle expression profiles associated with meat quality in beef cattle	24
Rich resource environment of fish farms facilitates phenotypic variation and virulence in an opportunistic fish pathogen	24
Low genetic diversity, local‐scale structure, and distinct genetic integrity of Korean chum salmon (Oncorhynchus keta) at the species range margin suggest a priority for conservation efforts	24
Climatic oscillation promoted diversification of spinous assassin bugs during Pleistocene glaciation	24
The effect of metal remediation on the virulence and antimicrobial resistance of the opportunistic pathogen Pseudomonas aeruginosa	24

Population genomics of the basket cockle Clinocardium nuttallii in the southern Salish Sea: Assessing genetic risks of stock enhancement for a culturally important marine bivalve	23
Dispersal and Gene Flow Among Potential Spawners: Source–Sink Structure Among Populations of Anadromous Brown Trout Exposed to Multifaceted Anthropogenic Impacts	22
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Evolutionary View of Liver Pathology	22
Plasticity to ocean warming is influenced by transgenerational, reproductive, and developmental exposure in a coral reef fish	22
Conservation and the genomics of populations, 3rd edition, Allendorf F. W., Funk W. C., Aitken S. N., Byrne M., Luikart G.	21
Signatures of selection in Mulinia lateralis underpinning its rapid adaptation to laboratory conditions	21
Early queen joining and long‐term queen associations in polygyne colonies of an invasive wasp revealed by longitudinal genetic analysis	21
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An evolutionary perspective on increasing net benefits to crops from symbiotic microbes	20
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Transgenerational effects on body size and survival in Brook charr (Salvelinus fontinalis)	20
Hybridization and range expansion in tamarisk beetles (Diorhabda spp.) introduced to North America for classical biological control	20
Genotype–environment associations across spatial scales reveal the importance of putative adaptive genetic variation in divergence	20
More evolvable bacteriophages better suppress their host	19
Independently evolved pollution resistance in four killifish populations is largely explained by few variants of large effect	19
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The influence of genetic architecture on responses to selection under drought in rice	19
Lineage Differentiation and Genomic Vulnerability in a Relict Tree From Subtropical Forests	19
Linking Measures of Inbreeding and Genetic Load to Demographic Histories Across Three Species of Bears	19
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Maintaining Local Adaptation Is Key for Evolutionary Rescue and Long‐Term Persistence of Populations Experiencing Habitat Loss and a Changing Environment	18
Evidence of Fine‐Scale Genetic Structure in Tiger Sharks (Galeocerdo cuvier) Highlights the Importance of Stratified Sampling Regimes	17
Local environments, not invasive hybridization, influence cardiac performance of native trout under acute thermal stress	17
Contrasting effect of hybridization on genetic differentiation in three rockfish species with similar life history	17
Genome of Kumamoto Oyster Crassostrea sikamea Provides Insights Into Bivalve Evolution and Environmental Adaptation	17
A cryptic syngameon withinBetulashrubs revealed: Implications for conservation in changing subarctic environments	17
Genetic variation associated with adult migration timing in lineages of Steelhead and Chinook Salmon in the Columbia River	16
Competitive interactions affect introgression and population viability amidst maladaptive hybridization	16
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Population origin determines the adaptive potential for the advancement of flowering onset in Lupinus angustifolius L. (Fabaceae)	16
Population and seascape genomics of a critically endangered benthic elasmobranch, the blue skate Dipturus batis	16
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Between the Cape Fold Mountains and the deep blue sea: Comparative phylogeography of selected codistributed ectotherms reveals asynchronous cladogenesis	15
Biological control needs evolutionary perspectives of ecological interactions	15
Effective population size in a partially clonal plant is not predicted by the number of genetic individuals	15
The Influence of Spatial Distance and Environment on Small‐Scale Genetic Variability in Eelgrass and Its Application for Restoration	15
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Large‐scale mitogenome sequencing reveals consecutive expansions of domestic taurine cattle and supports sporadic aurochs introgression	15
Fine‐scale environmentally associated spatial structure of lumpfish (Cyclopterus lumpus) across the Northwest Atlantic	15
Impact of putatively beneficial genomic loci on gene expression in little brown bats (Myotis lucifugus, Le Conte, 1831) affected by white‐nose syndrome	15
Genome‐wide SNPs of vegetable leafminer, Liriomyza sativae: Insights into the recent Australian invasion	15
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Range‐wide population genomics of the spongy moth, Lymantria dispar (Erebidae): Implications for biosurveillance, subspecies classification and phylogeography of a destructive moth	15
The effect of parental age on the quantity and quality of offspring in Syngnathus typhle, a species with male pregnancy	15
Utility and challenges of using whole‐genome resequencing to detect emerging insect and mite resistance in agroecosystems	14
Assessing genotype–environment interactions in Atlantic salmon reared in freshwater loch and recirculating systems	14
Comparative Transcriptomic Reveals Greater Similarities in Response to Temperature Than to Invasive Alien Predator in the Damselfly Ischnura elegans Across Different Geographic Scales	14
