Biotechnology for Biofuels

Article	Citations
Waste biorefinery towards a sustainable circular bioeconomy: a solution to global issues	181
Recent advances in the valorization of plant biomass	130
Depolymerization and conversion of lignin to value-added bioproducts by microbial and enzymatic catalysis	116
Bioprospecting of microbial strains for biofuel production: metabolic engineering, applications, and challenges	106
Recent advances in understanding the effects of lignin structural characteristics on enzymatic hydrolysis	97
Optimization of biogas yield from lignocellulosic materials with different pretreatment methods: a review	85
The current status, challenges and prospects of using biomass energy in Ethiopia	74
Rational engineering of the Trichoderma reesei RUT-C30 strain into an industrially relevant platform for cellulase production	71
Engineering microbial pathways for production of bio-based chemicals from lignocellulosic sugars: current status and perspectives	70
Understanding the effects of different residual lignin fractions in acid-pretreated bamboo residues on its enzymatic digestibility	69
Consolidated bioprocessing of corn cob-derived hemicellulose: engineered industrial Saccharomyces cerevisiae as efficient whole cell biocatalysts	59
Approaches to genetic tool development for rapid domestication of non-model microorganisms	59
Unraveling the roles of the reductant and free copper ions in LPMO kinetics	59
Membranes for bioethanol production by pervaporation	58
Coupling azo dye degradation and biodiesel production by manganese-dependent peroxidase producing oleaginous yeasts isolated from wood-feeding termite gut symbionts	57
An overview to process design, simulation and sustainability evaluation of biodiesel production	57
Overexpression of an endogenous type 2 diacylglycerol acyltransferase in the marine diatom Phaeodactylum tricornutum enhances lipid production and omega-3 long-chain polyunsaturated fatty acid content	52
Towards sustainable production and utilization of plant-biomass-based nanomaterials: a review and analysis of recent developments	51
Identification of the major fermentation inhibitors of recombinant 2G yeasts in diverse lignocellulose hydrolysates	50
Engineering endogenous ABC transporter with improving ATP supply and membrane flexibility enhances the secretion of β-carotene in Saccharomyces cerevisiae	49
Bioproduction of succinic acid from xylose by engineered Yarrowia lipolytica without pH control	48
Removal of fermentation inhibitors from pre-hydrolysis liquor using polystyrene divinylbenzene resin	47
Consolidated bioprocessing of cellulose to itaconic acid by a co-culture of Trichoderma reesei and Ustilago maydis	47
Biomethanation processes: new insights on the effect of a high H2 partial pressure on microbial communities	47
Investigation of carbon and energy metabolic mechanism of mixotrophy in Chromochloris zofingiensis	43

Enhancement of docosahexaenoic acid production by overexpression of ATP-citrate lyase and acetyl-CoA carboxylase in Schizochytrium sp.	43
A novel recyclable furoic acid-assisted pretreatment for sugarcane bagasse biorefinery in co-production of xylooligosaccharides and glucose	42
Microbial lipid production from crude glycerol and hemicellulosic hydrolysate with oleaginous yeasts	42
Enzymatic degradation of maize shoots: monitoring of chemical and physical changes reveals different saccharification behaviors	40
Harnessing microbial wealth for lignocellulose biomass valorization through secretomics: a review	39
High production of triterpenoids in Yarrowia lipolytica through manipulation of lipid components	39
Current and future advances in fluorescence-based visualization of plant cell wall components and cell wall biosynthetic machineries	39
Construction and analysis of an artificial consortium based on the fast-growing cyanobacterium Synechococcus elongatus UTEX 2973 to produce the platform chemical 3-hydroxypropionic acid from CO2	38
Oleaginous yeasts respond differently to carbon sources present in lignocellulose hydrolysate	38
Bacterial alginate metabolism: an important pathway for bioconversion of brown algae	38
