Epigenetics & Chromatin

Papers
(The TQCC of Epigenetics & Chromatin is 11. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-05-01 to 2026-05-01.)
ArticleCitations
Effects of topological domain disruption on transcriptional regulation are chromatin context dependent66
DNA methylation reshapes the expression of adipokines and adipose factors in white adipose tissues64
The role of genetic diversity, epigenetic regulation, and sex-based differences in HIV cure research: a comprehensive review60
Time-course ATAC-seq and RNA-seq analysis of porcine synovium-derived mesenchymal stem cells under in vitro osteogenic induction45
An optimized approach for multiplexing single-nuclear ATAC-seq using oligonucleotide-conjugated antibodies44
Epigenetic regulation of MED12: a key contributor to the leukemic chromatin landscape and transcriptional dysregulation42
Multilevel interrogation of H3.3 reveals a primordial role in transcription regulation39
Proteins driving liquid-liquid phase separation and histone modifications cooperatively associate with chromatin looping and transcriptional regulation38
Cooperation between architectural C2H2 proteins in CP190 recruitment to Drosophila regulatory elements32
From compartments to loops: understanding the unique chromatin organization in neuronal cells31
Features of DNA methylome in Capsicum spp.28
Local chromatin context informs transcriptional outcomes for the histone demethylase KDM527
Detecting Protein-DNA binding in single molecules using antibody guided methylation27
Co-effects of m6A and chromatin accessibility dynamics in the regulation of cardiomyocyte differentiation27
Mouse Chd4-NURD is required for neonatal spermatogonia survival and normal gonad development25
Acetylation modification of AIM2 by KAT2B suppresses the AKT/Wnt/β-catenin signaling pathway activation and inhibits breast cancer progression23
Partial erosion on under-methylated regions and chromatin reprogramming contribute to oncogene activation in IDH mutant gliomas23
Gain of function p53 mutant R273H confers distinct methylation profiles and consequent YAP/TAZ signaling mediated activation of partial or full EMT states to colon tumours23
Chromatin structure and 3D architecture define the differential functions of PU.1 regulatory elements in blood cell lineages23
Protamine expression in somatic cells condenses chromatin and disrupts transcription without altering DNA methylation23
Mechanistic basis for the opposing effects of H2A and H2B ubiquitination on nucleosome stability and dynamics23
Who’s afraid of the X? Incorporating the X and Y chromosomes into the analysis of DNA methylation array data22
Intrafamily heterooligomerization as an emerging mechanism of methyltransferase regulation21
Chromatin balances cell redox and energy homeostasis21
Heterosis of growth trait regulated by DNA methylation and miRNA in allotriploid fish20
Development of super-specific epigenome editing by targeted allele-specific DNA methylation20
CpG DNA methylation changes during epididymal sperm maturation in bulls20
Analysis of long-range chromatin contacts, compartments and looping between mouse embryonic stem cells, lens epithelium and lens fibers20
Roles of post-translational modifications of UHRF1 in cancer19
Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization18
Manipulating chromatin architecture in C. elegans17
ING5: multifaceted roles beyond tumor suppression in cellular physiology and disease17
Acquired sperm hypomethylation by gestational arsenic exposure is re-established in both the paternal and maternal genomes of post-epigenetic reprogramming embryos17
TP63–TRIM29 axis regulates enhancer methylation and chromosomal instability in prostate cancer17
Multi-omic integration of single-cell data uncovers methylation profiles of super-enhancers in skeletal muscle stem cells17
WDR-5 exhibits H3K4 methylation-independent activity during embryonic development in C. elegans17
Loss of maternal PADI6 disrupts DNA methylation and genomic imprinting maintenance in late preimplantation mouse embryos17
Integrated study of DNA methylation and transcriptome: a new perspective for exploring the pathogenesis of Sjögren's syndrome16
Impact of chromatin on HIV-1 latency: a multi-dimensional perspective16
Native and tagged CENP-A histones are functionally inequivalent16
H3K27me3 and the PRC1-H2AK119ub pathway cooperatively maintain heterochromatin and transcriptional silencing after the loss of H3K9 methylation15
Maternal SMCHD1 controls both imprinted Xist expression and imprinted X chromosome inactivation14
PDS5A and PDS5B differentially affect gene expression without altering cohesin localization across the genome14
The WAC-downWAC domain in the yeast ISW2 nucleosome remodeling complex forms a structural module essential for ISW2 function but not cell viability14
Mechanism of non-coding RNA regulation of DNMT3A13
Reinforcement of repressive marks in the chicken primordial germ cell epigenetic signature: divergence from basal state resetting in mammals13
Structural and functional specificity of H3K36 methylation13
Knockout tales: the versatile roles of histone H3.3 in development and disease13
Epigenetic control of dental stem cells: progress and prospects in multidirectional differentiation13
Histone H3.3 K27M chromatin functions implicate a network of neurodevelopmental factors including ASCL1 and NEUROD1 in DIPG12
Identification of genetic and non-genetic modifiers of genomic imprinting through screening of imprinted DMR methylation in humans12
Investigation of reversible histone acetylation and dynamics in gene expression regulation using 3D liver spheroid model12
Cohesin regulation of genome organization in mature granule neurons in the mouse cerebellum12
Prenatal nicotine exposure leads to epigenetic alterations in peripheral nervous system signaling genes in the testis of the rat12
Multi-omics analyses of MEN1 missense mutations identify disruption of menin–MLL and menin–JunD interactions as critical requirements for molecular pathogenicity12
From chromosomal protein disorder to chromatin phase separation12
Optimizing genetic ancestry adjustment in DNA methylation studies: a comparative analysis of approaches11
Genome-wide DNA methylation patterns in Daphnia magna are not significantly associated with age11
ZAD mediates chromatin binding and insulator activity of Drosophila Pita and can be replaced with the human ZFP276 ZAD-like domain11
Premature ovarian insufficiency is associated with global alterations in the regulatory landscape and gene expression in balanced X-autosome translocations11
Drosophila architectural proteins M1BP and Opbp cooperatively form the active promoter of a ribosomal protein gene11
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