Ecology of Gene Drives: The Role of Density‐Dependent Feedbacks on the Efficacy and Dynamics of Two‐Locus Underdominance Gene Drive Systems	14

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Comparing Genetic Ne Reconstructions Over Time With Long‐Time Wolf Monitoring Data in Two Populations	14
Genomic prediction based on preselected single‐nucleotide polymorphisms from genome‐wide association study and imputed whole‐genome sequence data annotation for growth traits in Duroc pigs	14
Fine‐scale population structure of the northern hard clam (Mercenaria mercenaria) revealed by genome‐wide SNP markers	14
A cytochrome P450 insecticide detoxification mechanism is not conserved across the Megachilidae family of bees	14
Breeding for adaptation to climate change: genomic selection for drought response in a white spruce multi‐site polycross test	14
Genetic structure and first genome‐wide insights into the adaptation of a wild relative of grapevine, Vitis berlandieri	14
Temporal and region‐specific variations in genome‐wide inbreeding effects on female size and reproduction traits of rainbow trout	13
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A Trade‐Off Between Antimicrobial Peptide Resistance and Sensitivity to Host Immune Effectors in Staphylococcus aureus In Vivo	13
Population genetic insights into establishment, adaptation, and dispersal of the invasive quagga mussel across perialpine lakes	13
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A decade of progress in marine evolutionary biology	13
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Carry‐over effects and fitness trade‐offs in marine life histories: The costs of complexity for adaptation	13
Genetic guidelines for translocations: Maintaining intraspecific diversity in the lion (Panthera leo)	13
Different mechanisms underpin the decline in growth of anchovies and sardines of the Bay of Biscay	12
Unveiling invisible farm‐to‐farmPRRSV‐2 transmission links and routes through transmission tree and network analysis	12
Consistent variations in personality traits and their potential for genetic improvement in biocontrol agents: Trichogramma evanescens as a case study	12
A single generation in the wild increases fitness for descendants of hatchery‐origin Chinook salmon (Oncorhynchus tshawytscha)	12
Genetic consequences of improved river connectivity in brown trout (Salmo trutta L.)	12
Genomic and Physiological Basis of Structural and Foliar Trait Variation in Tropical Species Pterocarpus officinalis: Implications for Restoration in Future Drier Climates	12
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Genetic basis of growth, spring phenology, and susceptibility to biotic stressors in maritime pine	12
Genomics reveal the origins and current structure of a genetically depauperate freshwater species in its introduced Alaskan range	12
Genomic prediction of carcass traits using different haplotype block partitioning methods in beef cattle	12
Domestication‐induced reduction in eye size revealed in multiple common garden experiments: The case of Atlantic salmon (Salmo salar L.)	12
Do Sex Ratio Distorting Microbes Inhibit the Evolution of Pesticide Resistance? An Experimental Test	12
Genetic evidence of a hybrid swarm between Alpine ibex (Capra ibex) and domestic goat (C. hircus)	12
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The evolution of barriers to exploitation: Sometimes the Red Queen can take a break	12
A single genomic region involving a putative chromosome rearrangement in flat oyster (Ostrea edulis) is associated with differential host resilience to the parasite Bonamia ostreae	12
Genomic regions and candidate genes selected during the breeding of rice in Vietnam	12
Genomic selection reveals hidden relatedness and increased breeding efficiency in western redcedar polycross breeding	12
Genomic vulnerability of a freshwater salmonid under climate change	12
Leveraging the genetic diversity of trout in the rivers of the British Isles and northern France to understand the movements of sea trout (Salmo trutta L.) around the English Channel	12
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Evolutionary Genomics Provides Insights Into Endangerment and Conservation of a Wild Apple Tree Species, Malus sieversii	12
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Dynamics of reduced genetic diversity in increasingly fragmented populations of Florida scrub jays,Aphelocoma coerulescens	11
Phylogenetic diversity and conservation of crop wild relatives in Colombia	11
A potential role for restricted intertactical heritability in preventing intralocus conflict	11
Population dynamics linked to glacial cycles inCercis chunianaF. P. Metcalf (Fabaceae) endemic to the montane regions of subtropical China	11
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Meta‐analysis: Congruence of genomic and phenotypic differentiation across diverse natural study systems	11
Genetic rescue from protected areas is modulated by migration, hunting rate, and timing of harvest	11
Landscape Heterogeneity and Environmental Dynamics Improve Predictions of Establishment Success of Colonising Small Founding Populations	11
Evolution of reproductive life‐history and dispersal traits during the range expansion of a biological control agent	11
Species–landscape interactions drive divergent population trajectories in four forest‐dependent Afromontane forest songbird species within a biodiversity hotspot in South Africa	11
Endangered Pinto/Northern Abalone (Haliotis kamtschatkana) are Panmictic Across Their 3700 km Range Along the Pacific Coast of North America	10
Genome‐Wide Diversity in Lowland and Highland Maize Landraces From Southern South America: Population Genetics Insights to Assist Conservation	10