Production of the biocommodities butanol and acetone from methanol with fluorescent FAST-tagged proteins using metabolically engineered strains of Eubacterium limosum	37
Metabolic engineering of Yarrowia lipolytica for thermoresistance and enhanced erythritol productivity	35
Enhanced lignin biodegradation by consortium of white rot fungi: microbial synergistic effects and product mapping	35
A new synergistic relationship between xylan-active LPMO and xylobiohydrolase to tackle recalcitrant xylan	35
Acceptability of genetically engineered algae biofuels in Europe: opinions of experts and stakeholders	35
Enhanced xylitol production using non-detoxified xylose rich pre-hydrolysate from sugarcane bagasse by newly isolated Pichia fermentans	34
TAG pathway engineering via GPAT2 concurrently potentiates abiotic stress tolerance and oleaginicity in Phaeodactylum tricornutum	34
Hydrophobic pore space constituted in macroporous ZIF-8 for lipase immobilization greatly improving lipase catalytic performance in biodiesel preparation	33
Production routes to bio-acetic acid: life cycle assessment	33
Metabolic engineering of a fast-growing cyanobacterium Synechococcus elongatus PCC 11801 for photoautotrophic production of succinic acid	33
Further engineering of R. toruloides for the production of terpenes from lignocellulosic biomass	33
Organosolv pretreatment assisted by carbocation scavenger to mitigate surface barrier effect of lignin for improving biomass saccharification and utilization	33
Solid-state NMR of unlabeled plant cell walls: high-resolution structural analysis without isotopic enrichment	32
Studies on sugar transporter CRT1 reveal new characteristics that are critical for cellulase induction in Trichoderma reesei	32
Techno-economic evaluation of microalgae high-density liquid fuel production at 12 international locations	31
The oleaginous astaxanthin-producing alga Chromochloris zofingiensis: potential from production to an emerging model for studying lipid metabolism and carotenogenesis	31
Enhancement of polyhydroxyalkanoate production by co-feeding lignin derivatives with glycerol in Pseudomonas putida KT2440	31
CRISPR-mediated multigene integration enables Shikimate pathway refactoring for enhanced 2-phenylethanol biosynthesis in Kluyveromyces marxianus	31
Engineering Pichia pastoris with surface-display minicellulosomes for carboxymethyl cellulose hydrolysis and ethanol production	31
Disulfide bond engineering of AppA phytase for increased thermostability requires co-expression of protein disulfide isomerase in Pichia pastoris	30
LACCASE14 is required for the deposition of guaiacyl lignin and affects cell wall digestibility in poplar	29
ARTP/EMS-combined multiple mutagenesis efficiently improved production of raw starch-degrading enzymes in Penicillium oxalicum and characterization of the enzyme-hyperproducing mutant	29
Transparent polyvinyl-alcohol cryogel as immobilisation matrix for continuous biohydrogen production by phototrophic bacteria	29
Time‑resolved transcriptome analysis during transitions of sulfur nutritional status provides insight into triacylglycerol (TAG) and astaxanthin accumulation in the green alga Chromochloris zofingiens	29
Integrative transcriptome and proteome analyses provide new insights into different stages of Akebia trifoliata fruit cracking during ripening	28
Biochemical characteristics and molecular mechanism of an exo-type alginate lyase VxAly7D and its use for the preparation of unsaturated monosaccharides	28
Extraction of sugarcane bagasse arabinoxylan, integrated with enzymatic production of xylo-oligosaccharides and separation of cellulose	28
Effects of biofilm transfer and electron mediators transfer on Klebsiella quasipneumoniae sp. 203 electricity generation performance in MFCs	27
Characterization of an AA9 LPMO from Thielavia australiensis, TausLPMO9B, under industrially relevant lignocellulose saccharification conditions	27
Optimisation of microalgal cultivation via nutrient-enhanced strategies: the biorefinery paradigm	27
Magnetic COFs as satisfactory support for lipase immobilization and recovery to effectively achieve the production of biodiesel by maintenance of enzyme activity	27
