Epidemics

Papers
(The TQCC of Epidemics is 8. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-05-01 to 2024-05-01.)
ArticleCitations
The early phase of the COVID-19 epidemic in Lombardy, Italy143
The time scale of asymptomatic transmission affects estimates of epidemic potential in the COVID-19 outbreak114
The effects of border control and quarantine measures on the spread of COVID-1959
A wastewater-based epidemic model for SARS-CoV-2 with application to three Canadian cities58
Estimating the generation interval and inferring the latent period of COVID-19 from the contact tracing data55
Modelling the early phase of the Belgian COVID-19 epidemic using a stochastic compartmental model and studying its implied future trajectories54
Estimation of the incubation period of COVID-19 using viral load data44
Memory is key in capturing COVID-19 epidemiological dynamics44
Chopping the tail: How preventing superspreading can help to maintain COVID-19 control39
A model for COVID-19 with isolation, quarantine and testing as control measures34
Challenges for modelling interventions for future pandemics32
Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland32
Assessing the nationwide impact of COVID-19 mitigation policies on the transmission rate of SARS-CoV-2 in Brazil31
Estimated prevalence of undiagnosed HCV infected individuals in Italy: A mathematical model by route of transmission and fibrosis progression30
Noroviruses are highly infectious but there is strong variation in host susceptibility and virus pathogenicity29
Influencing public health policy with data-informed mathematical models of infectious diseases: Recent developments and new challenges29
Impact of vaccination and non-pharmaceutical interventions on SARS-CoV-2 dynamics in Switzerland28
How mechanistic modelling supports decision making for the control of enzootic infectious diseases25
Modeling waning and boosting of COVID-19 in Canada with vaccination23
An evaluation of Hamiltonian Monte Carlo performance to calibrate age-structured compartmental SEIR models to incidence data22
Challenges in modelling the dynamics of infectious diseases at the wildlife–human interface21
The impact of lockdown strategies targeting age groups on the burden of COVID-19 in France21
Designing a typhoid environmental surveillance study: A simulation model for optimum sampling site allocation21
Assessing the efficacy of interventions to control indoor SARS-Cov-2 transmission: An agent-based modeling approach19
Assessing the effects of non-pharmaceutical interventions on SARS-CoV-2 transmission in Belgium by means of an extended SEIQRD model and public mobility data19
COVID-19 Belgium: Extended SEIR-QD model with nursing homes and long-term scenarios-based forecasts19
Determinants of RSV epidemiology following suppression through pandemic contact restrictions18
Challenges in estimation, uncertainty quantification and elicitation for pandemic modelling18
Modelling SARS-CoV-2 transmission in a UK university setting18
Rational evaluation of various epidemic models based on the COVID-19 data of China18
Lessons for preparedness and reasons for concern from the early COVID-19 epidemic in Iran17
To quarantine, or not to quarantine: A theoretical framework for disease control via contact tracing16
COVID-19 outbreak in Wuhan demonstrates the limitations of publicly available case numbers for epidemiological modeling15
Impacts of K-12 school reopening on the COVID-19 epidemic in Indiana, USA15
The impact of social distancing, contact tracing, and case isolation interventions to suppress the COVID-19 epidemic: A modeling study14
A new logistic growth model applied to COVID-19 fatality data14
Appropriately smoothing prevalence data to inform estimates of growth rate and reproduction number14
Social contact patterns among employees in 3 U.S. companies during early phases of the COVID-19 pandemic, April to June 202014
Variability in transmission risk of SARS-CoV-2 in close contact settings: A contact tracing study in Shandong Province, China14
Competition between RSV and influenza: Limits of modelling inference from surveillance data14
Challenges of evaluating and modelling vaccination in emerging infectious diseases14
Quantifying transmission fitness costs of multi-drug resistant tuberculosis14
Nationally representative social contact patterns among U.S. adults, August 2020-April 202113
Optimal allocation of PCR tests to minimise disease transmission through contact tracing and quarantine13
Optimizing COVID-19 control with asymptomatic surveillance testing in a university environment13
Challenges in modeling the emergence of novel pathogens13
Modelling suggests ABO histo-incompatibility may substantially reduce SARS-CoV-2 transmission13
Pseudo-likelihood based logistic regression for estimating COVID-19 infection and case fatality rates by gender, race, and age in California13
Bayesian sequential data assimilation for COVID-19 forecasting13
Mathematical modeling of COVID-19 in British Columbia: An age-structured model with time-dependent contact rates12
How much leeway is there to relax COVID-19 control measures?12
The African swine fever modelling challenge: Model comparison and lessons learnt12
RAMPVIS: Answering the challenges of building visualisation capabilities for large-scale emergency responses11
Modelling the dynamics of infection, waning of immunity and re-infection with the Omicron variant of SARS-CoV-2 in Aotearoa New Zealand11
Optimally pooled viral testing11
Emergence of zoonoses such as COVID-19 reveals the need for health sciences to embrace an explicit eco-social conceptual framework of health and disease10
Estimating COVID-19 cases and deaths prevented by non-pharmaceutical interventions, and the impact of individual actions: A retrospective model-based analysis10
Complementary roles of wild boar and red deer to animal tuberculosis maintenance in multi-host communities10
Quantifying mechanistic traits of influenza viral dynamics using in vitro data10
Mathematical modelling of respiratory syncytial virus (RSV) in low- and middle-income countries: A systematic review10
Communicating uncertainty in epidemic models10
The challenges of data in future pandemics10
Identification and evaluation of epidemic prediction and forecasting reporting guidelines: A systematic review and a call for action10
Challenges on the interaction of models and policy for pandemic control9
Insight into Delta variant dominated second wave of COVID-19 in Nepal9
Investigating the relationship between interventions, contact patterns, and SARS-CoV-2 transmissibility9
Emergence of pertactin-deficient pertussis strains in Australia can be explained by models of vaccine escape9
A quantitative assessment of epidemiological parameters required to investigate COVID-19 burden9
Geospatial clustering and modelling provide policy guidance to distribute funding for active TB case finding in Ethiopia8
Social contacts and other risk factors for respiratory infections among internally displaced people in Somaliland8
Assessing the risk of cascading COVID-19 outbreaks from prison-to-prison transfers8
Network models and the interpretation of prolonged infection plateaus in the COVID19 pandemic8
Estimation of the probability of epidemic fade-out from multiple outbreak data8
A combination of probabilistic and mechanistic approaches for predicting the spread of African swine fever on Merry Island8
Sustaining effective COVID-19 control in Malaysia through large-scale vaccination8
Recalibrating the notion of modelling for policymaking during pandemics8
Dynamic network strategies for SARS-CoV-2 control on a cruise ship8
Bayesian epidemiological modeling over high-resolution network data8
Impact of inter-hospital transfers on the prevalence of resistant pathogens in a hospital–community system8
Tooling-up for infectious disease transmission modelling8
Dynamics of livestock-associated methicillin resistant Staphylococcus aureus in pig movement networks: Insight from mathematical modeling and French data8
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