Evolution in Response to Management Increases Invasiveness Among Experimental Populations of Duckweed (Lemna minor)	10
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Population genetic structure of the carrot weevil (Listronotus oregonensis) in North America	10
Meeting Report on the Symposium “Evolutionary Applications” at the 3rd Joint Congress on Evolutionary Biology	10
Effective Population Size Estimation in Large Marine Populations: Considering Current Challenges and Opportunities When Simulating Large Data Sets With High‐Density Genomic Information	10
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Tropical forest loss and geographic location drive the functional genomic diversity of an endangered palm tree	10
Differential expression analyses reveal extensive transcriptional plasticity induced by temperature in New Zealand silver trevally (Pseudocaranx georgianus)	10
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Planting long‐lived trees in a warming climate: Theory shows the importance of stage‐dependent climatic tolerance	9
A diverse parasite pool can improve effectiveness of biological control constrained by genotype‐by‐genotype interactions	9
Spatial and temporal patterns in the population genomics of the European cockchafer Melolontha melolontha in the Alpine region	9
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Multiple Stressors in the Anthropocene: Urban Evolutionary History Modifies Sensitivity to the Toxic Effects of Crude Oil Exposure in Killifish	9
A genomic region associated with iteroparous spawning phenology is linked with age‐at‐maturity in female steelhead trout	9
How large and diverse are field populations of fungal plant pathogens? The case of Zymoseptoria tritici	9
Evidence of hard‐selective sweeps suggests independent adaptation to insecticides in Colorado potato beetle (Coleoptera: Chrysomelidae) populations	9
Selection of sites for field trials of genetically engineered mosquitoes with gene drive	9
Bottleneck‐associated changes in the genomic landscape of genetic diversity in wild lynx populations	9
Assessing the invasive potential of different source populations of ragweed (Ambrosia artemisiifoliaL.) through genomically informed species distribution modelling	9
The many dimensions of combination therapy: How to combine antibiotics to limit resistance evolution	9
Dealing With Assumptions and Sampling Bias in the Estimation of Effective Population Size: A Case Study in an Amphibian Population	9
Gene flow between island populations of the malaria mosquito, Anopheles hinesorum, may have contributed to the spread of divergent host preference phenotypes	9
The cost of host genetic resistance on body condition: Evidence from divergently selected sheep	9

Population demographic history and evolutionary rescue: Influence of a bottleneck event	9
Local Adaptation and Climate Change Vulnerability of the Relict Tree Species Taiwania cryptomerioides Provide Insights Into Its Conservation and Restoration	9
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Evidence of hybridization between genetically distinct Baltic cod stocks during peak population abundance(s)	8
Hidden but revealed: After years of genetic studies behavioural monitoring combined with genomics uncover new insight into the population dynamics of Atlantic cod in Icelandic waters	8
Differential patterns of connectivity in Western Pacific hydrothermal vent metapopulations: A comparison of biophysical and genetic models	8
Niche breadth and divergence in sympatric cryptic coral species (Pocillopora spp.) across habitats within reefs and among algal symbionts	8
Ten years of demographic modelling of divergence and speciation in the sea	8
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Fine‐Scale Variation in Soil Properties Promotes Local Taxonomic Diversity of Hybridizing Oak Species (Quercus spp.)	8
Limited gains in native parasitoid performance on an invasive host beyond three generations of selection	8
Genome‐wide analysis of natural and restored eastern oyster populations reveals local adaptation and positive impacts of planting frequency and broodstock number	8
The tumour is in the detail: Local phylogenetic, population and epidemiological dynamics of a transmissible cancer in Tasmanian devils	8
Weak Local Adaptation to Climate in Seedlings of a Deciduous Conifer Suggests Limited Benefits and Risks of Assisted Gene Flow	8
A lack of genetic diversity and minimal adaptive evolutionary divergence in introduced Mysis shrimp after 50 years	8
SNP discovery and genetic structure in blue mussel species using low coverage sequencing and a medium density 60 K SNP‐array	8
The genetic legacy of the first successful reintroduction of a mammal to Britain: Founder events and attempted genetic rescue in Scotland's beaver population	8
Comparison of Conservation Strategies for California Channel Island Oak (Quercus tomentella) Using Climate Suitability Predicted From Genomic Data	8
Balancing Inbreeding and Outbreeding Risks to Inform Translocations Throughout the Range of an Imperiled Darter	8
Modeling of senescent cell dynamics predicts a late‐life decrease in cancer incidence	8
Host mixtures for plant disease control: Benefits from pathogen selection and immune priming	8
Do biological control agents adapt to local pest genotypes? A multiyear test across geographic scales	8
Going New Places: Successful Adaptation and Genomic Integrity of Grain Amaranth in India	8
Can cryptic female choice prevent invasive hybridization in external fertilizing fish?	8
Population genomics, life‐history tactics, and mixed‐stock subsistence fisheries in the northernmost American Atlantic salmon populations	8
When Do Tumours Develop? Neoplastic Processes Across Different Timescales: Age, Season and Round the Circadian Clock	8