Single-step ethanol production from raw cassava starch using a combination of raw starch hydrolysis and fermentation, scale-up from 5-L laboratory and 200-L pilot plant to 3000-L industrial fermenters	27
Improvement of thermostability and catalytic efficiency of glucoamylase from Talaromyces leycettanus JCM12802 via site-directed mutagenesis to enhance industrial saccharification applications	27
Low-temperature effects on docosahexaenoic acid biosynthesis in Schizochytrium sp. TIO01 and its proposed underlying mechanism	26
Time-resolved multi-omics analysis reveals the role of nutrient stress-induced resource reallocation for TAG accumulation in oleaginous fungus Mortierella alpina	26
Thermotolerant glycosyl hydrolases-producing Bacillus aerius CMCPS1 and its saccharification efficiency on HCR-laccase (LccH)-pretreated corncob biomass	26
Biomass-degrading glycoside hydrolases of archaeal origin	26
Evaluation of acidogenesis products’ effect on biogas production performed with metagenomics and isotopic approaches	26
Biodiesel production from alternative raw materials using a heterogeneous low ordered biosilicified enzyme as biocatalyst	26
AP2/ERF and R2R3-MYB family transcription factors: potential associations between temperature stress and lipid metabolism in Auxenochlorella protothecoides	25

Extracellular riboflavin induces anaerobic biofilm formation in Shewanella oneidensis	25
Metabolic engineering of phosphite metabolism in Synechococcus elongatus PCC 7942 as an effective measure to control biological contaminants in outdoor raceway ponds	25
Development and characterization of acidic-pH-tolerant mutants of Zymomonas mobilis through adaptation and next-generation sequencing-based genome resequencing and RNA-Seq	25
Efficient lactic acid production from dilute acid-pretreated lignocellulosic biomass by a synthetic consortium of engineered Pseudomonas putida and Bacillus coagulans	25
Transcriptome-based analysis of the effects of salicylic acid and high light on lipid and astaxanthin accumulation in Haematococcus pluvialis	24
Engineering oleaginous yeast Rhodotorula toruloides for overproduction of fatty acid ethyl esters	24
Integration of proteome and transcriptome refines key molecular processes underlying oil production in Nannochloropsis oceanica	24
Deciphering the transcriptional regulatory networks that control size, color, and oil content in Brassica rapa seeds	24
Tailoring renewable materials via plant biotechnology	24
Modification of transcriptional factor ACE3 enhances protein production in Trichoderma reesei in the absence of cellulase gene inducer	24
Quantitative proteomic comparison of salt stress in Chlamydomonas reinhardtii and the snow alga Chlamydomonas nivalis reveals mechanisms for salt-triggered fatty acid accumulation via reallocation of	23
Metabolic engineering of Aspergillus niger via ribonucleoprotein-based CRISPR–Cas9 system for succinic acid production from renewable biomass	23
Pre-concentration of microalga Euglena gracilis by alkalescent pH treatment and flocculation mechanism of Ca3(PO4)2, Mg3(PO4)2, and derivatives	23
Facilely reducing recalcitrance of lignocellulosic biomass by a newly developed ethylamine-based deep eutectic solvent for biobutanol fermentation	23
Co‑cultivation of the anaerobic fungus Caecomyces churrovis with Methanobacterium bryantii enhances transcription of carbohydrate binding modules, dockerins, and pyruvate formate lyases on specific su	23
A thermostable bacterial lytic polysaccharide monooxygenase with high operational stability in a wide temperature range	23
Rational engineering of Saccharomyces cerevisiae towards improved tolerance to multiple inhibitors in lignocellulose fermentations	23
Configuration of active site segments in lytic polysaccharide monooxygenases steers oxidative xyloglucan degradation	22
Effective lipid extraction from undewatered microalgae liquid using subcritical dimethyl ether	22
Rational engineering of xylanase hyper-producing system in Trichoderma reesei for efficient biomass degradation	22
Integrating GWAS, linkage mapping and gene expression analyses reveals the genetic control of growth period traits in rapeseed (Brassica napus L.)	22
Water reuse and growth inhibition mechanisms for cultivation of microalga Euglena gracilis	22
Effects of various inhibitory substances and immobilization on ethanol production efficiency of a thermotolerant Pichia kudriavzevii	22
Engineering of Yarrowia lipolytica transporters for high-efficient production of biobased succinic acid from glucose	22
A comprehensive review on microbial production of 1,2-propanediol: micro-organisms, metabolic pathways, and metabolic engineering	22
Over-expression of an electron transport protein OmcS provides sufficient NADH for d-lactate production in cyanobacterium	22
Novel insights in dimethyl carbonate-based extraction of polyhydroxybutyrate (PHB)	22
Wood-feeding termite gut symbionts as an obscure yet promising source of novel manganese peroxidase-producing oleaginous yeasts intended for azo dye decolorization and biodiesel production	21
Biomass, lipid accumulation kinetics, and the transcriptome of heterotrophic oleaginous microalga Tetradesmus bernardii under different carbon and nitrogen sources	21
THF co-solvent pretreatment prevents lignin redeposition from interfering with enzymes yielding prolonged cellulase activity	21
Acetate as substrate for l-malic acid production with Aspergillus oryzae DSM 1863	21
Repeated batches as a strategy for high 2G ethanol production from undetoxified hemicellulose hydrolysate using immobilized cells of recombinant Saccharomyces cerevisiae in a fixed-bed reactor	21
Enhanced biohydrogen production from cotton stalk hydrolysate of Enterobacter cloacae WL1318 by overexpression of the formate hydrogen lyase activator gene	21
Analysis of the lipid extraction performance in a cascade process for Scenedesmus almeriensis biorefinery	21
ATP and NADPH engineering of Escherichia coli to improve the production of 4-hydroxyphenylacetic acid using CRISPRi	20
Renewable and tuneable bio-LPG blends derived from amino acids	20
In situ measurements of oxidation–reduction potential and hydrogen peroxide concentration as tools for revealing LPMO inactivation during enzymatic saccharification of cellulose	20
Physiological characterization of a new thermotolerant yeast strain isolated during Brazilian ethanol production, and its application in high-temperature fermentation	20
Comparative transcriptome study of switchgrass (Panicum virgatum L.) homologous autopolyploid and its parental amphidiploid responding to consistent drought stress	20
Enhancing methane oxidation in a bioelectrochemical membrane reactor using a soluble electron mediator	20
Enhanced pyruvate metabolism in plastids by overexpression of putative plastidial pyruvate transporter in Phaeodactylum tricornutum	20
Hybrid promoter engineering strategies in Yarrowia lipolytica: isoamyl alcohol production as a test study	19
Genome-scale metabolic modeling underscores the potential of Cutaneotrichosporon oleaginosus ATCC 20509 as a cell factory for biofuel production	19
Novel ethanol production using biomass preprocessing to increase ethanol yield and reduce overall costs	19
Novel xylose transporter Cs4130 expands the sugar uptake repertoire in recombinant Saccharomyces cerevisiae strains at high xylose concentrations	19
Life cycle greenhouse gas emissions of ethanol produced via fermentation of sugars derived from shrub willow (Salix ssp.) hot water extraction in the Northeast United States	19
Importance of suberin biopolymer in plant function, contributions to soil organic carbon and in the production of bio-derived energy and materials	19
Structure-guided steric hindrance engineering of Bacillus badius phenylalanine dehydrogenase for efficient l-homophenylalanine synthesis	19
Identification of enzymatic genes with the potential to reduce biomass recalcitrance through lignin manipulation in Arabidopsis	19
Plasticity engineering of plant monoterpene synthases and application for microbial production of monoterpenoids	19
Metabolic engineering of the oleaginous yeast Yarrowia lipolytica PO1f for production of erythritol from glycerol	19
Exogenous l-proline improved Rhodosporidium toruloides lipid production on crude glycerol	19
Comparison of methodologies used to determine aromatic lignin unit ratios in lignocellulosic biomass	19
Genome-wide association study and transcriptome analysis reveal key genes affecting root growth dynamics in rapeseed	18
Engineering Rhodosporidium toruloides for limonene production	18
Purification and immobilization of engineered glucose dehydrogenase: a new approach to producing gluconic acid from breadwaste	18
Selective delignification of poplar wood with a newly isolated white-rot basidiomycete Peniophora incarnata T-7 by submerged fermentation to enhance saccharification	18
Comparison of various organic acids for xylo-oligosaccharide productions in terms of pKa values and combined severity	18
Process optimization for mass production of 2,3-butanediol by Bacillus subtilis CS13	18
Consolidated bioprocessing of lignocellulose for production of glucaric acid by an artificial microbial consortium	18
cAMP activates calcium signalling via phospholipase C to regulate cellulase production in the filamentous fungus Trichoderma reesei	17
Multiscale analysis of lignocellulose recalcitrance towards OrganoCat pretreatment and fractionation	17
Microbial fuel cell-assisted utilization of glycerol for succinate production by mutant of Actinobacillus succinogenes	17
Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates	17
Overproduction of docosahexaenoic acid in Schizochytrium sp. through genetic engineering of oxidative stress defense pathways	17
ATPase-based implementation of enforced ATP wasting in Saccharomyces cerevisiae for improved ethanol production	17
Dynamic life-cycle carbon analysis for fast pyrolysis biofuel produced from pine residues: implications of carbon temporal effects	17
The Brassica napus fatty acid exporter FAX1-1 contributes to biological yield, seed oil content, and oil quality	17
Monitoring of seven industrial anaerobic digesters supplied with biochar	17
Genomic and transcriptomic analysis of the thermophilic lignocellulose-degrading fungus Thielavia terrestris LPH172	16
The advanced performance of microbial consortium for simultaneous utilization of glucose and xylose to produce lactic acid directly from dilute sulfuric acid pretreated corn stover	16
Improvements of the productivity and saccharification efficiency of the cellulolytic β-glucosidase D2-BGL in Pichia pastoris via directed evolution	16
CRISPRi screens reveal genes modulating yeast growth in lignocellulose hydrolysate	16
Four cellulose-active lytic polysaccharide monooxygenases from Cellulomonas species	16
Overexpression of the rice BAHD acyltransferase AT10 increases xylan-bound p-coumarate and reduces lignin in Sorghum bicolor	16
Using techno-economic modelling to determine the minimum cost possible for a microbial palm oil substitute	16
Targeting hydroxycinnamoyl CoA: shikimate hydroxycinnamoyl transferase for lignin modification in Brachypodium distachyon	16
Using osmotic stress to stabilize mannitol production in Synechocystis sp. PCC6803	16
Insights into the cellulose degradation mechanism of the thermophilic fungus Chaetomium thermophilum based on integrated functional omics	16
A rapid thioacidolysis method for biomass lignin composition and tricin analysis	15

Development of optimal steam explosion pretreatment and highly effective cell factory for bioconversion of grain vinegar residue to butanol	15
Microbial upgrading of acetate into 2,3-butanediol and acetoin by E. coli W	15
Combined whole cell wall analysis and streamlined in silico carbohydrate-active enzyme discovery to improve biocatalytic conversion of agricultural crop residues	15
Rewiring of glycerol metabolism in Escherichia coli for effective production of recombinant proteins	15
Modulating redox metabolism to improve isobutanol production in Shimwellia blattae	15
Protocols for isolating and characterizing polysaccharides from plant cell walls: a case study using rhamnogalacturonan-II	15
A microbubble-sparged yeast propagation–fermentation process for bioethanol production	15
Multi-omics analysis provides insights into lignocellulosic biomass degradation by Laetiporus sulphureus ATCC 52600	15
An emerging simple and effective approach to increase the productivity of thraustochytrids microbial lipids by regulating glycolysis process and triacylglycerols’ decomposition	15
A novel biocatalyst, Enterobacter aerogenes LU2, for efficient production of succinic acid using whey permeate as a cost-effective carbon source	15
Saccharide analysis of onion outer epidermal walls	15
Removal of N-linked glycans in cellobiohydrolase Cel7A from Trichoderma reesei reveals higher activity and binding affinity on crystalline cellulose	15
Colorimetric LPMO assay with direct implication for cellulolytic activity	15
Optimization of carbon source efficiency for lipid production with the oleaginous yeast Saitozyma podzolica DSM 27192 applying automated continuous feeding	15
Discovery of two novel laccase-like multicopper oxidases from Pleurotus citrinopileatus and their application in phenolic oligomer synthesis	15
Gene coexpression network analysis reveals a novel metabolic mechanism of Clostridium acetobutylicum responding to phenolic inhibitors from lignocellulosic hydrolysates	15
Evaluating polymer interplay after hot water pretreatment to investigate maize stem internode recalcitrance	15
Development and characterization of efficient xylose utilization strains of Zymomonas mobilis	15
Coculture with hemicellulose-fermenting microbes reverses inhibition of corn fiber solubilization by Clostridium thermocellum at elevated solids loadings	14
Cellulosic biofuel production using emulsified simultaneous saccharification and fermentation (eSSF) with conventional and thermotolerant yeasts	14
Disruption of alpha-tubulin releases carbon catabolite repression and enhances enzyme production in Trichoderma reesei even in the presence of glucose	14
Production of 10-methyl branched fatty acids in yeast	14
A novel bacterial β-N-acetyl glucosaminidase from Chitinolyticbacter meiyuanensis possessing transglycosylation and reverse hydrolysis activities	14
Alkaline organosolv pretreatment of different sorghum stem parts for enhancing the total reducing sugar yields and p-coumaric acid release	14
Cellulase production and efficient saccharification of biomass by a new mutant Trichoderma afroharzianum MEA-12	14
Low UV-C stress modulates Chlamydomonas reinhardtii biomass composition and oxidative stress response through proteomic and metabolomic changes involving novel signalers and effectors	14
Synthetic biology toolkit for engineering Cupriviadus necator H16 as a platform for CO2 valorization	14
Accessory enzymes of hypercellulolytic Penicillium funiculosum facilitate complete saccharification of sugarcane bagasse	14
Salt stress improves thermotolerance and high-temperature bioethanol production of multi-stress-tolerant Pichia kudriavzevii by stimulating intracellular metabolism and inhibiting oxidative damage	14
Molecular mechanism underlying the effect of maleic hydrazide treatment on starch accumulation in S. polyrrhiza 7498 fronds	14
Bioethanolic yeasts from dung beetles: tapping the potential of extremophilic yeasts for improvement of lignocellulolytic feedstock fermentation	14
Penicillium janthinellum NCIM1366 shows improved biomass hydrolysis and a larger number of CAZymes with higher induction levels over Trichoderma reesei RUT-C30	14
Lipids monitoring in Scenedesmus obliquus based on terahertz technology	14
A novel nanoemulsion-based microalgal growth medium for enhanced biomass production	14
RCO-3 and COL-26 form an external-to-internal module that regulates the dual-affinity glucose transport system in Neurospora crassa	14
In silico screening and experimental analysis of family GH11 xylanases for applications under conditions of alkaline pH and high temperature	14
Down-regulation of OsMYB103L distinctively alters beta-1,4-glucan polymerization and cellulose microfibers assembly for enhanced biomass enzymatic saccharification in rice	14
Improved analysis of arabinoxylan-bound hydroxycinnamate conjugates in grass cell walls	14
Increased expression of fatty acid and ABC transporters enhances seed oil production in camelina	14
Investigation of the impact of a broad range of temperatures on the physiological and transcriptional profiles of Zymomonas mobilis ZM4 for high-temperature-tolerant recombinant strain development	14
Growth-uncoupled isoprenoid synthesis in Rhodobacter sphaeroides	14
Exploring the prospective of weeds (Cannabis sativa L., Parthenium hysterophorus L.) for biofuel production through nanocatalytic (Co, Ni) gasification	14